Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38091.t1 | XP_003617999.1 | 98.4 | 485 | 8 | 0 | 1 | 485 | 1 | 485 | 1.10E-192 | 682.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38091.t1 | Q9P775 | 40.3 | 447 | 234 | 9 | 1 | 434 | 3 | 429 | 5.3e-44 | 180.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38091.t1 | G7K4Y5 | 98.4 | 485 | 8 | 0 | 1 | 485 | 1 | 485 | 7.6e-193 | 682.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006974 | MS.gene38091 | PPI |
| MS.gene38091 | MS.gene81208 | PPI |
| MS.gene38070 | MS.gene38091 | PPI |
| MS.gene020906 | MS.gene38091 | PPI |
| MS.gene38091 | MS.gene38190 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38091.t1 | MTR_5g097870 | 97.938 | 485 | 10 | 0 | 1 | 485 | 1 | 485 | 0.0 | 983 |
| MS.gene38091.t1 | MTR_5g097870 | 98.043 | 460 | 9 | 0 | 1 | 460 | 1 | 460 | 0.0 | 931 |
| MS.gene38091.t1 | MTR_2g016160 | 25.778 | 225 | 155 | 3 | 252 | 473 | 62 | 277 | 4.67e-13 | 70.5 |
| MS.gene38091.t1 | MTR_4g096880 | 26.667 | 180 | 116 | 3 | 250 | 420 | 177 | 349 | 4.31e-12 | 68.2 |
| MS.gene38091.t1 | MTR_1g072140 | 25.847 | 236 | 158 | 6 | 242 | 474 | 60 | 281 | 7.34e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38091.t1 | AT4G18905 | 60.563 | 497 | 175 | 8 | 1 | 479 | 1 | 494 | 0.0 | 562 |
| MS.gene38091.t1 | AT4G18905 | 58.185 | 507 | 181 | 8 | 1 | 479 | 1 | 504 | 0.0 | 553 |
| MS.gene38091.t1 | AT4G18900 | 58.405 | 464 | 170 | 7 | 21 | 474 | 5 | 455 | 2.01e-177 | 506 |
| MS.gene38091.t1 | AT4G35370 | 52.609 | 460 | 166 | 7 | 2 | 456 | 3 | 415 | 2.20e-161 | 464 |
| MS.gene38091.t1 | AT1G29260 | 26.613 | 248 | 155 | 6 | 235 | 473 | 47 | 276 | 1.91e-14 | 74.7 |
| MS.gene38091.t1 | AT5G58230 | 28.261 | 184 | 116 | 3 | 246 | 420 | 173 | 349 | 6.41e-14 | 73.9 |
| MS.gene38091.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 275 | 421 | 6.98e-12 | 68.2 |
| MS.gene38091.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.08e-12 | 68.2 |
| MS.gene38091.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 252 | 398 | 7.85e-12 | 68.2 |
| MS.gene38091.t1 | AT5G13480 | 33.333 | 162 | 89 | 7 | 267 | 424 | 264 | 410 | 7.95e-12 | 68.2 |
| MS.gene38091.t1 | AT2G43770 | 26.840 | 231 | 150 | 7 | 250 | 474 | 95 | 312 | 1.88e-11 | 65.9 |
| MS.gene38091.t1 | AT1G71840 | 25.000 | 272 | 160 | 8 | 250 | 483 | 112 | 377 | 3.98e-11 | 65.1 |
| MS.gene38091.t1 | AT4G11110 | 29.878 | 164 | 103 | 4 | 256 | 418 | 777 | 929 | 5.92e-11 | 65.5 |
Find 110 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGACCATCCATTGAAATT+TGG | 0.157308 | 5.1:-78283775 | MS.gene38091:CDS |
| CTGACAAGCGAGTGAAGATT+TGG | 0.281740 | 5.1:-78282244 | MS.gene38091:CDS |
| TTCTTGGCTGTTGGTTCAAT+GGG | 0.292446 | 5.1:-78283794 | MS.gene38091:CDS |
| CTTCTTGGCTGTTGGTTCAA+TGG | 0.294754 | 5.1:-78283795 | MS.gene38091:CDS |
| ATTAGGTGCTGCCGTATTAT+AGG | 0.306215 | 5.1:+78281148 | None:intergenic |
| GGATTTGAGTTATTCAGTTC+GGG | 0.308747 | 5.1:-78284707 | MS.gene38091:CDS |
| GGGACCATCCATTGAAATTT+GGG | 0.330425 | 5.1:-78283774 | MS.gene38091:CDS |
| GCTTCTTGCGACTGGATCTA+TGG | 0.347478 | 5.1:-78281041 | MS.gene38091:CDS |
| TGGCAAAGAGAAAAGGAAAA+AGG | 0.348457 | 5.1:-78283631 | MS.gene38091:CDS |
| GTAAGGACGCCGTCGCATTC+TGG | 0.349631 | 5.1:-78281585 | MS.gene38091:CDS |
| GGAGTATGATTCTGAAGATA+TGG | 0.361330 | 5.1:-78284538 | MS.gene38091:CDS |
| TATGGTAACAGGGAACTTCT+TGG | 0.361380 | 5.1:-78283810 | MS.gene38091:intron |
| CAAGTTCATATCGCGGGTAT+TGG | 0.366174 | 5.1:+78284308 | None:intergenic |
| TCTTCAATTTCATCTTTAGA+AGG | 0.369876 | 5.1:+78287207 | None:intergenic |
| CCCCTTAAAGGAGGAGAAAA+AGG | 0.386260 | 5.1:-78284225 | MS.gene38091:intron |
| AGGATTTGAGTTATTCAGTT+CGG | 0.394366 | 5.1:-78284708 | MS.gene38091:CDS |
| TCTGCTTTCGAAACCCCTTT+CGG | 0.399941 | 5.1:+78287249 | None:intergenic |
| ATTTGTAACAGGTAAAACTT+TGG | 0.407331 | 5.1:-78280932 | MS.gene38091:intron |
| GCACAACATATCCTTCTTAG+TGG | 0.411076 | 5.1:-78281840 | MS.gene38091:CDS |
| GAAGGCATCTCTCGAAAATA+CGG | 0.412196 | 5.1:-78280540 | MS.gene38091:CDS |
| TTTGTAACAGGTAAAACTTT+GGG | 0.415218 | 5.1:-78280931 | MS.gene38091:intron |
| GCTGTGCAAAGTGGAAATTC+CGG | 0.418822 | 5.1:+78284261 | None:intergenic |
| TCACCATGATATCATCATTC+CGG | 0.419784 | 5.1:-78284280 | MS.gene38091:CDS |
| AAGATTTGGGATGTTGTTGC+TGG | 0.420460 | 5.1:-78282230 | MS.gene38091:CDS |
| CACAGGTTCAAGCAGTTGCT+TGG | 0.423769 | 5.1:-78281872 | MS.gene38091:intron |
| AACAGGAATCAACCTCAATC+CGG | 0.434693 | 5.1:-78280510 | MS.gene38091:CDS |
| TTGCTTGGAACAAGGAATAC+AGG | 0.435006 | 5.1:-78282423 | MS.gene38091:intron |
| GAAAATACGGGAAATTCAAC+AGG | 0.436216 | 5.1:-78280527 | MS.gene38091:CDS |
| TGATATTACCGACGCCTTGA+AGG | 0.443645 | 5.1:-78286143 | MS.gene38091:CDS |
| CAATTTCGTGGATTCCGAAA+GGG | 0.447261 | 5.1:-78287263 | MS.gene38091:CDS |
| TTAACCGTAGCTGGTGCAAT+TGG | 0.448209 | 5.1:-78286190 | MS.gene38091:CDS |
| ATCCATGTTGAGATCCTTCA+AGG | 0.448626 | 5.1:+78286129 | None:intergenic |
| GTCATGCAGCTTCTTGCGAC+TGG | 0.450737 | 5.1:-78281049 | MS.gene38091:intron |
| TCTTTAGATGCAACAGAAGA+TGG | 0.451968 | 5.1:+78280891 | None:intergenic |
| ACAGGGAACTTCTTGGCTGT+TGG | 0.465917 | 5.1:-78283803 | MS.gene38091:intron |
| CCTCCGATAGCCAACAAGAA+TGG | 0.466115 | 5.1:+78280688 | None:intergenic |
| TTATGATTGCCGCAATTTCG+TGG | 0.471697 | 5.1:-78287275 | MS.gene38091:CDS |
| ACTCAGTACTTGGTCTTGCT+TGG | 0.472198 | 5.1:-78282438 | MS.gene38091:CDS |
| CTCCGATAGCCAACAAGAAT+GGG | 0.474544 | 5.1:+78280689 | None:intergenic |
| ATCAAGGTCCCAAATTTCAA+TGG | 0.478209 | 5.1:+78283766 | None:intergenic |
| AACCCATTCTTGTTGGCTAT+CGG | 0.479323 | 5.1:-78280691 | MS.gene38091:CDS |
| TTGGCTATCGGAGGCTCAAA+GGG | 0.481198 | 5.1:-78280679 | MS.gene38091:CDS |
| ACAGGAATCAACCTCAATCC+GGG | 0.485663 | 5.1:-78280509 | MS.gene38091:CDS |
| GTTTGATCATACTGTTGCCT+TGG | 0.487656 | 5.1:-78281814 | MS.gene38091:intron |
| AGTCACACCGACTCAGTACT+TGG | 0.488863 | 5.1:-78282448 | MS.gene38091:CDS |
| GACTGGATCTATGGATAAAA+CGG | 0.491616 | 5.1:-78281032 | MS.gene38091:intron |
| TACCTCTGTATCCTATAATA+CGG | 0.501888 | 5.1:-78281159 | MS.gene38091:CDS |
| AAACTTTGCAGAAGGATGTA+AGG | 0.503411 | 5.1:-78281602 | MS.gene38091:intron |
| GGTAGAGCCATGTGTGGTGT+TGG | 0.505588 | 5.1:-78283655 | MS.gene38091:CDS |
| GTAGAGCCATGTGTGGTGTT+GGG | 0.506307 | 5.1:-78283654 | MS.gene38091:CDS |
| GATGTACCTAGTGAGAGTGT+TGG | 0.506656 | 5.1:+78287176 | None:intergenic |
| CTCAATATTATATCAGGCCC+CGG | 0.510053 | 5.1:+78280491 | None:intergenic |
| AATGGATCATCACTCTGATA+AGG | 0.510295 | 5.1:-78282192 | MS.gene38091:intron |
| AGAGGACAACCCATTCTTGT+TGG | 0.510888 | 5.1:-78280698 | MS.gene38091:CDS |
| GCTCATGCTTTAACCGTAGC+TGG | 0.518407 | 5.1:-78286199 | MS.gene38091:CDS |
| TTATATCAGGCCCCGGATTG+AGG | 0.518416 | 5.1:+78280498 | None:intergenic |
| TAGATGCAACAGAAGATGGT+TGG | 0.521703 | 5.1:+78280895 | None:intergenic |
| CAGCGCTGATGTAGAGAGCT+TGG | 0.522228 | 5.1:-78281547 | MS.gene38091:CDS |
| AATTTCGTGGATTCCGAAAG+GGG | 0.523413 | 5.1:-78287262 | MS.gene38091:CDS |
| TGTTGGGTGGCAAAGAGAAA+AGG | 0.525906 | 5.1:-78283638 | MS.gene38091:CDS |
| TGGAAAGTGTACTATTACAA+TGG | 0.526286 | 5.1:-78282210 | MS.gene38091:CDS |
| TTTATACACTTACAACATCA+AGG | 0.526703 | 5.1:+78283750 | None:intergenic |
| GTTGGCTATCGGAGGCTCAA+AGG | 0.527674 | 5.1:-78280680 | MS.gene38091:CDS |
| GAGTTATTCAGTTCGGGGAA+CGG | 0.531807 | 5.1:-78284701 | MS.gene38091:CDS |
| AATTTCCACTTTGCACAGCA+TGG | 0.534774 | 5.1:-78284257 | MS.gene38091:CDS |
| ATTCCGGAATGATGATATCA+TGG | 0.539451 | 5.1:+78284277 | None:intergenic |
| TGACAAGCGAGTGAAGATTT+GGG | 0.543098 | 5.1:-78282243 | MS.gene38091:CDS |
| GATCAAACGAACCACTAAGA+AGG | 0.549508 | 5.1:+78281829 | None:intergenic |
| TCAATTTCATCTTTAGAAGG+AGG | 0.552892 | 5.1:+78287210 | None:intergenic |
| TGGGACACCTTATCTGATGA+AGG | 0.553782 | 5.1:-78280558 | MS.gene38091:CDS |
| AGGTCCCAAATTTCAATGGA+TGG | 0.555988 | 5.1:+78283770 | None:intergenic |
| AGAGATGCCTTCATCAGATA+AGG | 0.558744 | 5.1:+78280551 | None:intergenic |
| CATGGATAACTATGATGAAG+AGG | 0.561882 | 5.1:-78286113 | MS.gene38091:CDS |
| CCATTCTTGTTGGCTATCGG+AGG | 0.565307 | 5.1:-78280688 | MS.gene38091:CDS |
| GAATGGGTTGTCCTCTGAGA+AGG | 0.566271 | 5.1:+78280705 | None:intergenic |
| TTTACCAATTGCACCAGCTA+CGG | 0.566294 | 5.1:+78286186 | None:intergenic |
| TGATGTAGAGAGCTTGGCAT+GGG | 0.570407 | 5.1:-78281541 | MS.gene38091:CDS |
| AATATACAAGTTCATATCGC+GGG | 0.574203 | 5.1:+78284302 | None:intergenic |
| ACTTGGTCTTGCTTGGAACA+AGG | 0.574512 | 5.1:-78282431 | MS.gene38091:CDS |
| CGCCTTGAAGGATCTCAACA+TGG | 0.577123 | 5.1:-78286131 | MS.gene38091:CDS |
| ATTATAGGATACAGAGGTAA+CGG | 0.581773 | 5.1:+78281163 | None:intergenic |
| AAGGCATCTCTCGAAAATAC+GGG | 0.582528 | 5.1:-78280539 | MS.gene38091:CDS |
| TTGCCACCCAACACCACACA+TGG | 0.587638 | 5.1:+78283648 | None:intergenic |
| TTTCGGAATCCACGAAATTG+CGG | 0.589319 | 5.1:+78287266 | None:intergenic |
| CAAACAACAACAGAATCAGT+TGG | 0.589362 | 5.1:+78284498 | None:intergenic |
| GCAATTGGTAAACCATCCAA+TGG | 0.595294 | 5.1:-78286175 | MS.gene38091:CDS |
| GCAATTTCGTGGATTCCGAA+AGG | 0.597881 | 5.1:-78287264 | MS.gene38091:CDS |
| TCAAGCCATGCTGTGCAAAG+TGG | 0.598638 | 5.1:+78284252 | None:intergenic |
| ACAAAAGAGTGCTCAGTGTG+TGG | 0.598926 | 5.1:+78281516 | None:intergenic |
| CAGTCCGAACATCAAAACAT+TGG | 0.599001 | 5.1:+78281246 | None:intergenic |
| GAAATCAACAAAATACAAAG+AGG | 0.602238 | 5.1:-78282473 | MS.gene38091:CDS |
| TGTTAGGTGAGTCTTGAAGA+TGG | 0.604591 | 5.1:-78281275 | MS.gene38091:intron |
| GAGCCATGTGTGGTGTTGGG+TGG | 0.607120 | 5.1:-78283651 | MS.gene38091:CDS |
| CTGATGTAGAGAGCTTGGCA+TGG | 0.610832 | 5.1:-78281542 | MS.gene38091:CDS |
| TCATCTCCAACACTCTCACT+AGG | 0.616650 | 5.1:-78287182 | MS.gene38091:intron |
| TGTTGTTTGTGCGCGTACTG+AGG | 0.617359 | 5.1:-78284484 | MS.gene38091:CDS |
| GTTGAGATCCTTCAAGGCGT+CGG | 0.622922 | 5.1:+78286135 | None:intergenic |
| AGTAGCATTCTGCACAGATG+TGG | 0.625228 | 5.1:+78281211 | None:intergenic |
| ATTCTGCACAGATGTGGCAT+TGG | 0.628001 | 5.1:+78281217 | None:intergenic |
| GAATATACAAGTTCATATCG+CGG | 0.630543 | 5.1:+78284301 | None:intergenic |
| GCATTCTGGCTATACGTGGT+CGG | 0.636465 | 5.1:-78281571 | MS.gene38091:CDS |
| AGCAAGACCAAGTACTGAGT+CGG | 0.637057 | 5.1:+78282441 | None:intergenic |
| CACGTATAGCCAGAATGCGA+CGG | 0.645659 | 5.1:+78281576 | None:intergenic |
| GATTTGAGTTATTCAGTTCG+GGG | 0.646430 | 5.1:-78284706 | MS.gene38091:CDS |
| CGTCGCATTCTGGCTATACG+TGG | 0.650851 | 5.1:-78281575 | MS.gene38091:CDS |
| CTGGCAGGTATGGATACTTG+AGG | 0.666889 | 5.1:-78284334 | MS.gene38091:intron |
| CAGGAATCAACCTCAATCCG+GGG | 0.674342 | 5.1:-78280508 | MS.gene38091:CDS |
| TATGATGAAGAGGATGACAA+AGG | 0.685139 | 5.1:-78286103 | MS.gene38091:intron |
| TGCCGTATTATAGGATACAG+AGG | 0.687331 | 5.1:+78281157 | None:intergenic |
| TGATGAGGTAGAGCCATGTG+TGG | 0.762909 | 5.1:-78283661 | MS.gene38091:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTT+TGG | - | chr5.1:78287010-78287029 | MS.gene38091:intron | 0.0% |
| !!! | ATGTAATTTATATGTTTTTA+AGG | - | chr5.1:78283214-78283233 | MS.gene38091:intron | 10.0% |
| !! | AAAAAAATCCTTGTTAAATA+GGG | + | chr5.1:78284060-78284079 | None:intergenic | 15.0% |
| !! | AAAACTTATAAGATGAAAAT+GGG | - | chr5.1:78281038-78281057 | MS.gene38091:CDS | 15.0% |
| !! | AAACAATTTAAATAAGTCAA+GGG | + | chr5.1:78285843-78285862 | None:intergenic | 15.0% |
| !! | ATAATAAATAAAACTAACGA+GGG | + | chr5.1:78286396-78286415 | None:intergenic | 15.0% |
| !! | ATCTTAAAATAGTTTCATTA+TGG | - | chr5.1:78283948-78283967 | MS.gene38091:intron | 15.0% |
| !! | CAATAATAATTAATACAAGA+TGG | + | chr5.1:78281492-78281511 | None:intergenic | 15.0% |
| !! | TAAAACTTATAAGATGAAAA+TGG | - | chr5.1:78281037-78281056 | MS.gene38091:CDS | 15.0% |
| !! | TATAATAAATAAAACTAACG+AGG | + | chr5.1:78286397-78286416 | None:intergenic | 15.0% |
| !! | TTTAAATGCTTCATTAATTA+CGG | - | chr5.1:78285681-78285700 | MS.gene38091:intron | 15.0% |
| !!! | ATCAAGTTTTAATACAAAAA+TGG | + | chr5.1:78285232-78285251 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTAACTAACTTT+TGG | - | chr5.1:78284968-78284987 | MS.gene38091:intron | 15.0% |
| !!! | TAATTTATATGTTTTTAAGG+AGG | - | chr5.1:78283217-78283236 | MS.gene38091:intron | 15.0% |
| !!! | TTTTACAAATTACTTAAGAA+AGG | + | chr5.1:78285798-78285817 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACAGAAGTTGT+CGG | + | chr5.1:78287000-78287019 | None:intergenic | 20.0% |
| !! | AAATTACATATTCTATACAG+AGG | - | chr5.1:78281170-78281189 | MS.gene38091:CDS | 20.0% |
| !! | AATAATTATACAAGAAAACG+AGG | + | chr5.1:78285076-78285095 | None:intergenic | 20.0% |
| !! | AATTACATATTCTATACAGA+GGG | - | chr5.1:78281171-78281190 | MS.gene38091:CDS | 20.0% |
| !! | ATAATTATACAAGAAAACGA+GGG | + | chr5.1:78285075-78285094 | None:intergenic | 20.0% |
| !! | ATATACTTTAAATAGCTGAA+AGG | + | chr5.1:78282526-78282545 | None:intergenic | 20.0% |
| !! | ATTAAGTAAAATTAGTACAC+AGG | + | chr5.1:78286310-78286329 | None:intergenic | 20.0% |
| !! | CAAAAAAATCCTTGTTAAAT+AGG | + | chr5.1:78284061-78284080 | None:intergenic | 20.0% |
| !! | CAAACAATTTAAATAAGTCA+AGG | + | chr5.1:78285844-78285863 | None:intergenic | 20.0% |
| !! | CTGTTTGAAAATTTAAATGT+TGG | - | chr5.1:78284318-78284337 | MS.gene38091:CDS | 20.0% |
| !! | TAATAAATAAAACTAACGAG+GGG | + | chr5.1:78286395-78286414 | None:intergenic | 20.0% |
| !! | TACAATAGAGATATATAGTA+GGG | + | chr5.1:78286937-78286956 | None:intergenic | 20.0% |
| !! | TCTGTATAGAATATGTAATT+TGG | + | chr5.1:78281171-78281190 | None:intergenic | 20.0% |
| !! | TTAAGTGTTAAATACAGATT+CGG | + | chr5.1:78281450-78281469 | None:intergenic | 20.0% |
| !! | TTACAATAGAGATATATAGT+AGG | + | chr5.1:78286938-78286957 | None:intergenic | 20.0% |
| !!! | AATTTCCAATTTTGTTTTCT+TGG | - | chr5.1:78286438-78286457 | MS.gene38091:intron | 20.0% |
| !!! | ATCTAATTATTTTGCAGTTA+TGG | - | chr5.1:78287198-78287217 | MS.gene38091:CDS | 20.0% |
| !!! | ATTTTTTCTCATGATATATC+AGG | - | chr5.1:78283048-78283067 | MS.gene38091:intron | 20.0% |
| !!! | TCTAATTATTTTGCAGTTAT+GGG | - | chr5.1:78287199-78287218 | MS.gene38091:CDS | 20.0% |
| !!! | TTATAAGTTTTAATCGCTTA+TGG | + | chr5.1:78281029-78281048 | None:intergenic | 20.0% |
| !!! | TTGGTATTTTTCTCTTTTAA+GGG | - | chr5.1:78281061-78281080 | MS.gene38091:intron | 20.0% |
| !!! | TTGTGTATTATTTTTTGTAG+AGG | - | chr5.1:78281264-78281283 | MS.gene38091:CDS | 20.0% |
| !!! | TTTGGATTTTGATTAGTATT+TGG | - | chr5.1:78284986-78285005 | MS.gene38091:intron | 20.0% |
| !!! | TTTTTATCAGAGTAATGAAT+TGG | - | chr5.1:78283104-78283123 | MS.gene38091:intron | 20.0% |
| !!! | TTTTTTTTTGGTGTTTGTTA+GGG | - | chr5.1:78287031-78287050 | MS.gene38091:intron | 20.0% |
| !!! | TTTTTTTTTTGGTGTTTGTT+AGG | - | chr5.1:78287030-78287049 | MS.gene38091:intron | 20.0% |
| ! | AAAGTTCTATATTGTTGACA+AGG | - | chr5.1:78285756-78285775 | MS.gene38091:intron | 25.0% |
| ! | AAATGTAAAAGAAATGGATG+AGG | + | chr5.1:78282392-78282411 | None:intergenic | 25.0% |
| ! | AAGATAATAAGATGATGCAA+AGG | + | chr5.1:78283933-78283952 | None:intergenic | 25.0% |
| ! | AATAAGAAGACTAATACTTG+AGG | - | chr5.1:78283799-78283818 | MS.gene38091:CDS | 25.0% |
| ! | AATAGTTTCATTATGGTAAC+AGG | - | chr5.1:78283955-78283974 | MS.gene38091:intron | 25.0% |
| ! | AATATTGCAAACAAAGTGTA+AGG | + | chr5.1:78286051-78286070 | None:intergenic | 25.0% |
| ! | AATGATTTAATTGTCCTGTT+AGG | - | chr5.1:78286485-78286504 | MS.gene38091:intron | 25.0% |
| ! | ACTATTTCAATGTAACACAA+TGG | - | chr5.1:78282561-78282580 | MS.gene38091:intron | 25.0% |
| ! | AGTGTTATAAAAACATAGAC+AGG | + | chr5.1:78284552-78284571 | None:intergenic | 25.0% |
| ! | AGTTTCAATTATGAATGAAG+AGG | + | chr5.1:78280638-78280657 | None:intergenic | 25.0% |
| ! | ATAGTTTCATTATGGTAACA+GGG | - | chr5.1:78283956-78283975 | MS.gene38091:intron | 25.0% |
| ! | ATTTGTAACAGGTAAAACTT+TGG | - | chr5.1:78286844-78286863 | MS.gene38091:intron | 25.0% |
| ! | ATTTGTCCCCAATATAAAAA+TGG | - | chr5.1:78281230-78281249 | MS.gene38091:CDS | 25.0% |
| ! | CAAATAAAACCATTATGTTC+AGG | + | chr5.1:78285427-78285446 | None:intergenic | 25.0% |
| ! | CAAATAATGTGGAATCTAAT+TGG | - | chr5.1:78282149-78282168 | MS.gene38091:intron | 25.0% |
| ! | CAATTAGATTCCACATTATT+TGG | + | chr5.1:78282151-78282170 | None:intergenic | 25.0% |
| ! | CTAAAAGCAACTATTTAAGT+AGG | + | chr5.1:78284774-78284793 | None:intergenic | 25.0% |
| ! | GAAATCAACAAAATACAAAG+AGG | - | chr5.1:78285303-78285322 | MS.gene38091:intron | 25.0% |
| ! | GTATAAATATAAGCAGCATA+AGG | + | chr5.1:78283026-78283045 | None:intergenic | 25.0% |
| ! | GTATTCCTGATTATATTCTT+AGG | + | chr5.1:78282443-78282462 | None:intergenic | 25.0% |
| ! | GTGAGTAGTCAATAAAATTT+GGG | - | chr5.1:78280989-78281008 | MS.gene38091:intron | 25.0% |
| ! | TAGATCCAAGAAAACAAAAT+TGG | + | chr5.1:78286446-78286465 | None:intergenic | 25.0% |
| ! | TCAACCACCATAAAATTATT+TGG | - | chr5.1:78284209-78284228 | MS.gene38091:intron | 25.0% |
| ! | TCCATAAGCTACAAATTAAA+CGG | - | chr5.1:78282964-78282983 | MS.gene38091:intron | 25.0% |
| ! | TCTTCAATTTCATCTTTAGA+AGG | + | chr5.1:78280572-78280591 | None:intergenic | 25.0% |
| ! | TGTGAGTAGTCAATAAAATT+TGG | - | chr5.1:78280988-78281007 | MS.gene38091:intron | 25.0% |
| ! | TTAAGAATACCTGAAGTTAA+AGG | + | chr5.1:78287154-78287173 | None:intergenic | 25.0% |
| ! | TTCTTTGCAAGTAAAATGTA+GGG | - | chr5.1:78283658-78283677 | MS.gene38091:CDS | 25.0% |
| ! | TTTATACACTTACAACATCA+AGG | + | chr5.1:78284029-78284048 | None:intergenic | 25.0% |
| ! | TTTCTTTGCAAGTAAAATGT+AGG | - | chr5.1:78283657-78283676 | MS.gene38091:CDS | 25.0% |
| ! | TTTGTAACAGGTAAAACTTT+GGG | - | chr5.1:78286845-78286864 | MS.gene38091:intron | 25.0% |
| !! | ACATTTTACTTGCAAAGAAA+TGG | + | chr5.1:78283657-78283676 | None:intergenic | 25.0% |
| !! | ACATTTTTATCGTTGATGTA+TGG | + | chr5.1:78283132-78283151 | None:intergenic | 25.0% |
| !! | ATCCATTTCTTTTACATTTG+AGG | - | chr5.1:78282393-78282412 | MS.gene38091:intron | 25.0% |
| !! | ATTTGGTATTATTTCTTGTC+AGG | + | chr5.1:78281154-78281173 | None:intergenic | 25.0% |
| !! | GAGGTAACCAAATAATTTTA+TGG | + | chr5.1:78284219-78284238 | None:intergenic | 25.0% |
| !! | GTAACCAAATAATTTTATGG+TGG | + | chr5.1:78284216-78284235 | None:intergenic | 25.0% |
| !! | GTTGGTATTTTTCTCTTTTA+AGG | - | chr5.1:78281060-78281079 | MS.gene38091:intron | 25.0% |
| !! | GTTTTACCTGTTACAAATAA+TGG | + | chr5.1:78286842-78286861 | None:intergenic | 25.0% |
| !! | TCCATTTCTTTTACATTTGA+GGG | - | chr5.1:78282394-78282413 | MS.gene38091:intron | 25.0% |
| !! | TTTACTTGATACTTGTTGAT+GGG | - | chr5.1:78283592-78283611 | MS.gene38091:intron | 25.0% |
| !! | TTTGAAGTTTAGCTATCTAA+TGG | - | chr5.1:78286138-78286157 | MS.gene38091:CDS | 25.0% |
| !! | TTTGGTATTATTTCTTGTCA+GGG | + | chr5.1:78281153-78281172 | None:intergenic | 25.0% |
| !! | TTTTTGTAGAGGACTAAATT+GGG | - | chr5.1:78281275-78281294 | MS.gene38091:intron | 25.0% |
| !!! | AATATCATCACTTTTTCCAT+TGG | + | chr5.1:78281620-78281639 | None:intergenic | 25.0% |
| !!! | ACATTTTTTTGTACGACTAA+GGG | + | chr5.1:78282269-78282288 | None:intergenic | 25.0% |
| !!! | AGTCTCTACCATTTTTATAT+TGG | + | chr5.1:78281241-78281260 | None:intergenic | 25.0% |
| !!! | ATTGATCATCTTTTGACTTT+TGG | - | chr5.1:78284938-78284957 | MS.gene38091:intron | 25.0% |
| !!! | GAATACAGGTTTGTTAAATT+TGG | - | chr5.1:78285367-78285386 | MS.gene38091:intron | 25.0% |
| !!! | GTCTCTACCATTTTTATATT+GGG | + | chr5.1:78281240-78281259 | None:intergenic | 25.0% |
| !!! | TACATTTTTTTGTACGACTA+AGG | + | chr5.1:78282270-78282289 | None:intergenic | 25.0% |
| !!! | TCTCTACCATTTTTATATTG+GGG | + | chr5.1:78281239-78281258 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCTTGGATCTAA+AGG | - | chr5.1:78286447-78286466 | MS.gene38091:intron | 25.0% |
| !!! | TTTTTTGTAGAGGACTAAAT+TGG | - | chr5.1:78281274-78281293 | MS.gene38091:intron | 25.0% |
| !!! | TTTTTTTTGGTGTTTGTTAG+GGG | - | chr5.1:78287032-78287051 | MS.gene38091:intron | 25.0% |
| AAAAATAAACCAATCCGAAC+AGG | - | chr5.1:78280940-78280959 | MS.gene38091:intron | 30.0% | |
| AAAAGGAAAAAGGGGAAAAA+TGG | - | chr5.1:78284155-78284174 | MS.gene38091:intron | 30.0% | |
| AAAATTATGAAGGACCAAAC+TGG | - | chr5.1:78281305-78281324 | MS.gene38091:intron | 30.0% | |
| AAAGGAAAAAGGGGAAAAAT+GGG | - | chr5.1:78284156-78284175 | MS.gene38091:intron | 30.0% | |
| AAATTATGAAGGACCAAACT+GGG | - | chr5.1:78281306-78281325 | MS.gene38091:intron | 30.0% | |
| AAGTTGGAACCAAATAATGT+GGG | + | chr5.1:78284402-78284421 | None:intergenic | 30.0% | |
| AATAGCTGAAAGGTTAATTG+CGG | + | chr5.1:78282516-78282535 | None:intergenic | 30.0% | |
| AATATACAAGTTCATATCGC+GGG | + | chr5.1:78283477-78283496 | None:intergenic | 30.0% | |
| ACAATAGAGCAAAATGTACT+TGG | + | chr5.1:78284889-78284908 | None:intergenic | 30.0% | |
| ACTACACTTACCAAATAATG+TGG | - | chr5.1:78282138-78282157 | MS.gene38091:intron | 30.0% | |
| AGTAAAGAACTCATAGGATT+TGG | + | chr5.1:78283578-78283597 | None:intergenic | 30.0% | |
| ATCTTCAATTCATGTTCACA+AGG | + | chr5.1:78283352-78283371 | None:intergenic | 30.0% | |
| ATGAGTTAAAGATAGATGGA+TGG | + | chr5.1:78281711-78281730 | None:intergenic | 30.0% | |
| ATTATAGGATACAGAGGTAA+CGG | + | chr5.1:78286616-78286635 | None:intergenic | 30.0% | |
| ATTATTGCTTATTGCAGTGT+AGG | - | chr5.1:78281505-78281524 | MS.gene38091:intron | 30.0% | |
| ATTCATAAGGTTTGTAGTGT+TGG | + | chr5.1:78282891-78282910 | None:intergenic | 30.0% | |
| CAATTTAAATAAGTCAAGGG+CGG | + | chr5.1:78285840-78285859 | None:intergenic | 30.0% | |
| CTAGATTTACCAACAACAAA+TGG | - | chr5.1:78285144-78285163 | MS.gene38091:intron | 30.0% | |
| CTTATAAGATGAAAATGGGT+TGG | - | chr5.1:78281042-78281061 | MS.gene38091:CDS | 30.0% | |
| GAAAAATTGGATCATTACCA+AGG | + | chr5.1:78285982-78286001 | None:intergenic | 30.0% | |
| GAATATACAAGTTCATATCG+CGG | + | chr5.1:78283478-78283497 | None:intergenic | 30.0% | |
| GGAAAAACTATGATAAACCA+AGG | + | chr5.1:78283005-78283024 | None:intergenic | 30.0% | |
| GTATCAAGTAAAGAACTCAT+AGG | + | chr5.1:78283584-78283603 | None:intergenic | 30.0% | |
| GTGAATGAGTTAAAGATAGA+TGG | + | chr5.1:78281715-78281734 | None:intergenic | 30.0% | |
| GTGTTAATAAACTTTGCAGA+AGG | - | chr5.1:78286166-78286185 | MS.gene38091:CDS | 30.0% | |
| GTGTTGAAGATACATACATT+AGG | + | chr5.1:78286648-78286667 | None:intergenic | 30.0% | |
| TACATGTGTCTATGTAATGT+CGG | + | chr5.1:78281894-78281913 | None:intergenic | 30.0% | |
| TACCTCTGTATCCTATAATA+CGG | - | chr5.1:78286617-78286636 | MS.gene38091:intron | 30.0% | |
| TAGAATATGAATGCACAACT+TGG | + | chr5.1:78282222-78282241 | None:intergenic | 30.0% | |
| TAGACACATGTAGTTACATT+TGG | - | chr5.1:78281902-78281921 | MS.gene38091:intron | 30.0% | |
| TCCCTCAAATGTAAAAGAAA+TGG | + | chr5.1:78282398-78282417 | None:intergenic | 30.0% | |
| TTACTGCCATTATTTGTAAC+AGG | - | chr5.1:78286833-78286852 | MS.gene38091:intron | 30.0% | |
| TTCCTGATTATATTCTTAGG+TGG | + | chr5.1:78282440-78282459 | None:intergenic | 30.0% | |
| TTCTTGTCAGGGAATAAATT+GGG | + | chr5.1:78281142-78281161 | None:intergenic | 30.0% | |
| TTTCTTGTCAGGGAATAAAT+TGG | + | chr5.1:78281143-78281162 | None:intergenic | 30.0% | |
| ! | AACATGAACTGTCATGTTTT+TGG | + | chr5.1:78283739-78283758 | None:intergenic | 30.0% |
| ! | AAGAAAAAACTGACAGCTTT+TGG | + | chr5.1:78286912-78286931 | None:intergenic | 30.0% |
| ! | AGAATCCAGAATCCAAATTT+TGG | + | chr5.1:78284810-78284829 | None:intergenic | 30.0% |
| ! | AGGATTTGAGTTATTCAGTT+CGG | - | chr5.1:78283068-78283087 | MS.gene38091:intron | 30.0% |
| ! | ATGTTAGAATGTCCATTTTC+TGG | - | chr5.1:78281350-78281369 | MS.gene38091:intron | 30.0% |
| ! | CTGTAATGTTTTATGCAGTT+TGG | - | chr5.1:78283619-78283638 | MS.gene38091:CDS | 30.0% |
| ! | CTTTACTTGATACTTGTTGA+TGG | - | chr5.1:78283591-78283610 | MS.gene38091:intron | 30.0% |
| ! | TACATTTTGCTCTATTGTCA+GGG | - | chr5.1:78284891-78284910 | MS.gene38091:intron | 30.0% |
| ! | TCAATTTCATCTTTAGAAGG+AGG | + | chr5.1:78280569-78280588 | None:intergenic | 30.0% |
| ! | TCCAATTTTTCCTTGTTACT+TGG | - | chr5.1:78285991-78286010 | MS.gene38091:intron | 30.0% |
| ! | TCTGAAACATCGTTATCAAA+TGG | + | chr5.1:78280714-78280733 | None:intergenic | 30.0% |
| ! | TGGAAAGTGTACTATTACAA+TGG | - | chr5.1:78285566-78285585 | MS.gene38091:intron | 30.0% |
| ! | TGTATAAAAAGCGTAAACAC+TGG | - | chr5.1:78282480-78282499 | MS.gene38091:intron | 30.0% |
| ! | TTTTCTGATCATGAGTTTAC+TGG | + | chr5.1:78282117-78282136 | None:intergenic | 30.0% |
| !! | AAGAGATTTCCATTTGTTGT+TGG | + | chr5.1:78285156-78285175 | None:intergenic | 30.0% |
| !! | ATTTTTCTCTTTTAAGGGAC+TGG | - | chr5.1:78281066-78281085 | MS.gene38091:intron | 30.0% |
| !! | GTCTTTTTCACTCTCAAATA+AGG | - | chr5.1:78284599-78284618 | MS.gene38091:intron | 30.0% |
| !! | TGTTTTTCAGTTGCATTAGT+AGG | - | chr5.1:78282667-78282686 | MS.gene38091:intron | 30.0% |
| !!! | GGATTTTGATTAGTATTTGG+TGG | - | chr5.1:78284989-78285008 | MS.gene38091:intron | 30.0% |
| !!! | TTTTTTTGGTGTTTGTTAGG+GGG | - | chr5.1:78287033-78287052 | MS.gene38091:intron | 30.0% |
| AAACCATTAGGCTCCATTTA+GGG | + | chr5.1:78284682-78284701 | None:intergenic | 35.0% | |
| AAACTTTGCAGAAGGATGTA+AGG | - | chr5.1:78286174-78286193 | MS.gene38091:CDS | 35.0% | |
| AAAGGGGAAAAATGGGAAAA+AGG | - | chr5.1:78284163-78284182 | MS.gene38091:intron | 35.0% | |
| AAGCTCTTCACTTAAAGTCT+TGG | - | chr5.1:78281377-78281396 | MS.gene38091:intron | 35.0% | |
| AATACCATCCACAAACTAGA+AGG | + | chr5.1:78284849-78284868 | None:intergenic | 35.0% | |
| AATGGATCATCACTCTGATA+AGG | - | chr5.1:78285584-78285603 | MS.gene38091:intron | 35.0% | |
| ACAAAATCACCGTAATGTGA+GGG | - | chr5.1:78284472-78284491 | MS.gene38091:CDS | 35.0% | |
| AGCTCTTCACTTAAAGTCTT+GGG | - | chr5.1:78281378-78281397 | MS.gene38091:intron | 35.0% | |
| AGGGAACACAAAAACTGTAT+TGG | - | chr5.1:78284491-78284510 | MS.gene38091:CDS | 35.0% | |
| AGTTGGAACCAAATAATGTG+GGG | + | chr5.1:78284401-78284420 | None:intergenic | 35.0% | |
| ATACATGAAAAGGATGGCAA+TGG | + | chr5.1:78281426-78281445 | None:intergenic | 35.0% | |
| ATCAAGGTCCCAAATTTCAA+TGG | + | chr5.1:78284013-78284032 | None:intergenic | 35.0% | |
| ATTAAACGGCTTATCCAAAC+AGG | - | chr5.1:78282978-78282997 | MS.gene38091:intron | 35.0% | |
| ATTCCGGAATGATGATATCA+TGG | + | chr5.1:78283502-78283521 | None:intergenic | 35.0% | |
| CAAACAACAACAGAATCAGT+TGG | + | chr5.1:78283281-78283300 | None:intergenic | 35.0% | |
| CAAATTACAGAATCAGCAAG+AGG | + | chr5.1:78285273-78285292 | None:intergenic | 35.0% | |
| CAGATTCGGAATACATGAAA+AGG | + | chr5.1:78281436-78281455 | None:intergenic | 35.0% | |
| CATGGATAACTATGATGAAG+AGG | - | chr5.1:78281663-78281682 | MS.gene38091:intron | 35.0% | |
| CTATGCTTTCCTGAACATAA+TGG | - | chr5.1:78285415-78285434 | MS.gene38091:intron | 35.0% | |
| CTGTAATGTAATACCAAACC+TGG | - | chr5.1:78282054-78282073 | MS.gene38091:intron | 35.0% | |
| GAAAATACGGGAAATTCAAC+AGG | - | chr5.1:78287249-78287268 | MS.gene38091:CDS | 35.0% | |
| GAACACAAAAACTGTATTGG+AGG | - | chr5.1:78284494-78284513 | MS.gene38091:CDS | 35.0% | |
| GAAGTTGGAACCAAATAATG+TGG | + | chr5.1:78284403-78284422 | None:intergenic | 35.0% | |
| GACTGGATCTATGGATAAAA+CGG | - | chr5.1:78286744-78286763 | MS.gene38091:intron | 35.0% | |
| GCAAAGAGAAAAGGAAAAAG+GGG | - | chr5.1:78284147-78284166 | MS.gene38091:intron | 35.0% | |
| GCCAAGTAACAAGGAAAAAT+TGG | + | chr5.1:78285995-78286014 | None:intergenic | 35.0% | |
| GGAACTCAAAAAATGGGAAA+AGG | + | chr5.1:78284379-78284398 | None:intergenic | 35.0% | |
| GGCAAAGAGAAAAGGAAAAA+GGG | - | chr5.1:78284146-78284165 | MS.gene38091:intron | 35.0% | |
| GTCAAACTCAAAAGATGTCA+AGG | + | chr5.1:78285468-78285487 | None:intergenic | 35.0% | |
| GTGGAATCTAATTGGTAAAG+AGG | - | chr5.1:78282157-78282176 | MS.gene38091:intron | 35.0% | |
| TAACAAAACCATGCAAGTGT+TGG | + | chr5.1:78283165-78283184 | None:intergenic | 35.0% | |
| TACTCCTTCAACTTGAATGT+GGG | - | chr5.1:78284430-78284449 | MS.gene38091:intron | 35.0% | |
| TAGTATGCAGCTACTCAATA+TGG | + | chr5.1:78284723-78284742 | None:intergenic | 35.0% | |
| TATGATGAAGAGGATGACAA+AGG | - | chr5.1:78281673-78281692 | MS.gene38091:intron | 35.0% | |
| TATTACATGTTTATCTGCCC+TGG | - | chr5.1:78283423-78283442 | MS.gene38091:intron | 35.0% | |
| TCACCATGATATCATCATTC+CGG | - | chr5.1:78283496-78283515 | MS.gene38091:intron | 35.0% | |
| TCTTTAGATGCAACAGAAGA+TGG | + | chr5.1:78286888-78286907 | None:intergenic | 35.0% | |
| TGCCACCTAAGAATATAATC+AGG | - | chr5.1:78282435-78282454 | MS.gene38091:CDS | 35.0% | |
| TGGCAAAGAGAAAAGGAAAA+AGG | - | chr5.1:78284145-78284164 | MS.gene38091:intron | 35.0% | |
| TGTAGAAAAGCCAAGTAACA+AGG | + | chr5.1:78286004-78286023 | None:intergenic | 35.0% | |
| TGTTGTTGCCCTATTTAACA+AGG | - | chr5.1:78284049-78284068 | MS.gene38091:intron | 35.0% | |
| TTAAACGGCTTATCCAAACA+GGG | - | chr5.1:78282979-78282998 | MS.gene38091:intron | 35.0% | |
| TTCGGAATACATGAAAAGGA+TGG | + | chr5.1:78281432-78281451 | None:intergenic | 35.0% | |
| ! | AAAGTTTTGCACCTAAACCA+AGG | + | chr5.1:78282024-78282043 | None:intergenic | 35.0% |
| ! | AAGAGCTTTTGACCAGAAAA+TGG | + | chr5.1:78281365-78281384 | None:intergenic | 35.0% |
| ! | ACCTTTTTCTCCTCCTTTAA+GGG | + | chr5.1:78283555-78283574 | None:intergenic | 35.0% |
| ! | ATGTGGATTGAAAGACATCA+TGG | + | chr5.1:78285879-78285898 | None:intergenic | 35.0% |
| ! | CTTTTGTTCTCAGATTGATG+AGG | - | chr5.1:78284100-78284119 | MS.gene38091:intron | 35.0% |
| ! | GATTTGAGTTATTCAGTTCG+GGG | - | chr5.1:78283070-78283089 | MS.gene38091:intron | 35.0% |
| ! | GGAGTATGATTCTGAAGATA+TGG | - | chr5.1:78283238-78283257 | MS.gene38091:intron | 35.0% |
| ! | GGATTTGAGTTATTCAGTTC+GGG | - | chr5.1:78283069-78283088 | MS.gene38091:intron | 35.0% |
| ! | GGTCCTTCATAATTTTCTTG+TGG | + | chr5.1:78281301-78281320 | None:intergenic | 35.0% |
| ! | GTACATTTTGCTCTATTGTC+AGG | - | chr5.1:78284890-78284909 | MS.gene38091:intron | 35.0% |
| ! | TAAAAAGCGTAAACACTGGT+AGG | - | chr5.1:78282484-78282503 | MS.gene38091:intron | 35.0% |
| ! | TGTTGTTGGTAAATCTAGCT+TGG | + | chr5.1:78285142-78285161 | None:intergenic | 35.0% |
| ! | TTTTGTGTTCCCTCACATTA+CGG | + | chr5.1:78284484-78284503 | None:intergenic | 35.0% |
| !! | AAATTGTGACGGACCATAAT+GGG | + | chr5.1:78281111-78281130 | None:intergenic | 35.0% |
| !! | CATATCTACCTTCTAGTTTG+TGG | - | chr5.1:78284838-78284857 | MS.gene38091:intron | 35.0% |
| !! | CTCTTGCTGATTCTGTAATT+TGG | - | chr5.1:78285271-78285290 | MS.gene38091:intron | 35.0% |
| !! | GCCGTTTAATTTGTAGCTTA+TGG | + | chr5.1:78282968-78282987 | None:intergenic | 35.0% |
| !! | TAAATTGTGACGGACCATAA+TGG | + | chr5.1:78281112-78281131 | None:intergenic | 35.0% |
| !! | TGCTGATTCTGTAATTTGGT+TGG | - | chr5.1:78285275-78285294 | MS.gene38091:intron | 35.0% |
| !!! | ACACTTGCATGGTTTTGTTA+AGG | - | chr5.1:78283165-78283184 | MS.gene38091:intron | 35.0% |
| !!! | CGATCCAATGTTTTGATGTT+CGG | - | chr5.1:78286526-78286545 | MS.gene38091:intron | 35.0% |
| !!! | GGTGCAAAACTTTTTTCTGA+TGG | - | chr5.1:78282031-78282050 | MS.gene38091:intron | 35.0% |
| !!! | TCATCACTTTTTCCATTGGA+TGG | + | chr5.1:78281616-78281635 | None:intergenic | 35.0% |
| AACAGGAATCAACCTCAATC+CGG | - | chr5.1:78287266-78287285 | MS.gene38091:CDS | 40.0% | |
| AACCATTAGGCTCCATTTAG+GGG | + | chr5.1:78284681-78284700 | None:intergenic | 40.0% | |
| AATTTCCACTTTGCACAGCA+TGG | - | chr5.1:78283519-78283538 | MS.gene38091:intron | 40.0% | |
| AATTTCGTGGATTCCGAAAG+GGG | - | chr5.1:78280514-78280533 | MS.gene38091:CDS | 40.0% | |
| ACTCCTTCAACTTGAATGTG+GGG | - | chr5.1:78284431-78284450 | MS.gene38091:intron | 40.0% | |
| ACTGTATTGGAGGAGGATTT+AGG | - | chr5.1:78284504-78284523 | MS.gene38091:CDS | 40.0% | |
| AGAAGGAGGTTCAGCAAAAA+CGG | + | chr5.1:78280555-78280574 | None:intergenic | 40.0% | |
| AGAGATGCCTTCATCAGATA+AGG | + | chr5.1:78287228-78287247 | None:intergenic | 40.0% | |
| AGCGCCAAGTGATTAACTAA+CGG | + | chr5.1:78280966-78280985 | None:intergenic | 40.0% | |
| AGGTCCCAAATTTCAATGGA+TGG | + | chr5.1:78284009-78284028 | None:intergenic | 40.0% | |
| AGTGAAGACTTATCGAGTCA+GGG | + | chr5.1:78284917-78284936 | None:intergenic | 40.0% | |
| ATAGATGCCATATGCATGTG+AGG | - | chr5.1:78285022-78285041 | MS.gene38091:intron | 40.0% | |
| ATCCATGTTGAGATCCTTCA+AGG | + | chr5.1:78281650-78281669 | None:intergenic | 40.0% | |
| ATCTTCAAGACTCACCTAAC+AGG | + | chr5.1:78286502-78286521 | None:intergenic | 40.0% | |
| ATGTGGGGGAACTCAAAAAA+TGG | + | chr5.1:78284386-78284405 | None:intergenic | 40.0% | |
| ATTACGCCACTGGATAAAAC+CGG | + | chr5.1:78281758-78281777 | None:intergenic | 40.0% | |
| CAAACCATTAGGCTCCATTT+AGG | + | chr5.1:78284683-78284702 | None:intergenic | 40.0% | |
| CAATTTCGTGGATTCCGAAA+GGG | - | chr5.1:78280513-78280532 | MS.gene38091:CDS | 40.0% | |
| CACAAAAACTGTATTGGAGG+AGG | - | chr5.1:78284497-78284516 | MS.gene38091:CDS | 40.0% | |
| CACAAAATCACCGTAATGTG+AGG | - | chr5.1:78284471-78284490 | MS.gene38091:CDS | 40.0% | |
| CAGTCCGAACATCAAAACAT+TGG | + | chr5.1:78286533-78286552 | None:intergenic | 40.0% | |
| CTAAATGGAGCCTAATGGTT+TGG | - | chr5.1:78284681-78284700 | MS.gene38091:CDS | 40.0% | |
| GATAAGTTCCAACACTTGCA+TGG | - | chr5.1:78283154-78283173 | MS.gene38091:intron | 40.0% | |
| GATCAAACGAACCACTAAGA+AGG | + | chr5.1:78285950-78285969 | None:intergenic | 40.0% | |
| GCAATTGGTAAACCATCCAA+TGG | - | chr5.1:78281601-78281620 | MS.gene38091:intron | 40.0% | |
| GCACAACATATCCTTCTTAG+TGG | - | chr5.1:78285936-78285955 | MS.gene38091:intron | 40.0% | |
| GGATTGAAAGACATCATGGA+AGG | + | chr5.1:78285875-78285894 | None:intergenic | 40.0% | |
| GGGACCATCCATTGAAATTT+GGG | - | chr5.1:78284002-78284021 | MS.gene38091:intron | 40.0% | |
| GGGCCACAAGAAAATTATGA+AGG | - | chr5.1:78281295-78281314 | MS.gene38091:intron | 40.0% | |
| GTACTCCTTCAACTTGAATG+TGG | - | chr5.1:78284429-78284448 | MS.gene38091:intron | 40.0% | |
| GTTGGAACCAAATAATGTGG+GGG | + | chr5.1:78284400-78284419 | None:intergenic | 40.0% | |
| GTTGGTCGTCTATAACTGTT+GGG | - | chr5.1:78284336-78284355 | MS.gene38091:intron | 40.0% | |
| GTTTATGAGTTCAGCTACCT+TGG | - | chr5.1:78282004-78282023 | MS.gene38091:intron | 40.0% | |
| GTTTGATCATACTGTTGCCT+TGG | - | chr5.1:78285962-78285981 | MS.gene38091:intron | 40.0% | |
| TAAAGTCTTGGGTGAAGAGA+TGG | - | chr5.1:78281389-78281408 | MS.gene38091:intron | 40.0% | |
| TAATCACTTGTGAGGCTGTT+TGG | - | chr5.1:78281774-78281793 | MS.gene38091:intron | 40.0% | |
| TACCTAACTATGTACTCTGC+CGG | - | chr5.1:78281736-78281755 | MS.gene38091:intron | 40.0% | |
| TAGATGCAACAGAAGATGGT+TGG | + | chr5.1:78286884-78286903 | None:intergenic | 40.0% | |
| TAGATGCCATATGCATGTGA+GGG | - | chr5.1:78285023-78285042 | MS.gene38091:intron | 40.0% | |
| TATGGTAACAGGGAACTTCT+TGG | - | chr5.1:78283966-78283985 | MS.gene38091:intron | 40.0% | |
| TATGTGTAGTATCACATGCC+AGG | + | chr5.1:78282075-78282094 | None:intergenic | 40.0% | |
| TGACAAGCGAGTGAAGATTT+GGG | - | chr5.1:78285533-78285552 | MS.gene38091:intron | 40.0% | |
| TGATTAACTAACGGCCTGTT+CGG | + | chr5.1:78280957-78280976 | None:intergenic | 40.0% | |
| TGCATGACACCATGTCAATA+GGG | + | chr5.1:78286715-78286734 | None:intergenic | 40.0% | |
| TGCCGTATTATAGGATACAG+AGG | + | chr5.1:78286622-78286641 | None:intergenic | 40.0% | |
| TGGGACCATCCATTGAAATT+TGG | - | chr5.1:78284001-78284020 | MS.gene38091:intron | 40.0% | |
| TGTACTTGGACTTGAGTGAA+TGG | + | chr5.1:78284875-78284894 | None:intergenic | 40.0% | |
| TGTGGGGGAACTCAAAAAAT+GGG | + | chr5.1:78284385-78284404 | None:intergenic | 40.0% | |
| TGTTAGGTGAGTCTTGAAGA+TGG | - | chr5.1:78286501-78286520 | MS.gene38091:intron | 40.0% | |
| TGTTGGTCGTCTATAACTGT+TGG | - | chr5.1:78284335-78284354 | MS.gene38091:intron | 40.0% | |
| TTAACCCTACCCTATTGACA+TGG | - | chr5.1:78286703-78286722 | MS.gene38091:intron | 40.0% | |
| TTCAATCCACATATCCTCAC+AGG | - | chr5.1:78285887-78285906 | MS.gene38091:intron | 40.0% | |
| TTGAGTTCCCCCACATTATT+TGG | - | chr5.1:78284390-78284409 | MS.gene38091:intron | 40.0% | |
| TTGCTTGGAACAAGGAATAC+AGG | - | chr5.1:78285353-78285372 | MS.gene38091:intron | 40.0% | |
| TTTACCAATTGCACCAGCTA+CGG | + | chr5.1:78281593-78281612 | None:intergenic | 40.0% | |
| TTTCGGAATCCACGAAATTG+CGG | + | chr5.1:78280513-78280532 | None:intergenic | 40.0% | |
| ! | AACCCATTCTTGTTGGCTAT+CGG | - | chr5.1:78287085-78287104 | MS.gene38091:intron | 40.0% |
| ! | AAGATTTGGGATGTTGTTGC+TGG | - | chr5.1:78285546-78285565 | MS.gene38091:intron | 40.0% |
| ! | AAGGCATCTCTCGAAAATAC+GGG | - | chr5.1:78287237-78287256 | MS.gene38091:CDS | 40.0% |
| ! | AGCAGATGACCTTTAACTTC+AGG | - | chr5.1:78287142-78287161 | MS.gene38091:intron | 40.0% |
| ! | ATTAGGTGCTGCCGTATTAT+AGG | + | chr5.1:78286631-78286650 | None:intergenic | 40.0% |
| ! | CATAAGGTTTGTAGTGTTGG+AGG | + | chr5.1:78282888-78282907 | None:intergenic | 40.0% |
| ! | CCTTTTTCTCCTCCTTTAAG+GGG | + | chr5.1:78283554-78283573 | None:intergenic | 40.0% |
| ! | CTTTTCTATCTCCTTCTCAG+AGG | - | chr5.1:78287060-78287079 | MS.gene38091:intron | 40.0% |
| ! | GACCTTTTTCTCCTCCTTTA+AGG | + | chr5.1:78283556-78283575 | None:intergenic | 40.0% |
| ! | GTTGGTAAATCTAGCTTGGA+AGG | + | chr5.1:78285138-78285157 | None:intergenic | 40.0% |
| ! | TTTGGTTACCTCTTTTGCTC+TGG | - | chr5.1:78284227-78284246 | MS.gene38091:CDS | 40.0% |
| ! | TTTTGTACGACTAAGGGTCA+AGG | + | chr5.1:78282263-78282282 | None:intergenic | 40.0% |
| !! | AAACCCCACATTCAAGTTGA+AGG | + | chr5.1:78284437-78284456 | None:intergenic | 40.0% |
| !! | ACATGTGCTGTTCTTTTGTG+TGG | - | chr5.1:78284289-78284308 | MS.gene38091:CDS | 40.0% |
| !! | CTTTTTCTCCTCCTTTAAGG+GGG | + | chr5.1:78283553-78283572 | None:intergenic | 40.0% |
| !! | GAAGGCATCTCTCGAAAATA+CGG | - | chr5.1:78287236-78287255 | MS.gene38091:CDS | 40.0% |
| !! | GTGCGTTATGGTTATTTCTG+AGG | - | chr5.1:78286284-78286303 | MS.gene38091:intron | 40.0% |
| !! | TCTACCTTCTAGTTTGTGGA+TGG | - | chr5.1:78284842-78284861 | MS.gene38091:intron | 40.0% |
| !! | TTCTTGGCTGTTGGTTCAAT+GGG | - | chr5.1:78283982-78284001 | MS.gene38091:intron | 40.0% |
| !!! | CTTTTAAGGGACTGGCTTAT+TGG | - | chr5.1:78281074-78281093 | MS.gene38091:intron | 40.0% |
| AACCCCTAAATGGAGCCTAA+TGG | - | chr5.1:78284676-78284695 | MS.gene38091:CDS | 45.0% | |
| AACCGGCAGAGTACATAGTT+AGG | + | chr5.1:78281741-78281760 | None:intergenic | 45.0% | |
| AAGGGTCAAGGTTCTGTTCT+AGG | + | chr5.1:78282251-78282270 | None:intergenic | 45.0% | |
| ACACAACCCACCAAACCATT+AGG | + | chr5.1:78284694-78284713 | None:intergenic | 45.0% | |
| ACAGGAATCAACCTCAATCC+GGG | - | chr5.1:78287267-78287286 | MS.gene38091:CDS | 45.0% | |
| AGAGGACAACCCATTCTTGT+TGG | - | chr5.1:78287078-78287097 | MS.gene38091:intron | 45.0% | |
| AGTAGCATTCTGCACAGATG+TGG | + | chr5.1:78286568-78286587 | None:intergenic | 45.0% | |
| ATCTGCAGCATTCGGTATAC+AGG | + | chr5.1:78286797-78286816 | None:intergenic | 45.0% | |
| ATTCTGCACAGATGTGGCAT+TGG | + | chr5.1:78286562-78286581 | None:intergenic | 45.0% | |
| CAAGTTCATATCGCGGGTAT+TGG | + | chr5.1:78283471-78283490 | None:intergenic | 45.0% | |
| CAGGCCGTTAGTTAATCACT+TGG | - | chr5.1:78280959-78280978 | MS.gene38091:intron | 45.0% | |
| CATTGACCCTCACATGCATA+TGG | + | chr5.1:78285032-78285051 | None:intergenic | 45.0% | |
| CCCCTTAAAGGAGGAGAAAA+AGG | - | chr5.1:78283551-78283570 | MS.gene38091:intron | 45.0% | |
| CCCTCTGATGTAATCTGTCA+GGG | + | chr5.1:78281206-78281225 | None:intergenic | 45.0% | |
| CCCTGACAGATTACATCAGA+GGG | - | chr5.1:78281203-78281222 | MS.gene38091:CDS | 45.0% | |
| CTAAGAGTGAAGACCCAGTT+TGG | + | chr5.1:78281322-78281341 | None:intergenic | 45.0% | |
| CTCCGATAGCCAACAAGAAT+GGG | + | chr5.1:78287090-78287109 | None:intergenic | 45.0% | |
| CTGACAAGCGAGTGAAGATT+TGG | - | chr5.1:78285532-78285551 | MS.gene38091:intron | 45.0% | |
| CTGCATGACACCATGTCAAT+AGG | + | chr5.1:78286716-78286735 | None:intergenic | 45.0% | |
| CTTGAACCTGTGAGGATATG+TGG | + | chr5.1:78285896-78285915 | None:intergenic | 45.0% | |
| GAAGGAGGTTCAGCAAAAAC+GGG | + | chr5.1:78280554-78280573 | None:intergenic | 45.0% | |
| GACACCATGTCAATAGGGTA+GGG | + | chr5.1:78286710-78286729 | None:intergenic | 45.0% | |
| GAGTGAAGACTTATCGAGTC+AGG | + | chr5.1:78284918-78284937 | None:intergenic | 45.0% | |
| GAGTTATTCAGTTCGGGGAA+CGG | - | chr5.1:78283075-78283094 | MS.gene38091:intron | 45.0% | |
| GAGTTCAGCTACCTTGGTTT+AGG | - | chr5.1:78282010-78282029 | MS.gene38091:intron | 45.0% | |
| GAGTTCCAATCTGCAGCATT+CGG | + | chr5.1:78286805-78286824 | None:intergenic | 45.0% | |
| GCAATTTCGTGGATTCCGAA+AGG | - | chr5.1:78280512-78280531 | MS.gene38091:CDS | 45.0% | |
| GCTGTGCAAAGTGGAAATTC+CGG | + | chr5.1:78283518-78283537 | None:intergenic | 45.0% | |
| GGGTCGAGAGTAAATTGTGA+CGG | + | chr5.1:78281122-78281141 | None:intergenic | 45.0% | |
| GGTTGAGTGAAGACCCATTA+TGG | - | chr5.1:78281095-78281114 | MS.gene38091:intron | 45.0% | |
| GTAGTATCACATGCCAGGTT+TGG | + | chr5.1:78282070-78282089 | None:intergenic | 45.0% | |
| GTATACCGAATGCTGCAGAT+TGG | - | chr5.1:78286797-78286816 | MS.gene38091:intron | 45.0% | |
| GTATTGGAGGAGGATTTAGG+AGG | - | chr5.1:78284507-78284526 | MS.gene38091:CDS | 45.0% | |
| TAGCTTGGAAGGCTTCTGTT+GGG | + | chr5.1:78285127-78285146 | None:intergenic | 45.0% | |
| TCAAGTATCCATACCTGCCA+GGG | + | chr5.1:78283443-78283462 | None:intergenic | 45.0% | |
| TCATCTCCAACACTCTCACT+AGG | - | chr5.1:78280594-78280613 | MS.gene38091:intron | 45.0% | |
| TCCCTCTGATGTAATCTGTC+AGG | + | chr5.1:78281207-78281226 | None:intergenic | 45.0% | |
| TCCCTGACAGATTACATCAG+AGG | - | chr5.1:78281202-78281221 | MS.gene38091:CDS | 45.0% | |
| TCTGCTTTCGAAACCCCTTT+CGG | + | chr5.1:78280530-78280549 | None:intergenic | 45.0% | |
| TGACACCATGTCAATAGGGT+AGG | + | chr5.1:78286711-78286730 | None:intergenic | 45.0% | |
| TGATAAACCAAGGCCCTGTT+TGG | + | chr5.1:78282995-78283014 | None:intergenic | 45.0% | |
| TGATATTACCGACGCCTTGA+AGG | - | chr5.1:78281633-78281652 | MS.gene38091:intron | 45.0% | |
| TGATGTAGAGAGCTTGGCAT+GGG | - | chr5.1:78286235-78286254 | MS.gene38091:CDS | 45.0% | |
| TGGGACACCTTATCTGATGA+AGG | - | chr5.1:78287218-78287237 | MS.gene38091:CDS | 45.0% | |
| TGTTGGGTGGCAAAGAGAAA+AGG | - | chr5.1:78284138-78284157 | MS.gene38091:intron | 45.0% | |
| TTAACCGTAGCTGGTGCAAT+TGG | - | chr5.1:78281586-78281605 | MS.gene38091:CDS | 45.0% | |
| ! | AAGGAGTACGACTTGGAAGT+TGG | + | chr5.1:78284418-78284437 | None:intergenic | 45.0% |
| ! | AATGGAGCCTAATGGTTTGG+TGG | - | chr5.1:78284684-78284703 | MS.gene38091:CDS | 45.0% |
| ! | ACACACTGAGCACTCTTTTG+TGG | - | chr5.1:78286262-78286281 | MS.gene38091:intron | 45.0% |
| ! | CAAGTTGAAGGAGTACGACT+TGG | + | chr5.1:78284425-78284444 | None:intergenic | 45.0% |
| ! | CACTCTTTTGTGGTGCGTTA+TGG | - | chr5.1:78286272-78286291 | MS.gene38091:intron | 45.0% |
| ! | GATGTACCTAGTGAGAGTGT+TGG | + | chr5.1:78280603-78280622 | None:intergenic | 45.0% |
| !! | ACAAAAGAGTGCTCAGTGTG+TGG | + | chr5.1:78286263-78286282 | None:intergenic | 45.0% |
| !! | ACTCAGTACTTGGTCTTGCT+TGG | - | chr5.1:78285338-78285357 | MS.gene38091:intron | 45.0% |
| !! | ACTTGGTCTTGCTTGGAACA+AGG | - | chr5.1:78285345-78285364 | MS.gene38091:intron | 45.0% |
| !! | AGCAAGACCAAGTACTGAGT+CGG | + | chr5.1:78285338-78285357 | None:intergenic | 45.0% |
| !! | ATGATGCAAAGGCATCAAGC+AGG | + | chr5.1:78283922-78283941 | None:intergenic | 45.0% |
| !! | ATGGAGCCTAATGGTTTGGT+GGG | - | chr5.1:78284685-78284704 | MS.gene38091:CDS | 45.0% |
| !! | CTTCTTGGCTGTTGGTTCAA+TGG | - | chr5.1:78283981-78284000 | MS.gene38091:intron | 45.0% |
| !! | TAATGGTTTGGTGGGTTGTG+TGG | - | chr5.1:78284693-78284712 | MS.gene38091:CDS | 45.0% |
| !! | TATATAAAAAAAAATTCATA+AGG | + | chr5.1:78282904-78282923 | None:intergenic | 5.0% |
| !!! | TTTATTTTTTAAAATCTAAA+AGG | + | chr5.1:78285200-78285219 | None:intergenic | 5.0% |
| AACTAACGGCCTGTTCGGAT+TGG | + | chr5.1:78280952-78280971 | None:intergenic | 50.0% | |
| ACAGGGAACTTCTTGGCTGT+TGG | - | chr5.1:78283973-78283992 | MS.gene38091:intron | 50.0% | |
| ACATGTTTATCTGCCCTGGC+AGG | - | chr5.1:78283427-78283446 | MS.gene38091:intron | 50.0% | |
| AGCAACTGCTTGAACCTGTG+AGG | + | chr5.1:78285904-78285923 | None:intergenic | 50.0% | |
| CACAGGTTCAAGCAGTTGCT+TGG | - | chr5.1:78285904-78285923 | MS.gene38091:intron | 50.0% | |
| CACGTATAGCCAGAATGCGA+CGG | + | chr5.1:78286203-78286222 | None:intergenic | 50.0% | |
| CAGCGAATCCAGAGCAAAAG+AGG | + | chr5.1:78284238-78284257 | None:intergenic | 50.0% | |
| CAGGAATCAACCTCAATCCG+GGG | - | chr5.1:78287268-78287287 | MS.gene38091:CDS | 50.0% | |
| CAGTGGCGTAATCACTTGTG+AGG | - | chr5.1:78281766-78281785 | MS.gene38091:intron | 50.0% | |
| CCTCCGATAGCCAACAAGAA+TGG | + | chr5.1:78287091-78287110 | None:intergenic | 50.0% | |
| CGCCTTGAAGGATCTCAACA+TGG | - | chr5.1:78281645-78281664 | MS.gene38091:intron | 50.0% | |
| CTAACGAGGGGAAGTTAGTG+TGG | + | chr5.1:78286383-78286402 | None:intergenic | 50.0% | |
| CTAGCTTGGAAGGCTTCTGT+TGG | + | chr5.1:78285128-78285147 | None:intergenic | 50.0% | |
| CTCAAGTATCCATACCTGCC+AGG | + | chr5.1:78283444-78283463 | None:intergenic | 50.0% | |
| CTCACAAGTGATTACGCCAC+TGG | + | chr5.1:78281768-78281787 | None:intergenic | 50.0% | |
| CTGATGTAGAGAGCTTGGCA+TGG | - | chr5.1:78286234-78286253 | MS.gene38091:CDS | 50.0% | |
| CTGGCAGGTATGGATACTTG+AGG | - | chr5.1:78283442-78283461 | MS.gene38091:intron | 50.0% | |
| CTTAGACTTGCAAGCGAAGC+TGG | - | chr5.1:78282191-78282210 | MS.gene38091:intron | 50.0% | |
| CTTGATTGCCCCCTTAAAGG+AGG | - | chr5.1:78283542-78283561 | MS.gene38091:intron | 50.0% | |
| GCTCATGCTTTAACCGTAGC+TGG | - | chr5.1:78281577-78281596 | MS.gene38091:CDS | 50.0% | |
| GCTTCTTGCGACTGGATCTA+TGG | - | chr5.1:78286735-78286754 | MS.gene38091:intron | 50.0% | |
| GTAGAGCCATGTGTGGTGTT+GGG | - | chr5.1:78284122-78284141 | MS.gene38091:intron | 50.0% | |
| GTTGAGATCCTTCAAGGCGT+CGG | + | chr5.1:78281644-78281663 | None:intergenic | 50.0% | |
| TCAAGCCATGCTGTGCAAAG+TGG | + | chr5.1:78283527-78283546 | None:intergenic | 50.0% | |
| TGATGAGGTAGAGCCATGTG+TGG | - | chr5.1:78284115-78284134 | MS.gene38091:intron | 50.0% | |
| TGGCTTGATTGCCCCCTTAA+AGG | - | chr5.1:78283539-78283558 | MS.gene38091:intron | 50.0% | |
| TTGGCTATCGGAGGCTCAAA+GGG | - | chr5.1:78287097-78287116 | MS.gene38091:intron | 50.0% | |
| TTTATCTGCCCTGGCAGGTA+TGG | - | chr5.1:78283432-78283451 | MS.gene38091:intron | 50.0% | |
| ! | CCATTCTTGTTGGCTATCGG+AGG | - | chr5.1:78287088-78287107 | MS.gene38091:intron | 50.0% |
| ! | GCATTCTGGCTATACGTGGT+CGG | - | chr5.1:78286205-78286224 | MS.gene38091:CDS | 50.0% |
| ! | TGTTGTTTGTGCGCGTACTG+AGG | - | chr5.1:78283292-78283311 | MS.gene38091:intron | 50.0% |
| !! | AGTCACACCGACTCAGTACT+TGG | - | chr5.1:78285328-78285347 | MS.gene38091:intron | 50.0% |
| !! | GAATGGGTTGTCCTCTGAGA+AGG | + | chr5.1:78287074-78287093 | None:intergenic | 50.0% |
| !!! | ACTCTGCCGGTTTTATCCAG+TGG | - | chr5.1:78281749-78281768 | MS.gene38091:intron | 50.0% |
| ATTTAGGGGTTGCGAGGGGA+AGG | + | chr5.1:78284667-78284686 | None:intergenic | 55.0% | |
| CACTCTGGACCATCACCTTC+TGG | - | chr5.1:78282844-78282863 | MS.gene38091:intron | 55.0% | |
| CCTTCTCCTTACCAGCACTC+TGG | - | chr5.1:78282829-78282848 | MS.gene38091:intron | 55.0% | |
| CTCCATTTAGGGGTTGCGAG+GGG | + | chr5.1:78284671-78284690 | None:intergenic | 55.0% | |
| CTGGACCATCACCTTCTGGT+GGG | - | chr5.1:78282848-78282867 | MS.gene38091:intron | 55.0% | |
| GCTCCATTTAGGGGTTGCGA+GGG | + | chr5.1:78284672-78284691 | None:intergenic | 55.0% | |
| GGCTTATCCAAACAGGGCCT+TGG | - | chr5.1:78282985-78283004 | MS.gene38091:intron | 55.0% | |
| GGTAGAGCCATGTGTGGTGT+TGG | - | chr5.1:78284121-78284140 | MS.gene38091:intron | 55.0% | |
| GTCATGCAGCTTCTTGCGAC+TGG | - | chr5.1:78286727-78286746 | MS.gene38091:intron | 55.0% | |
| GTTGGCTATCGGAGGCTCAA+AGG | - | chr5.1:78287096-78287115 | MS.gene38091:intron | 55.0% | |
| TCTGGACCATCACCTTCTGG+TGG | - | chr5.1:78282847-78282866 | MS.gene38091:intron | 55.0% | |
| TGATGCCCACCAGAAGGTGA+TGG | + | chr5.1:78282856-78282875 | None:intergenic | 55.0% | |
| TTCCCCTCGCAACCCCTAAA+TGG | - | chr5.1:78284666-78284685 | MS.gene38091:CDS | 55.0% | |
| TTGCCACCCAACACCACACA+TGG | + | chr5.1:78284131-78284150 | None:intergenic | 55.0% | |
| TTTAGGGGTTGCGAGGGGAA+GGG | + | chr5.1:78284666-78284685 | None:intergenic | 55.0% | |
| ! | AAGGTGATGGTCCAGAGTGC+TGG | + | chr5.1:78282843-78282862 | None:intergenic | 55.0% |
| ! | CGTCGCATTCTGGCTATACG+TGG | - | chr5.1:78286201-78286220 | MS.gene38091:CDS | 55.0% |
| !! | CAGCGCTGATGTAGAGAGCT+TGG | - | chr5.1:78286229-78286248 | MS.gene38091:CDS | 55.0% |
| !! | CCAGAGTGCTGGTAAGGAGA+AGG | + | chr5.1:78282832-78282851 | None:intergenic | 55.0% |
| !! | GAGTACTGATGCCCACCAGA+AGG | + | chr5.1:78282862-78282881 | None:intergenic | 55.0% |
| !! | GATGGTCCAGAGTGCTGGTA+AGG | + | chr5.1:78282838-78282857 | None:intergenic | 55.0% |
| GGAAGGGAAGGGAGGGCTTT+GGG | + | chr5.1:78284650-78284669 | None:intergenic | 60.0% | |
| GGCTCCATTTAGGGGTTGCG+AGG | + | chr5.1:78284673-78284692 | None:intergenic | 60.0% | |
| GTAAGGACGCCGTCGCATTC+TGG | - | chr5.1:78286191-78286210 | MS.gene38091:CDS | 60.0% | |
| ! | GAGCCATGTGTGGTGTTGGG+TGG | - | chr5.1:78284125-78284144 | MS.gene38091:intron | 60.0% |
| !! | AAGGGAGGGCTTTGGGAGGA+AGG | + | chr5.1:78284643-78284662 | None:intergenic | 60.0% |
| !! | AGGGAGGGCTTTGGGAGGAA+GGG | + | chr5.1:78284642-78284661 | None:intergenic | 60.0% |
| GGGAAGGGAAGGGAGGGCTT+TGG | + | chr5.1:78284651-78284670 | None:intergenic | 65.0% | |
| GGGTTGCGAGGGGAAGGGAA+GGG | + | chr5.1:78284661-78284680 | None:intergenic | 65.0% | |
| TGCGAGGGGAAGGGAAGGGA+GGG | + | chr5.1:78284657-78284676 | None:intergenic | 65.0% | |
| TTGCGAGGGGAAGGGAAGGG+AGG | + | chr5.1:78284658-78284677 | None:intergenic | 65.0% | |
| !! | AGGGAAGGGAGGGCTTTGGG+AGG | + | chr5.1:78284647-78284666 | None:intergenic | 65.0% |
| GGGGTTGCGAGGGGAAGGGA+AGG | + | chr5.1:78284662-78284681 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 78280503 | 78287295 | 78280503 | ID=MS.gene38091 |
| chr5.1 | mRNA | 78280503 | 78287295 | 78280503 | ID=MS.gene38091.t1;Parent=MS.gene38091 |
| chr5.1 | exon | 78287183 | 78287295 | 78287183 | ID=MS.gene38091.t1.exon1;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78287183 | 78287295 | 78287183 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78286104 | 78286276 | 78286104 | ID=MS.gene38091.t1.exon2;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78286104 | 78286276 | 78286104 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78284649 | 78284728 | 78284649 | ID=MS.gene38091.t1.exon3;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78284649 | 78284728 | 78284649 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78284464 | 78284562 | 78284464 | ID=MS.gene38091.t1.exon4;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78284464 | 78284562 | 78284464 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78284226 | 78284349 | 78284226 | ID=MS.gene38091.t1.exon5;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78284226 | 78284349 | 78284226 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78283763 | 78283821 | 78283763 | ID=MS.gene38091.t1.exon6;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78283763 | 78283821 | 78283763 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78283614 | 78283685 | 78283614 | ID=MS.gene38091.t1.exon7;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78283614 | 78283685 | 78283614 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78282424 | 78282494 | 78282424 | ID=MS.gene38091.t1.exon8;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78282424 | 78282494 | 78282424 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78282193 | 78282289 | 78282193 | ID=MS.gene38091.t1.exon9;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78282193 | 78282289 | 78282193 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78281815 | 78281889 | 78281815 | ID=MS.gene38091.t1.exon10;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78281815 | 78281889 | 78281815 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78281515 | 78281613 | 78281515 | ID=MS.gene38091.t1.exon11;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78281515 | 78281613 | 78281515 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78281148 | 78281291 | 78281148 | ID=MS.gene38091.t1.exon12;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78281148 | 78281291 | 78281148 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78281033 | 78281062 | 78281033 | ID=MS.gene38091.t1.exon13;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78281033 | 78281062 | 78281033 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78280881 | 78280943 | 78280881 | ID=MS.gene38091.t1.exon14;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78280881 | 78280943 | 78280881 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78280669 | 78280746 | 78280669 | ID=MS.gene38091.t1.exon15;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78280669 | 78280746 | 78280669 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| chr5.1 | exon | 78280503 | 78280583 | 78280503 | ID=MS.gene38091.t1.exon16;Parent=MS.gene38091.t1 |
| chr5.1 | CDS | 78280503 | 78280583 | 78280503 | ID=cds.MS.gene38091.t1;Parent=MS.gene38091.t1 |
| Gene Sequence |
| Protein sequence |
