AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38646

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38646.t1 MTR_2g097020 79.941 673 114 5 1 658 1 667 0.0 1048
MS.gene38646.t1 MTR_2g095400 76.867 683 87 8 1 658 1 637 0.0 975
MS.gene38646.t1 MTR_4g046643 74.030 670 130 5 1 642 1 654 0.0 936
MS.gene38646.t1 MTR_2g097010 73.939 683 148 5 1 658 1 678 0.0 927
MS.gene38646.t1 MTR_2g097000 68.217 387 81 5 310 658 7 389 6.89e-168 485
MS.gene38646.t1 MTR_4g126200 76.046 263 49 3 398 658 3 253 7.72e-133 390
MS.gene38646.t1 MTR_3g067815 36.819 679 339 15 10 653 13 636 2.09e-130 398
MS.gene38646.t1 MTR_5g079940 36.418 670 350 16 21 656 492 1119 3.67e-121 387
MS.gene38646.t1 MTR_4g006760 33.383 671 341 15 21 654 24 625 6.82e-104 329
MS.gene38646.t1 MTR_4g131350 34.763 676 330 19 21 656 77 681 1.60e-103 330
MS.gene38646.t1 MTR_4g125920 34.324 673 337 19 21 656 24 628 1.40e-101 323
MS.gene38646.t1 MTR_3g067855 45.923 233 107 6 425 656 123 337 7.58e-50 178
MS.gene38646.t1 MTR_3g067845 37.500 264 144 6 395 656 6 250 6.36e-36 137
MS.gene38646.t1 MTR_8g446460 54.015 137 56 4 9 142 107 239 6.67e-34 132
MS.gene38646.t1 MTR_4g126180 69.149 94 29 0 307 400 3 96 1.33e-32 122
MS.gene38646.t1 MTR_4g131310 24.490 441 237 12 21 442 24 387 6.58e-27 114
MS.gene38646.t1 MTR_4g131310 60.938 64 25 0 583 646 391 454 4.42e-18 87.8
MS.gene38646.t1 MTR_2g066850 61.176 85 28 3 2 84 66 147 5.25e-21 98.6
MS.gene38646.t1 MTR_2g075630 66.154 65 19 2 2 66 67 128 1.78e-19 89.4
MS.gene38646.t1 MTR_3g067825 45.745 94 46 2 567 656 10 102 5.59e-17 77.8
MS.gene38646.t1 MTR_8g063010 55.696 79 30 3 18 96 57 130 4.19e-16 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38646.t1 AT1G13790 44.712 539 251 8 138 649 208 726 6.02e-132 405
MS.gene38646.t1 AT1G13790 44.712 539 251 8 138 649 208 726 6.02e-132 405
MS.gene38646.t1 AT3G48670 34.139 662 344 13 32 656 38 644 5.13e-103 327
MS.gene38646.t1 AT3G48670 34.139 662 344 13 32 656 38 644 5.13e-103 327
MS.gene38646.t1 AT3G48670 34.139 662 344 13 32 656 38 644 5.13e-103 327
MS.gene38646.t1 AT3G12550 33.626 684 358 14 16 657 8 637 2.50e-102 325
MS.gene38646.t1 AT3G12550 33.577 685 358 15 16 657 8 638 8.91e-101 321
MS.gene38646.t1 AT3G12550 33.577 685 358 15 16 657 8 638 8.91e-101 321
MS.gene38646.t1 AT3G12550 33.577 685 358 15 16 657 8 638 8.91e-101 321
MS.gene38646.t1 AT1G15910 32.258 682 357 17 16 657 18 634 4.21e-92 298
MS.gene38646.t1 AT5G59390 35.932 526 290 10 149 647 34 539 6.83e-88 285
MS.gene38646.t1 AT5G59390 35.932 526 290 10 149 647 34 539 6.83e-88 285
MS.gene38646.t1 AT5G59390 35.932 526 290 10 149 647 34 539 6.83e-88 285
MS.gene38646.t1 AT4G00380 31.222 679 370 15 15 657 18 635 8.68e-86 282
MS.gene38646.t1 AT4G00380 31.222 679 370 15 15 657 18 635 8.68e-86 282
MS.gene38646.t1 AT1G80790 32.448 678 361 13 15 657 19 634 1.06e-85 281
MS.gene38646.t1 AT1G80790 32.448 678 361 13 15 657 19 634 1.06e-85 281
MS.gene38646.t1 AT5G59390 35.593 531 290 11 149 647 34 544 1.34e-85 279
MS.gene38646.t1 AT5G59390 35.593 531 290 11 149 647 34 544 1.34e-85 279
MS.gene38646.t1 AT4G00380 34.438 543 298 10 148 657 90 607 3.06e-85 280
MS.gene38646.t1 AT4G01180 34.875 562 289 14 130 647 11 539 1.35e-81 268
MS.gene38646.t1 AT3G12550 31.167 600 317 14 16 573 8 553 6.25e-70 238
MS.gene38646.t1 AT4G01780 35.666 443 199 10 216 656 111 469 3.76e-64 219
MS.gene38646.t1 AT3G29375 41.981 212 99 4 446 656 38 226 1.02e-42 154
MS.gene38646.t1 AT1G80790 27.511 458 251 10 15 437 19 430 5.69e-41 156
MS.gene38646.t1 AT3G29375 41.981 212 99 4 446 656 161 349 1.88e-40 152
MS.gene38646.t1 AT3G29375 36.719 128 60 2 446 573 38 144 2.54e-15 74.7
MS.gene38646.t1 AT2G16490 42.105 76 44 0 582 657 74 149 5.02e-14 71.2

Find 136 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTGCAATTGTTGAATT+TGG 0.094302 6.2:+56242802 MS.gene38646:CDS
ATTTCCATTGCTTAATTAAA+TGG 0.098910 6.2:-56245554 None:intergenic
GGGGATTTGAAAACGGTTTC+TGG 0.111458 6.2:+56243009 MS.gene38646:CDS
TTCATTGGTCTTCAGCTTTA+AGG 0.118185 6.2:-56243088 None:intergenic
CACGAGTATATTCTAAATTT+TGG 0.119844 6.2:-56242198 None:intergenic
ACTTGATATTAAGCCATTTC+TGG 0.218339 6.2:+56244903 MS.gene38646:CDS
TGTTGTCTGTTTCAATTCAT+TGG 0.248854 6.2:-56243103 None:intergenic
TTCGTTGGTTAATGTGAATT+TGG 0.249953 6.2:+56242591 MS.gene38646:CDS
GGCAAACACCTCCAGGAAAA+AGG 0.252537 6.2:+56242988 MS.gene38646:CDS
TAAGCAATGGAAATCAAATA+AGG 0.267301 6.2:+56245563 MS.gene38646:CDS
GAGCGAGGAGATAGACTATT+TGG 0.286214 6.2:+56242922 MS.gene38646:CDS
TAGCTTGAGTGTTGTTCTTT+GGG 0.290615 6.2:-56244855 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.290672 6.2:+56243182 MS.gene38646:CDS
ATAGCTTGAGTGTTGTTCTT+TGG 0.293353 6.2:-56244856 None:intergenic
TAGTCCTTGTTGTAGCAAAA+TGG 0.309878 6.2:-56242319 None:intergenic
CTCTTAGCTGCTTCCAGAAA+TGG 0.310177 6.2:-56244916 None:intergenic
TTTGCTCCATCACTTTCCTT+AGG 0.315993 6.2:-56243152 None:intergenic
ACAGCTGAAAGGAGCTTTCC+AGG 0.321504 6.2:+56244138 MS.gene38646:CDS
AATTCCAGAGTTCCGGTATT+GGG 0.334900 6.2:-56245491 None:intergenic
GGAAAAGGAAGAGGAATTAG+AGG 0.352913 6.2:+56244231 MS.gene38646:CDS
TCAACAAACACTGGTTGTTC+AGG 0.353904 6.2:+56244267 MS.gene38646:CDS
TCTTTAAAATTCCAGAGTTC+CGG 0.355321 6.2:-56245498 None:intergenic
CTGTGGTAAGCGGGATTACT+TGG 0.359149 6.2:+56242885 MS.gene38646:CDS
GCAGGCTGAACGCAAGTATC+AGG 0.361989 6.2:+56243418 MS.gene38646:CDS
ATATACTCGTGAATCTGATT+TGG 0.366588 6.2:+56242210 MS.gene38646:CDS
TTGCTCCATCACTTTCCTTA+GGG 0.374227 6.2:-56243151 None:intergenic
GAAGGATCCAACGAAAATTA+AGG 0.375245 6.2:+56242711 MS.gene38646:CDS
TCGTTGGTTAATGTGAATTT+GGG 0.376063 6.2:+56242592 MS.gene38646:CDS
CTCTAATGTGATTCATTACC+TGG 0.385645 6.2:-56244156 None:intergenic
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 6.2:+56245400 MS.gene38646:CDS
AAACAAGCTTGTCTCTGGTT+TGG 0.392657 6.2:+56243059 MS.gene38646:CDS
ATGCTTGAACATTTCAATAA+GGG 0.393919 6.2:+56243183 MS.gene38646:CDS
GAAAAGAAGCCGAGGACAAT+AGG 0.397047 6.2:+56243031 MS.gene38646:CDS
TTTCCATTGCTTAATTAAAT+GGG 0.397793 6.2:-56245553 None:intergenic
TGCAAAACAAGCATTGGAAT+TGG 0.398690 6.2:+56244108 MS.gene38646:CDS
GTATCAGGAGAAAGTATCTA+AGG 0.410358 6.2:+56243433 MS.gene38646:CDS
AAGCTATAATTTCTGTGAAA+AGG 0.426145 6.2:+56244872 MS.gene38646:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 6.2:+56245399 MS.gene38646:CDS
CAGAATGGAGCTGCAGGAAA+AGG 0.433632 6.2:+56244216 MS.gene38646:CDS
AAATTCCAGAGTTCCGGTAT+TGG 0.433634 6.2:-56245492 None:intergenic
AAAGCAAACAAGCTTGTCTC+TGG 0.443077 6.2:+56243054 MS.gene38646:CDS
AGGAGGAGCTGATTATGAAA+GGG 0.447751 6.2:+56242731 MS.gene38646:CDS
ACTGCACTGTGGAACCTTCA+TGG 0.449566 6.2:+56242772 MS.gene38646:CDS
TGAAAAGCTGAAAAGTTTGA+AGG 0.453713 6.2:+56245389 MS.gene38646:CDS
TTGCATCCAGTCCTCTCTCC+AGG 0.453963 6.2:-56244090 None:intergenic
GTTTGCTTTCCTATTGTCCT+CGG 0.455452 6.2:-56243040 None:intergenic
GACTTATCATTACGAACAAC+AGG 0.456419 6.2:-56242484 None:intergenic
CTTCTTCTCAAAATATAGCT+TGG 0.458126 6.2:-56243558 None:intergenic
AGTCCTTGTTGTAGCAAAAT+GGG 0.460972 6.2:-56242318 None:intergenic
AAGCAATGGAAATCAAATAA+GGG 0.461528 6.2:+56245564 MS.gene38646:CDS
ATTGTTTGTTCATAGTGGAT+TGG 0.465199 6.2:+56244829 MS.gene38646:intron
TTACTTGGGTTTACGAAAGC+AGG 0.468698 6.2:+56242900 MS.gene38646:CDS
CCAGTCTGGAGCTGGAAGTT+CGG 0.471555 6.2:+56243468 MS.gene38646:CDS
AGCAATCAGAATGGAGCTGC+AGG 0.472823 6.2:+56244210 MS.gene38646:CDS
TGAAAATGCCAGTCTGGAGC+TGG 0.474792 6.2:+56243460 MS.gene38646:CDS
GGATCATGAAAATGCCAGTC+TGG 0.478798 6.2:+56243454 MS.gene38646:CDS
CAAACTTATATCCCGTGAAA+AGG 0.480262 6.2:+56243496 MS.gene38646:CDS
TATAATTTCTGTGAAAAGGA+TGG 0.482190 6.2:+56244876 MS.gene38646:CDS
ACTTTGAACGGATGCCAACT+TGG 0.493862 6.2:-56245057 None:intergenic
TATGATATCAAGGATATAGT+TGG 0.497256 6.2:+56242967 MS.gene38646:CDS
AGGAAGGAAGGCTTCGTTGA+AGG 0.499099 6.2:+56245521 MS.gene38646:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 6.2:+56245407 MS.gene38646:CDS
AAGGAGGAGCTGATTATGAA+AGG 0.500167 6.2:+56242730 MS.gene38646:CDS
AGCAGAGCACTGTGGTAAGC+GGG 0.500435 6.2:+56242876 MS.gene38646:CDS
GAATGTTGCTAAGGGTTCGT+TGG 0.504072 6.2:+56242576 MS.gene38646:CDS
CACAGTGCAGTAACTTTCAT+CGG 0.504310 6.2:-56242760 None:intergenic
CCGAACTTCCAGCTCCAGAC+TGG 0.505605 6.2:-56243468 None:intergenic
ACTTGTTAAGAATGTTGCTA+AGG 0.507417 6.2:+56242567 MS.gene38646:CDS
TCCAAATTCAACAATTGCAA+AGG 0.510603 6.2:-56242803 None:intergenic
TTATCAGTTACAACTTTGAA+CGG 0.511127 6.2:-56245069 None:intergenic
TATAGTTGGCAAACACCTCC+AGG 0.512464 6.2:+56242981 MS.gene38646:CDS
AGCTACGGTGATGTTAAAGT+TGG 0.513136 6.2:+56242448 MS.gene38646:CDS
GGTATTGGGTACCGACCACT+AGG 0.514631 6.2:-56245477 None:intergenic
AGATAGACTATTTGGTTGGA+TGG 0.515691 6.2:+56242930 MS.gene38646:CDS
ATGAGTTGTTTGTATATCCA+TGG 0.518192 6.2:+56242629 MS.gene38646:CDS
CCAAATTCAACAATTGCAAA+GGG 0.521084 6.2:-56242802 None:intergenic
TTTCCCATTTAATTAAGCAA+TGG 0.524848 6.2:+56245550 MS.gene38646:CDS
ACTGGATGCAAAACAAGCAT+TGG 0.525557 6.2:+56244102 MS.gene38646:CDS
ACAATGCTATGAAGTTAGAA+AGG 0.526734 6.2:+56242845 MS.gene38646:CDS
TTGGATGTTGCAGAAAGAAA+AGG 0.529965 6.2:+56244042 MS.gene38646:intron
CTTGTTAAGAATGTTGCTAA+GGG 0.530987 6.2:+56242568 MS.gene38646:CDS
GGTACCCAATACCGGAACTC+TGG 0.532850 6.2:+56245487 MS.gene38646:CDS
GAGGAGATAGACTATTTGGT+TGG 0.535517 6.2:+56242926 MS.gene38646:CDS
TCGTGATGACTATGATATCA+AGG 0.536854 6.2:+56242957 MS.gene38646:CDS
AAAGTTGTAACTGATAAAGA+AGG 0.540435 6.2:+56245075 MS.gene38646:CDS
TGTGGTAAGCGGGATTACTT+GGG 0.540703 6.2:+56242886 MS.gene38646:CDS
AGAAATCAGCAAGATGCGGC+AGG 0.543540 6.2:+56243400 MS.gene38646:intron
ATAATTTCTGTGAAAAGGAT+GGG 0.545043 6.2:+56244877 MS.gene38646:CDS
TCATGACCTGGAGAGAGGAC+TGG 0.550277 6.2:+56244084 MS.gene38646:CDS
GAGACACACGTGCACAATTG+TGG 0.551386 6.2:+56242363 MS.gene38646:CDS
AATCGAGTGGTGCTCGAAGT+GGG 0.554131 6.2:+56245017 MS.gene38646:CDS
CAAAGGGTAATTGTCCATGA+AGG 0.557538 6.2:-56242786 None:intergenic
TAGTGGTCGGTACCCAATAC+CGG 0.557758 6.2:+56245479 MS.gene38646:CDS
AAAATTGGAAGCAATCAGAA+TGG 0.559788 6.2:+56244201 MS.gene38646:CDS
TTTCTAACTTCATAGCATTG+TGG 0.565243 6.2:-56242843 None:intergenic
AAGGAAGGCTTCGTTGAAGG+AGG 0.570974 6.2:+56245524 MS.gene38646:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.576364 6.2:+56244222 MS.gene38646:CDS
ATGAGGCGAAAGTGTCCCTA+AGG 0.584555 6.2:+56243136 MS.gene38646:CDS
GAAAAGGAAGAGGAATTAGA+GGG 0.585875 6.2:+56244232 MS.gene38646:CDS
AATTAGAAAGTATGTTGCGA+AGG 0.591005 6.2:+56242693 MS.gene38646:CDS
AAAATTCATGACCTGGAGAG+AGG 0.591924 6.2:+56244079 MS.gene38646:CDS
TCACTAGCAGTACTAACAGC+AGG 0.592415 6.2:-56242508 None:intergenic
CTTGAAAGATGATTACTACA+AGG 0.592695 6.2:+56242261 MS.gene38646:CDS
AGTGTCCCTAAGGAAAGTGA+TGG 0.598158 6.2:+56243146 MS.gene38646:CDS
AGACACACGTGCACAATTGT+GGG 0.601497 6.2:+56242364 MS.gene38646:CDS
CAATCGAGTGGTGCTCGAAG+TGG 0.602767 6.2:+56245016 MS.gene38646:CDS
TGTTGAATTTGGACGACAGT+GGG 0.605384 6.2:+56242813 MS.gene38646:CDS
TGCAGTAGCTACAACTCTGA+AGG 0.607260 6.2:+56245437 MS.gene38646:CDS
TCACAAGAAAATTCATGACC+TGG 0.607531 6.2:+56244072 MS.gene38646:CDS
ACTGTGTTAAAGATCCAAGT+TGG 0.608444 6.2:+56245043 MS.gene38646:CDS
GACTAAGAGAAAACTTTCAG+AGG 0.610089 6.2:+56244978 MS.gene38646:CDS
TTGGAGATTGAACAGCTGAA+AGG 0.614196 6.2:+56244127 MS.gene38646:CDS
GGAAGATCTTCAACAAACAC+TGG 0.622373 6.2:+56244258 MS.gene38646:CDS
TAGCAGAGCACTGTGGTAAG+CGG 0.623837 6.2:+56242875 MS.gene38646:CDS
AGAAAATAAAAGCAATCGAG+TGG 0.627831 6.2:+56245004 MS.gene38646:CDS
GACAACAAGCAAACATCATG+AGG 0.628408 6.2:+56243119 MS.gene38646:CDS
GGTTTACGAAAGCAGGAGCG+AGG 0.630260 6.2:+56242907 MS.gene38646:CDS
GTCTGGAGCTGGAAGTTCGG+AGG 0.636966 6.2:+56243471 MS.gene38646:CDS
AGGAAGGCTTCGTTGAAGGA+GGG 0.636979 6.2:+56245525 MS.gene38646:CDS
GAATTTGGACGACAGTGGGA+TGG 0.637082 6.2:+56242817 MS.gene38646:CDS
GTTGTTTGTATATCCATGGA+TGG 0.639733 6.2:+56242633 MS.gene38646:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 6.2:+56245401 MS.gene38646:CDS
AAAGGAAGAGGAATTAGAGG+GGG 0.645418 6.2:+56244234 MS.gene38646:CDS
GAAATGTATATTGAAAGCTA+CGG 0.650258 6.2:+56242433 MS.gene38646:CDS
TGATAAAGAAGGAAACTCCA+AGG 0.654804 6.2:+56245086 MS.gene38646:CDS
AAAAGGAAGAGGAATTAGAG+GGG 0.657317 6.2:+56244233 MS.gene38646:CDS
TTGTTGAATTTGGACGACAG+TGG 0.663290 6.2:+56242812 MS.gene38646:CDS
ATGAGTACAACCCTAGTGGT+CGG 0.671880 6.2:+56245466 MS.gene38646:CDS
GGTTTCTGGAAAAGAAGCCG+AGG 0.676719 6.2:+56243023 MS.gene38646:CDS
CATTAGAAATCAGCAAGATG+CGG 0.680318 6.2:+56243396 MS.gene38646:intron
GGATCCAACGAAAATTAAGG+AGG 0.684524 6.2:+56242714 MS.gene38646:CDS
TGTGGGTGACTTGCATGAGA+CGG 0.697226 6.2:+56242381 MS.gene38646:CDS
CGATGAAAGTTACTGCACTG+TGG 0.699936 6.2:+56242761 MS.gene38646:CDS
TTAAATGAGTACAACCCTAG+TGG 0.705810 6.2:+56245462 MS.gene38646:CDS
GTATTGGGTACCGACCACTA+GGG 0.725721 6.2:-56245476 None:intergenic
AGCTTTCTAGCAGAGCACTG+TGG 0.773857 6.2:+56242868 MS.gene38646:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTTATTAAAAAATAAG+AGG - chr6.2:56243837-56243856 None:intergenic 10.0%
!! TAAGTTATTAAAAAATAAGA+GGG - chr6.2:56243836-56243855 None:intergenic 10.0%
!!! TATGATATTTTAATATTTCA+TGG + chr6.2:56243348-56243367 MS.gene38646:intron 10.0%
!! AATTAAAAACTGTAGATAAT+AGG - chr6.2:56243982-56244001 None:intergenic 15.0%
!! TAATTAGAAAGAATAGTAAT+TGG + chr6.2:56245227-56245246 MS.gene38646:intron 15.0%
!!! ATTTTGAAAAATATTGTTAC+TGG + chr6.2:56242658-56242677 MS.gene38646:CDS 15.0%
!!! TACTAATATATCTATGATTT+TGG + chr6.2:56243283-56243302 MS.gene38646:intron 15.0%
!!! TTTACATTTTATGTGAAAAT+TGG + chr6.2:56244736-56244755 MS.gene38646:intron 15.0%
!! AAATTGAATTGATCCAATAT+TGG + chr6.2:56243219-56243238 MS.gene38646:intron 20.0%
!! ATATGTTAGATATATTTCAC+AGG + chr6.2:56245347-56245366 MS.gene38646:intron 20.0%
!! ATTTATGCTTAGATTTAACA+AGG - chr6.2:56244404-56244423 None:intergenic 20.0%
!! ATTTCCATTGCTTAATTAAA+TGG - chr6.2:56245557-56245576 None:intergenic 20.0%
!! TATTAAAAAATAAGAGGGAT+TGG - chr6.2:56243831-56243850 None:intergenic 20.0%
!! TTAAATCTAAGCATAAATGT+AGG + chr6.2:56244406-56244425 MS.gene38646:intron 20.0%
!! TTTCCATTGCTTAATTAAAT+GGG - chr6.2:56245556-56245575 None:intergenic 20.0%
!!! AAACATTCAAATCATGTTTT+TGG + chr6.2:56244496-56244515 MS.gene38646:intron 20.0%
!!! ATTTTATGCAATTCATAGAA+GGG - chr6.2:56245317-56245336 None:intergenic 20.0%
!!! CAACATACTTTCTAATTTTT+GGG - chr6.2:56242690-56242709 None:intergenic 20.0%
!!! TAAATTGGCTTCTTTAAAAA+TGG + chr6.2:56243732-56243751 MS.gene38646:intron 20.0%
!!! TATTTTATGCAATTCATAGA+AGG - chr6.2:56245318-56245337 None:intergenic 20.0%
! AAAGTTGTAACTGATAAAGA+AGG + chr6.2:56245075-56245094 MS.gene38646:CDS 25.0%
! AAGCAATGGAAATCAAATAA+GGG + chr6.2:56245564-56245583 MS.gene38646:CDS 25.0%
! AAGCTATAATTTCTGTGAAA+AGG + chr6.2:56244872-56244891 MS.gene38646:CDS 25.0%
! AAGTTCTATTAAGACAATGT+TGG + chr6.2:56245163-56245182 MS.gene38646:intron 25.0%
! AATTTACAGGAGAACTAAAT+TGG + chr6.2:56243717-56243736 MS.gene38646:intron 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG + chr6.2:56244877-56244896 MS.gene38646:CDS 25.0%
! ATGCTTGAACATTTCAATAA+GGG + chr6.2:56243183-56243202 MS.gene38646:CDS 25.0%
! ATTCCTTAGATATAGAAACT+AGG - chr6.2:56244604-56244623 None:intergenic 25.0%
! ATTTCATTGTTTGTTCATAG+TGG + chr6.2:56244824-56244843 MS.gene38646:intron 25.0%
! GAAATGTATATTGAAAGCTA+CGG + chr6.2:56242433-56242452 MS.gene38646:CDS 25.0%
! GATTTGAATGTTTGCAAAAT+AGG - chr6.2:56244489-56244508 None:intergenic 25.0%
! TAAGCAATGGAAATCAAATA+AGG + chr6.2:56245563-56245582 MS.gene38646:CDS 25.0%
! TATAATTTCTGTGAAAAGGA+TGG + chr6.2:56244876-56244895 MS.gene38646:CDS 25.0%
! TATGATATCAAGGATATAGT+TGG + chr6.2:56242967-56242986 MS.gene38646:CDS 25.0%
! TATGTGAAAATTGGTAGAAT+CGG + chr6.2:56244745-56244764 MS.gene38646:intron 25.0%
! TCGTGAAAAAATGATGTATT+TGG + chr6.2:56243926-56243945 MS.gene38646:intron 25.0%
! TCTAGATGAGAAGAAAAAAT+TGG + chr6.2:56244186-56244205 MS.gene38646:CDS 25.0%
! TTATCAGTTACAACTTTGAA+CGG - chr6.2:56245072-56245091 None:intergenic 25.0%
! TTTCCCATTTAATTAAGCAA+TGG + chr6.2:56245550-56245569 MS.gene38646:CDS 25.0%
! TTTGAAAGTGATCAATTTAC+AGG + chr6.2:56243704-56243723 MS.gene38646:intron 25.0%
!! AACCAATCTTTTACAAAGTA+GGG + chr6.2:56244353-56244372 MS.gene38646:intron 25.0%
!! ACTTTGTAAAAGATTGGTTA+CGG - chr6.2:56244352-56244371 None:intergenic 25.0%
!! ATGTATATACTTGAGTTTTG+AGG + chr6.2:56244009-56244028 MS.gene38646:intron 25.0%
!! ATTTCACAGGAAATTTTAGA+CGG + chr6.2:56245360-56245379 MS.gene38646:intron 25.0%
!! CACGAGTATATTCTAAATTT+TGG - chr6.2:56242201-56242220 None:intergenic 25.0%
!! GCAACATACTTTCTAATTTT+TGG - chr6.2:56242691-56242710 None:intergenic 25.0%
!! TAACCAATCTTTTACAAAGT+AGG + chr6.2:56244352-56244371 MS.gene38646:intron 25.0%
!!! ATACACTTATTAGCTTTTTG+CGG - chr6.2:56244324-56244343 None:intergenic 25.0%
!!! ATTCCTTCTCATTGATTTAA+AGG + chr6.2:56243243-56243262 MS.gene38646:intron 25.0%
AAAAGTTTGAAGGATGAGTT+CGG + chr6.2:56245399-56245418 MS.gene38646:CDS 30.0%
AAAATTGGAAGCAATCAGAA+TGG + chr6.2:56244201-56244220 MS.gene38646:CDS 30.0%
AATAGTAATTGGTACTGTGT+AGG + chr6.2:56245238-56245257 MS.gene38646:intron 30.0%
AATGCTGCATTATATGCTTT+AGG - chr6.2:56245201-56245220 None:intergenic 30.0%
ACAATGCTATGAAGTTAGAA+AGG + chr6.2:56242845-56242864 MS.gene38646:CDS 30.0%
ACTTGATATTAAGCCATTTC+TGG + chr6.2:56244903-56244922 MS.gene38646:CDS 30.0%
AGAAAATAAAAGCAATCGAG+TGG + chr6.2:56245004-56245023 MS.gene38646:CDS 30.0%
ATAGTAATTGGTACTGTGTA+GGG + chr6.2:56245239-56245258 MS.gene38646:intron 30.0%
ATATACTCGTGAATCTGATT+TGG + chr6.2:56242210-56242229 MS.gene38646:CDS 30.0%
ATCCCTACTTTGTAAAAGAT+TGG - chr6.2:56244358-56244377 None:intergenic 30.0%
ATGAGAAGGAATACCAATAT+TGG - chr6.2:56243235-56243254 None:intergenic 30.0%
ATGAGTTGTTTGTATATCCA+TGG + chr6.2:56242629-56242648 MS.gene38646:CDS 30.0%
ATGCTGCATTATATGCTTTA+GGG - chr6.2:56245200-56245219 None:intergenic 30.0%
ATGTGAAAATTGGTAGAATC+GGG + chr6.2:56244746-56244765 MS.gene38646:intron 30.0%
ATTTGATACAAAAGACCGAA+TGG - chr6.2:56243800-56243819 None:intergenic 30.0%
CATCCTAGTTTCTATATCTA+AGG + chr6.2:56244598-56244617 MS.gene38646:intron 30.0%
CCAAATTCAACAATTGCAAA+GGG - chr6.2:56242805-56242824 None:intergenic 30.0%
CTTCTTCTCAAAATATAGCT+TGG - chr6.2:56243561-56243580 None:intergenic 30.0%
CTTGAAAGATGATTACTACA+AGG + chr6.2:56242261-56242280 MS.gene38646:CDS 30.0%
CTTGTTAAGAATGTTGCTAA+GGG + chr6.2:56242568-56242587 MS.gene38646:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG + chr6.2:56243182-56243201 MS.gene38646:CDS 30.0%
TCACCTTTAAATCAATGAGA+AGG - chr6.2:56243249-56243268 None:intergenic 30.0%
TCCAAATTCAACAATTGCAA+AGG - chr6.2:56242806-56242825 None:intergenic 30.0%
TGAAAAGCTGAAAAGTTTGA+AGG + chr6.2:56245389-56245408 MS.gene38646:CDS 30.0%
TGTTAGAATTCCTTACTCTA+TGG + chr6.2:56243773-56243792 MS.gene38646:intron 30.0%
TGTTGTCTGTTTCAATTCAT+TGG - chr6.2:56243106-56243125 None:intergenic 30.0%
TTTCTAACTTCATAGCATTG+TGG - chr6.2:56242846-56242865 None:intergenic 30.0%
! AAGAAGCAGGTAATGTATTT+TGG + chr6.2:56243575-56243594 MS.gene38646:intron 30.0%
! AATTAGAAAGTATGTTGCGA+AGG + chr6.2:56242693-56242712 MS.gene38646:CDS 30.0%
! ACTTGTTAAGAATGTTGCTA+AGG + chr6.2:56242567-56242586 MS.gene38646:CDS 30.0%
! ATCTTTTACAAAGTAGGGAT+AGG + chr6.2:56244358-56244377 MS.gene38646:intron 30.0%
! TCGTTGGTTAATGTGAATTT+GGG + chr6.2:56242592-56242611 MS.gene38646:CDS 30.0%
! TTCGTTGGTTAATGTGAATT+TGG + chr6.2:56242591-56242610 MS.gene38646:CDS 30.0%
!! ATTGTTTGTTCATAGTGGAT+TGG + chr6.2:56244829-56244848 MS.gene38646:intron 30.0%
!! GAATTTTAAAGAAGGAAGGA+AGG + chr6.2:56245509-56245528 MS.gene38646:CDS 30.0%
!! GGAATCTTATTTAAGTTGCT+TGG + chr6.2:56244517-56244536 MS.gene38646:intron 30.0%
!! TCTGGAATTTTAAAGAAGGA+AGG + chr6.2:56245505-56245524 MS.gene38646:CDS 30.0%
!! TCTTTAAAATTCCAGAGTTC+CGG - chr6.2:56245501-56245520 None:intergenic 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG + chr6.2:56243881-56243900 MS.gene38646:intron 30.0%
!! TTTTTCAAAATGACCATCCA+TGG - chr6.2:56242649-56242668 None:intergenic 30.0%
!!! GAACTCTGGAATTTTAAAGA+AGG + chr6.2:56245501-56245520 MS.gene38646:CDS 30.0%
!!! TACACTTATTAGCTTTTTGC+GGG - chr6.2:56244323-56244342 None:intergenic 30.0%
AAAAGGAAGAGGAATTAGAG+GGG + chr6.2:56244233-56244252 MS.gene38646:CDS 35.0%
AAAGTTTGAAGGATGAGTTC+GGG + chr6.2:56245400-56245419 MS.gene38646:CDS 35.0%
ACTGTGTTAAAGATCCAAGT+TGG + chr6.2:56245043-56245062 MS.gene38646:CDS 35.0%
AGATAGACTATTTGGTTGGA+TGG + chr6.2:56242930-56242949 MS.gene38646:CDS 35.0%
CAAACTTATATCCCGTGAAA+AGG + chr6.2:56243496-56243515 MS.gene38646:CDS 35.0%
CATTAGAAATCAGCAAGATG+CGG + chr6.2:56243396-56243415 MS.gene38646:intron 35.0%
CCCTTTGCAATTGTTGAATT+TGG + chr6.2:56242802-56242821 MS.gene38646:CDS 35.0%
CTAACAACACTCTTTGTGAT+TGG - chr6.2:56243759-56243778 None:intergenic 35.0%
CTCTAATGTGATTCATTACC+TGG - chr6.2:56244159-56244178 None:intergenic 35.0%
GAAAAGGAAGAGGAATTAGA+GGG + chr6.2:56244232-56244251 MS.gene38646:CDS 35.0%
GAAGGATCCAACGAAAATTA+AGG + chr6.2:56242711-56242730 MS.gene38646:CDS 35.0%
GACTAAGAGAAAACTTTCAG+AGG + chr6.2:56244978-56244997 MS.gene38646:CDS 35.0%
GACTTATCATTACGAACAAC+AGG - chr6.2:56242487-56242506 None:intergenic 35.0%
GGAAAAAGGGGATTTGAAAA+CGG + chr6.2:56243002-56243021 MS.gene38646:CDS 35.0%
GTATTTGGCAGAAGAACATA+AGG + chr6.2:56243941-56243960 MS.gene38646:intron 35.0%
GTTGTTTGTATATCCATGGA+TGG + chr6.2:56242633-56242652 MS.gene38646:CDS 35.0%
TCACAAGAAAATTCATGACC+TGG + chr6.2:56244072-56244091 MS.gene38646:CDS 35.0%
TCGTGATGACTATGATATCA+AGG + chr6.2:56242957-56242976 MS.gene38646:CDS 35.0%
TGATAAAGAAGGAAACTCCA+AGG + chr6.2:56245086-56245105 MS.gene38646:CDS 35.0%
TGCTGCATTATATGCTTTAG+GGG - chr6.2:56245199-56245218 None:intergenic 35.0%
TGCTGTTGTTAGCACTTATT+TGG + chr6.2:56245279-56245298 MS.gene38646:intron 35.0%
TTAAATGAGTACAACCCTAG+TGG + chr6.2:56245462-56245481 MS.gene38646:CDS 35.0%
TTCACGAAGTTATTGTACCT+TGG - chr6.2:56245106-56245125 None:intergenic 35.0%
TTGGATGTTGCAGAAAGAAA+AGG + chr6.2:56244042-56244061 MS.gene38646:intron 35.0%
! AGTCCTTGTTGTAGCAAAAT+GGG - chr6.2:56242321-56242340 None:intergenic 35.0%
! ATAGCTTGAGTGTTGTTCTT+TGG - chr6.2:56244859-56244878 None:intergenic 35.0%
! TAGCTTGAGTGTTGTTCTTT+GGG - chr6.2:56244858-56244877 None:intergenic 35.0%
! TAGTCCTTGTTGTAGCAAAA+TGG - chr6.2:56242322-56242341 None:intergenic 35.0%
! TTTTCAAATCCCCTTTTTCC+TGG - chr6.2:56243002-56243021 None:intergenic 35.0%
!! GCTATATTTTGAGAAGAAGC+AGG + chr6.2:56243562-56243581 MS.gene38646:CDS 35.0%
!! GTATCAGGAGAAAGTATCTA+AGG + chr6.2:56243433-56243452 MS.gene38646:CDS 35.0%
!! TGCAAAACAAGCATTGGAAT+TGG + chr6.2:56244108-56244127 MS.gene38646:CDS 35.0%
!! TTCATTGGTCTTCAGCTTTA+AGG - chr6.2:56243091-56243110 None:intergenic 35.0%
!!! TTGAGTTTTGAGGACTCTTT+TGG + chr6.2:56244019-56244038 MS.gene38646:intron 35.0%
AAAATTCATGACCTGGAGAG+AGG + chr6.2:56244079-56244098 MS.gene38646:CDS 40.0%
AAACAAGCTTGTCTCTGGTT+TGG + chr6.2:56243059-56243078 MS.gene38646:CDS 40.0%
AAAGCAAACAAGCTTGTCTC+TGG + chr6.2:56243054-56243073 MS.gene38646:CDS 40.0%
AAAGGAAGAGGAATTAGAGG+GGG + chr6.2:56244234-56244253 MS.gene38646:CDS 40.0%
AAATTCCAGAGTTCCGGTAT+TGG - chr6.2:56245495-56245514 None:intergenic 40.0%
AACAGCCAATGCAAAACGTT+CGG + chr6.2:56244569-56244588 MS.gene38646:intron 40.0%
AACCACGTGATTCAGGTAAA+AGG - chr6.2:56244647-56244666 None:intergenic 40.0%
AAGGAGGAGCTGATTATGAA+AGG + chr6.2:56242730-56242749 MS.gene38646:CDS 40.0%
AAGTTTGAAGGATGAGTTCG+GGG + chr6.2:56245401-56245420 MS.gene38646:CDS 40.0%
AATTCCAGAGTTCCGGTATT+GGG - chr6.2:56245494-56245513 None:intergenic 40.0%
ACTGGATGCAAAACAAGCAT+TGG + chr6.2:56244102-56244121 MS.gene38646:CDS 40.0%
AGCTACGGTGATGTTAAAGT+TGG + chr6.2:56242448-56242467 MS.gene38646:CDS 40.0%
AGGAGGAGCTGATTATGAAA+GGG + chr6.2:56242731-56242750 MS.gene38646:CDS 40.0%
CAAAGGGTAATTGTCCATGA+AGG - chr6.2:56242789-56242808 None:intergenic 40.0%
CACAGTGCAGTAACTTTCAT+CGG - chr6.2:56242763-56242782 None:intergenic 40.0%
CAGGTAAAAGGATGTTGCAT+TGG - chr6.2:56244635-56244654 None:intergenic 40.0%
GACAACAAGCAAACATCATG+AGG + chr6.2:56243119-56243138 MS.gene38646:CDS 40.0%
GAGGAGATAGACTATTTGGT+TGG + chr6.2:56242926-56242945 MS.gene38646:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG + chr6.2:56244231-56244250 MS.gene38646:CDS 40.0%
GGAAGATCTTCAACAAACAC+TGG + chr6.2:56244258-56244277 MS.gene38646:CDS 40.0%
GGATCCAACGAAAATTAAGG+AGG + chr6.2:56242714-56242733 MS.gene38646:CDS 40.0%
GTTTGCTTTCCTATTGTCCT+CGG - chr6.2:56243043-56243062 None:intergenic 40.0%
TCCTTACTCTATGGACCATT+CGG + chr6.2:56243782-56243801 MS.gene38646:intron 40.0%
TGTTGAATTTGGACGACAGT+GGG + chr6.2:56242813-56242832 MS.gene38646:CDS 40.0%
TTACTTGGGTTTACGAAAGC+AGG + chr6.2:56242900-56242919 MS.gene38646:CDS 40.0%
TTGCTCCATCACTTTCCTTA+GGG - chr6.2:56243154-56243173 None:intergenic 40.0%
TTGGAGATTGAACAGCTGAA+AGG + chr6.2:56244127-56244146 MS.gene38646:CDS 40.0%
TTGTTGAATTTGGACGACAG+TGG + chr6.2:56242812-56242831 MS.gene38646:CDS 40.0%
TTTGCTCCATCACTTTCCTT+AGG - chr6.2:56243155-56243174 None:intergenic 40.0%
! AAACACCGAACGTTTTGCAT+TGG - chr6.2:56244577-56244596 None:intergenic 40.0%
! AGCTCCTCCTTAATTTTCGT+TGG - chr6.2:56242721-56242740 None:intergenic 40.0%
! ATCCTTTTACCTGAATCACG+TGG + chr6.2:56244642-56244661 MS.gene38646:intron 40.0%
! CTTTTGCAGATCCTTTTCAC+GGG - chr6.2:56243510-56243529 None:intergenic 40.0%
! GCTTTTGCAGATCCTTTTCA+CGG - chr6.2:56243511-56243530 None:intergenic 40.0%
! TCAACAAACACTGGTTGTTC+AGG + chr6.2:56244267-56244286 MS.gene38646:CDS 40.0%
! TTGCCCATTTTGCTACAACA+AGG + chr6.2:56242315-56242334 MS.gene38646:CDS 40.0%
!! CGCATCTTGCTGATTTCTAA+TGG - chr6.2:56243398-56243417 None:intergenic 40.0%
!!! GTTTTGAGGACTCTTTTGGT+TGG + chr6.2:56244023-56244042 MS.gene38646:intron 40.0%
AACAAGCAACCACGTGATTC+AGG - chr6.2:56244654-56244673 None:intergenic 45.0%
ACCGAATGGTCCATAGAGTA+AGG - chr6.2:56243786-56243805 None:intergenic 45.0%
ACTTTGAACGGATGCCAACT+TGG - chr6.2:56245060-56245079 None:intergenic 45.0%
AGACACACGTGCACAATTGT+GGG + chr6.2:56242364-56242383 MS.gene38646:CDS 45.0%
AGTGTCCCTAAGGAAAGTGA+TGG + chr6.2:56243146-56243165 MS.gene38646:CDS 45.0%
ATGAGTACAACCCTAGTGGT+CGG + chr6.2:56245466-56245485 MS.gene38646:CDS 45.0%
CAAACACCTCCAGGAAAAAG+GGG + chr6.2:56242990-56243009 MS.gene38646:CDS 45.0%
CGATGAAAGTTACTGCACTG+TGG + chr6.2:56242761-56242780 MS.gene38646:CDS 45.0%
CTCTTAGCTGCTTCCAGAAA+TGG - chr6.2:56244919-56244938 None:intergenic 45.0%
GAAAAGAAGCCGAGGACAAT+AGG + chr6.2:56243031-56243050 MS.gene38646:CDS 45.0%
GAATGTTGCTAAGGGTTCGT+TGG + chr6.2:56242576-56242595 MS.gene38646:CDS 45.0%
GAGCGAGGAGATAGACTATT+TGG + chr6.2:56242922-56242941 MS.gene38646:CDS 45.0%
GCAAACACCTCCAGGAAAAA+GGG + chr6.2:56242989-56243008 MS.gene38646:CDS 45.0%
GGATCATGAAAATGCCAGTC+TGG + chr6.2:56243454-56243473 MS.gene38646:CDS 45.0%
GGCAATAGCAGAGCAACAAA+AGG + chr6.2:56243902-56243921 MS.gene38646:intron 45.0%
GGGGATTTGAAAACGGTTTC+TGG + chr6.2:56243009-56243028 MS.gene38646:CDS 45.0%
TATAGTTGGCAAACACCTCC+AGG + chr6.2:56242981-56243000 MS.gene38646:CDS 45.0%
TCACTAGCAGTACTAACAGC+AGG - chr6.2:56242511-56242530 None:intergenic 45.0%
TGCAGTAGCTACAACTCTGA+AGG + chr6.2:56245437-56245456 MS.gene38646:CDS 45.0%
TGTGGTAAGCGGGATTACTT+GGG + chr6.2:56242886-56242905 MS.gene38646:CDS 45.0%
! TCAAATCCCCTTTTTCCTGG+AGG - chr6.2:56242999-56243018 None:intergenic 45.0%
AAGGAAGGCTTCGTTGAAGG+AGG + chr6.2:56245524-56245543 MS.gene38646:CDS 50.0%
AATCGAGTGGTGCTCGAAGT+GGG + chr6.2:56245017-56245036 MS.gene38646:CDS 50.0%
ACAGCTGAAAGGAGCTTTCC+AGG + chr6.2:56244138-56244157 MS.gene38646:CDS 50.0%
ACTGCACTGTGGAACCTTCA+TGG + chr6.2:56242772-56242791 MS.gene38646:CDS 50.0%
AGAAATCAGCAAGATGCGGC+AGG + chr6.2:56243400-56243419 MS.gene38646:intron 50.0%
AGCAATCAGAATGGAGCTGC+AGG + chr6.2:56244210-56244229 MS.gene38646:CDS 50.0%
AGGAAGGAAGGCTTCGTTGA+AGG + chr6.2:56245521-56245540 MS.gene38646:CDS 50.0%
AGGAAGGCTTCGTTGAAGGA+GGG + chr6.2:56245525-56245544 MS.gene38646:CDS 50.0%
CAGAATGGAGCTGCAGGAAA+AGG + chr6.2:56244216-56244235 MS.gene38646:CDS 50.0%
CTGTGGTAAGCGGGATTACT+TGG + chr6.2:56242885-56242904 MS.gene38646:CDS 50.0%
GAATTTGGACGACAGTGGGA+TGG + chr6.2:56242817-56242836 MS.gene38646:CDS 50.0%
GAGACACACGTGCACAATTG+TGG + chr6.2:56242363-56242382 MS.gene38646:CDS 50.0%
GGCAAACACCTCCAGGAAAA+AGG + chr6.2:56242988-56243007 MS.gene38646:CDS 50.0%
TAGTGGTCGGTACCCAATAC+CGG + chr6.2:56245479-56245498 MS.gene38646:CDS 50.0%
! GGTTTCTGGAAAAGAAGCCG+AGG + chr6.2:56243023-56243042 MS.gene38646:CDS 50.0%
! TGAAAATGCCAGTCTGGAGC+TGG + chr6.2:56243460-56243479 MS.gene38646:CDS 50.0%
! TGTGGGTGACTTGCATGAGA+CGG + chr6.2:56242381-56242400 MS.gene38646:CDS 50.0%
!! AGCTTTCTAGCAGAGCACTG+TGG + chr6.2:56242868-56242887 MS.gene38646:CDS 50.0%
!! ATGAGGCGAAAGTGTCCCTA+AGG + chr6.2:56243136-56243155 MS.gene38646:CDS 50.0%
!! GTATTGGGTACCGACCACTA+GGG - chr6.2:56245479-56245498 None:intergenic 50.0%
!! TAGCAGAGCACTGTGGTAAG+CGG + chr6.2:56242875-56242894 MS.gene38646:CDS 50.0%
CAATCGAGTGGTGCTCGAAG+TGG + chr6.2:56245016-56245035 MS.gene38646:CDS 55.0%
GAAGGATGAGTTCGGGGATG+AGG + chr6.2:56245407-56245426 MS.gene38646:CDS 55.0%
GCAGGCTGAACGCAAGTATC+AGG + chr6.2:56243418-56243437 MS.gene38646:CDS 55.0%
GGAAGAGGAATTAGAGGGGG+TGG + chr6.2:56244237-56244256 MS.gene38646:CDS 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG + chr6.2:56244222-56244241 MS.gene38646:CDS 55.0%
GGTACCCAATACCGGAACTC+TGG + chr6.2:56245487-56245506 MS.gene38646:CDS 55.0%
GGTTTACGAAAGCAGGAGCG+AGG + chr6.2:56242907-56242926 MS.gene38646:CDS 55.0%
TCATGACCTGGAGAGAGGAC+TGG + chr6.2:56244084-56244103 MS.gene38646:CDS 55.0%
TTGCATCCAGTCCTCTCTCC+AGG - chr6.2:56244093-56244112 None:intergenic 55.0%
! CCAGTCTGGAGCTGGAAGTT+CGG + chr6.2:56243468-56243487 MS.gene38646:CDS 55.0%
!! AGCAGAGCACTGTGGTAAGC+GGG + chr6.2:56242876-56242895 MS.gene38646:CDS 55.0%
!! GGTATTGGGTACCGACCACT+AGG - chr6.2:56245480-56245499 None:intergenic 55.0%
CCGAACTTCCAGCTCCAGAC+TGG - chr6.2:56243471-56243490 None:intergenic 60.0%
! GTCTGGAGCTGGAAGTTCGG+AGG + chr6.2:56243471-56243490 MS.gene38646:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 56242193 56245602 56242193 ID=MS.gene38646
chr6.2 mRNA 56242193 56245602 56242193 ID=MS.gene38646.t1;Parent=MS.gene38646
chr6.2 exon 56242193 56243204 56242193 ID=MS.gene38646.t1.exon1;Parent=MS.gene38646.t1
chr6.2 CDS 56242193 56243204 56242193 ID=cds.MS.gene38646.t1;Parent=MS.gene38646.t1
chr6.2 exon 56243402 56243583 56243402 ID=MS.gene38646.t1.exon2;Parent=MS.gene38646.t1
chr6.2 CDS 56243402 56243583 56243402 ID=cds.MS.gene38646.t1;Parent=MS.gene38646.t1
chr6.2 exon 56244055 56244339 56244055 ID=MS.gene38646.t1.exon3;Parent=MS.gene38646.t1
chr6.2 CDS 56244055 56244339 56244055 ID=cds.MS.gene38646.t1;Parent=MS.gene38646.t1
chr6.2 exon 56244844 56245107 56244844 ID=MS.gene38646.t1.exon4;Parent=MS.gene38646.t1
chr6.2 CDS 56244844 56245107 56244844 ID=cds.MS.gene38646.t1;Parent=MS.gene38646.t1
chr6.2 exon 56245369 56245602 56245369 ID=MS.gene38646.t1.exon5;Parent=MS.gene38646.t1
chr6.2 CDS 56245369 56245602 56245369 ID=cds.MS.gene38646.t1;Parent=MS.gene38646.t1
Gene Sequence

>MS.gene38646

ATGTACCAAAATTTAGAATATACTCGTGAATCTGATTTGGAGTACTACAAACGCATATATTACAAAGACTTGAAAGATGATTACTACAAGGACAAACTCAAAATATCTGATTCAACATATCGTTGCCCATTTTGCTACAACAAGGACTACTACTCTTTGAGTGAGCTATTGAGACACACGTGCACAATTGTGGGTGACTTGCATGAGACGGTTAAAGATATTGCTAAGCATTCAGCTCTTGAAATGTATATTGAAAGCTACGGTGATGTTAAAGTTGGTAAAGATAAGTCTCCTGTTGTTCGTAATGATAAGTCACCTGCTGTTAGTACTGCTAGTGATAAGTCAATTAATTTTAGTATCACTAACGAGAAGTCACTTGTTAAGAATGTTGCTAAGGGTTCGTTGGTTAATGTGAATTTGGGTGATGATGATGATGATGAGTTGTTTGTATATCCATGGATGGTCATTTTGAAAAATATTGTTACTGGTTTTAACCCAAAAATTAGAAAGTATGTTGCGAAGGATCCAACGAAAATTAAGGAGGAGCTGATTATGAAAGGGTTTCATCCGATGAAAGTTACTGCACTGTGGAACCTTCATGGACAATTACCCTTTGCAATTGTTGAATTTGGACGACAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAAAGGAGCTTTCTAGCAGAGCACTGTGGTAAGCGGGATTACTTGGGTTTACGAAAGCAGGAGCGAGGAGATAGACTATTTGGTTGGATGGCACGTCGTGATGACTATGATATCAAGGATATAGTTGGCAAACACCTCCAGGAAAAAGGGGATTTGAAAACGGTTTCTGGAAAAGAAGCCGAGGACAATAGGAAAGCAAACAAGCTTGTCTCTGGTTTGGAAAATACCTTAAAGCTGAAGACCAATGAATTGAAACAGACAACAAGCAAACATCATGAGGCGAAAGTGTCCCTAAGGAAAGTGATGGAGCAAAAAGAGAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAATTAAATTGAATTGATCCAATATTGGTATTCCTTCTCATTGATTTAAAGGTGAAACATTATCATTTTTACTAATATATCTATGATTTTGGTTAGCTTACATTCTATTGCATTTTCGAATGATTTATAGTTGATATGATATTTTAATATTTCATGGTAGCTGAGTCTGTTTCATATTGTTCCATTAGAAATCAGCAAGATGCGGCAGGCTGAACGCAAGTATCAGGAGAAAGTATCTAAGGATCATGAAAATGCCAGTCTGGAGCTGGAAGTTCGGAGGAACAAACTTATATCCCGTGAAAAGGATCTGCAAAAGCGTCAAGAAGATAATCATAATGAGAGAACCAAGCTATATTTTGAGAAGAAGCAGGTAATGTATTTTGGCTCTTTGAATTCATCGTAGCAAAGCTAGATAAATAATTCTAACTTTTTAACTCTCTCATGAACACATTTTTTCTGATAGTGTGTTTCTAAAATTGTAACACATTTCTTTGAAAGTGATCAATTTACAGGAGAACTAAATTGGCTTCTTTAAAAATGGACCAATCACAAAGAGTGTTGTTAGAATTCCTTACTCTATGGACCATTCGGTCTTTTGTATCAAATTACGTACACCAATCCCTCTTATTTTTTAATAACTTATGACGAATTAAATTCGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCAATAGCAGAGCAACAAAAGGCTCGTGAAAAAATGATGTATTTGGCAGAAGAACATAAGGCACGTAGTTCATTTTCCTATTATCTACAGTTTTTAATTAAGTTACATGTATATACTTGAGTTTTGAGGACTCTTTTGGTTGGATGTTGCAGAAAGAAAAGGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTGGATGCAAAACAAGCATTGGAATTGGAGATTGAACAGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTAGAGATACTGATCTAGATGAGAAGAAAAAATTGGAAGCAATCAGAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGGGTGGAAGATCTTCAACAAACACTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGCTAATAAGTGTATGTCTTCCGTAACCAATCTTTTACAAAGTAGGGATAGGTTTTTTATTTGTAAAAATTTCCTTGTTAAATCTAAGCATAAATGTAGGATAATTTATATTTTTTAATTGACATAAAATTGTTTTATAATAATTATAGAAGAGTGTCCTATTTTGCAAACATTCAAATCATGTTTTTGGAATCTTATTTAAGTTGCTTGGAAGACAGTGTCTTGTTCACATGTATTTACAACAGCCAATGCAAAACGTTCGGTGTTTTCATCCTAGTTTCTATATCTAAGGAATTAAATTTTCCAATGCAACATCCTTTTACCTGAATCACGTGGTTGCTTGTTTAAACTATATATTAGCTATCTAGTTGTTTGTCTCTAAAGATGATGATTTTAATACATAAAGTTTTACATTTTATGTGAAAATTGGTAGAATCGGGTCAAGTTTATGAGAAGAGCATATTTTCTTCATACATTTTTAGTTAATATGTCATGATTTCATTGTTTGTTCATAGTGGATTGGCTGCCCAAAGAACAACACTCAAGCTATAATTTCTGTGAAAAGGATGGGTGAACTTGATATTAAGCCATTTCTGGAAGCAGCTAAGAGAAAATTTTCTAATGAAATGAATGAGAAAGCAGCAACTAAGACTAAGAGAAAACTTTCAGAGGCTGAGAAAATAAAAGCAATCGAGTGGTGCTCGAAGTGGGAAGACTGTGTTAAAGATCCAAGTTGGCATCCGTTCAAAGTTGTAACTGATAAAGAAGGAAACTCCAAGGTACAATAACTTCGTGAATTATGTTTTTTCGTTAAAGTTAATATTTTTTTCTCAAAAGTTCTATTAAGACAATGTTGGATATATTTATCCCCTAAAGCATATAATGCAGCATTTCTTATTAATTAGAAAGAATAGTAATTGGTACTGTGTAGGGATCTATTTACTGAAGCTTGCTGTTGTTAGCACTTATTTGGTTTTATTTGTTTCCCTTCTATGAATTGCATAAAATATGATCTAATATATGTTAGATATATTTCACAGGAAATTTTAGACGGAGAAGATGAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAACTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTCGGTACCCAATACCGGAACTCTGGAATTTTAAAGAAGGAAGGAAGGCTTCGTTGAAGGAGGGTGTTTCCCATTTAATTAAGCAATGGAAATCAAATAAGGGAAAGAAAACTTATTGA
Protein sequence

>MS.gene38646.t1

MYQNLEYTRESDLEYYKRIYYKDLKDDYYKDKLKISDSTYRCPFCYNKDYYSLSELLRHTCTIVGDLHETVKDIAKHSALEMYIESYGDVKVGKDKSPVVRNDKSPAVSTASDKSINFSITNEKSLVKNVAKGSLVNVNLGDDDDDELFVYPWMVILKNIVTGFNPKIRKYVAKDPTKIKEELIMKGFHPMKVTALWNLHGQLPFAIVEFGRQWDGFHNAMKLERSFLAEHCGKRDYLGLRKQERGDRLFGWMARRDDYDIKDIVGKHLQEKGDLKTVSGKEAEDNRKANKLVSGLENTLKLKTNELKQTTSKHHEAKVSLRKVMEQKEKMLEHFNKEISKMRQAERKYQEKVSKDHENASLELEVRRNKLISREKDLQKRQEDNHNERTKLYFEKKQKEKEKLHKKIHDLERGLDAKQALELEIEQLKGAFQVMNHIRDTDLDEKKKLEAIRMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLISWIGCPKNNTQAIISVKRMGELDIKPFLEAAKRKFSNEMNEKAATKTKRKLSEAEKIKAIEWCSKWEDCVKDPSWHPFKVVTDKEGNSKEILDGEDEKLKSLKDEFGDEVHDAVATTLKELNEYNPSGRYPIPELWNFKEGRKASLKEGVSHLIKQWKSNKGKKTY