Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38110.t1 | XP_003618085.1 | 98 | 400 | 6 | 2 | 1 | 399 | 1 | 399 | 6.10E-231 | 809.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38110.t1 | P35055 | 81.2 | 399 | 60 | 4 | 1 | 399 | 2 | 385 | 2.2e-189 | 662.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38110.t1 | G7KFC7 | 98.0 | 400 | 6 | 2 | 1 | 399 | 1 | 399 | 4.4e-231 | 809.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057148 | MS.gene38110 | 0.844305 | 8.21E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38110.t1 | MTR_5g098800 | 98.000 | 400 | 6 | 2 | 1 | 399 | 1 | 399 | 0.0 | 814 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38110.t1 | AT1G03475 | 78.772 | 391 | 68 | 4 | 19 | 399 | 1 | 386 | 0.0 | 624 |
| MS.gene38110.t1 | AT4G03205 | 69.874 | 239 | 65 | 3 | 11 | 248 | 3 | 235 | 1.83e-110 | 324 |
| MS.gene38110.t1 | AT4G03205 | 70.042 | 237 | 64 | 3 | 11 | 246 | 3 | 233 | 3.25e-110 | 323 |
Find 100 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGTGTAGTGAGTGATTT+TGG | 0.161536 | 5.1:-79983861 | None:intergenic |
| ACGATATGTTGAATTTAATT+TGG | 0.210051 | 5.1:+79989302 | MS.gene38110:CDS |
| GTTAATGTTTCTGTTGTTTA+TGG | 0.239575 | 5.1:+79984197 | MS.gene38110:CDS |
| CATTCTTCGCTTCCTACTTC+TGG | 0.260841 | 5.1:-79989639 | None:intergenic |
| GTATCGGGGCGTTCTGATTC+TGG | 0.283725 | 5.1:-79983957 | None:intergenic |
| TCTTCAAGATGGTGCTGTTT+GGG | 0.316342 | 5.1:+79984163 | MS.gene38110:CDS |
| GCTGCTAAGGGCGCTGCAGC+GGG | 0.323359 | 5.1:+79984245 | MS.gene38110:CDS |
| AAATGCAAGGTTGGGGCAAA+TGG | 0.346094 | 5.1:-79986589 | None:intergenic |
| TCAAGACCTGGTGGTGGTGG+TGG | 0.349702 | 5.1:+79984128 | MS.gene38110:CDS |
| TTCTTCAAGATGGTGCTGTT+TGG | 0.354033 | 5.1:+79984162 | MS.gene38110:CDS |
| ATCACACCATTTCTTGAATC+GGG | 0.366775 | 5.1:-79988174 | None:intergenic |
| ATAAATTAGAGCCATTCCTT+TGG | 0.373068 | 5.1:-79989687 | None:intergenic |
| GAAAGTTTAAAGAAGATGTT+TGG | 0.390331 | 5.1:+79984105 | MS.gene38110:CDS |
| TTTGGCTGCAGGTATATGAT+AGG | 0.392398 | 5.1:+79989408 | MS.gene38110:intron |
| CGAGATGAAAGGAGAGGACT+TGG | 0.396118 | 5.1:+79989009 | MS.gene38110:CDS |
| CATCACACCATTTCTTGAAT+CGG | 0.396583 | 5.1:-79988175 | None:intergenic |
| TATGATAGGGGTACAACATT+TGG | 0.397928 | 5.1:+79989422 | MS.gene38110:CDS |
| AAAACTTACTGAGCTAATTC+CGG | 0.400140 | 5.1:-79984309 | None:intergenic |
| TAAATTAGAGCCATTCCTTT+GGG | 0.416224 | 5.1:-79989686 | None:intergenic |
| GATAATTGAAATGCAAGGTT+GGG | 0.419160 | 5.1:-79986597 | None:intergenic |
| TGATGCTTATCGTGCTGCTA+AGG | 0.424169 | 5.1:+79984232 | MS.gene38110:CDS |
| CAAGACCTGGTGGTGGTGGT+GGG | 0.438924 | 5.1:+79984129 | MS.gene38110:CDS |
| ATGCTTCTTTCCTTTGCTAC+TGG | 0.439387 | 5.1:+79989072 | MS.gene38110:CDS |
| TGCTGCTAAGGGCGCTGCAG+CGG | 0.453118 | 5.1:+79984244 | MS.gene38110:CDS |
| TTGGCTGCAGGTATATGATA+GGG | 0.462004 | 5.1:+79989409 | MS.gene38110:intron |
| TGGTCAAGACCTGGTGGTGG+TGG | 0.468637 | 5.1:+79984125 | MS.gene38110:CDS |
| TTTCTCTCCCACTGACTGCT+CGG | 0.469406 | 5.1:+79989480 | MS.gene38110:CDS |
| CAGAAGTAGGAAGCGAAGAA+TGG | 0.479994 | 5.1:+79989640 | MS.gene38110:CDS |
| CGATAATTGAAATGCAAGGT+TGG | 0.487126 | 5.1:-79986598 | None:intergenic |
| AGGTCCCGGCTTCTGATCAC+TGG | 0.488605 | 5.1:-79984270 | None:intergenic |
| GGTTCCAGTGATCAGAAGCC+GGG | 0.492346 | 5.1:+79984266 | MS.gene38110:CDS |
| CTAGACAATGGTGGTTCGGT+GGG | 0.497187 | 5.1:+79987452 | MS.gene38110:CDS |
| CTTCTCGAATCGAGCTCTAA+CGG | 0.498945 | 5.1:-79984024 | None:intergenic |
| CACCATTGTCTAGGTGCTCC+AGG | 0.508528 | 5.1:-79987442 | None:intergenic |
| TCTCCCACTGACTGCTCGGT+GGG | 0.508835 | 5.1:+79989484 | MS.gene38110:CDS |
| ATGCCGCGGAGAAATGTATC+GGG | 0.509233 | 5.1:-79983972 | None:intergenic |
| GATGCTTATCGTGCTGCTAA+GGG | 0.511744 | 5.1:+79984233 | MS.gene38110:CDS |
| GCACCTAGACAATGGTGGTT+CGG | 0.513604 | 5.1:+79987448 | MS.gene38110:CDS |
| GATGAAAGGAGAGGACTTGG+AGG | 0.516310 | 5.1:+79989012 | MS.gene38110:CDS |
| CAAGTCCTCTCCTTTCATCT+CGG | 0.521529 | 5.1:-79989008 | None:intergenic |
| CCTAGACAATGGTGGTTCGG+TGG | 0.527031 | 5.1:+79987451 | MS.gene38110:CDS |
| ATTAGTAGAGTTCTTCAAGA+TGG | 0.527187 | 5.1:+79984152 | MS.gene38110:CDS |
| GGGTTCCAGTGATCAGAAGC+CGG | 0.529802 | 5.1:+79984265 | MS.gene38110:CDS |
| TTAGCAGCACGATAAGCATC+AGG | 0.529867 | 5.1:-79984230 | None:intergenic |
| CCACCGAACCACCATTGTCT+AGG | 0.530916 | 5.1:-79987451 | None:intergenic |
| TGCTTTCTGATGATCTGTGA+AGG | 0.536139 | 5.1:-79989259 | None:intergenic |
| ATATACCTATCATAGAGAAA+AGG | 0.538904 | 5.1:+79989226 | MS.gene38110:CDS |
| AATGCAAGGTTGGGGCAAAT+GGG | 0.541145 | 5.1:-79986588 | None:intergenic |
| AAAGGAGTGATGGAGTAAGA+AGG | 0.543812 | 5.1:-79983786 | None:intergenic |
| ACACATACCTTTGGGAGCAT+CGG | 0.548551 | 5.1:-79986632 | None:intergenic |
| GATGCCGCGGAGAAATGTAT+CGG | 0.549690 | 5.1:-79983973 | None:intergenic |
| TGGCTGCAGGTATATGATAG+GGG | 0.553038 | 5.1:+79989410 | MS.gene38110:intron |
| TGTGTGCAGAAACCAGAAGT+AGG | 0.553657 | 5.1:+79989627 | MS.gene38110:intron |
| TTTGAAGATGTGAATGTGAA+AGG | 0.554486 | 5.1:-79983804 | None:intergenic |
| TTGTTATGACTCGTTGAAAG+TGG | 0.563289 | 5.1:-79983905 | None:intergenic |
| CTAATCCCACCACCACCACC+AGG | 0.564042 | 5.1:-79984134 | None:intergenic |
| AAATTCAGCACCGAGATGAA+AGG | 0.567112 | 5.1:+79988998 | MS.gene38110:intron |
| CTCTCCCACTGACTGCTCGG+TGG | 0.567673 | 5.1:+79989483 | MS.gene38110:CDS |
| AATGTAAGCAGGGGTTAAGT+CGG | 0.569045 | 5.1:-79987479 | None:intergenic |
| CAAGCAATTACCAGTAGCAA+AGG | 0.569474 | 5.1:-79989082 | None:intergenic |
| AAGCATGGCAACAATTGCGA+AGG | 0.577934 | 5.1:+79989277 | MS.gene38110:CDS |
| AGACAATGGTGGTTCGGTGG+GGG | 0.578555 | 5.1:+79987454 | MS.gene38110:CDS |
| TGTGAATGTGAAAGGAGTGA+TGG | 0.581520 | 5.1:-79983796 | None:intergenic |
| ATTGAAGAAGCTGATGGTGG+TGG | 0.583194 | 5.1:+79984083 | MS.gene38110:CDS |
| TCACACCATTTCTTGAATCG+GGG | 0.588342 | 5.1:-79988173 | None:intergenic |
| TCACAGATCATCAGAAAGCA+TGG | 0.590156 | 5.1:+79989262 | MS.gene38110:CDS |
| TATTCCCACCGAGCAGTCAG+TGG | 0.590842 | 5.1:-79989488 | None:intergenic |
| ATAATTGAAATGCAAGGTTG+GGG | 0.591405 | 5.1:-79986596 | None:intergenic |
| CTCTATGATAGGTATATAAG+CGG | 0.593614 | 5.1:-79989220 | None:intergenic |
| AGCATGGCAACAATTGCGAA+GGG | 0.599983 | 5.1:+79989278 | MS.gene38110:CDS |
| CACACCATTTCTTGAATCGG+GGG | 0.601935 | 5.1:-79988172 | None:intergenic |
| TTGAAAGTGGTGTGAAGATG+TGG | 0.605973 | 5.1:-79983892 | None:intergenic |
| CTCCGTCGTTGTCGATGCCG+CGG | 0.607776 | 5.1:-79983986 | None:intergenic |
| TCTATGATAGGTATATAAGC+GGG | 0.613583 | 5.1:-79989219 | None:intergenic |
| GGTGCTGTTTGGGAGAAAGC+TGG | 0.617824 | 5.1:+79984173 | MS.gene38110:CDS |
| AGATGCATGCATTAACCCAA+AGG | 0.618643 | 5.1:+79989671 | MS.gene38110:CDS |
| TTTGAAACCGATGCTCCCAA+AGG | 0.621458 | 5.1:+79986625 | MS.gene38110:CDS |
| ATTCCCACCGAGCAGTCAGT+GGG | 0.621466 | 5.1:-79989487 | None:intergenic |
| TAGACAATGGTGGTTCGGTG+GGG | 0.621581 | 5.1:+79987453 | MS.gene38110:CDS |
| GCTTTCTGATGATCTGTGAA+GGG | 0.631666 | 5.1:-79989258 | None:intergenic |
| CATGCATTAACCCAAAGGAA+TGG | 0.631803 | 5.1:+79989676 | MS.gene38110:CDS |
| ATAGCGATAATTGAAATGCA+AGG | 0.631845 | 5.1:-79986602 | None:intergenic |
| GTTTGGTCAAGACCTGGTGG+TGG | 0.634333 | 5.1:+79984122 | MS.gene38110:CDS |
| CTCCTGGAGCACCTAGACAA+TGG | 0.634463 | 5.1:+79987440 | MS.gene38110:CDS |
| ACCTATCATAGAGAAAAGGA+AGG | 0.642984 | 5.1:+79989230 | MS.gene38110:CDS |
| AGCTCTAACGGAAGATGCCG+CGG | 0.645789 | 5.1:-79984012 | None:intergenic |
| GAAGATGTTTGGTCAAGACC+TGG | 0.652074 | 5.1:+79984116 | MS.gene38110:CDS |
| CTGGAGCACCTAGACAATGG+TGG | 0.660100 | 5.1:+79987443 | MS.gene38110:CDS |
| TCTAACGGAAGATGCCGCGG+TGG | 0.668976 | 5.1:-79984009 | None:intergenic |
| CTCCGCGGCATCGACAACGA+CGG | 0.669627 | 5.1:+79983984 | MS.gene38110:CDS |
| CAGCACCGAGATGAAAGGAG+AGG | 0.676832 | 5.1:+79989003 | MS.gene38110:intron |
| GCAGCACGATAAGCATCAGG+TGG | 0.684090 | 5.1:-79984227 | None:intergenic |
| CGACAACGACGGAGCCACCG+CGG | 0.685176 | 5.1:+79983995 | MS.gene38110:CDS |
| TGCCGCGGAGAAATGTATCG+GGG | 0.703940 | 5.1:-79983971 | None:intergenic |
| GCATGGCAACAATTGCGAAG+GGG | 0.716040 | 5.1:+79989279 | MS.gene38110:CDS |
| GCAATTGAAGAAGCTGATGG+TGG | 0.716899 | 5.1:+79984080 | MS.gene38110:CDS |
| AATGCAATTGAAGAAGCTGA+TGG | 0.722953 | 5.1:+79984077 | MS.gene38110:CDS |
| CGCCCCGATACATTTCTCCG+CGG | 0.735875 | 5.1:+79983969 | MS.gene38110:CDS |
| GCTGATATAGAAATTGTACA+CGG | 0.741835 | 5.1:-79983762 | None:intergenic |
| GATGTTTGGTCAAGACCTGG+TGG | 0.753790 | 5.1:+79984119 | MS.gene38110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATATATAGATAATTTGT+TGG | + | chr5.1:79989105-79989124 | MS.gene38110:intron | 10.0% |
| !!! | ATTTTGATAATTTAGAATTT+TGG | - | chr5.1:79985501-79985520 | None:intergenic | 10.0% |
| !!! | TTTCTTATTGTAATTATTTT+GGG | + | chr5.1:79986710-79986729 | MS.gene38110:intron | 10.0% |
| !!! | TTTTCTTATTGTAATTATTT+TGG | + | chr5.1:79986709-79986728 | MS.gene38110:intron | 10.0% |
| !!! | TTTTTTTAGATTATATTGAT+AGG | + | chr5.1:79986075-79986094 | MS.gene38110:intron | 10.0% |
| !! | AAAATTTACTCTTATATTGA+AGG | - | chr5.1:79988349-79988368 | None:intergenic | 15.0% |
| !! | AATCATTATAATTACTAGTA+AGG | + | chr5.1:79985073-79985092 | MS.gene38110:intron | 15.0% |
| !! | ACTTTATATCTAAAAATTGA+TGG | + | chr5.1:79985604-79985623 | MS.gene38110:intron | 15.0% |
| !! | ATAAAATGTTGGAATATAAT+TGG | - | chr5.1:79984357-79984376 | None:intergenic | 15.0% |
| !! | ATGAATGAATTATAAAATGT+TGG | - | chr5.1:79984368-79984387 | None:intergenic | 15.0% |
| !! | TTTCATAAACTCAAAAATAA+GGG | - | chr5.1:79984698-79984717 | None:intergenic | 15.0% |
| !!! | TTTTCATAAACTCAAAAATA+AGG | - | chr5.1:79984699-79984718 | None:intergenic | 15.0% |
| !! | AAAAAGAATGTCAGAAATAT+AGG | + | chr5.1:79986028-79986047 | MS.gene38110:intron | 20.0% |
| !! | AATCACAAAGTTTGTAAATT+AGG | + | chr5.1:79985303-79985322 | MS.gene38110:intron | 20.0% |
| !! | ACGATATGTTGAATTTAATT+TGG | + | chr5.1:79989302-79989321 | MS.gene38110:CDS | 20.0% |
| !! | ATCACAAAGTTTGTAAATTA+GGG | + | chr5.1:79985304-79985323 | MS.gene38110:intron | 20.0% |
| !! | CAAATTATTCATTGAATGTT+TGG | - | chr5.1:79986514-79986533 | None:intergenic | 20.0% |
| !! | GATAGATATAAATGTTAGTT+TGG | + | chr5.1:79984397-79984416 | MS.gene38110:intron | 20.0% |
| !! | TACTAATTAAATTGAGTATG+TGG | + | chr5.1:79988932-79988951 | MS.gene38110:intron | 20.0% |
| !! | TATTATTAATAAGCTTGTCA+AGG | - | chr5.1:79984812-79984831 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTACCAAAGAAT+TGG | - | chr5.1:79987580-79987599 | None:intergenic | 20.0% |
| !!! | AAAAAAAACTTTTAGTGACT+AGG | - | chr5.1:79984877-79984896 | None:intergenic | 20.0% |
| !!! | AAAAAAACTTTTAGTGACTA+GGG | - | chr5.1:79984876-79984895 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTTGTCATGTT+CGG | + | chr5.1:79984545-79984564 | MS.gene38110:intron | 20.0% |
| !!! | AATTAGTCTGATTTGTATAA+AGG | + | chr5.1:79985522-79985541 | MS.gene38110:intron | 20.0% |
| !!! | GATTTTTGAATTCATTGATT+TGG | + | chr5.1:79984439-79984458 | MS.gene38110:intron | 20.0% |
| !!! | TGATGATTACTTTTATATCA+AGG | + | chr5.1:79988193-79988212 | MS.gene38110:CDS | 20.0% |
| !!! | TTATTTGAGTAGTTTTAATC+TGG | + | chr5.1:79987647-79987666 | MS.gene38110:intron | 20.0% |
| !!! | TTTGAATGAATTGATTTTGT+GGG | + | chr5.1:79985273-79985292 | MS.gene38110:intron | 20.0% |
| !!! | TTTTAGATTATATTGATAGG+CGG | + | chr5.1:79986078-79986097 | MS.gene38110:intron | 20.0% |
| !!! | TTTTGAATGAATTGATTTTG+TGG | + | chr5.1:79985272-79985291 | MS.gene38110:intron | 20.0% |
| ! | AAAAACACATTTCTAAATCC+TGG | - | chr5.1:79986814-79986833 | None:intergenic | 25.0% |
| ! | AAAACTGCTATAAAATTGCA+GGG | + | chr5.1:79985035-79985054 | MS.gene38110:intron | 25.0% |
| ! | AAAGAATTGAATCTCCAAAT+TGG | + | chr5.1:79987947-79987966 | MS.gene38110:intron | 25.0% |
| ! | AAATCTCCATAATGTGAAAA+AGG | - | chr5.1:79988230-79988249 | None:intergenic | 25.0% |
| ! | ATATACCTATCATAGAGAAA+AGG | + | chr5.1:79989226-79989245 | MS.gene38110:CDS | 25.0% |
| ! | GAAAAATAAGCCAATTGAAA+CGG | + | chr5.1:79984671-79984690 | MS.gene38110:intron | 25.0% |
| ! | GAAAGTTTAAAGAAGATGTT+TGG | + | chr5.1:79984105-79984124 | MS.gene38110:CDS | 25.0% |
| ! | GCTGATAATATGATATATTC+AGG | + | chr5.1:79988540-79988559 | MS.gene38110:intron | 25.0% |
| ! | TAAAACTGCTATAAAATTGC+AGG | + | chr5.1:79985034-79985053 | MS.gene38110:intron | 25.0% |
| ! | TAATCCCAATATTATCAATG+AGG | - | chr5.1:79988728-79988747 | None:intergenic | 25.0% |
| ! | TATGATAAAAGAGTCAATGT+AGG | + | chr5.1:79987970-79987989 | MS.gene38110:intron | 25.0% |
| ! | TCAAATAAGATGTCAAAGTA+AGG | - | chr5.1:79987635-79987654 | None:intergenic | 25.0% |
| ! | TCACAAAGTTTGTAAATTAG+GGG | + | chr5.1:79985305-79985324 | MS.gene38110:intron | 25.0% |
| ! | TGAATAGATAAAGAGACAAA+GGG | - | chr5.1:79986885-79986904 | None:intergenic | 25.0% |
| ! | TGAATTAAATATGTCTAGCT+TGG | + | chr5.1:79987695-79987714 | MS.gene38110:intron | 25.0% |
| ! | TTATATAATGCTTCTGTTGT+AGG | + | chr5.1:79988109-79988128 | MS.gene38110:intron | 25.0% |
| ! | TTGAATAGATAAAGAGACAA+AGG | - | chr5.1:79986886-79986905 | None:intergenic | 25.0% |
| !! | AAAAAACTTTTAGTGACTAG+GGG | - | chr5.1:79984875-79984894 | None:intergenic | 25.0% |
| !! | AAACCAATTTTCATCTTTCT+CGG | - | chr5.1:79986162-79986181 | None:intergenic | 25.0% |
| !! | AATTTTATAACTGGAACATC+AGG | - | chr5.1:79989583-79989602 | None:intergenic | 25.0% |
| !! | ACTCTTTTATCATACCAATT+TGG | - | chr5.1:79987964-79987983 | None:intergenic | 25.0% |
| !! | AGGATTTAGAAATGTGTTTT+TGG | + | chr5.1:79986813-79986832 | MS.gene38110:intron | 25.0% |
| !! | GAATGTTTGGATTCAATTTT+GGG | - | chr5.1:79986501-79986520 | None:intergenic | 25.0% |
| !! | GTTAATGTTTCTGTTGTTTA+TGG | + | chr5.1:79984197-79984216 | MS.gene38110:CDS | 25.0% |
| !! | TAACTATGTATCGATCAATT+GGG | - | chr5.1:79985210-79985229 | None:intergenic | 25.0% |
| !! | TCAATTGGTATACTCTAAAA+TGG | - | chr5.1:79988829-79988848 | None:intergenic | 25.0% |
| !! | TCATTTTCTTAAATTACTGC+CGG | - | chr5.1:79985888-79985907 | None:intergenic | 25.0% |
| !! | TGAACCTCATTGATAATATT+GGG | + | chr5.1:79988721-79988740 | MS.gene38110:intron | 25.0% |
| !! | TGAATGTTTGGATTCAATTT+TGG | - | chr5.1:79986502-79986521 | None:intergenic | 25.0% |
| !! | TGTTTCTTTTTCTATGGAAA+CGG | - | chr5.1:79983937-79983956 | None:intergenic | 25.0% |
| !! | TTGGAGATTCAATTCTTTTT+GGG | - | chr5.1:79987945-79987964 | None:intergenic | 25.0% |
| !! | TTTGGAGATTCAATTCTTTT+TGG | - | chr5.1:79987946-79987965 | None:intergenic | 25.0% |
| !! | TTTTGCAATCTTGTTCTTTT+GGG | + | chr5.1:79987042-79987061 | MS.gene38110:intron | 25.0% |
| !! | TTTTTATGCATTTAACTGCA+AGG | + | chr5.1:79988649-79988668 | MS.gene38110:intron | 25.0% |
| !! | TTTTTGCAATCTTGTTCTTT+TGG | + | chr5.1:79987041-79987060 | MS.gene38110:intron | 25.0% |
| !!! | AAATTGAGTTGGCATATATT+TGG | + | chr5.1:79984482-79984501 | MS.gene38110:intron | 25.0% |
| !!! | AGAAAGATGAAAATTGGTTT+TGG | + | chr5.1:79986162-79986181 | MS.gene38110:intron | 25.0% |
| !!! | ATAGACACTTAGTTTTTTGT+TGG | + | chr5.1:79985183-79985202 | MS.gene38110:intron | 25.0% |
| !!! | ATATTTTAAGCATAGGGATT+TGG | + | chr5.1:79987741-79987760 | MS.gene38110:intron | 25.0% |
| !!! | ATCCGATATTTTTTTGCTTA+AGG | + | chr5.1:79988059-79988078 | MS.gene38110:intron | 25.0% |
| !!! | ATTTAGAAATGTGTTTTTGG+CGG | + | chr5.1:79986816-79986835 | MS.gene38110:intron | 25.0% |
| !!! | CAATTGGTATACTCTAAAAT+GGG | - | chr5.1:79988828-79988847 | None:intergenic | 25.0% |
| !!! | GTATTTTTTTGCCAAAATCA+TGG | + | chr5.1:79986426-79986445 | MS.gene38110:intron | 25.0% |
| !!! | TAAATGTTAGTTTGGTTTTG+CGG | + | chr5.1:79984405-79984424 | MS.gene38110:intron | 25.0% |
| !!! | TAATGGTTTTTCAAATCTTG+TGG | + | chr5.1:79987546-79987565 | MS.gene38110:intron | 25.0% |
| !!! | TAGACACTTAGTTTTTTGTT+GGG | + | chr5.1:79985184-79985203 | MS.gene38110:intron | 25.0% |
| !!! | TATGTTTTGTTTCCATTTCA+AGG | - | chr5.1:79987853-79987872 | None:intergenic | 25.0% |
| !!! | TCCGATATTTTTTTGCTTAA+GGG | + | chr5.1:79988060-79988079 | MS.gene38110:intron | 25.0% |
| AAAACTTACTGAGCTAATTC+CGG | - | chr5.1:79984312-79984331 | None:intergenic | 30.0% | |
| AAACCGAATTCAAGAATGAT+AGG | - | chr5.1:79985700-79985719 | None:intergenic | 30.0% | |
| AAAGTATGCCTTATACTATG+TGG | + | chr5.1:79987131-79987150 | MS.gene38110:intron | 30.0% | |
| AAGGAATAGAGCACAAAATT+TGG | - | chr5.1:79989353-79989372 | None:intergenic | 30.0% | |
| ACAACATTTGGACTAAAAAC+TGG | + | chr5.1:79989434-79989453 | MS.gene38110:CDS | 30.0% | |
| AGCTGTACTTATGATAGTTA+AGG | - | chr5.1:79987274-79987293 | None:intergenic | 30.0% | |
| AGTGAGTTCAATGATAACTT+TGG | + | chr5.1:79986237-79986256 | MS.gene38110:intron | 30.0% | |
| AGTTCAAGTAGAATCAATTC+TGG | - | chr5.1:79984592-79984611 | None:intergenic | 30.0% | |
| AGTTTAAACCTGATCTGAAA+AGG | - | chr5.1:79989372-79989391 | None:intergenic | 30.0% | |
| ATAATTGAAATGCAAGGTTG+GGG | - | chr5.1:79986599-79986618 | None:intergenic | 30.0% | |
| ATAGCGATAATTGAAATGCA+AGG | - | chr5.1:79986605-79986624 | None:intergenic | 30.0% | |
| ATCTAGAAGAATCCATATGT+TGG | - | chr5.1:79985741-79985760 | None:intergenic | 30.0% | |
| ATCTGGATTAAACCTTGAAA+TGG | + | chr5.1:79987838-79987857 | MS.gene38110:intron | 30.0% | |
| ATGATATATTCAGGAGACTT+AGG | + | chr5.1:79988549-79988568 | MS.gene38110:intron | 30.0% | |
| ATTAGTAGAGTTCTTCAAGA+TGG | + | chr5.1:79984152-79984171 | MS.gene38110:CDS | 30.0% | |
| CACAAAGTTTGTAAATTAGG+GGG | + | chr5.1:79985306-79985325 | MS.gene38110:intron | 30.0% | |
| CACAATAACAAATCCAAAAC+AGG | - | chr5.1:79986948-79986967 | None:intergenic | 30.0% | |
| CATCCTATCATTCTTGAATT+CGG | + | chr5.1:79985694-79985713 | MS.gene38110:intron | 30.0% | |
| CTCTATGATAGGTATATAAG+CGG | - | chr5.1:79989223-79989242 | None:intergenic | 30.0% | |
| GATAATTGAAATGCAAGGTT+GGG | - | chr5.1:79986600-79986619 | None:intergenic | 30.0% | |
| GATTTGGATTCAAATTGAGT+TGG | + | chr5.1:79984455-79984474 | MS.gene38110:intron | 30.0% | |
| GCCCTTAAGCAAAAAAATAT+CGG | - | chr5.1:79988064-79988083 | None:intergenic | 30.0% | |
| GCTGATATAGAAATTGTACA+CGG | - | chr5.1:79983765-79983784 | None:intergenic | 30.0% | |
| GCTGTACTTATGATAGTTAA+GGG | - | chr5.1:79987273-79987292 | None:intergenic | 30.0% | |
| GGATACTGTTTAATCTTGTA+TGG | + | chr5.1:79985094-79985113 | MS.gene38110:intron | 30.0% | |
| GTGAGTTCAATGATAACTTT+GGG | + | chr5.1:79986238-79986257 | MS.gene38110:intron | 30.0% | |
| GTGTATACTTAGTTGAATCA+TGG | + | chr5.1:79988858-79988877 | MS.gene38110:intron | 30.0% | |
| TAAAATCTCCGAGTTAGAAA+AGG | + | chr5.1:79985331-79985350 | MS.gene38110:intron | 30.0% | |
| TAGATACATAAGTGTTTGCT+TGG | + | chr5.1:79985228-79985247 | MS.gene38110:intron | 30.0% | |
| TCGATACGAAAAAACTTACA+AGG | + | chr5.1:79985002-79985021 | MS.gene38110:intron | 30.0% | |
| TCTAGTACATATCACTATAC+TGG | + | chr5.1:79987325-79987344 | MS.gene38110:intron | 30.0% | |
| TCTATGATAGGTATATAAGC+GGG | - | chr5.1:79989222-79989241 | None:intergenic | 30.0% | |
| TGAGTTTGATAAAATTGCAG+TGG | + | chr5.1:79986371-79986390 | MS.gene38110:intron | 30.0% | |
| TGATATATTCAGGAGACTTA+GGG | + | chr5.1:79988550-79988569 | MS.gene38110:intron | 30.0% | |
| TGTATGTTAGGATGAATGAT+AGG | + | chr5.1:79988450-79988469 | MS.gene38110:intron | 30.0% | |
| TTAGGATGAATGATAGGATA+AGG | + | chr5.1:79988456-79988475 | MS.gene38110:intron | 30.0% | |
| TTTACCTTTGTCAACATTAG+TGG | + | chr5.1:79986842-79986861 | MS.gene38110:intron | 30.0% | |
| TTTGAAGATGTGAATGTGAA+AGG | - | chr5.1:79983807-79983826 | None:intergenic | 30.0% | |
| ! | AACCAATTTTCATCTTTCTC+GGG | - | chr5.1:79986161-79986180 | None:intergenic | 30.0% |
| ! | AGAAAAGGATGAAAACGTTT+TGG | + | chr5.1:79985346-79985365 | MS.gene38110:intron | 30.0% |
| ! | AGTGGTATTTACCATGATTT+TGG | + | chr5.1:79986389-79986408 | MS.gene38110:intron | 30.0% |
| ! | CAGATTGTTTGTTGAAATCA+CGG | - | chr5.1:79986459-79986478 | None:intergenic | 30.0% |
| ! | CTAACTATGTATCGATCAAT+TGG | - | chr5.1:79985211-79985230 | None:intergenic | 30.0% |
| ! | CTGAACCTCATTGATAATAT+TGG | + | chr5.1:79988720-79988739 | MS.gene38110:intron | 30.0% |
| ! | GAATTGATTCTACTTGAACT+TGG | + | chr5.1:79984592-79984611 | MS.gene38110:intron | 30.0% |
| ! | GGCAGTTAAAAGTGTAATTT+CGG | - | chr5.1:79987252-79987271 | None:intergenic | 30.0% |
| ! | GTGCTGAATTTAAAACGAAA+AGG | - | chr5.1:79988989-79989008 | None:intergenic | 30.0% |
| ! | GTTTTCATCCTTTTCTAACT+CGG | - | chr5.1:79985342-79985361 | None:intergenic | 30.0% |
| ! | TTCAGCAGCAATTTTATAAC+TGG | - | chr5.1:79989592-79989611 | None:intergenic | 30.0% |
| ! | TTCTGGTGTTTCTTTTTCTA+TGG | - | chr5.1:79983943-79983962 | None:intergenic | 30.0% |
| ! | TTTGTGTAGTGAGTGATTTT+GGG | - | chr5.1:79983863-79983882 | None:intergenic | 30.0% |
| !! | AAGTAGCTTTGAAATGAACA+CGG | - | chr5.1:79986691-79986710 | None:intergenic | 30.0% |
| !! | AGATTCAATTCTTTTTGGGA+AGG | - | chr5.1:79987941-79987960 | None:intergenic | 30.0% |
| !! | ATTCAATTCTTTTTGGGAAG+GGG | - | chr5.1:79987939-79987958 | None:intergenic | 30.0% |
| !! | CTAGTTAGAATCACTTTTAG+AGG | + | chr5.1:79986289-79986308 | MS.gene38110:intron | 30.0% |
| !! | GATTCAATTCTTTTTGGGAA+GGG | - | chr5.1:79987940-79987959 | None:intergenic | 30.0% |
| !! | TCTCATCCTTTTTCACATTA+TGG | + | chr5.1:79988221-79988240 | MS.gene38110:intron | 30.0% |
| !!! | AGTGACTGTACTCTTTTTTA+TGG | - | chr5.1:79985633-79985652 | None:intergenic | 30.0% |
| !!! | CTGTTTTGGATTTGTTATTG+TGG | + | chr5.1:79986946-79986965 | MS.gene38110:intron | 30.0% |
| !!! | GTTTGTTTTTTAGCCTGTTT+TGG | + | chr5.1:79986932-79986951 | MS.gene38110:intron | 30.0% |
| !!! | TTCTTTTGGGTTGGTTTTTT+TGG | + | chr5.1:79987055-79987074 | MS.gene38110:intron | 30.0% |
| AAAAAACAAACAGTCGCATC+AGG | - | chr5.1:79986923-79986942 | None:intergenic | 35.0% | |
| AAAAGCAGAACACATACCTT+TGG | - | chr5.1:79986644-79986663 | None:intergenic | 35.0% | |
| AAACTTGTAGTGACTGACAT+TGG | + | chr5.1:79987360-79987379 | MS.gene38110:intron | 35.0% | |
| AAAGCAATGAATGAGCATTC+AGG | + | chr5.1:79988309-79988328 | MS.gene38110:intron | 35.0% | |
| AAAGCAGAACACATACCTTT+GGG | - | chr5.1:79986643-79986662 | None:intergenic | 35.0% | |
| AAATAAGGGACCGTTTCAAT+TGG | - | chr5.1:79984684-79984703 | None:intergenic | 35.0% | |
| AACGCAAACCACATAGTATA+AGG | - | chr5.1:79987142-79987161 | None:intergenic | 35.0% | |
| AAGCAATGAATGAGCATTCA+GGG | + | chr5.1:79988310-79988329 | MS.gene38110:intron | 35.0% | |
| AAGCTTGTCAAGGTAGTTTA+TGG | - | chr5.1:79984802-79984821 | None:intergenic | 35.0% | |
| AATGCAATTGAAGAAGCTGA+TGG | + | chr5.1:79984077-79984096 | MS.gene38110:CDS | 35.0% | |
| ACATGTTTGAGGGATTAAAG+TGG | + | chr5.1:79988891-79988910 | MS.gene38110:intron | 35.0% | |
| ACATTTGGACTAAAAACTGG+AGG | + | chr5.1:79989437-79989456 | MS.gene38110:CDS | 35.0% | |
| ACCCATAAATCCTGAAATGA+AGG | + | chr5.1:79988688-79988707 | MS.gene38110:intron | 35.0% | |
| ACCTATCATAGAGAAAAGGA+AGG | + | chr5.1:79989230-79989249 | MS.gene38110:CDS | 35.0% | |
| AGCAAGGATGTTTGTATGTT+AGG | + | chr5.1:79988438-79988457 | MS.gene38110:intron | 35.0% | |
| ATACTTGATTTCGACACGTT+TGG | - | chr5.1:79986340-79986359 | None:intergenic | 35.0% | |
| ATAGAACGAAAGACATTGAG+CGG | - | chr5.1:79986543-79986562 | None:intergenic | 35.0% | |
| ATCACACCATTTCTTGAATC+GGG | - | chr5.1:79988177-79988196 | None:intergenic | 35.0% | |
| ATGAAACCAGTGTTTGTAGA+TGG | + | chr5.1:79988413-79988432 | MS.gene38110:intron | 35.0% | |
| ATGTTTCTCTCTATGCTATC+TGG | + | chr5.1:79987821-79987840 | MS.gene38110:intron | 35.0% | |
| CATCACACCATTTCTTGAAT+CGG | - | chr5.1:79988178-79988197 | None:intergenic | 35.0% | |
| CGATAATTGAAATGCAAGGT+TGG | - | chr5.1:79986601-79986620 | None:intergenic | 35.0% | |
| GAATAACACCTGTGATGATT+TGG | + | chr5.1:79988478-79988497 | MS.gene38110:intron | 35.0% | |
| GAATGTCAGAAATATAGGTG+TGG | + | chr5.1:79986033-79986052 | MS.gene38110:intron | 35.0% | |
| GAGTTGGATTCAAATTGAGT+TGG | + | chr5.1:79984471-79984490 | MS.gene38110:intron | 35.0% | |
| GCCTTCATTTCAGGATTTAT+GGG | - | chr5.1:79988692-79988711 | None:intergenic | 35.0% | |
| GTCTTTCGTTCTATATGTTC+AGG | + | chr5.1:79986549-79986568 | MS.gene38110:intron | 35.0% | |
| TAAGAGGACAAAATATGACG+AGG | - | chr5.1:79985828-79985847 | None:intergenic | 35.0% | |
| TATTGTGTGCACTTACTGAA+TGG | - | chr5.1:79987528-79987547 | None:intergenic | 35.0% | |
| TCAAGTAGAATCAATTCTGG+AGG | - | chr5.1:79984589-79984608 | None:intergenic | 35.0% | |
| TCAGTAAGTGCACACAATAA+TGG | + | chr5.1:79987529-79987548 | MS.gene38110:intron | 35.0% | |
| TCTATTCAATTTCAGTCGTG+TGG | + | chr5.1:79986897-79986916 | MS.gene38110:intron | 35.0% | |
| TCTGTTGTAGGTTCAAAAAC+AGG | + | chr5.1:79988121-79988140 | MS.gene38110:intron | 35.0% | |
| TGAAACCAGTGTTTGTAGAT+GGG | + | chr5.1:79988414-79988433 | MS.gene38110:intron | 35.0% | |
| TGCCTTCATTTCAGGATTTA+TGG | - | chr5.1:79988693-79988712 | None:intergenic | 35.0% | |
| TGGTTAAGAGTCCAATTCTT+TGG | + | chr5.1:79987566-79987585 | MS.gene38110:intron | 35.0% | |
| TTAGAGCTTCACCAAAATCA+TGG | - | chr5.1:79986403-79986422 | None:intergenic | 35.0% | |
| TTCCCGAGAAAGATGAAAAT+TGG | + | chr5.1:79986156-79986175 | MS.gene38110:intron | 35.0% | |
| TTGTTATGACTCGTTGAAAG+TGG | - | chr5.1:79983908-79983927 | None:intergenic | 35.0% | |
| TTTCATGCTTGCCTAAACTA+TGG | + | chr5.1:79989166-79989185 | MS.gene38110:intron | 35.0% | |
| ! | ACAAAGGGCATATATACTAC+AGG | - | chr5.1:79986870-79986889 | None:intergenic | 35.0% |
| ! | ATACACGAAACTGACTCAAT+TGG | - | chr5.1:79988844-79988863 | None:intergenic | 35.0% |
| ! | ATGTTGGGAAAACTGACTTA+AGG | - | chr5.1:79985666-79985685 | None:intergenic | 35.0% |
| ! | ATTCGGTTTGATATCATGTC+TGG | + | chr5.1:79985711-79985730 | MS.gene38110:intron | 35.0% |
| ! | CTTCATCTCTTAGACTTGTT+TGG | + | chr5.1:79986997-79987016 | MS.gene38110:intron | 35.0% |
| ! | GAGCAGTCATACTTGATTTT+TGG | + | chr5.1:79984516-79984535 | MS.gene38110:intron | 35.0% |
| ! | GCTTCTACTTCATCTTTTGT+CGG | + | chr5.1:79985431-79985450 | MS.gene38110:intron | 35.0% |
| ! | GTTTGTGTAGTGAGTGATTT+TGG | - | chr5.1:79983864-79983883 | None:intergenic | 35.0% |
| ! | TATGATAGGGGTACAACATT+TGG | + | chr5.1:79989422-79989441 | MS.gene38110:CDS | 35.0% |
| ! | TCCTTCCTTTTCTCTATGAT+AGG | - | chr5.1:79989234-79989253 | None:intergenic | 35.0% |
| ! | TTGTGTAGTGAGTGATTTTG+GGG | - | chr5.1:79983862-79983881 | None:intergenic | 35.0% |
| !! | CAGTCATACTTGATTTTTGG+AGG | + | chr5.1:79984519-79984538 | MS.gene38110:intron | 35.0% |
| !! | GCGCTGATATTTTAAGCATA+GGG | + | chr5.1:79987735-79987754 | MS.gene38110:intron | 35.0% |
| !! | TAGAATTTTGGCACAGTCTA+AGG | - | chr5.1:79985489-79985508 | None:intergenic | 35.0% |
| !! | TGGATTTGTTATTGTGGTTC+TGG | + | chr5.1:79986952-79986971 | MS.gene38110:intron | 35.0% |
| !!! | ATGTCTGGTTTTCCAACATA+TGG | + | chr5.1:79985726-79985745 | MS.gene38110:intron | 35.0% |
| !!! | CTTATGTTGCCACTGTTTTT+TGG | + | chr5.1:79989390-79989409 | MS.gene38110:intron | 35.0% |
| !!! | GGTTTTGGTTAGAATTTAGC+TGG | + | chr5.1:79986177-79986196 | MS.gene38110:intron | 35.0% |
| !!! | TTTGGGTTGGTTTTTTTGGT+GGG | + | chr5.1:79987059-79987078 | MS.gene38110:intron | 35.0% |
| !!! | TTTTGGGTTGGTTTTTTTGG+TGG | + | chr5.1:79987058-79987077 | MS.gene38110:intron | 35.0% |
| AATGTAAGCAGGGGTTAAGT+CGG | - | chr5.1:79987482-79987501 | None:intergenic | 40.0% | |
| ACAAGTCCAAGTGTCAATGA+TGG | + | chr5.1:79985925-79985944 | MS.gene38110:intron | 40.0% | |
| AGATGCATGCATTAACCCAA+AGG | + | chr5.1:79989671-79989690 | MS.gene38110:CDS | 40.0% | |
| AGTGACTGACATTGGATAAC+AGG | + | chr5.1:79987368-79987387 | MS.gene38110:intron | 40.0% | |
| ATAGGATGCTGCAAGTATGT+TGG | - | chr5.1:79985682-79985701 | None:intergenic | 40.0% | |
| ATGCTTCTTTCCTTTGCTAC+TGG | + | chr5.1:79989072-79989091 | MS.gene38110:CDS | 40.0% | |
| CAAGCAATTACCAGTAGCAA+AGG | - | chr5.1:79989085-79989104 | None:intergenic | 40.0% | |
| CACTATTGCCAAATCATCAC+AGG | - | chr5.1:79988489-79988508 | None:intergenic | 40.0% | |
| CATCAAAAGAGAGAGAGCAA+TGG | - | chr5.1:79985408-79985427 | None:intergenic | 40.0% | |
| CATGCATTAACCCAAAGGAA+TGG | + | chr5.1:79989676-79989695 | MS.gene38110:CDS | 40.0% | |
| CCAATAGAAGCAAACTCAAG+AGG | - | chr5.1:79987394-79987413 | None:intergenic | 40.0% | |
| CCTCCTCAAAAATGTAAGCA+GGG | - | chr5.1:79987492-79987511 | None:intergenic | 40.0% | |
| CTCCTCAAAAATGTAAGCAG+GGG | - | chr5.1:79987491-79987510 | None:intergenic | 40.0% | |
| CTTGGTTCCTTTGATATGTG+TGG | + | chr5.1:79987713-79987732 | MS.gene38110:intron | 40.0% | |
| GCTTTCTGATGATCTGTGAA+GGG | - | chr5.1:79989261-79989280 | None:intergenic | 40.0% | |
| GGATCCACTAATGTTGACAA+AGG | - | chr5.1:79986849-79986868 | None:intergenic | 40.0% | |
| GTAGGACAGTTGAGAAATTC+TGG | + | chr5.1:79987988-79988007 | MS.gene38110:intron | 40.0% | |
| TAGGATGCTGCAAGTATGTT+GGG | - | chr5.1:79985681-79985700 | None:intergenic | 40.0% | |
| TCACACCATTTCTTGAATCG+GGG | - | chr5.1:79988176-79988195 | None:intergenic | 40.0% | |
| TCACAGATCATCAGAAAGCA+TGG | + | chr5.1:79989262-79989281 | MS.gene38110:CDS | 40.0% | |
| TCCTCCTCAAAAATGTAAGC+AGG | - | chr5.1:79987493-79987512 | None:intergenic | 40.0% | |
| TCCTCTTACCCTATGAAACA+CGG | + | chr5.1:79985840-79985859 | MS.gene38110:intron | 40.0% | |
| TCTGCAAGCAACCATAGTTT+AGG | - | chr5.1:79989180-79989199 | None:intergenic | 40.0% | |
| TGCTTTCTGATGATCTGTGA+AGG | - | chr5.1:79989262-79989281 | None:intergenic | 40.0% | |
| TGTGAATGTGAAAGGAGTGA+TGG | - | chr5.1:79983799-79983818 | None:intergenic | 40.0% | |
| TTGAAAGTGGTGTGAAGATG+TGG | - | chr5.1:79983895-79983914 | None:intergenic | 40.0% | |
| TTGGCTGCAGGTATATGATA+GGG | + | chr5.1:79989409-79989428 | MS.gene38110:intron | 40.0% | |
| TTTACCCCCGATTCAAGAAA+TGG | + | chr5.1:79988168-79988187 | MS.gene38110:CDS | 40.0% | |
| TTTCTTGAATCGGGGGTAAA+AGG | - | chr5.1:79988168-79988187 | None:intergenic | 40.0% | |
| TTTGGCTGCAGGTATATGAT+AGG | + | chr5.1:79989408-79989427 | MS.gene38110:intron | 40.0% | |
| ! | AAAGGAGTGATGGAGTAAGA+AGG | - | chr5.1:79983789-79983808 | None:intergenic | 40.0% |
| ! | AAATTCAGCACCGAGATGAA+AGG | + | chr5.1:79988998-79989017 | MS.gene38110:intron | 40.0% |
| ! | AACCCCTGCTTACATTTTTG+AGG | + | chr5.1:79987486-79987505 | MS.gene38110:CDS | 40.0% |
| ! | ATTCATTTTGCAGATGCTCC+TGG | + | chr5.1:79987424-79987443 | MS.gene38110:intron | 40.0% |
| ! | CCTCTTGAGTTTGCTTCTAT+TGG | + | chr5.1:79987391-79987410 | MS.gene38110:intron | 40.0% |
| ! | GCTCTATTCCTTTTCAGATC+AGG | + | chr5.1:79989361-79989380 | MS.gene38110:intron | 40.0% |
| ! | GGAAAACTGACTTAAGGACA+TGG | - | chr5.1:79985660-79985679 | None:intergenic | 40.0% |
| ! | TGTGTAGTGAGTGATTTTGG+GGG | - | chr5.1:79983861-79983880 | None:intergenic | 40.0% |
| !! | GCAATCTTGTTCTTTTGGGT+TGG | + | chr5.1:79987046-79987065 | MS.gene38110:intron | 40.0% |
| !! | GGTGTGAAGATGTGGTTTTA+CGG | - | chr5.1:79983887-79983906 | None:intergenic | 40.0% |
| !! | GTGTGAAGATGTGGTTTTAC+GGG | - | chr5.1:79983886-79983905 | None:intergenic | 40.0% |
| !! | GTTATTGTGGTTCTGGTGTT+TGG | + | chr5.1:79986959-79986978 | MS.gene38110:intron | 40.0% |
| !! | TCTTCAAGATGGTGCTGTTT+GGG | + | chr5.1:79984163-79984182 | MS.gene38110:CDS | 40.0% |
| !! | TTCTTCAAGATGGTGCTGTT+TGG | + | chr5.1:79984162-79984181 | MS.gene38110:CDS | 40.0% |
| !!! | CTGGTTTTGCAGTTTCAGAT+GGG | + | chr5.1:79987666-79987685 | MS.gene38110:intron | 40.0% |
| !!! | GGCGCTGATATTTTAAGCAT+AGG | + | chr5.1:79987734-79987753 | MS.gene38110:intron | 40.0% |
| !!! | TCTGGTTTTGCAGTTTCAGA+TGG | + | chr5.1:79987665-79987684 | MS.gene38110:intron | 40.0% |
| !!! | TTGGGTTGGTTTTTTTGGTG+GGG | + | chr5.1:79987060-79987079 | MS.gene38110:intron | 40.0% |
| AAATGCAAGGTTGGGGCAAA+TGG | - | chr5.1:79986592-79986611 | None:intergenic | 45.0% | |
| AAGCATGGCAACAATTGCGA+AGG | + | chr5.1:79989277-79989296 | MS.gene38110:CDS | 45.0% | |
| AATCCCTCAAACATGTCACG+CGG | - | chr5.1:79988887-79988906 | None:intergenic | 45.0% | |
| AATGCAAGGTTGGGGCAAAT+GGG | - | chr5.1:79986591-79986610 | None:intergenic | 45.0% | |
| AGCATGGCAACAATTGCGAA+GGG | + | chr5.1:79989278-79989297 | MS.gene38110:CDS | 45.0% | |
| ATCAGCGCCACACATATCAA+AGG | - | chr5.1:79987723-79987742 | None:intergenic | 45.0% | |
| ATTGAGCCACATATGACGTC+AGG | - | chr5.1:79984950-79984969 | None:intergenic | 45.0% | |
| CAAGTCCTCTCCTTTCATCT+CGG | - | chr5.1:79989011-79989030 | None:intergenic | 45.0% | |
| CACACCATTTCTTGAATCGG+GGG | - | chr5.1:79988175-79988194 | None:intergenic | 45.0% | |
| CAGAAGTAGGAAGCGAAGAA+TGG | + | chr5.1:79989640-79989659 | MS.gene38110:CDS | 45.0% | |
| CATTCTTCGCTTCCTACTTC+TGG | - | chr5.1:79989642-79989661 | None:intergenic | 45.0% | |
| CGCTTGTTTATGCTCACTGA+TGG | + | chr5.1:79986120-79986139 | MS.gene38110:intron | 45.0% | |
| CTAATTCCGGCAGCGAAAAA+CGG | - | chr5.1:79984299-79984318 | None:intergenic | 45.0% | |
| GAAGATGTTTGGTCAAGACC+TGG | + | chr5.1:79984116-79984135 | MS.gene38110:CDS | 45.0% | |
| GCAATTGAAGAAGCTGATGG+TGG | + | chr5.1:79984080-79984099 | MS.gene38110:CDS | 45.0% | |
| GCTTCATGTGCCTTCATTTC+AGG | - | chr5.1:79988701-79988720 | None:intergenic | 45.0% | |
| GGTAGTTTATGAGAAGAGCG+AGG | + | chr5.1:79988571-79988590 | MS.gene38110:intron | 45.0% | |
| GTGTTTGTAGATGGGTAGCA+AGG | + | chr5.1:79988422-79988441 | MS.gene38110:intron | 45.0% | |
| TACCTGCAGCCAAAAAACAG+TGG | - | chr5.1:79989402-79989421 | None:intergenic | 45.0% | |
| TCCAGTGTCCGTGTTTCATA+GGG | - | chr5.1:79985851-79985870 | None:intergenic | 45.0% | |
| TCCGTGTTTCATAGGGTAAG+AGG | - | chr5.1:79985844-79985863 | None:intergenic | 45.0% | |
| TGCTACCCATCTACAAACAC+TGG | - | chr5.1:79988422-79988441 | None:intergenic | 45.0% | |
| TGGCTGCAGGTATATGATAG+GGG | + | chr5.1:79989410-79989429 | MS.gene38110:intron | 45.0% | |
| TGTGTGCAGAAACCAGAAGT+AGG | + | chr5.1:79989627-79989646 | MS.gene38110:intron | 45.0% | |
| TTAGCAGCACGATAAGCATC+AGG | - | chr5.1:79984233-79984252 | None:intergenic | 45.0% | |
| TTAGTCCCTGACGTCATATG+TGG | + | chr5.1:79984941-79984960 | MS.gene38110:intron | 45.0% | |
| TTAGTGACTAGGGGTCTGTT+TGG | - | chr5.1:79984866-79984885 | None:intergenic | 45.0% | |
| TTGAATCGGGGGTAAAAGGT+AGG | - | chr5.1:79988164-79988183 | None:intergenic | 45.0% | |
| TTGAGCCACATATGACGTCA+GGG | - | chr5.1:79984949-79984968 | None:intergenic | 45.0% | |
| ! | ACACATACCTTTGGGAGCAT+CGG | - | chr5.1:79986635-79986654 | None:intergenic | 45.0% |
| ! | CTTCTCGAATCGAGCTCTAA+CGG | - | chr5.1:79984027-79984046 | None:intergenic | 45.0% |
| ! | GATGCTTATCGTGCTGCTAA+GGG | + | chr5.1:79984233-79984252 | MS.gene38110:CDS | 45.0% |
| ! | TGATGCTTATCGTGCTGCTA+AGG | + | chr5.1:79984232-79984251 | MS.gene38110:CDS | 45.0% |
| ! | TTTGAAACCGATGCTCCCAA+AGG | + | chr5.1:79986625-79986644 | MS.gene38110:CDS | 45.0% |
| !! | ATTCTTTTTGGGAAGGGGTG+CGG | - | chr5.1:79987934-79987953 | None:intergenic | 45.0% |
| !! | ATTGAAGAAGCTGATGGTGG+TGG | + | chr5.1:79984083-79984102 | MS.gene38110:CDS | 45.0% |
| !! | CAAGTGTCAATGATGGACAC+CGG | + | chr5.1:79985932-79985951 | MS.gene38110:intron | 45.0% |
| !! | CCCTGCTTACATTTTTGAGG+AGG | + | chr5.1:79987489-79987508 | MS.gene38110:CDS | 45.0% |
| !! | GTTGGGGCAAATGGGTTTTT+GGG | - | chr5.1:79986583-79986602 | None:intergenic | 45.0% |
| ACCCTATGAAACACGGACAC+TGG | + | chr5.1:79985847-79985866 | MS.gene38110:intron | 50.0% | |
| AGAGACAATAGCAGCGACGT+AGG | + | chr5.1:79985123-79985142 | MS.gene38110:intron | 50.0% | |
| ATGCCGCGGAGAAATGTATC+GGG | - | chr5.1:79983975-79983994 | None:intergenic | 50.0% | |
| CGAGATGAAAGGAGAGGACT+TGG | + | chr5.1:79989009-79989028 | MS.gene38110:CDS | 50.0% | |
| CGGTGTCCATCATTGACACT+TGG | - | chr5.1:79985934-79985953 | None:intergenic | 50.0% | |
| CTGGACACAACACATGACAC+CGG | + | chr5.1:79985866-79985885 | MS.gene38110:intron | 50.0% | |
| GACTAGGGGTCTGTTTGGAT+TGG | - | chr5.1:79984861-79984880 | None:intergenic | 50.0% | |
| GATGAAAGGAGAGGACTTGG+AGG | + | chr5.1:79989012-79989031 | MS.gene38110:CDS | 50.0% | |
| GATGCCGCGGAGAAATGTAT+CGG | - | chr5.1:79983976-79983995 | None:intergenic | 50.0% | |
| GATGTTTGGTCAAGACCTGG+TGG | + | chr5.1:79984119-79984138 | MS.gene38110:CDS | 50.0% | |
| GCACCTAGACAATGGTGGTT+CGG | + | chr5.1:79987448-79987467 | MS.gene38110:CDS | 50.0% | |
| GCATGGCAACAATTGCGAAG+GGG | + | chr5.1:79989279-79989298 | MS.gene38110:CDS | 50.0% | |
| GCTGCATGTGTTGTGTTCCA+TGG | + | chr5.1:79985789-79985808 | MS.gene38110:intron | 50.0% | |
| GTCCAGTGTCCGTGTTTCAT+AGG | - | chr5.1:79985852-79985871 | None:intergenic | 50.0% | |
| TCCTGGAAGAGCAGCAAACA+TGG | - | chr5.1:79986797-79986816 | None:intergenic | 50.0% | |
| TTGCCGCGTGACATGTTTGA+GGG | + | chr5.1:79988881-79988900 | MS.gene38110:intron | 50.0% | |
| ! | ACGGTGTGCGACCATGATTT+TGG | - | chr5.1:79986440-79986459 | None:intergenic | 50.0% |
| ! | TCCATGTTTGCTGCTCTTCC+AGG | + | chr5.1:79986793-79986812 | MS.gene38110:intron | 50.0% |
| ! | TTTCTCTCCCACTGACTGCT+CGG | + | chr5.1:79989480-79989499 | MS.gene38110:CDS | 50.0% |
| !! | CTAGACAATGGTGGTTCGGT+GGG | + | chr5.1:79987452-79987471 | MS.gene38110:CDS | 50.0% |
| !! | GGTTGGGGCAAATGGGTTTT+TGG | - | chr5.1:79986584-79986603 | None:intergenic | 50.0% |
| !! | TAGACAATGGTGGTTCGGTG+GGG | + | chr5.1:79987453-79987472 | MS.gene38110:CDS | 50.0% |
| !!! | TGCCACTGTTTTTTGGCTGC+AGG | + | chr5.1:79989397-79989416 | MS.gene38110:intron | 50.0% |
| ACACCCCTGGGATGAAGTGT+CGG | + | chr5.1:79985955-79985974 | MS.gene38110:intron | 55.0% | |
| AGTGTTTGCTTGGTTGCGCG+TGG | + | chr5.1:79985238-79985257 | MS.gene38110:intron | 55.0% | |
| ATTCCCACCGAGCAGTCAGT+GGG | - | chr5.1:79989490-79989509 | None:intergenic | 55.0% | |
| CACCATTGTCTAGGTGCTCC+AGG | - | chr5.1:79987445-79987464 | None:intergenic | 55.0% | |
| CCACCGAACCACCATTGTCT+AGG | - | chr5.1:79987454-79987473 | None:intergenic | 55.0% | |
| GAGGCAGACTGTTAACGCCA+TGG | - | chr5.1:79985809-79985828 | None:intergenic | 55.0% | |
| GCAGCACGATAAGCATCAGG+TGG | - | chr5.1:79984230-79984249 | None:intergenic | 55.0% | |
| GCGAAAAACGGAACAGGTCC+CGG | - | chr5.1:79984287-79984306 | None:intergenic | 55.0% | |
| GGGTTCCAGTGATCAGAAGC+CGG | + | chr5.1:79984265-79984284 | MS.gene38110:CDS | 55.0% | |
| GGTTCCAGTGATCAGAAGCC+GGG | + | chr5.1:79984266-79984285 | MS.gene38110:CDS | 55.0% | |
| GTTGCCGCGTGACATGTTTG+AGG | + | chr5.1:79988880-79988899 | MS.gene38110:intron | 55.0% | |
| GTTTGGTCAAGACCTGGTGG+TGG | + | chr5.1:79984122-79984141 | MS.gene38110:CDS | 55.0% | |
| TATTCCCACCGAGCAGTCAG+TGG | - | chr5.1:79989491-79989510 | None:intergenic | 55.0% | |
| TGCCGCGGAGAAATGTATCG+GGG | - | chr5.1:79983974-79983993 | None:intergenic | 55.0% | |
| ! | AGCTCTAACGGAAGATGCCG+CGG | - | chr5.1:79984015-79984034 | None:intergenic | 55.0% |
| ! | CAGCACCGAGATGAAAGGAG+AGG | + | chr5.1:79989003-79989022 | MS.gene38110:intron | 55.0% |
| ! | CCTAGACAATGGTGGTTCGG+TGG | + | chr5.1:79987451-79987470 | MS.gene38110:CDS | 55.0% |
| ! | CTCCTGGAGCACCTAGACAA+TGG | + | chr5.1:79987440-79987459 | MS.gene38110:CDS | 55.0% |
| ! | CTGGAGCACCTAGACAATGG+TGG | + | chr5.1:79987443-79987462 | MS.gene38110:CDS | 55.0% |
| ! | GGAAGGGGTGCGGATGTAAA+AGG | - | chr5.1:79987924-79987943 | None:intergenic | 55.0% |
| ! | GTATCGGGGCGTTCTGATTC+TGG | - | chr5.1:79983960-79983979 | None:intergenic | 55.0% |
| !! | AAGCACCGACACTTCATCCC+AGG | - | chr5.1:79985963-79985982 | None:intergenic | 55.0% |
| !! | AGACAATGGTGGTTCGGTGG+GGG | + | chr5.1:79987454-79987473 | MS.gene38110:CDS | 55.0% |
| !! | AGCACCGACACTTCATCCCA+GGG | - | chr5.1:79985962-79985981 | None:intergenic | 55.0% |
| !! | CCTGTTCCGTTTTTCGCTGC+CGG | + | chr5.1:79984290-79984309 | MS.gene38110:CDS | 55.0% |
| !! | GGTGCTGTTTGGGAGAAAGC+TGG | + | chr5.1:79984173-79984192 | MS.gene38110:CDS | 55.0% |
| AGGTCCCGGCTTCTGATCAC+TGG | - | chr5.1:79984273-79984292 | None:intergenic | 60.0% | |
| CCGGCAGCGAAAAACGGAAC+AGG | - | chr5.1:79984293-79984312 | None:intergenic | 60.0% | |
| CGCCCCGATACATTTCTCCG+CGG | + | chr5.1:79983969-79983988 | MS.gene38110:CDS | 60.0% | |
| CTAATCCCACCACCACCACC+AGG | - | chr5.1:79984137-79984156 | None:intergenic | 60.0% | |
| TCTAACGGAAGATGCCGCGG+TGG | - | chr5.1:79984012-79984031 | None:intergenic | 60.0% | |
| ! | GCACCGACACTTCATCCCAG+GGG | - | chr5.1:79985961-79985980 | None:intergenic | 60.0% |
| ! | TCTCCCACTGACTGCTCGGT+GGG | + | chr5.1:79989484-79989503 | MS.gene38110:CDS | 60.0% |
| !! | CAAGACCTGGTGGTGGTGGT+GGG | + | chr5.1:79984129-79984148 | MS.gene38110:CDS | 60.0% |
| !! | CACTTCATCCCAGGGGTGTC+CGG | - | chr5.1:79985954-79985973 | None:intergenic | 60.0% |
| !! | TCAAGACCTGGTGGTGGTGG+TGG | + | chr5.1:79984128-79984147 | MS.gene38110:CDS | 60.0% |
| !! | TGGTCAAGACCTGGTGGTGG+TGG | + | chr5.1:79984125-79984144 | MS.gene38110:CDS | 60.0% |
| CTCCGTCGTTGTCGATGCCG+CGG | - | chr5.1:79983989-79984008 | None:intergenic | 65.0% | |
| GATGGACACCGGACACCCCT+GGG | + | chr5.1:79985943-79985962 | MS.gene38110:intron | 65.0% | |
| ! | CTCTCCCACTGACTGCTCGG+TGG | + | chr5.1:79989483-79989502 | MS.gene38110:CDS | 65.0% |
| ! | TGATGGACACCGGACACCCC+TGG | + | chr5.1:79985942-79985961 | MS.gene38110:intron | 65.0% |
| !! | CTCCGCGGCATCGACAACGA+CGG | + | chr5.1:79983984-79984003 | MS.gene38110:CDS | 65.0% |
| !! | TGCTGCTAAGGGCGCTGCAG+CGG | + | chr5.1:79984244-79984263 | MS.gene38110:CDS | 65.0% |
| CGACAACGACGGAGCCACCG+CGG | + | chr5.1:79983995-79984014 | MS.gene38110:CDS | 70.0% | |
| !! | GCTGCTAAGGGCGCTGCAGC+GGG | + | chr5.1:79984245-79984264 | MS.gene38110:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 79983759 | 79989704 | 79983759 | ID=MS.gene38110 |
| chr5.1 | mRNA | 79983759 | 79989704 | 79983759 | ID=MS.gene38110.t1;Parent=MS.gene38110 |
| chr5.1 | exon | 79983759 | 79984322 | 79983759 | ID=MS.gene38110.t1.exon1;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79983759 | 79984322 | 79983759 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| chr5.1 | exon | 79986571 | 79986646 | 79986571 | ID=MS.gene38110.t1.exon2;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79986571 | 79986646 | 79986571 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| chr5.1 | exon | 79987437 | 79987531 | 79987437 | ID=MS.gene38110.t1.exon3;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79987437 | 79987531 | 79987437 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| chr5.1 | exon | 79988131 | 79988214 | 79988131 | ID=MS.gene38110.t1.exon4;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79988131 | 79988214 | 79988131 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| chr5.1 | exon | 79989006 | 79989093 | 79989006 | ID=MS.gene38110.t1.exon5;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79989006 | 79989093 | 79989006 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| chr5.1 | exon | 79989199 | 79989323 | 79989199 | ID=MS.gene38110.t1.exon6;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79989199 | 79989323 | 79989199 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| chr5.1 | exon | 79989419 | 79989517 | 79989419 | ID=MS.gene38110.t1.exon7;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79989419 | 79989517 | 79989419 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| chr5.1 | exon | 79989636 | 79989704 | 79989636 | ID=MS.gene38110.t1.exon8;Parent=MS.gene38110.t1 |
| chr5.1 | CDS | 79989636 | 79989704 | 79989636 | ID=cds.MS.gene38110.t1;Parent=MS.gene38110.t1 |
| Gene Sequence |
| Protein sequence |
