Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38205.t1 | RHN58117.1 | 95.5 | 1161 | 52 | 0 | 1 | 1161 | 56 | 1216 | 0.00E+00 | 2200.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38205.t1 | Q9C5U2 | 59.5 | 1160 | 414 | 12 | 15 | 1160 | 59 | 1176 | 0.0e+00 | 1255.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38205.t1 | A0A396I5M0 | 95.5 | 1161 | 52 | 0 | 1 | 1161 | 56 | 1216 | 0.0e+00 | 2200.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene38205.t1 | TR | Others |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05492 | MS.gene38205 | 0.802016 | 6.85E-49 | -1.69E-46 |
MS.gene056902 | MS.gene38205 | 0.807918 | 4.00E-50 | -1.69E-46 |
MS.gene057469 | MS.gene38205 | 0.826286 | 2.95E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38205.t1 | MTR_5g097410 | 97.584 | 1159 | 28 | 0 | 1 | 1159 | 56 | 1214 | 0.0 | 2362 |
MS.gene38205.t1 | MTR_3g085130 | 55.681 | 977 | 376 | 15 | 204 | 1157 | 89 | 1031 | 0.0 | 1045 |
MS.gene38205.t1 | MTR_8g080770 | 53.387 | 989 | 403 | 11 | 188 | 1157 | 18 | 967 | 0.0 | 1033 |
MS.gene38205.t1 | MTR_8g106150 | 53.673 | 980 | 398 | 13 | 208 | 1157 | 41 | 994 | 0.0 | 976 |
MS.gene38205.t1 | MTR_8g080770 | 53.803 | 894 | 357 | 10 | 283 | 1157 | 2 | 858 | 0.0 | 941 |
MS.gene38205.t1 | MTR_3g085130 | 55.100 | 853 | 328 | 14 | 328 | 1157 | 1 | 821 | 0.0 | 890 |
MS.gene38205.t1 | MTR_8g106150 | 52.053 | 755 | 320 | 12 | 433 | 1157 | 9 | 751 | 0.0 | 708 |
MS.gene38205.t1 | MTR_2g067240 | 52.063 | 315 | 89 | 3 | 371 | 683 | 1 | 255 | 7.43e-94 | 301 |
MS.gene38205.t1 | MTR_3g105590 | 34.397 | 282 | 168 | 7 | 565 | 837 | 373 | 646 | 1.43e-35 | 147 |
MS.gene38205.t1 | MTR_3g105590 | 35.115 | 131 | 77 | 2 | 1020 | 1143 | 805 | 934 | 8.18e-15 | 80.1 |
MS.gene38205.t1 | MTR_1g013360 | 33.443 | 305 | 169 | 7 | 565 | 837 | 379 | 681 | 2.17e-34 | 143 |
MS.gene38205.t1 | MTR_1g013360 | 34.109 | 129 | 78 | 2 | 1021 | 1143 | 870 | 997 | 1.45e-12 | 72.8 |
MS.gene38205.t1 | MTR_8g075340 | 27.341 | 534 | 311 | 16 | 517 | 1011 | 426 | 921 | 1.38e-33 | 141 |
MS.gene38205.t1 | MTR_5g022470 | 31.288 | 326 | 190 | 6 | 517 | 833 | 464 | 764 | 1.16e-32 | 138 |
MS.gene38205.t1 | MTR_5g022470 | 30.409 | 171 | 69 | 4 | 1001 | 1145 | 1038 | 1184 | 1.89e-12 | 72.4 |
MS.gene38205.t1 | MTR_5g022470 | 31.288 | 326 | 190 | 6 | 517 | 833 | 464 | 764 | 1.19e-32 | 138 |
MS.gene38205.t1 | MTR_5g044100 | 47.917 | 144 | 52 | 3 | 947 | 1090 | 103 | 223 | 5.78e-31 | 122 |
MS.gene38205.t1 | MTR_4g031150 | 26.895 | 409 | 246 | 6 | 556 | 950 | 387 | 756 | 3.11e-28 | 123 |
MS.gene38205.t1 | MTR_7g109150 | 30.389 | 283 | 158 | 5 | 556 | 837 | 338 | 582 | 8.63e-25 | 111 |
MS.gene38205.t1 | MTR_1g087140 | 26.111 | 360 | 216 | 12 | 521 | 853 | 346 | 682 | 2.99e-23 | 107 |
MS.gene38205.t1 | MTR_1g090850 | 25.948 | 343 | 227 | 8 | 521 | 851 | 335 | 662 | 2.68e-20 | 98.2 |
MS.gene38205.t1 | MTR_1g090850 | 32.203 | 177 | 90 | 4 | 984 | 1153 | 892 | 1045 | 1.29e-13 | 76.3 |
MS.gene38205.t1 | MTR_1g073840 | 22.103 | 466 | 305 | 12 | 541 | 1000 | 344 | 757 | 4.85e-13 | 73.9 |
MS.gene38205.t1 | MTR_7g116330 | 20.680 | 353 | 232 | 7 | 549 | 897 | 362 | 670 | 9.75e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38205.t1 | AT5G35750 | 59.552 | 1162 | 410 | 14 | 15 | 1160 | 59 | 1176 | 0.0 | 1322 |
MS.gene38205.t1 | AT1G27320 | 56.000 | 950 | 379 | 11 | 221 | 1158 | 107 | 1029 | 0.0 | 1044 |
MS.gene38205.t1 | AT2G01830 | 53.381 | 976 | 397 | 16 | 207 | 1157 | 118 | 1060 | 0.0 | 974 |
MS.gene38205.t1 | AT2G01830 | 53.381 | 976 | 397 | 16 | 207 | 1157 | 106 | 1048 | 0.0 | 973 |
MS.gene38205.t1 | AT2G01830 | 53.381 | 976 | 397 | 16 | 207 | 1157 | 106 | 1048 | 0.0 | 973 |
MS.gene38205.t1 | AT2G01830 | 53.381 | 976 | 397 | 16 | 207 | 1157 | 129 | 1071 | 0.0 | 973 |
MS.gene38205.t1 | AT2G01830 | 53.381 | 976 | 397 | 16 | 207 | 1157 | 106 | 1048 | 0.0 | 973 |
MS.gene38205.t1 | AT2G01830 | 53.381 | 976 | 397 | 16 | 207 | 1157 | 106 | 1048 | 0.0 | 973 |
MS.gene38205.t1 | AT5G10720 | 35.689 | 283 | 149 | 6 | 565 | 847 | 369 | 618 | 5.58e-40 | 161 |
MS.gene38205.t1 | AT5G10720 | 34.615 | 130 | 78 | 3 | 1020 | 1143 | 779 | 907 | 5.55e-13 | 74.3 |
MS.gene38205.t1 | AT2G17820 | 31.098 | 328 | 188 | 6 | 517 | 833 | 453 | 753 | 2.83e-35 | 146 |
MS.gene38205.t1 | AT1G66340 | 30.460 | 348 | 193 | 6 | 556 | 897 | 337 | 641 | 1.36e-33 | 140 |
MS.gene38205.t1 | AT2G40940 | 32.155 | 283 | 153 | 6 | 556 | 837 | 337 | 581 | 1.77e-24 | 110 |
MS.gene38205.t1 | AT2G47430 | 27.273 | 308 | 177 | 10 | 551 | 837 | 384 | 665 | 4.96e-22 | 103 |
MS.gene38205.t1 | AT2G47430 | 35.057 | 174 | 71 | 7 | 995 | 1146 | 956 | 1109 | 7.43e-14 | 77.0 |
MS.gene38205.t1 | AT3G23150 | 24.869 | 382 | 227 | 12 | 559 | 923 | 364 | 702 | 3.95e-12 | 71.2 |
Find 240 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTCCTTGGACAGCATTC+TGG | 0.103589 | 5.3:+78709227 | MS.gene38205:CDS |
ATTAATTACCCGTCCATTTC+TGG | 0.122771 | 5.3:-78711535 | None:intergenic |
ATTGATACACAAACGAATTT+TGG | 0.159316 | 5.3:+78711360 | MS.gene38205:CDS |
CCCTTTGGCCTCTGAGTTCC+AGG | 0.193078 | 5.3:+78710779 | MS.gene38205:CDS |
GTTTGACTGCAGAAAATATT+TGG | 0.207225 | 5.3:+78708011 | MS.gene38205:intron |
GGATGTTGTTTGGTCCTTAT+TGG | 0.219358 | 5.3:+78707430 | MS.gene38205:CDS |
TTGGACTTTAGTAGTTTAAA+AGG | 0.222874 | 5.3:-78708524 | None:intergenic |
AAAGTTTCAAAAGTTAAATT+TGG | 0.231203 | 5.3:+78710464 | MS.gene38205:CDS |
GTTAATGTGTCCGAAGAATT+TGG | 0.236764 | 5.3:+78706567 | MS.gene38205:CDS |
CTTTAGCTCCTTCTGCTCAT+TGG | 0.237386 | 5.3:-78711206 | None:intergenic |
AATTTATCTAGTTTAATTAA+AGG | 0.239445 | 5.3:+78707409 | MS.gene38205:CDS |
TTCATGTATTGGAAGGTATC+TGG | 0.258158 | 5.3:+78708903 | MS.gene38205:intron |
TTTAGCTCCTTCTGCTCATT+GGG | 0.261024 | 5.3:-78711205 | None:intergenic |
CACGTAAGCGGTCTAGATTT+TGG | 0.265877 | 5.3:+78709075 | MS.gene38205:CDS |
ACAGCATTCTGGGCATCCTT+GGG | 0.276319 | 5.3:+78709238 | MS.gene38205:CDS |
GACCTCATGGGAGGAGAAAT+TGG | 0.278166 | 5.3:+78710657 | MS.gene38205:CDS |
TTTGTTATTACCTTTCTTCT+TGG | 0.283122 | 5.3:+78709265 | MS.gene38205:CDS |
TAGGAAACAGCTTCATGTTT+TGG | 0.295445 | 5.3:+78706135 | MS.gene38205:CDS |
ACCCGTCCATTTCTGGCATT+TGG | 0.297045 | 5.3:-78711528 | None:intergenic |
TTGGTTCTGCATGGTTATTT+AGG | 0.298048 | 5.3:+78707635 | MS.gene38205:CDS |
ACCACTCGTGTGAGCAGTTT+GGG | 0.298376 | 5.3:-78709814 | None:intergenic |
TTTCAGTTCATTCACAATAA+AGG | 0.310106 | 5.3:+78710279 | MS.gene38205:intron |
GACAGCATTCTGGGCATCCT+TGG | 0.312293 | 5.3:+78709237 | MS.gene38205:CDS |
CAAATAATTACCAATCTTGT+TGG | 0.322920 | 5.3:+78710161 | MS.gene38205:CDS |
TGAACAAAGTCATCAAGAAT+TGG | 0.326747 | 5.3:-78706637 | None:intergenic |
AAGTACAACACCGAGGTAAT+TGG | 0.329193 | 5.3:-78708543 | None:intergenic |
GGGTGGTAAGGCTGCTCTTA+AGG | 0.331631 | 5.3:+78711462 | MS.gene38205:CDS |
TGTTTGGTAACATTTCTTAC+TGG | 0.332153 | 5.3:+78711722 | MS.gene38205:CDS |
GAAGGTGTTCTGCGAAAATA+TGG | 0.332772 | 5.3:+78711418 | MS.gene38205:CDS |
TCTGAAAAGTCCGATGAAAA+AGG | 0.335369 | 5.3:+78709960 | MS.gene38205:CDS |
TTCTTATAGACAAGGATTCT+TGG | 0.335599 | 5.3:+78711074 | MS.gene38205:CDS |
TGGTTGGACAATTAAGAAAA+TGG | 0.343061 | 5.3:+78708136 | MS.gene38205:CDS |
GACTAGGCTAATCCGGTATA+TGG | 0.343716 | 5.3:+78711651 | MS.gene38205:CDS |
ATTTCCTTGGACAGCATTCT+GGG | 0.350113 | 5.3:+78709228 | MS.gene38205:CDS |
TGGACTTTAGTAGTTTAAAA+GGG | 0.352298 | 5.3:-78708523 | None:intergenic |
ATTATTTGTCGGAAGCGTTT+AGG | 0.353184 | 5.3:-78710146 | None:intergenic |
AATTGCTTGTGGGGAAGAAT+TGG | 0.353403 | 5.3:+78711693 | MS.gene38205:CDS |
CGCTGTTCAGGCGTAGCATC+TGG | 0.360966 | 5.3:-78708596 | None:intergenic |
GAGCAAAACGTTAACCAAAT+AGG | 0.372710 | 5.3:-78706722 | None:intergenic |
TTTGTAAGTGAGCCTGAAAT+TGG | 0.376302 | 5.3:+78710681 | MS.gene38205:CDS |
TACCACTCGTGTGAGCAGTT+TGG | 0.378780 | 5.3:-78709815 | None:intergenic |
ATGTACTAATGAAGCCTCTT+TGG | 0.380444 | 5.3:+78711248 | MS.gene38205:CDS |
CCTCCTTTCATCAATACAAT+TGG | 0.381731 | 5.3:-78706503 | None:intergenic |
TTACCTAAAACACCATTCAT+TGG | 0.382326 | 5.3:-78709648 | None:intergenic |
CAGAATGCTGTCCAAGGAAA+TGG | 0.384642 | 5.3:-78709226 | None:intergenic |
TGAAAGTTCTCCATTCTGAT+AGG | 0.384878 | 5.3:+78708093 | MS.gene38205:CDS |
CGATGACAACTTCAGGTACT+TGG | 0.385643 | 5.3:-78710118 | None:intergenic |
TTTATGTCAGTTGGAATCCT+TGG | 0.387171 | 5.3:+78707616 | MS.gene38205:CDS |
TGGGGCTAAGGTGGGTGGCC+AGG | 0.387928 | 5.3:-78711186 | None:intergenic |
TCGGTACCATACATCGTAAT+AGG | 0.388024 | 5.3:-78709030 | None:intergenic |
GGATCTCCAAATGCCAGAAA+TGG | 0.388575 | 5.3:+78711522 | MS.gene38205:CDS |
AAGCGAATTTCCAACAAGAT+TGG | 0.391875 | 5.3:-78710171 | None:intergenic |
TTTAATTAAAGGATGTTGTT+TGG | 0.394773 | 5.3:+78707420 | MS.gene38205:CDS |
TCTTATAGACAAGGATTCTT+GGG | 0.395654 | 5.3:+78711075 | MS.gene38205:CDS |
TCAAAAGCAGAAGGTAGTTA+AGG | 0.396948 | 5.3:+78707501 | MS.gene38205:CDS |
TGAAGAAGAGCAACTCTATA+CGG | 0.397116 | 5.3:+78711840 | MS.gene38205:CDS |
TACAGAGAATCCCTTGGAAC+TGG | 0.398252 | 5.3:+78711292 | MS.gene38205:CDS |
TCGCGAACATACGGTGGAAC+TGG | 0.403424 | 5.3:+78710603 | MS.gene38205:CDS |
TCTTGTTGGAAATTCGCTTA+AGG | 0.406803 | 5.3:+78710175 | MS.gene38205:CDS |
ACATACGGTGGAACTGGAAT+AGG | 0.407969 | 5.3:+78710609 | MS.gene38205:CDS |
AGCATATGCCTCCATTTCCT+TGG | 0.407983 | 5.3:+78709215 | MS.gene38205:CDS |
GGTACCGATGTTCTTGATAC+TGG | 0.414059 | 5.3:+78709045 | MS.gene38205:CDS |
GAAGAATTGGCAGAGATGTT+TGG | 0.417574 | 5.3:+78711706 | MS.gene38205:CDS |
CGAGCAAGGGCATCTGGAAA+GGG | 0.420999 | 5.3:+78708488 | MS.gene38205:CDS |
AGAATGCTTAAACTTGAATC+AGG | 0.423838 | 5.3:+78710374 | MS.gene38205:CDS |
GGGACAGTATAATGCCAATA+AGG | 0.430051 | 5.3:-78707444 | None:intergenic |
ATACTGTCCCACAAGTTGTC+TGG | 0.431443 | 5.3:+78707457 | MS.gene38205:CDS |
GAACAAAGTCATCAAGAATT+GGG | 0.433982 | 5.3:-78706636 | None:intergenic |
TAGAGTTGCTCTTCTTCAAA+TGG | 0.434245 | 5.3:-78711835 | None:intergenic |
CAGAATCTGTGGATGAGAAA+TGG | 0.436460 | 5.3:+78710745 | MS.gene38205:CDS |
TAAATTGATCTTGCAACATA+CGG | 0.441964 | 5.3:-78707723 | None:intergenic |
GACAGCAATGGTTTGCTGAC+AGG | 0.443901 | 5.3:-78708977 | None:intergenic |
CACAAGTGATGGAACATCAT+AGG | 0.445281 | 5.3:-78708932 | None:intergenic |
AGCTTGGATTATCATTCCCT+TGG | 0.446435 | 5.3:+78706665 | MS.gene38205:CDS |
CTGCTCATTGGGGCTAAGGT+GGG | 0.446711 | 5.3:-78711194 | None:intergenic |
GTATCCATCGACATGATGTC+AGG | 0.447012 | 5.3:+78708272 | MS.gene38205:CDS |
CCTTCTGCTCATTGGGGCTA+AGG | 0.447909 | 5.3:-78711198 | None:intergenic |
GGATCGCCGATGACAACTTC+AGG | 0.448585 | 5.3:-78710125 | None:intergenic |
GACTTTGTTCACATGAAGCT+TGG | 0.449258 | 5.3:+78706649 | MS.gene38205:CDS |
GTAGCTTCAATACGCTGTTC+AGG | 0.450753 | 5.3:-78708608 | None:intergenic |
TGCAGATGTCGCAAAATCTC+AGG | 0.453763 | 5.3:+78709375 | MS.gene38205:CDS |
GAAGAATTTGGAGTTACAAA+AGG | 0.453998 | 5.3:+78706579 | MS.gene38205:CDS |
TAGGAAACAGATGGAAAAGC+TGG | 0.456035 | 5.3:+78710439 | MS.gene38205:CDS |
TCTGATCCTATTACGATGTA+TGG | 0.457715 | 5.3:+78709024 | MS.gene38205:CDS |
GATGAGGGTGTGTGCGATTG+TGG | 0.459371 | 5.3:+78707378 | MS.gene38205:CDS |
CAAGATTGGTAATTATTTGT+CGG | 0.462240 | 5.3:-78710157 | None:intergenic |
TGGAGAATATACAGAGAGTT+CGG | 0.464515 | 5.3:+78708031 | MS.gene38205:CDS |
TTGAGGTGACTAGGCTAATC+CGG | 0.464950 | 5.3:+78711644 | MS.gene38205:CDS |
ACCAGTAGCCTTTGAATGAC+CGG | 0.467332 | 5.3:-78707566 | None:intergenic |
TCTGCTCATTGGGGCTAAGG+TGG | 0.472855 | 5.3:-78711195 | None:intergenic |
CTCATTGGGGCTAAGGTGGG+TGG | 0.473446 | 5.3:-78711191 | None:intergenic |
AGAATGTATTCCAGAAAACT+TGG | 0.474067 | 5.3:+78708184 | MS.gene38205:CDS |
AGGTATGCTGCAAATGTTGA+TGG | 0.474230 | 5.3:+78709758 | MS.gene38205:intron |
CGACAGTTTCACATGAGATC+AGG | 0.474661 | 5.3:+78709622 | MS.gene38205:CDS |
ATCAAAACACTTTGCCAAAG+AGG | 0.475890 | 5.3:-78711262 | None:intergenic |
TGGTGCATATTCATCTTGAA+TGG | 0.477295 | 5.3:-78708216 | None:intergenic |
CATATTTACACCTTTCATGC+AGG | 0.477916 | 5.3:+78710566 | MS.gene38205:CDS |
ATCCTTGTCTATAAGAATCA+TGG | 0.478300 | 5.3:-78711068 | None:intergenic |
TCATGTATTGGAAGGTATCT+GGG | 0.482291 | 5.3:+78708904 | MS.gene38205:intron |
GCGAGCAAGGGCATCTGGAA+AGG | 0.484052 | 5.3:+78708487 | MS.gene38205:CDS |
CTTGTTCTCAGGATCAGATC+AGG | 0.487332 | 5.3:+78706162 | MS.gene38205:CDS |
CAAGGACAGAATGGCGTCAA+AGG | 0.488603 | 5.3:+78711133 | MS.gene38205:CDS |
TTACCTCGTTCTCCATATAC+CGG | 0.488691 | 5.3:-78711663 | None:intergenic |
AATCCATCTGATTGTCATCA+AGG | 0.489725 | 5.3:-78709788 | None:intergenic |
CCCGGTCATTCAAAGGCTAC+TGG | 0.491515 | 5.3:+78707565 | MS.gene38205:CDS |
AATGTTACATATGCTTTCCA+AGG | 0.494279 | 5.3:-78706682 | None:intergenic |
AATAAATCGAATAGCTAAAG+TGG | 0.498068 | 5.3:+78709306 | MS.gene38205:CDS |
ACGATATCACCTGCAGAGGT+TGG | 0.499162 | 5.3:+78710851 | MS.gene38205:CDS |
CGGATTCAACATTGTATGCC+CGG | 0.499645 | 5.3:+78707547 | MS.gene38205:CDS |
CCTCGACTGTTACTAGTAGT+TGG | 0.500006 | 5.3:-78710506 | None:intergenic |
ACAGTCGAGGACACTGGTAT+AGG | 0.500734 | 5.3:+78710519 | MS.gene38205:CDS |
TGTCCAATTGTATTGATGAA+AGG | 0.501841 | 5.3:+78706500 | MS.gene38205:CDS |
CAGCATTCTGGGCATCCTTG+GGG | 0.503392 | 5.3:+78709239 | MS.gene38205:CDS |
AACAAAAGCCAGACAACTTG+TGG | 0.503467 | 5.3:-78707465 | None:intergenic |
CGATATCACCTGCAGAGGTT+GGG | 0.504786 | 5.3:+78710852 | MS.gene38205:CDS |
ACATCCTTCCGCAGTTGACC+AGG | 0.506511 | 5.3:+78707807 | MS.gene38205:CDS |
CTTCAAATGTTGTTAAGTAG+TGG | 0.509859 | 5.3:+78706526 | MS.gene38205:CDS |
TTACTAATGCTCTCAAACCC+TGG | 0.510047 | 5.3:-78710797 | None:intergenic |
TTGGAATCCTTGGTTCTGCA+TGG | 0.513364 | 5.3:+78707626 | MS.gene38205:CDS |
AGTCGTATTTGCTCAAGAAA+CGG | 0.515422 | 5.3:+78708238 | MS.gene38205:CDS |
CAAAATGCATCCTATCAGAA+TGG | 0.515566 | 5.3:-78708103 | None:intergenic |
AGTTCCACATCGCGAACATA+CGG | 0.515602 | 5.3:+78710594 | MS.gene38205:CDS |
TACCTGTGTGGAGGGTGGTA+AGG | 0.516659 | 5.3:+78711450 | MS.gene38205:CDS |
GAAGAGTCCACTTCACATCA+TGG | 0.518980 | 5.3:+78710338 | MS.gene38205:CDS |
ATGGCAGAAGAATAACCCTT+TGG | 0.523166 | 5.3:+78710764 | MS.gene38205:CDS |
CCTGGAACTCAGAGGCCAAA+GGG | 0.527638 | 5.3:-78710779 | None:intergenic |
CAGACATGCCCAACCTCTGC+AGG | 0.530444 | 5.3:-78710860 | None:intergenic |
GGACTTTAGTAGTTTAAAAG+GGG | 0.531138 | 5.3:-78708522 | None:intergenic |
GGTGCATATTCATCTTGAAT+GGG | 0.531343 | 5.3:-78708215 | None:intergenic |
CTGATCTGATCCTGAGAACA+AGG | 0.533568 | 5.3:-78706161 | None:intergenic |
AAATTGATCTTGCAACATAC+GGG | 0.535060 | 5.3:-78707722 | None:intergenic |
GAGTGGTAAAGATCTTATAT+CGG | 0.537674 | 5.3:+78709830 | MS.gene38205:CDS |
GGCTCTCTCATCACACATAG+TGG | 0.539504 | 5.3:-78707701 | None:intergenic |
CGCTACTACAGAGAATCCCT+TGG | 0.539625 | 5.3:+78711286 | MS.gene38205:CDS |
TATTCATCTTGAATGGGCGC+TGG | 0.540279 | 5.3:-78708209 | None:intergenic |
TCCAAATGCCAGAAATGGAC+GGG | 0.542668 | 5.3:+78711527 | MS.gene38205:CDS |
CCTTTGGCCTCTGAGTTCCA+GGG | 0.543146 | 5.3:+78710780 | MS.gene38205:CDS |
ATCAAGAAACAAGGACAGAA+TGG | 0.546253 | 5.3:+78711124 | MS.gene38205:CDS |
TCAGCTGTCATAGCTAGTAT+TGG | 0.554118 | 5.3:-78711751 | None:intergenic |
TAAATGTCTAGTTGACCTCA+TGG | 0.554358 | 5.3:+78710644 | MS.gene38205:CDS |
AGAAGCTTGTCCACAAGTGA+TGG | 0.554573 | 5.3:-78708943 | None:intergenic |
GGCCATGATTCTTATAGACA+AGG | 0.556608 | 5.3:+78711066 | MS.gene38205:CDS |
TTTCAGTATGTCGACGCAGT+TGG | 0.556794 | 5.3:+78711045 | MS.gene38205:intron |
CCAATTGTATTGATGAAAGG+AGG | 0.556888 | 5.3:+78706503 | MS.gene38205:CDS |
AAATATATATCCAAGAAGAA+AGG | 0.557028 | 5.3:-78709275 | None:intergenic |
CTATGATGTTCCATCACTTG+TGG | 0.557856 | 5.3:+78708933 | MS.gene38205:CDS |
AAACAAGCATCAAAATTATG+TGG | 0.560851 | 5.3:-78711496 | None:intergenic |
TTGGAAAGCATATGTAACAT+TGG | 0.562808 | 5.3:+78706684 | MS.gene38205:CDS |
CCAGTAGCCTTTGAATGACC+GGG | 0.563893 | 5.3:-78707565 | None:intergenic |
TAAGCAACACCACTAGTAAG+TGG | 0.564076 | 5.3:-78708065 | None:intergenic |
GTCATACACATTGACAGCAA+TGG | 0.567089 | 5.3:-78708989 | None:intergenic |
AAAACAAGCAGATTGAAGAC+TGG | 0.571664 | 5.3:-78710895 | None:intergenic |
ACAAAAGCCAGACAACTTGT+GGG | 0.571903 | 5.3:-78707464 | None:intergenic |
CCCTGGAACTCAGAGGCCAA+AGG | 0.573447 | 5.3:-78710780 | None:intergenic |
ACACAAGAATAGCGAGAGCA+TGG | 0.573638 | 5.3:-78707765 | None:intergenic |
CAGAAGGAGCTAAAGTCAGT+TGG | 0.574474 | 5.3:+78711214 | MS.gene38205:CDS |
GAGATCAGGACTCCAATGAA+TGG | 0.574560 | 5.3:+78709636 | MS.gene38205:CDS |
AAATATGCGGCTTTGAGCAT+CGG | 0.576359 | 5.3:-78710550 | None:intergenic |
TTGTATGCCCGGTCATTCAA+AGG | 0.577652 | 5.3:+78707558 | MS.gene38205:CDS |
AAAAGGAGAAACAGAATCTG+TGG | 0.578251 | 5.3:+78710734 | MS.gene38205:CDS |
TATCAAGCTAAGATCGAGGC+AGG | 0.579435 | 5.3:+78709870 | MS.gene38205:CDS |
GAACTATCAGCCTGCATGAA+AGG | 0.579814 | 5.3:-78710576 | None:intergenic |
GAAAACATGAGATGCACTGC+AGG | 0.579994 | 5.3:+78709109 | MS.gene38205:CDS |
AGAACATGCAATACATTGAG+TGG | 0.580850 | 5.3:+78710408 | MS.gene38205:CDS |
CCTTAGCCCCAATGAGCAGA+AGG | 0.581226 | 5.3:+78711198 | MS.gene38205:CDS |
CTCCAAATGCCAGAAATGGA+CGG | 0.581688 | 5.3:+78711526 | MS.gene38205:CDS |
TGGTTTGCTGACAGGCAAGC+TGG | 0.582491 | 5.3:-78708969 | None:intergenic |
TTAGCTCCTTCTGCTCATTG+GGG | 0.582725 | 5.3:-78711204 | None:intergenic |
GTCATTCAAAGGCTACTGGT+TGG | 0.583595 | 5.3:+78707569 | MS.gene38205:CDS |
CAGCGTATTGAAGCTACTGT+GGG | 0.584573 | 5.3:+78708614 | MS.gene38205:CDS |
ATTCAAAGGCTACTGGTTGG+CGG | 0.585519 | 5.3:+78707572 | MS.gene38205:CDS |
CAGAGAGTTCGGCATTTGAG+AGG | 0.586906 | 5.3:+78708042 | MS.gene38205:CDS |
ACATTGAGTGGATTTCCTGT+AGG | 0.587511 | 5.3:+78710420 | MS.gene38205:CDS |
TTTCTGATACTTGCAACTCA+AGG | 0.587800 | 5.3:+78710922 | MS.gene38205:CDS |
AAGGAAGAATCAAAAGCAGA+AGG | 0.589976 | 5.3:+78707492 | MS.gene38205:CDS |
GATTTCCTGTAGGAAACAGA+TGG | 0.596201 | 5.3:+78710430 | MS.gene38205:CDS |
GATGCCCAGAATGCTGTCCA+AGG | 0.597141 | 5.3:-78709232 | None:intergenic |
ATCCACCTGCTCCACAAAAG+CGG | 0.599663 | 5.3:+78707527 | MS.gene38205:CDS |
TGACCTTGATGACAATCAGA+TGG | 0.600124 | 5.3:+78709785 | MS.gene38205:CDS |
CAAGCATCAAAATTATGTGG+TGG | 0.600540 | 5.3:-78711493 | None:intergenic |
GTTTCTTGAGCAAATACGAC+TGG | 0.600912 | 5.3:-78708236 | None:intergenic |
GCAGTAGTTACCTGTGTGGA+GGG | 0.602358 | 5.3:+78711442 | MS.gene38205:CDS |
GAATAGCGAGAGCATGGACA+TGG | 0.603489 | 5.3:-78707759 | None:intergenic |
AGCAAGGGCATCTGGAAAGG+GGG | 0.603947 | 5.3:+78708490 | MS.gene38205:CDS |
ATGTTACATATGCTTTCCAA+GGG | 0.605409 | 5.3:-78706681 | None:intergenic |
AGACAAGGATTCTTGGGACA+AGG | 0.605502 | 5.3:+78711081 | MS.gene38205:CDS |
GAGCAAGGGCATCTGGAAAG+GGG | 0.605827 | 5.3:+78708489 | MS.gene38205:CDS |
CTTCCCTGACATCATGTCGA+TGG | 0.606250 | 5.3:-78708276 | None:intergenic |
AAATGTCTAGTTGACCTCAT+GGG | 0.606651 | 5.3:+78710645 | MS.gene38205:CDS |
AAACTTGAATCAGGACATGT+CGG | 0.606659 | 5.3:+78710383 | MS.gene38205:CDS |
TTTGCAATCACAGGTGATGA+GGG | 0.607181 | 5.3:+78707363 | MS.gene38205:intron |
ACAGAGAATCCCTTGGAACT+GGG | 0.608161 | 5.3:+78711293 | MS.gene38205:CDS |
AGCATTCTGGGCATCCTTGG+GGG | 0.608710 | 5.3:+78709240 | MS.gene38205:CDS |
CAAGTACCTGAAGTTGTCAT+CGG | 0.609914 | 5.3:+78710119 | MS.gene38205:CDS |
GACATTGTAACGTTGTAACA+AGG | 0.610027 | 5.3:-78706110 | None:intergenic |
GCCCAAACTGCTCACACGAG+TGG | 0.611642 | 5.3:+78709813 | MS.gene38205:CDS |
TCCACCGTATGTTCGCGATG+TGG | 0.613281 | 5.3:-78710598 | None:intergenic |
GTGAACAGAAAAGTTGCAGA+AGG | 0.613404 | 5.3:+78711400 | MS.gene38205:CDS |
TTTGAGAGGCCACTTACTAG+TGG | 0.613971 | 5.3:+78708056 | MS.gene38205:CDS |
AGGAAACAGATGGAAAAGCT+GGG | 0.614483 | 5.3:+78710440 | MS.gene38205:CDS |
TCTTATATCGGTTATAAGCG+AGG | 0.615675 | 5.3:+78709842 | MS.gene38205:CDS |
CTAGTAACAGTCGAGGACAC+TGG | 0.623583 | 5.3:+78710513 | MS.gene38205:CDS |
TCCACATCGCGAACATACGG+TGG | 0.623794 | 5.3:+78710597 | MS.gene38205:CDS |
TATCCATCGACATGATGTCA+GGG | 0.623915 | 5.3:+78708273 | MS.gene38205:CDS |
GTTACCTGGTCAACTGCGGA+AGG | 0.629231 | 5.3:-78707811 | None:intergenic |
ATGCGGCTTTGAGCATCGGT+AGG | 0.631149 | 5.3:-78710546 | None:intergenic |
CTTGTGTCTACATTTCACCA+TGG | 0.631262 | 5.3:+78707781 | MS.gene38205:CDS |
ACAGCGTATTGAAGCTACTG+TGG | 0.633680 | 5.3:+78708613 | MS.gene38205:CDS |
TAAATAACCATGCAGAACCA+AGG | 0.637583 | 5.3:-78707633 | None:intergenic |
GGCAGGCAAACTAGAACTTG+AGG | 0.639131 | 5.3:+78709887 | MS.gene38205:CDS |
AATGCTGTCCAAGGAAATGG+AGG | 0.639265 | 5.3:-78709223 | None:intergenic |
AGCCTTACCACCCTCCACAC+AGG | 0.641150 | 5.3:-78711452 | None:intergenic |
AGAGCAACTCTATACGGCAG+TGG | 0.641157 | 5.3:+78711846 | MS.gene38205:CDS |
CTACTAAAGTCCAATTACCT+CGG | 0.645725 | 5.3:+78708533 | MS.gene38205:CDS |
TTCTTCGGACACATTAACTG+TGG | 0.646243 | 5.3:-78706562 | None:intergenic |
TACAACGTTACAATGTCAGT+AGG | 0.648876 | 5.3:+78706116 | MS.gene38205:CDS |
GATATCGTGTAACCTCAGCC+CGG | 0.651457 | 5.3:-78710836 | None:intergenic |
CATCGACATGATGTCAGGGA+AGG | 0.652451 | 5.3:+78708277 | MS.gene38205:CDS |
TGTTCAGGCGTAGCATCTGG+AGG | 0.656731 | 5.3:-78708593 | None:intergenic |
GCATGAAAGGTGTAAATATG+CGG | 0.658298 | 5.3:-78710563 | None:intergenic |
TGTCTAGTTGACCTCATGGG+AGG | 0.658386 | 5.3:+78710648 | MS.gene38205:CDS |
ACTGCATCCATGATGTGAAG+TGG | 0.660365 | 5.3:-78710345 | None:intergenic |
AGCAGTAGTTACCTGTGTGG+AGG | 0.662067 | 5.3:+78711441 | MS.gene38205:CDS |
GAAAATGGAAACTGAGAACG+AGG | 0.669396 | 5.3:+78708151 | MS.gene38205:CDS |
ACTTCATCTAGAATTGCATG+TGG | 0.670385 | 5.3:-78709924 | None:intergenic |
GTAGTTACCTGTGTGGAGGG+TGG | 0.673674 | 5.3:+78711445 | MS.gene38205:CDS |
CTGCGGAAGGATGTTTACCA+TGG | 0.679151 | 5.3:-78707798 | None:intergenic |
ACTGGCTTACTACACGTAAG+CGG | 0.680944 | 5.3:+78709063 | MS.gene38205:CDS |
TAAGCCAGTATCAAGAACAT+CGG | 0.681711 | 5.3:-78709049 | None:intergenic |
ATCCAATTTCTCCTCCCATG+AGG | 0.687075 | 5.3:-78710659 | None:intergenic |
TTATACGCAATCAAGAAACA+AGG | 0.692490 | 5.3:+78711115 | MS.gene38205:CDS |
TTACACGATATCACCTGCAG+AGG | 0.694581 | 5.3:+78710847 | MS.gene38205:CDS |
TCTCAAACCCTGGAACTCAG+AGG | 0.698392 | 5.3:-78710787 | None:intergenic |
TCTCTATCAAGCTAAGATCG+AGG | 0.707670 | 5.3:+78709866 | MS.gene38205:CDS |
TGGAGCAGTAGTTACCTGTG+TGG | 0.714398 | 5.3:+78711438 | MS.gene38205:CDS |
GTATGTTACCTGGTCAACTG+CGG | 0.716416 | 5.3:-78707815 | None:intergenic |
CCAACTACTAGTAACAGTCG+AGG | 0.735761 | 5.3:+78710506 | MS.gene38205:CDS |
AATCCGGTATATGGAGAACG+AGG | 0.748717 | 5.3:+78711660 | MS.gene38205:CDS |
AGCGTATTGAAGCTACTGTG+GGG | 0.753444 | 5.3:+78708615 | MS.gene38205:CDS |
CAAATGTAAGTACAACACCG+AGG | 0.806793 | 5.3:-78708550 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATTTCAATTACATAAA+AGG | - | chr5.3:78709553-78709572 | None:intergenic | 10.0% |
!!! | AATTTATCTAGTTTAATTAA+AGG | + | chr5.3:78707409-78707428 | MS.gene38205:CDS | 10.0% |
!!! | ATTAATTCACTTTTTTATTT+TGG | + | chr5.3:78707339-78707358 | MS.gene38205:intron | 10.0% |
!!! | TTTTAATATTACACATTTTA+AGG | + | chr5.3:78707939-78707958 | MS.gene38205:intron | 10.0% |
!! | AAAGTTTCAAAAGTTAAATT+TGG | + | chr5.3:78710464-78710483 | MS.gene38205:CDS | 15.0% |
!! | ATGTGATATTTCAATTATTT+GGG | - | chr5.3:78709165-78709184 | None:intergenic | 15.0% |
!! | TATGTGATATTTCAATTATT+TGG | - | chr5.3:78709166-78709185 | None:intergenic | 15.0% |
!!! | TATCAATAAATTTTCAAGTT+GGG | - | chr5.3:78711347-78711366 | None:intergenic | 15.0% |
!!! | TTTTACAATGTATTTATGTT+GGG | + | chr5.3:78706359-78706378 | MS.gene38205:intron | 15.0% |
!!! | TTTTTACAATGTATTTATGT+TGG | + | chr5.3:78706358-78706377 | MS.gene38205:intron | 15.0% |
!! | AAATATATATCCAAGAAGAA+AGG | - | chr5.3:78709278-78709297 | None:intergenic | 20.0% |
!! | AATTGAAGTGATAAAGTATA+AGG | + | chr5.3:78707967-78707986 | MS.gene38205:intron | 20.0% |
!! | TAAATGAAAAAATTGCTTGT+GGG | + | chr5.3:78711683-78711702 | MS.gene38205:CDS | 20.0% |
!! | TAATAGATAGAAGAAAAATC+CGG | + | chr5.3:78710817-78710836 | MS.gene38205:CDS | 20.0% |
!! | TAATCAAGTTATTAGACTAT+AGG | - | chr5.3:78707238-78707257 | None:intergenic | 20.0% |
!! | TAATCTCATTAAGTTATCAT+TGG | - | chr5.3:78708650-78708669 | None:intergenic | 20.0% |
!! | TATTATAATAACCTAATGTC+CGG | - | chr5.3:78710996-78711015 | None:intergenic | 20.0% |
!! | TTTAATTAAAGGATGTTGTT+TGG | + | chr5.3:78707420-78707439 | MS.gene38205:CDS | 20.0% |
!!! | AAAGTAAAGTATCTAAAGAT+AGG | - | chr5.3:78710000-78710019 | None:intergenic | 20.0% |
!!! | AAGTAAAGTATCTAAAGATA+GGG | - | chr5.3:78709999-78710018 | None:intergenic | 20.0% |
!!! | ATGTCATTATTTTCTCTTAT+TGG | + | chr5.3:78707841-78707860 | MS.gene38205:intron | 20.0% |
!!! | ATTAAATCAAAACTTGTTAG+TGG | + | chr5.3:78706287-78706306 | MS.gene38205:intron | 20.0% |
!!! | ATTTAAACTACAGAACTTTT+AGG | - | chr5.3:78706785-78706804 | None:intergenic | 20.0% |
!!! | ATTTAATTACTTGCTAAAAG+TGG | + | chr5.3:78706392-78706411 | MS.gene38205:intron | 20.0% |
!!! | ATTTTTTTGCATCGTTATAT+AGG | + | chr5.3:78708445-78708464 | MS.gene38205:intron | 20.0% |
!!! | GTATCAATAAATTTTCAAGT+TGG | - | chr5.3:78711348-78711367 | None:intergenic | 20.0% |
!!! | TATTTTTGAAAGGAAAAAAG+TGG | + | chr5.3:78706423-78706442 | MS.gene38205:intron | 20.0% |
!!! | TGTCATTATTTTCTCTTATT+GGG | + | chr5.3:78707842-78707861 | MS.gene38205:intron | 20.0% |
!!! | TTCATATTTAGAGTTATTCA+TGG | + | chr5.3:78707893-78707912 | MS.gene38205:intron | 20.0% |
!!! | TTTAATTACTTGCTAAAAGT+GGG | + | chr5.3:78706393-78706412 | MS.gene38205:intron | 20.0% |
!!! | TTTACTGGAAATTTTAGAAA+AGG | + | chr5.3:78710717-78710736 | MS.gene38205:CDS | 20.0% |
! | AAACAAGCATCAAAATTATG+TGG | - | chr5.3:78711499-78711518 | None:intergenic | 25.0% |
! | AAATGAAAAAATTGCTTGTG+GGG | + | chr5.3:78711684-78711703 | MS.gene38205:CDS | 25.0% |
! | AACTTGATTATGTAAAGTAG+TGG | + | chr5.3:78707248-78707267 | MS.gene38205:intron | 25.0% |
! | AATAAATCGAATAGCTAAAG+TGG | + | chr5.3:78709306-78709325 | MS.gene38205:CDS | 25.0% |
! | AATAGATAGAAGAAAAATCC+GGG | + | chr5.3:78710818-78710837 | MS.gene38205:CDS | 25.0% |
! | AATGAAGAATGCAAAAAATG+TGG | + | chr5.3:78711790-78711809 | MS.gene38205:CDS | 25.0% |
! | ATGAAGAATGCAAAAAATGT+GGG | + | chr5.3:78711791-78711810 | MS.gene38205:CDS | 25.0% |
! | ATGTAACTAATTAAGTGATG+TGG | - | chr5.3:78708729-78708748 | None:intergenic | 25.0% |
! | CAAATAATTACCAATCTTGT+TGG | + | chr5.3:78710161-78710180 | MS.gene38205:CDS | 25.0% |
! | CAACATTCTTAAAAGAAATG+AGG | - | chr5.3:78706888-78706907 | None:intergenic | 25.0% |
! | GTAAATGAAAAAATTGCTTG+TGG | + | chr5.3:78711682-78711701 | MS.gene38205:CDS | 25.0% |
! | TAAATTGATCTTGCAACATA+CGG | - | chr5.3:78707726-78707745 | None:intergenic | 25.0% |
! | TGAAAAGAATGTTATGATTC+TGG | - | chr5.3:78707128-78707147 | None:intergenic | 25.0% |
! | TGGACTTTAGTAGTTTAAAA+GGG | - | chr5.3:78708526-78708545 | None:intergenic | 25.0% |
! | TGTAAATTAGGATGATTCAT+AGG | - | chr5.3:78706836-78706855 | None:intergenic | 25.0% |
! | TTATAATAGATAATCCCATC+TGG | + | chr5.3:78709691-78709710 | MS.gene38205:intron | 25.0% |
! | TTGGACTTTAGTAGTTTAAA+AGG | - | chr5.3:78708527-78708546 | None:intergenic | 25.0% |
! | TTTCAGTTCATTCACAATAA+AGG | + | chr5.3:78710279-78710298 | MS.gene38205:intron | 25.0% |
!! | ATCTCAGGTTAGATATATTT+TGG | + | chr5.3:78709390-78709409 | MS.gene38205:intron | 25.0% |
!! | ATTGATACACAAACGAATTT+TGG | + | chr5.3:78711360-78711379 | MS.gene38205:CDS | 25.0% |
!! | CAAGATTGGTAATTATTTGT+CGG | - | chr5.3:78710160-78710179 | None:intergenic | 25.0% |
!! | CTGTTTTCAAATAATTTTCC+AGG | + | chr5.3:78709738-78709757 | MS.gene38205:intron | 25.0% |
!! | GTCATTATTTTCTCTTATTG+GGG | + | chr5.3:78707843-78707862 | MS.gene38205:intron | 25.0% |
!! | TCTCAGGTTAGATATATTTT+GGG | + | chr5.3:78709391-78709410 | MS.gene38205:intron | 25.0% |
!! | TTATGTTCTCTATACCTTTT+TGG | + | chr5.3:78710065-78710084 | MS.gene38205:intron | 25.0% |
!! | TTTTGTAACTCCAAATTCTT+CGG | - | chr5.3:78706580-78706599 | None:intergenic | 25.0% |
!!! | AGGTAATGTGTTAGTTTTTT+TGG | + | chr5.3:78710942-78710961 | MS.gene38205:intron | 25.0% |
!!! | ATTCTGGTTTACAAATTCAA+AGG | - | chr5.3:78707112-78707131 | None:intergenic | 25.0% |
!!! | CTAGTTATTTTTATGTCAGT+TGG | + | chr5.3:78707607-78707626 | MS.gene38205:CDS | 25.0% |
!!! | GGGAAAACTATATTTTTGAA+AGG | + | chr5.3:78706413-78706432 | MS.gene38205:intron | 25.0% |
!!! | GTACTGTTTTTCAATTGTAT+TGG | + | chr5.3:78706210-78706229 | MS.gene38205:intron | 25.0% |
!!! | TAATTTTGATGCTTGTTTCA+TGG | + | chr5.3:78711501-78711520 | MS.gene38205:CDS | 25.0% |
!!! | TATATTTCCATTTTTTTGCC+AGG | + | chr5.3:78709188-78709207 | MS.gene38205:intron | 25.0% |
!!! | TTTAAATTGTTGATTCTGCT+TGG | + | chr5.3:78706798-78706817 | MS.gene38205:intron | 25.0% |
!!! | TTTGTTATTACCTTTCTTCT+TGG | + | chr5.3:78709265-78709284 | MS.gene38205:CDS | 25.0% |
AAAATTCAGATCAGTTGTAC+CGG | + | chr5.3:78710974-78710993 | MS.gene38205:intron | 30.0% | |
AAAGAGAAACTAATCCTTTG+AGG | - | chr5.3:78709589-78709608 | None:intergenic | 30.0% | |
AAATTGATCTTGCAACATAC+GGG | - | chr5.3:78707725-78707744 | None:intergenic | 30.0% | |
AATCTTCAAACTTCTAGCAA+GGG | - | chr5.3:78707089-78707108 | None:intergenic | 30.0% | |
AATGTTACATATGCTTTCCA+AGG | - | chr5.3:78706685-78706704 | None:intergenic | 30.0% | |
AGAATGCTTAAACTTGAATC+AGG | + | chr5.3:78710374-78710393 | MS.gene38205:CDS | 30.0% | |
AGAATGTATTCCAGAAAACT+TGG | + | chr5.3:78708184-78708203 | MS.gene38205:CDS | 30.0% | |
AGATTCAGATGAAATAAGCT+TGG | + | chr5.3:78708362-78708381 | MS.gene38205:intron | 30.0% | |
ATCCTTGTCTATAAGAATCA+TGG | - | chr5.3:78711071-78711090 | None:intergenic | 30.0% | |
ATGTTACATATGCTTTCCAA+GGG | - | chr5.3:78706684-78706703 | None:intergenic | 30.0% | |
CATTAAATTGCTCACATATC+AGG | + | chr5.3:78708407-78708426 | MS.gene38205:intron | 30.0% | |
CTTCAAATGTTGTTAAGTAG+TGG | + | chr5.3:78706526-78706545 | MS.gene38205:CDS | 30.0% | |
GAACAAAGTCATCAAGAATT+GGG | - | chr5.3:78706639-78706658 | None:intergenic | 30.0% | |
GACATTGTAAAAATACTCCA+CGG | - | chr5.3:78708760-78708779 | None:intergenic | 30.0% | |
GAGTGGTAAAGATCTTATAT+CGG | + | chr5.3:78709830-78709849 | MS.gene38205:CDS | 30.0% | |
GGACTTTAGTAGTTTAAAAG+GGG | - | chr5.3:78708525-78708544 | None:intergenic | 30.0% | |
GGTCAATCACTATGTAAATT+AGG | - | chr5.3:78706848-78706867 | None:intergenic | 30.0% | |
GTTTGACTGCAGAAAATATT+TGG | + | chr5.3:78708011-78708030 | MS.gene38205:intron | 30.0% | |
TCTTATAGACAAGGATTCTT+GGG | + | chr5.3:78711075-78711094 | MS.gene38205:CDS | 30.0% | |
TGAACAAAGTCATCAAGAAT+TGG | - | chr5.3:78706640-78706659 | None:intergenic | 30.0% | |
TGGTTGGACAATTAAGAAAA+TGG | + | chr5.3:78708136-78708155 | MS.gene38205:CDS | 30.0% | |
TTACAAATGCATGTGATACA+CGG | - | chr5.3:78708814-78708833 | None:intergenic | 30.0% | |
TTACCTAAAACACCATTCAT+TGG | - | chr5.3:78709651-78709670 | None:intergenic | 30.0% | |
TTATACGCAATCAAGAAACA+AGG | + | chr5.3:78711115-78711134 | MS.gene38205:CDS | 30.0% | |
TTCTTATAGACAAGGATTCT+TGG | + | chr5.3:78711074-78711093 | MS.gene38205:CDS | 30.0% | |
! | CTCAGGTTAGATATATTTTG+GGG | + | chr5.3:78709392-78709411 | MS.gene38205:intron | 30.0% |
! | GAAGAATTTGGAGTTACAAA+AGG | + | chr5.3:78706579-78706598 | MS.gene38205:CDS | 30.0% |
! | GTGTGTTGTTATTCATGTAT+TGG | + | chr5.3:78708892-78708911 | MS.gene38205:intron | 30.0% |
! | GTTGTTATTCATGTATTGGA+AGG | + | chr5.3:78708896-78708915 | MS.gene38205:intron | 30.0% |
! | TGTCCAATTGTATTGATGAA+AGG | + | chr5.3:78706500-78706519 | MS.gene38205:CDS | 30.0% |
! | TGTTTGGTAACATTTCTTAC+TGG | + | chr5.3:78711722-78711741 | MS.gene38205:CDS | 30.0% |
! | TTGGAAAGCATATGTAACAT+TGG | + | chr5.3:78706684-78706703 | MS.gene38205:CDS | 30.0% |
! | TTTTTACAATGTCGGTGTAT+TGG | + | chr5.3:78708767-78708786 | MS.gene38205:intron | 30.0% |
! | TTTTTGCATCGTTATATAGG+AGG | + | chr5.3:78708448-78708467 | MS.gene38205:intron | 30.0% |
!! | GAAAAAGTACTTCCAATTTC+AGG | - | chr5.3:78710696-78710715 | None:intergenic | 30.0% |
!! | GTGGAGTATTTTTACAATGT+CGG | + | chr5.3:78708759-78708778 | MS.gene38205:intron | 30.0% |
!!! | CATAAGATGCACTTTGTTTT+TGG | + | chr5.3:78706188-78706207 | MS.gene38205:intron | 30.0% |
!!! | GGAAGTACTTTTTCATTTAC+TGG | + | chr5.3:78710702-78710721 | MS.gene38205:CDS | 30.0% |
!!! | TATTTTGGTTTTGCAATCAC+AGG | + | chr5.3:78707354-78707373 | MS.gene38205:intron | 30.0% |
AAAACAAGCAGATTGAAGAC+TGG | - | chr5.3:78710898-78710917 | None:intergenic | 35.0% | |
AAAAGGAGAAACAGAATCTG+TGG | + | chr5.3:78710734-78710753 | MS.gene38205:CDS | 35.0% | |
AAACTTGAATCAGGACATGT+CGG | + | chr5.3:78710383-78710402 | MS.gene38205:CDS | 35.0% | |
AAATGTCTAGTTGACCTCAT+GGG | + | chr5.3:78710645-78710664 | MS.gene38205:CDS | 35.0% | |
AAGCGAATTTCCAACAAGAT+TGG | - | chr5.3:78710174-78710193 | None:intergenic | 35.0% | |
AAGGAAGAATCAAAAGCAGA+AGG | + | chr5.3:78707492-78707511 | MS.gene38205:CDS | 35.0% | |
AATCCATCTGATTGTCATCA+AGG | - | chr5.3:78709791-78709810 | None:intergenic | 35.0% | |
AATCCTAACATTCTTGCCAT+CGG | - | chr5.3:78709451-78709470 | None:intergenic | 35.0% | |
AGAACATGCAATACATTGAG+TGG | + | chr5.3:78710408-78710427 | MS.gene38205:CDS | 35.0% | |
AGAATGCAAAAAATGTGGGA+TGG | + | chr5.3:78711795-78711814 | MS.gene38205:CDS | 35.0% | |
AGTCGTATTTGCTCAAGAAA+CGG | + | chr5.3:78708238-78708257 | MS.gene38205:CDS | 35.0% | |
ATCAAAACACTTTGCCAAAG+AGG | - | chr5.3:78711265-78711284 | None:intergenic | 35.0% | |
ATCAAGAAACAAGGACAGAA+TGG | + | chr5.3:78711124-78711143 | MS.gene38205:CDS | 35.0% | |
ATGACATTGAGTATGTTACC+TGG | - | chr5.3:78707828-78707847 | None:intergenic | 35.0% | |
ATGTACTAATGAAGCCTCTT+TGG | + | chr5.3:78711248-78711267 | MS.gene38205:CDS | 35.0% | |
ATTAATTACCCGTCCATTTC+TGG | - | chr5.3:78711538-78711557 | None:intergenic | 35.0% | |
ATTGGATGTAATGTGTGTGT+TGG | + | chr5.3:78708785-78708804 | MS.gene38205:intron | 35.0% | |
CAAAATGCATCCTATCAGAA+TGG | - | chr5.3:78708106-78708125 | None:intergenic | 35.0% | |
CAAGCATCAAAATTATGTGG+TGG | - | chr5.3:78711496-78711515 | None:intergenic | 35.0% | |
CATATTTACACCTTTCATGC+AGG | + | chr5.3:78710566-78710585 | MS.gene38205:CDS | 35.0% | |
CCTCCTTTCATCAATACAAT+TGG | - | chr5.3:78706506-78706525 | None:intergenic | 35.0% | |
CTACTAAAGTCCAATTACCT+CGG | + | chr5.3:78708533-78708552 | MS.gene38205:CDS | 35.0% | |
GAATCTTCAAACTTCTAGCA+AGG | - | chr5.3:78707090-78707109 | None:intergenic | 35.0% | |
GACATTGTAACGTTGTAACA+AGG | - | chr5.3:78706113-78706132 | None:intergenic | 35.0% | |
GAGCAAAACGTTAACCAAAT+AGG | - | chr5.3:78706725-78706744 | None:intergenic | 35.0% | |
GAGGCATATAAGATGTCTAA+AGG | - | chr5.3:78706869-78706888 | None:intergenic | 35.0% | |
GGTGCATATTCATCTTGAAT+GGG | - | chr5.3:78708218-78708237 | None:intergenic | 35.0% | |
GTAAAAACTCTACCTTTCCA+CGG | - | chr5.3:78706747-78706766 | None:intergenic | 35.0% | |
GTTAATGTGTCCGAAGAATT+TGG | + | chr5.3:78706567-78706586 | MS.gene38205:CDS | 35.0% | |
TAAATAACCATGCAGAACCA+AGG | - | chr5.3:78707636-78707655 | None:intergenic | 35.0% | |
TAAATGTCTAGTTGACCTCA+TGG | + | chr5.3:78710644-78710663 | MS.gene38205:CDS | 35.0% | |
TAAGCCAGTATCAAGAACAT+CGG | - | chr5.3:78709052-78709071 | None:intergenic | 35.0% | |
TAATTCTCTCTTGACCTCAA+AGG | + | chr5.3:78709572-78709591 | MS.gene38205:intron | 35.0% | |
TACAACGTTACAATGTCAGT+AGG | + | chr5.3:78706116-78706135 | MS.gene38205:CDS | 35.0% | |
TAGAGTTGCTCTTCTTCAAA+TGG | - | chr5.3:78711838-78711857 | None:intergenic | 35.0% | |
TATACACTGTCACTGTAAAG+AGG | - | chr5.3:78708839-78708858 | None:intergenic | 35.0% | |
TCAAAAGCAGAAGGTAGTTA+AGG | + | chr5.3:78707501-78707520 | MS.gene38205:CDS | 35.0% | |
TCTGAAAAGTCCGATGAAAA+AGG | + | chr5.3:78709960-78709979 | MS.gene38205:CDS | 35.0% | |
TCTGATCCTATTACGATGTA+TGG | + | chr5.3:78709024-78709043 | MS.gene38205:CDS | 35.0% | |
TCTTGTTGGAAATTCGCTTA+AGG | + | chr5.3:78710175-78710194 | MS.gene38205:CDS | 35.0% | |
TGAAAGTTCTCCATTCTGAT+AGG | + | chr5.3:78708093-78708112 | MS.gene38205:CDS | 35.0% | |
TGAAGAAGAGCAACTCTATA+CGG | + | chr5.3:78711840-78711859 | MS.gene38205:CDS | 35.0% | |
TGACGACTGTCAATAACATA+AGG | - | chr5.3:78708329-78708348 | None:intergenic | 35.0% | |
TGAGCTGAAGTAAAATGAGA+GGG | + | chr5.3:78706320-78706339 | MS.gene38205:intron | 35.0% | |
TGATTCTGCTTGGAATTTGT+TGG | + | chr5.3:78706808-78706827 | MS.gene38205:intron | 35.0% | |
TGCAACAAAATTGTTTCCGA+TGG | + | chr5.3:78709432-78709451 | MS.gene38205:intron | 35.0% | |
TGGAGAATATACAGAGAGTT+CGG | + | chr5.3:78708031-78708050 | MS.gene38205:CDS | 35.0% | |
TGGTGCATATTCATCTTGAA+TGG | - | chr5.3:78708219-78708238 | None:intergenic | 35.0% | |
TTGAGCTGAAGTAAAATGAG+AGG | + | chr5.3:78706319-78706338 | MS.gene38205:intron | 35.0% | |
TTGTAAAAATACTCCACGGT+AGG | - | chr5.3:78708756-78708775 | None:intergenic | 35.0% | |
TTTATGTCAGTTGGAATCCT+TGG | + | chr5.3:78707616-78707635 | MS.gene38205:CDS | 35.0% | |
TTTCTGATACTTGCAACTCA+AGG | + | chr5.3:78710922-78710941 | MS.gene38205:CDS | 35.0% | |
TTTGTAAGTGAGCCTGAAAT+TGG | + | chr5.3:78710681-78710700 | MS.gene38205:CDS | 35.0% | |
TTTGTACCCTCCAATTATCT+CGG | + | chr5.3:78710022-78710041 | MS.gene38205:intron | 35.0% | |
! | ACTCCAATGAATGGTGTTTT+AGG | + | chr5.3:78709645-78709664 | MS.gene38205:CDS | 35.0% |
! | ACTTCATCTAGAATTGCATG+TGG | - | chr5.3:78709927-78709946 | None:intergenic | 35.0% |
! | CCAATTGTATTGATGAAAGG+AGG | + | chr5.3:78706503-78706522 | MS.gene38205:CDS | 35.0% |
! | CTTTCCAAAGATTTTTCTCC+TGG | + | chr5.3:78711168-78711187 | MS.gene38205:CDS | 35.0% |
! | GATACACAAACGAATTTTGG+TGG | + | chr5.3:78711363-78711382 | MS.gene38205:CDS | 35.0% |
! | GCATGAAAGGTGTAAATATG+CGG | - | chr5.3:78710566-78710585 | None:intergenic | 35.0% |
! | TAGGAAACAGCTTCATGTTT+TGG | + | chr5.3:78706135-78706154 | MS.gene38205:CDS | 35.0% |
! | TCTTACATGTTGCAGTTTTG+AGG | + | chr5.3:78711627-78711646 | MS.gene38205:intron | 35.0% |
! | TCTTATATCGGTTATAAGCG+AGG | + | chr5.3:78709842-78709861 | MS.gene38205:CDS | 35.0% |
! | TGAGAATATTTTGCGAGCAA+GGG | + | chr5.3:78708475-78708494 | MS.gene38205:CDS | 35.0% |
! | TGGTTGGTATACTGTAAAAC+AGG | - | chr5.3:78706984-78707003 | None:intergenic | 35.0% |
! | TTCTAGCAAGGGCATAAAAA+TGG | - | chr5.3:78707078-78707097 | None:intergenic | 35.0% |
!! | ATTATTTGTCGGAAGCGTTT+AGG | - | chr5.3:78710149-78710168 | None:intergenic | 35.0% |
!! | CACCTCAATTCCTTTTTCAT+CGG | - | chr5.3:78709973-78709992 | None:intergenic | 35.0% |
!! | TCATGTATTGGAAGGTATCT+GGG | + | chr5.3:78708904-78708923 | MS.gene38205:intron | 35.0% |
!! | TGTTTTTGTCTCGATTCATC+TGG | + | chr5.3:78710305-78710324 | MS.gene38205:CDS | 35.0% |
!! | TTCATGTATTGGAAGGTATC+TGG | + | chr5.3:78708903-78708922 | MS.gene38205:intron | 35.0% |
!! | TTGGTTCTGCATGGTTATTT+AGG | + | chr5.3:78707635-78707654 | MS.gene38205:CDS | 35.0% |
!!! | TGTCTGGCTTTTGTTTACTA+AGG | + | chr5.3:78707473-78707492 | MS.gene38205:CDS | 35.0% |
AACAAAAGCCAGACAACTTG+TGG | - | chr5.3:78707468-78707487 | None:intergenic | 40.0% | |
AAGTACAACACCGAGGTAAT+TGG | - | chr5.3:78708546-78708565 | None:intergenic | 40.0% | |
AATTGCTTGTGGGGAAGAAT+TGG | + | chr5.3:78711693-78711712 | MS.gene38205:CDS | 40.0% | |
ACAAAAGCCAGACAACTTGT+GGG | - | chr5.3:78707467-78707486 | None:intergenic | 40.0% | |
ACCAGTAGTAATGCATCGTA+TGG | + | chr5.3:78707039-78707058 | MS.gene38205:intron | 40.0% | |
AGACTGAATGCCGAGATAAT+TGG | - | chr5.3:78710035-78710054 | None:intergenic | 40.0% | |
AGCTTGGATTATCATTCCCT+TGG | + | chr5.3:78706665-78706684 | MS.gene38205:CDS | 40.0% | |
AGGAAACAGATGGAAAAGCT+GGG | + | chr5.3:78710440-78710459 | MS.gene38205:CDS | 40.0% | |
AGGTATGCTGCAAATGTTGA+TGG | + | chr5.3:78709758-78709777 | MS.gene38205:intron | 40.0% | |
ATCAACATTTGCAGCATACC+TGG | - | chr5.3:78709759-78709778 | None:intergenic | 40.0% | |
ATGGCAGAAGAATAACCCTT+TGG | + | chr5.3:78710764-78710783 | MS.gene38205:CDS | 40.0% | |
ATTTCCTTGGACAGCATTCT+GGG | + | chr5.3:78709228-78709247 | MS.gene38205:CDS | 40.0% | |
CAAATGTAAGTACAACACCG+AGG | - | chr5.3:78708553-78708572 | None:intergenic | 40.0% | |
CAAGTACCTGAAGTTGTCAT+CGG | + | chr5.3:78710119-78710138 | MS.gene38205:CDS | 40.0% | |
CAGAATCTGTGGATGAGAAA+TGG | + | chr5.3:78710745-78710764 | MS.gene38205:CDS | 40.0% | |
CCAACAAGTGTTTACCAGAT+GGG | - | chr5.3:78709708-78709727 | None:intergenic | 40.0% | |
CCAACTGTACTCAACCAAAA+AGG | - | chr5.3:78710082-78710101 | None:intergenic | 40.0% | |
CTATGATGTTCCATCACTTG+TGG | + | chr5.3:78708933-78708952 | MS.gene38205:CDS | 40.0% | |
CTTGTGTCTACATTTCACCA+TGG | + | chr5.3:78707781-78707800 | MS.gene38205:CDS | 40.0% | |
GAAAATGGAAACTGAGAACG+AGG | + | chr5.3:78708151-78708170 | MS.gene38205:CDS | 40.0% | |
GAAGAATTGGCAGAGATGTT+TGG | + | chr5.3:78711706-78711725 | MS.gene38205:CDS | 40.0% | |
GACTTTGTTCACATGAAGCT+TGG | + | chr5.3:78706649-78706668 | MS.gene38205:CDS | 40.0% | |
GATTTCCTGTAGGAAACAGA+TGG | + | chr5.3:78710430-78710449 | MS.gene38205:CDS | 40.0% | |
GCTTGAACCTGGCAAAAAAA+TGG | - | chr5.3:78709198-78709217 | None:intergenic | 40.0% | |
GGCCATGATTCTTATAGACA+AGG | + | chr5.3:78711066-78711085 | MS.gene38205:CDS | 40.0% | |
GGGACAGTATAATGCCAATA+AGG | - | chr5.3:78707447-78707466 | None:intergenic | 40.0% | |
GGTAATAACAAATACCCCCA+AGG | - | chr5.3:78709257-78709276 | None:intergenic | 40.0% | |
GTCATACACATTGACAGCAA+TGG | - | chr5.3:78708992-78709011 | None:intergenic | 40.0% | |
GTCCGATGAAAAAGGAATTG+AGG | + | chr5.3:78709968-78709987 | MS.gene38205:CDS | 40.0% | |
GTGAACAGAAAAGTTGCAGA+AGG | + | chr5.3:78711400-78711419 | MS.gene38205:CDS | 40.0% | |
GTTTCTTGAGCAAATACGAC+TGG | - | chr5.3:78708239-78708258 | None:intergenic | 40.0% | |
TAAGCAACACCACTAGTAAG+TGG | - | chr5.3:78708068-78708087 | None:intergenic | 40.0% | |
TAGGAAACAGATGGAAAAGC+TGG | + | chr5.3:78710439-78710458 | MS.gene38205:CDS | 40.0% | |
TAGTTACATTCATCCTACCG+TGG | + | chr5.3:78708740-78708759 | MS.gene38205:intron | 40.0% | |
TATCCATCGACATGATGTCA+GGG | + | chr5.3:78708273-78708292 | MS.gene38205:CDS | 40.0% | |
TCAGCTGTCATAGCTAGTAT+TGG | - | chr5.3:78711754-78711773 | None:intergenic | 40.0% | |
TCCATACGATGCATTACTAC+TGG | - | chr5.3:78707043-78707062 | None:intergenic | 40.0% | |
TCGGTACCATACATCGTAAT+AGG | - | chr5.3:78709033-78709052 | None:intergenic | 40.0% | |
TCTCTATCAAGCTAAGATCG+AGG | + | chr5.3:78709866-78709885 | MS.gene38205:CDS | 40.0% | |
TGAATGCCGAGATAATTGGA+GGG | - | chr5.3:78710031-78710050 | None:intergenic | 40.0% | |
TTACCTCGTTCTCCATATAC+CGG | - | chr5.3:78711666-78711685 | None:intergenic | 40.0% | |
TTACTAATGCTCTCAAACCC+TGG | - | chr5.3:78710800-78710819 | None:intergenic | 40.0% | |
TTCTTCGGACACATTAACTG+TGG | - | chr5.3:78706565-78706584 | None:intergenic | 40.0% | |
TTTCCGATGGCAAGAATGTT+AGG | + | chr5.3:78709445-78709464 | MS.gene38205:intron | 40.0% | |
TTTGCAATCACAGGTGATGA+GGG | + | chr5.3:78707363-78707382 | MS.gene38205:intron | 40.0% | |
! | ACATTGAGTGGATTTCCTGT+AGG | + | chr5.3:78710420-78710439 | MS.gene38205:CDS | 40.0% |
! | ACGTAAGCGGTCTAGATTTT+GGG | + | chr5.3:78709076-78709095 | MS.gene38205:CDS | 40.0% |
! | ACTTTGAGTTTGTCGAAGCT+CGG | + | chr5.3:78707005-78707024 | MS.gene38205:intron | 40.0% |
! | CACAAGTGATGGAACATCAT+AGG | - | chr5.3:78708935-78708954 | None:intergenic | 40.0% |
! | CTCTGCACTTTTGTCCTATT+TGG | + | chr5.3:78706708-78706727 | MS.gene38205:CDS | 40.0% |
! | CTTTTCCATCTGTTTCCTAC+AGG | - | chr5.3:78710438-78710457 | None:intergenic | 40.0% |
! | GGATGTTGTTTGGTCCTTAT+TGG | + | chr5.3:78707430-78707449 | MS.gene38205:CDS | 40.0% |
! | GTGAGAATATTTTGCGAGCA+AGG | + | chr5.3:78708474-78708493 | MS.gene38205:CDS | 40.0% |
! | TGACCTTGATGACAATCAGA+TGG | + | chr5.3:78709785-78709804 | MS.gene38205:CDS | 40.0% |
! | TGCATCTCATGTTTTCGTAG+TGG | - | chr5.3:78709105-78709124 | None:intergenic | 40.0% |
! | TTGTTTTCTCCCAGTTCCAA+GGG | - | chr5.3:78711305-78711324 | None:intergenic | 40.0% |
! | TTTAGCTCCTTCTGCTCATT+GGG | - | chr5.3:78711208-78711227 | None:intergenic | 40.0% |
! | TTTTGCAATCACAGGTGATG+AGG | + | chr5.3:78707362-78707381 | MS.gene38205:intron | 40.0% |
!! | AAATATGCGGCTTTGAGCAT+CGG | - | chr5.3:78710553-78710572 | None:intergenic | 40.0% |
!! | ATCATCTCTTTTAGCTGCTG+CGG | + | chr5.3:78710221-78710240 | MS.gene38205:intron | 40.0% |
!! | ATGCATTTTGAGAAGCAGCA+TGG | + | chr5.3:78708116-78708135 | MS.gene38205:CDS | 40.0% |
!! | ATTTTGAGAAGCAGCATGGT+TGG | + | chr5.3:78708120-78708139 | MS.gene38205:CDS | 40.0% |
!! | CAATGTTGAATCCGCTTTTG+TGG | - | chr5.3:78707541-78707560 | None:intergenic | 40.0% |
!! | GAAGGTGTTCTGCGAAAATA+TGG | + | chr5.3:78711418-78711437 | MS.gene38205:CDS | 40.0% |
!! | TTTGTTTTCTCCCAGTTCCA+AGG | - | chr5.3:78711306-78711325 | None:intergenic | 40.0% |
!!! | CCTTTTTGGTTGAGTACAGT+TGG | + | chr5.3:78710079-78710098 | MS.gene38205:intron | 40.0% |
AATATGAACTAGCAGACCCG+AGG | - | chr5.3:78707874-78707893 | None:intergenic | 45.0% | |
AATCCGGTATATGGAGAACG+AGG | + | chr5.3:78711660-78711679 | MS.gene38205:CDS | 45.0% | |
AATGCTGTCCAAGGAAATGG+AGG | - | chr5.3:78709226-78709245 | None:intergenic | 45.0% | |
ACACAAGAATAGCGAGAGCA+TGG | - | chr5.3:78707768-78707787 | None:intergenic | 45.0% | |
ACAGAGAATCCCTTGGAACT+GGG | + | chr5.3:78711293-78711312 | MS.gene38205:CDS | 45.0% | |
ACAGCGTATTGAAGCTACTG+TGG | + | chr5.3:78708613-78708632 | MS.gene38205:CDS | 45.0% | |
ACATACGGTGGAACTGGAAT+AGG | + | chr5.3:78710609-78710628 | MS.gene38205:CDS | 45.0% | |
ACCAGTAGCCTTTGAATGAC+CGG | - | chr5.3:78707569-78707588 | None:intergenic | 45.0% | |
AGAAGCTTGTCCACAAGTGA+TGG | - | chr5.3:78708946-78708965 | None:intergenic | 45.0% | |
AGACAAGGATTCTTGGGACA+AGG | + | chr5.3:78711081-78711100 | MS.gene38205:CDS | 45.0% | |
AGCATATGCCTCCATTTCCT+TGG | + | chr5.3:78709215-78709234 | MS.gene38205:CDS | 45.0% | |
AGCGTATTGAAGCTACTGTG+GGG | + | chr5.3:78708615-78708634 | MS.gene38205:CDS | 45.0% | |
AGTTCCACATCGCGAACATA+CGG | + | chr5.3:78710594-78710613 | MS.gene38205:CDS | 45.0% | |
ATACTGTCCCACAAGTTGTC+TGG | + | chr5.3:78707457-78707476 | MS.gene38205:CDS | 45.0% | |
ATCCAATTTCTCCTCCCATG+AGG | - | chr5.3:78710662-78710681 | None:intergenic | 45.0% | |
CAGAAGGAGCTAAAGTCAGT+TGG | + | chr5.3:78711214-78711233 | MS.gene38205:CDS | 45.0% | |
CAGAATGCTGTCCAAGGAAA+TGG | - | chr5.3:78709229-78709248 | None:intergenic | 45.0% | |
CAGCGTATTGAAGCTACTGT+GGG | + | chr5.3:78708614-78708633 | MS.gene38205:CDS | 45.0% | |
CATTCAACTCCACACCAATG+TGG | - | chr5.3:78706926-78706945 | None:intergenic | 45.0% | |
CATTTCCTTGGACAGCATTC+TGG | + | chr5.3:78709227-78709246 | MS.gene38205:CDS | 45.0% | |
CCAACTACTAGTAACAGTCG+AGG | + | chr5.3:78710506-78710525 | MS.gene38205:CDS | 45.0% | |
CCCATCTGGTAAACACTTGT+TGG | + | chr5.3:78709705-78709724 | MS.gene38205:intron | 45.0% | |
CCTCGACTGTTACTAGTAGT+TGG | - | chr5.3:78710509-78710528 | None:intergenic | 45.0% | |
CGACAAACTCAAAGTGTGGT+TGG | - | chr5.3:78707000-78707019 | None:intergenic | 45.0% | |
CGACAGTTTCACATGAGATC+AGG | + | chr5.3:78709622-78709641 | MS.gene38205:CDS | 45.0% | |
CGATGACAACTTCAGGTACT+TGG | - | chr5.3:78710121-78710140 | None:intergenic | 45.0% | |
CGGATTCAACATTGTATGCC+CGG | + | chr5.3:78707547-78707566 | MS.gene38205:CDS | 45.0% | |
CTCCAAATGCCAGAAATGGA+CGG | + | chr5.3:78711526-78711545 | MS.gene38205:CDS | 45.0% | |
CTGAATGCCGAGATAATTGG+AGG | - | chr5.3:78710032-78710051 | None:intergenic | 45.0% | |
CTGATCTGATCCTGAGAACA+AGG | - | chr5.3:78706164-78706183 | None:intergenic | 45.0% | |
CTTGTTCTCAGGATCAGATC+AGG | + | chr5.3:78706162-78706181 | MS.gene38205:CDS | 45.0% | |
GAAAACATGAGATGCACTGC+AGG | + | chr5.3:78709109-78709128 | MS.gene38205:CDS | 45.0% | |
GAACTATCAGCCTGCATGAA+AGG | - | chr5.3:78710579-78710598 | None:intergenic | 45.0% | |
GACTAGGCTAATCCGGTATA+TGG | + | chr5.3:78711651-78711670 | MS.gene38205:CDS | 45.0% | |
GAGATCAGGACTCCAATGAA+TGG | + | chr5.3:78709636-78709655 | MS.gene38205:CDS | 45.0% | |
GATCAGTTGTACCGGACATT+AGG | + | chr5.3:78710982-78711001 | MS.gene38205:intron | 45.0% | |
GCCAACAAGTGTTTACCAGA+TGG | - | chr5.3:78709709-78709728 | None:intergenic | 45.0% | |
GCTTCGACAAACTCAAAGTG+TGG | - | chr5.3:78707004-78707023 | None:intergenic | 45.0% | |
GGATCTCCAAATGCCAGAAA+TGG | + | chr5.3:78711522-78711541 | MS.gene38205:CDS | 45.0% | |
GTAGCTTCAATACGCTGTTC+AGG | - | chr5.3:78708611-78708630 | None:intergenic | 45.0% | |
GTATCCATCGACATGATGTC+AGG | + | chr5.3:78708272-78708291 | MS.gene38205:CDS | 45.0% | |
GTATGTTACCTGGTCAACTG+CGG | - | chr5.3:78707818-78707837 | None:intergenic | 45.0% | |
GTCATTCAAAGGCTACTGGT+TGG | + | chr5.3:78707569-78707588 | MS.gene38205:CDS | 45.0% | |
GTGATGTGGCAACACATCAT+AGG | - | chr5.3:78708715-78708734 | None:intergenic | 45.0% | |
GTGCATGTTTGCTTCCACAT+TGG | + | chr5.3:78706909-78706928 | MS.gene38205:intron | 45.0% | |
GTGGCCAGGAGAAAAATCTT+TGG | - | chr5.3:78711175-78711194 | None:intergenic | 45.0% | |
GTGTGATAGCAAGCTAAGAG+AGG | - | chr5.3:78708307-78708326 | None:intergenic | 45.0% | |
TACAGAGAATCCCTTGGAAC+TGG | + | chr5.3:78711292-78711311 | MS.gene38205:CDS | 45.0% | |
TAGAAGAAAAATCCGGGCTG+AGG | + | chr5.3:78710824-78710843 | MS.gene38205:CDS | 45.0% | |
TATCAAGCTAAGATCGAGGC+AGG | + | chr5.3:78709870-78709889 | MS.gene38205:CDS | 45.0% | |
TATTCATCTTGAATGGGCGC+TGG | - | chr5.3:78708212-78708231 | None:intergenic | 45.0% | |
TCCAAATGCCAGAAATGGAC+GGG | + | chr5.3:78711527-78711546 | MS.gene38205:CDS | 45.0% | |
TGCAGATGTCGCAAAATCTC+AGG | + | chr5.3:78709375-78709394 | MS.gene38205:CDS | 45.0% | |
TGTTTGCTTCCACATTGGTG+TGG | + | chr5.3:78706914-78706933 | MS.gene38205:intron | 45.0% | |
TTACACGATATCACCTGCAG+AGG | + | chr5.3:78710847-78710866 | MS.gene38205:CDS | 45.0% | |
TTAGCTCCTTCTGCTCATTG+GGG | - | chr5.3:78711207-78711226 | None:intergenic | 45.0% | |
TTGAGGTGACTAGGCTAATC+CGG | + | chr5.3:78711644-78711663 | MS.gene38205:CDS | 45.0% | |
TTGGTGTGGAGTTGAATGTG+CGG | + | chr5.3:78706928-78706947 | MS.gene38205:intron | 45.0% | |
TTGTATGCCCGGTCATTCAA+AGG | + | chr5.3:78707558-78707577 | MS.gene38205:CDS | 45.0% | |
TTTCAGTATGTCGACGCAGT+TGG | + | chr5.3:78711045-78711064 | MS.gene38205:intron | 45.0% | |
TTTGAGAGGCCACTTACTAG+TGG | + | chr5.3:78708056-78708075 | MS.gene38205:CDS | 45.0% | |
! | ACTGGCTTACTACACGTAAG+CGG | + | chr5.3:78709063-78709082 | MS.gene38205:CDS | 45.0% |
! | ATTCAAAGGCTACTGGTTGG+CGG | + | chr5.3:78707572-78707591 | MS.gene38205:CDS | 45.0% |
! | CACGTAAGCGGTCTAGATTT+TGG | + | chr5.3:78709075-78709094 | MS.gene38205:CDS | 45.0% |
! | CGTAAGCGGTCTAGATTTTG+GGG | + | chr5.3:78709077-78709096 | MS.gene38205:CDS | 45.0% |
! | CTTTAGCTCCTTCTGCTCAT+TGG | - | chr5.3:78711209-78711228 | None:intergenic | 45.0% |
! | GCGTCGACATACTGAAAGAA+TGG | - | chr5.3:78711042-78711061 | None:intergenic | 45.0% |
! | TAACGTTTTGCTCCGTGGAA+AGG | + | chr5.3:78706732-78706751 | MS.gene38205:CDS | 45.0% |
! | TTGGTTAACGTTTTGCTCCG+TGG | + | chr5.3:78706727-78706746 | MS.gene38205:CDS | 45.0% |
!! | CTCTTATTGGGGTATTGCCT+CGG | + | chr5.3:78707854-78707873 | MS.gene38205:intron | 45.0% |
!! | GGTACCGATGTTCTTGATAC+TGG | + | chr5.3:78709045-78709064 | MS.gene38205:CDS | 45.0% |
!! | TCTTATTGGGGTATTGCCTC+GGG | + | chr5.3:78707855-78707874 | MS.gene38205:intron | 45.0% |
!! | TTGGAATCCTTGGTTCTGCA+TGG | + | chr5.3:78707626-78707645 | MS.gene38205:CDS | 45.0% |
!!! | GTTGCAGTTTTGAGGTGACT+AGG | + | chr5.3:78711635-78711654 | MS.gene38205:intron | 45.0% |
!!! | GTTTTGGCTTCCTTGTTCTC+AGG | + | chr5.3:78706151-78706170 | MS.gene38205:CDS | 45.0% |
!!! | TTTGATTTAATTAAAAATAA+TGG | - | chr5.3:78706278-78706297 | None:intergenic | 5.0% |
ACAGCATTCTGGGCATCCTT+GGG | + | chr5.3:78709238-78709257 | MS.gene38205:CDS | 50.0% | |
ACAGTCGAGGACACTGGTAT+AGG | + | chr5.3:78710519-78710538 | MS.gene38205:CDS | 50.0% | |
ACCACTCGTGTGAGCAGTTT+GGG | - | chr5.3:78709817-78709836 | None:intergenic | 50.0% | |
ACGATATCACCTGCAGAGGT+TGG | + | chr5.3:78710851-78710870 | MS.gene38205:CDS | 50.0% | |
AGAGCAACTCTATACGGCAG+TGG | + | chr5.3:78711846-78711865 | MS.gene38205:CDS | 50.0% | |
AGCAGTAGTTACCTGTGTGG+AGG | + | chr5.3:78711441-78711460 | MS.gene38205:CDS | 50.0% | |
ATCCACCTGCTCCACAAAAG+CGG | + | chr5.3:78707527-78707546 | MS.gene38205:CDS | 50.0% | |
CAAGGACAGAATGGCGTCAA+AGG | + | chr5.3:78711133-78711152 | MS.gene38205:CDS | 50.0% | |
CAGAGAGTTCGGCATTTGAG+AGG | + | chr5.3:78708042-78708061 | MS.gene38205:CDS | 50.0% | |
CATCGACATGATGTCAGGGA+AGG | + | chr5.3:78708277-78708296 | MS.gene38205:CDS | 50.0% | |
CCAGTAGCCTTTGAATGACC+GGG | - | chr5.3:78707568-78707587 | None:intergenic | 50.0% | |
CGATATCACCTGCAGAGGTT+GGG | + | chr5.3:78710852-78710871 | MS.gene38205:CDS | 50.0% | |
CGCTACTACAGAGAATCCCT+TGG | + | chr5.3:78711286-78711305 | MS.gene38205:CDS | 50.0% | |
CTAGTAACAGTCGAGGACAC+TGG | + | chr5.3:78710513-78710532 | MS.gene38205:CDS | 50.0% | |
CTGCGGAAGGATGTTTACCA+TGG | - | chr5.3:78707801-78707820 | None:intergenic | 50.0% | |
CTTCCCTGACATCATGTCGA+TGG | - | chr5.3:78708279-78708298 | None:intergenic | 50.0% | |
GACCTCATGGGAGGAGAAAT+TGG | + | chr5.3:78710657-78710676 | MS.gene38205:CDS | 50.0% | |
GATATCGTGTAACCTCAGCC+CGG | - | chr5.3:78710839-78710858 | None:intergenic | 50.0% | |
GCAGTAGTTACCTGTGTGGA+GGG | + | chr5.3:78711442-78711461 | MS.gene38205:CDS | 50.0% | |
GGCAGGCAAACTAGAACTTG+AGG | + | chr5.3:78709887-78709906 | MS.gene38205:CDS | 50.0% | |
GGCTCTCTCATCACACATAG+TGG | - | chr5.3:78707704-78707723 | None:intergenic | 50.0% | |
TACCACTCGTGTGAGCAGTT+TGG | - | chr5.3:78709818-78709837 | None:intergenic | 50.0% | |
TCTCAAACCCTGGAACTCAG+AGG | - | chr5.3:78710790-78710809 | None:intergenic | 50.0% | |
TGGAGCAGTAGTTACCTGTG+TGG | + | chr5.3:78711438-78711457 | MS.gene38205:CDS | 50.0% | |
TGTCTAGTTGACCTCATGGG+AGG | + | chr5.3:78710648-78710667 | MS.gene38205:CDS | 50.0% | |
! | GAATAGCGAGAGCATGGACA+TGG | - | chr5.3:78707762-78707781 | None:intergenic | 50.0% |
! | TGGAGGCATATGCTTGAACC+TGG | - | chr5.3:78709209-78709228 | None:intergenic | 50.0% |
!! | ACCCGTCCATTTCTGGCATT+TGG | - | chr5.3:78711531-78711550 | None:intergenic | 50.0% |
!! | GACAGCAATGGTTTGCTGAC+AGG | - | chr5.3:78708980-78708999 | None:intergenic | 50.0% |
!! | TGAATCCGCTTTTGTGGAGC+AGG | - | chr5.3:78707535-78707554 | None:intergenic | 50.0% |
!!! | ATTTTGCGAGCAAGGGCATC+TGG | + | chr5.3:78708482-78708501 | MS.gene38205:CDS | 50.0% |
ACATCCTTCCGCAGTTGACC+AGG | + | chr5.3:78707807-78707826 | MS.gene38205:CDS | 55.0% | |
AGCATTCTGGGCATCCTTGG+GGG | + | chr5.3:78709240-78709259 | MS.gene38205:CDS | 55.0% | |
CAGCATTCTGGGCATCCTTG+GGG | + | chr5.3:78709239-78709258 | MS.gene38205:CDS | 55.0% | |
CCCGGTCATTCAAAGGCTAC+TGG | + | chr5.3:78707565-78707584 | MS.gene38205:CDS | 55.0% | |
CCTGGAACTCAGAGGCCAAA+GGG | - | chr5.3:78710782-78710801 | None:intergenic | 55.0% | |
CCTTAGCCCCAATGAGCAGA+AGG | + | chr5.3:78711198-78711217 | MS.gene38205:CDS | 55.0% | |
CCTTCTGCTCATTGGGGCTA+AGG | - | chr5.3:78711201-78711220 | None:intergenic | 55.0% | |
CCTTTGGCCTCTGAGTTCCA+GGG | + | chr5.3:78710780-78710799 | MS.gene38205:CDS | 55.0% | |
CTGCTCATTGGGGCTAAGGT+GGG | - | chr5.3:78711197-78711216 | None:intergenic | 55.0% | |
GACAGCATTCTGGGCATCCT+TGG | + | chr5.3:78709237-78709256 | MS.gene38205:CDS | 55.0% | |
GATGCCCAGAATGCTGTCCA+AGG | - | chr5.3:78709235-78709254 | None:intergenic | 55.0% | |
GGATCGCCGATGACAACTTC+AGG | - | chr5.3:78710128-78710147 | None:intergenic | 55.0% | |
GGGTGGTAAGGCTGCTCTTA+AGG | + | chr5.3:78711462-78711481 | MS.gene38205:CDS | 55.0% | |
GTAGTTACCTGTGTGGAGGG+TGG | + | chr5.3:78711445-78711464 | MS.gene38205:CDS | 55.0% | |
GTTACCTGGTCAACTGCGGA+AGG | - | chr5.3:78707814-78707833 | None:intergenic | 55.0% | |
TACCTGTGTGGAGGGTGGTA+AGG | + | chr5.3:78711450-78711469 | MS.gene38205:CDS | 55.0% | |
TCCACATCGCGAACATACGG+TGG | + | chr5.3:78710597-78710616 | MS.gene38205:CDS | 55.0% | |
TCCACCGTATGTTCGCGATG+TGG | - | chr5.3:78710601-78710620 | None:intergenic | 55.0% | |
TCGCGAACATACGGTGGAAC+TGG | + | chr5.3:78710603-78710622 | MS.gene38205:CDS | 55.0% | |
TCTGCTCATTGGGGCTAAGG+TGG | - | chr5.3:78711198-78711217 | None:intergenic | 55.0% | |
TGTTCAGGCGTAGCATCTGG+AGG | - | chr5.3:78708596-78708615 | None:intergenic | 55.0% | |
! | GATGAGGGTGTGTGCGATTG+TGG | + | chr5.3:78707378-78707397 | MS.gene38205:CDS | 55.0% |
!! | AGCAAGGGCATCTGGAAAGG+GGG | + | chr5.3:78708490-78708509 | MS.gene38205:CDS | 55.0% |
!! | ATCCGCTTTTGTGGAGCAGG+TGG | - | chr5.3:78707532-78707551 | None:intergenic | 55.0% |
!! | ATGCGGCTTTGAGCATCGGT+AGG | - | chr5.3:78710549-78710568 | None:intergenic | 55.0% |
!! | CGAGCAAGGGCATCTGGAAA+GGG | + | chr5.3:78708488-78708507 | MS.gene38205:CDS | 55.0% |
!! | GAGCAAGGGCATCTGGAAAG+GGG | + | chr5.3:78708489-78708508 | MS.gene38205:CDS | 55.0% |
!! | GGCGCTGGATCCAAGTTTTC+TGG | - | chr5.3:78708197-78708216 | None:intergenic | 55.0% |
!! | TGGTTTGCTGACAGGCAAGC+TGG | - | chr5.3:78708972-78708991 | None:intergenic | 55.0% |
AGCCTTACCACCCTCCACAC+AGG | - | chr5.3:78711455-78711474 | None:intergenic | 60.0% | |
CAGACATGCCCAACCTCTGC+AGG | - | chr5.3:78710863-78710882 | None:intergenic | 60.0% | |
CCCTGGAACTCAGAGGCCAA+AGG | - | chr5.3:78710783-78710802 | None:intergenic | 60.0% | |
CCCTTTGGCCTCTGAGTTCC+AGG | + | chr5.3:78710779-78710798 | MS.gene38205:CDS | 60.0% | |
CGCTGTTCAGGCGTAGCATC+TGG | - | chr5.3:78708599-78708618 | None:intergenic | 60.0% | |
CTCATTGGGGCTAAGGTGGG+TGG | - | chr5.3:78711194-78711213 | None:intergenic | 60.0% | |
GCCCAAACTGCTCACACGAG+TGG | + | chr5.3:78709813-78709832 | MS.gene38205:CDS | 60.0% | |
!! | GCGAGCAAGGGCATCTGGAA+AGG | + | chr5.3:78708487-78708506 | MS.gene38205:CDS | 60.0% |
TGGGGCTAAGGTGGGTGGCC+AGG | - | chr5.3:78711189-78711208 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 78706046 | 78711897 | 78706046 | ID=MS.gene38205 |
chr5.3 | mRNA | 78706046 | 78711897 | 78706046 | ID=MS.gene38205.t1;Parent=MS.gene38205 |
chr5.3 | exon | 78706046 | 78706183 | 78706046 | ID=MS.gene38205.t1.exon1;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78706046 | 78706183 | 78706046 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78706496 | 78706753 | 78706496 | ID=MS.gene38205.t1.exon2;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78706496 | 78706753 | 78706496 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78707376 | 78707828 | 78707376 | ID=MS.gene38205.t1.exon3;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78707376 | 78707828 | 78707376 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78708023 | 78708298 | 78708023 | ID=MS.gene38205.t1.exon4;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78708023 | 78708298 | 78708023 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78708467 | 78708636 | 78708467 | ID=MS.gene38205.t1.exon5;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78708467 | 78708636 | 78708467 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78708918 | 78709130 | 78708918 | ID=MS.gene38205.t1.exon6;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78708918 | 78709130 | 78708918 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78709210 | 78709396 | 78709210 | ID=MS.gene38205.t1.exon7;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78709210 | 78709396 | 78709210 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78709615 | 78709666 | 78709615 | ID=MS.gene38205.t1.exon8;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78709615 | 78709666 | 78709615 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78709760 | 78709989 | 78709760 | ID=MS.gene38205.t1.exon9;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78709760 | 78709989 | 78709760 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78710098 | 78710196 | 78710098 | ID=MS.gene38205.t1.exon10;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78710098 | 78710196 | 78710098 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78710285 | 78710943 | 78710285 | ID=MS.gene38205.t1.exon11;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78710285 | 78710943 | 78710285 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78711051 | 78711548 | 78711051 | ID=MS.gene38205.t1.exon12;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78711051 | 78711548 | 78711051 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
chr5.3 | exon | 78711642 | 78711897 | 78711642 | ID=MS.gene38205.t1.exon13;Parent=MS.gene38205.t1 |
chr5.3 | CDS | 78711642 | 78711897 | 78711642 | ID=cds.MS.gene38205.t1;Parent=MS.gene38205.t1 |
Gene Sequence |
Protein sequence |