Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38873.t1 | RHN40746.1 | 71.6 | 391 | 93 | 6 | 1 | 379 | 1 | 385 | 9.80E-157 | 563.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38873.t1 | Q9LW83 | 28.2 | 358 | 192 | 15 | 72 | 375 | 74 | 420 | 1.9e-20 | 101.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38873.t1 | G7LA23 | 71.6 | 391 | 93 | 6 | 1 | 379 | 1 | 385 | 7.0e-157 | 563.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059128 | MS.gene38873 | 0.810635 | 1.04E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene01306 | MS.gene38873 | PPI |
| MS.gene38873 | MS.gene32226 | PPI |
| MS.gene38873 | MS.gene28678 | PPI |
| MS.gene01309 | MS.gene38873 | PPI |
| MS.gene01721 | MS.gene38873 | PPI |
| MS.gene01307 | MS.gene38873 | PPI |
| MS.gene002328 | MS.gene38873 | PPI |
| MS.gene067615 | MS.gene38873 | PPI |
| MS.gene02279 | MS.gene38873 | PPI |
| MS.gene75227 | MS.gene38873 | PPI |
| MS.gene38873 | MS.gene002329 | PPI |
| MS.gene065324 | MS.gene38873 | PPI |
| MS.gene33837 | MS.gene38873 | PPI |
| MS.gene38873 | MS.gene002327 | PPI |
| MS.gene88046 | MS.gene38873 | PPI |
| MS.gene052579 | MS.gene38873 | PPI |
| MS.gene38873 | MS.gene01720 | PPI |
| MS.gene84491 | MS.gene38873 | PPI |
| MS.gene48738 | MS.gene38873 | PPI |
| MS.gene02280 | MS.gene38873 | PPI |
| MS.gene02278 | MS.gene38873 | PPI |
| MS.gene99531 | MS.gene38873 | PPI |
| MS.gene025524 | MS.gene38873 | PPI |
| MS.gene38873 | MS.gene84487 | PPI |
| MS.gene28684 | MS.gene38873 | PPI |
| MS.gene026128 | MS.gene38873 | PPI |
| MS.gene01719 | MS.gene38873 | PPI |
| MS.gene84493 | MS.gene38873 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38873.t1 | MTR_8g052420 | 71.611 | 391 | 93 | 6 | 1 | 379 | 1 | 385 | 0.0 | 554 |
| MS.gene38873.t1 | MTR_8g052050 | 68.905 | 402 | 100 | 7 | 1 | 379 | 1 | 400 | 0.0 | 547 |
| MS.gene38873.t1 | MTR_8g052190 | 68.090 | 398 | 101 | 7 | 1 | 379 | 2 | 392 | 0.0 | 543 |
| MS.gene38873.t1 | MTR_8g052190 | 68.090 | 398 | 101 | 7 | 1 | 379 | 2 | 392 | 0.0 | 543 |
| MS.gene38873.t1 | MTR_8g052080 | 68.983 | 403 | 99 | 8 | 1 | 379 | 1 | 401 | 0.0 | 542 |
| MS.gene38873.t1 | MTR_8g052513 | 69.270 | 397 | 87 | 9 | 1 | 379 | 1 | 380 | 0.0 | 525 |
| MS.gene38873.t1 | MTR_8g051600 | 66.751 | 397 | 105 | 7 | 1 | 379 | 1 | 388 | 0.0 | 524 |
| MS.gene38873.t1 | MTR_8g052600 | 69.270 | 397 | 87 | 9 | 1 | 379 | 1 | 380 | 0.0 | 521 |
| MS.gene38873.t1 | MTR_8g052160 | 69.330 | 388 | 82 | 7 | 1 | 379 | 1 | 360 | 0.0 | 516 |
| MS.gene38873.t1 | MTR_8g052520 | 65.829 | 398 | 101 | 7 | 1 | 379 | 1 | 382 | 0.0 | 509 |
| MS.gene38873.t1 | MTR_8g052200 | 66.499 | 397 | 101 | 6 | 1 | 381 | 2 | 382 | 1.16e-180 | 522 |
| MS.gene38873.t1 | MTR_8g052120 | 67.179 | 390 | 96 | 6 | 1 | 379 | 2 | 370 | 8.46e-178 | 514 |
| MS.gene38873.t1 | MTR_8g052320 | 69.542 | 371 | 79 | 8 | 1 | 353 | 1 | 355 | 1.76e-172 | 497 |
| MS.gene38873.t1 | MTR_8g052320 | 64.483 | 290 | 69 | 6 | 41 | 311 | 354 | 628 | 1.98e-117 | 356 |
| MS.gene38873.t1 | MTR_8g052060 | 64.706 | 391 | 95 | 6 | 1 | 379 | 1 | 360 | 1.69e-168 | 490 |
| MS.gene38873.t1 | MTR_1g081665 | 69.146 | 363 | 88 | 7 | 27 | 377 | 47 | 397 | 8.90e-168 | 486 |
| MS.gene38873.t1 | MTR_8g052480 | 66.564 | 326 | 79 | 4 | 1 | 311 | 2 | 312 | 9.06e-152 | 431 |
| MS.gene38873.t1 | MTR_8g052300 | 66.564 | 326 | 79 | 4 | 1 | 311 | 2 | 312 | 9.06e-152 | 431 |
| MS.gene38873.t1 | MTR_8g442370 | 45.501 | 389 | 168 | 12 | 9 | 372 | 10 | 379 | 2.68e-93 | 296 |
| MS.gene38873.t1 | MTR_8g442290 | 43.333 | 390 | 185 | 11 | 6 | 370 | 10 | 388 | 2.26e-92 | 288 |
| MS.gene38873.t1 | MTR_8g051540 | 44.949 | 396 | 176 | 14 | 7 | 372 | 8 | 391 | 6.08e-91 | 290 |
| MS.gene38873.t1 | MTR_8g442270 | 46.049 | 367 | 165 | 11 | 7 | 349 | 9 | 366 | 6.33e-91 | 290 |
| MS.gene38873.t1 | MTR_6g054070 | 64.481 | 183 | 56 | 2 | 117 | 296 | 6 | 182 | 1.02e-78 | 241 |
| MS.gene38873.t1 | MTR_8g051640 | 39.086 | 394 | 163 | 12 | 7 | 370 | 9 | 355 | 9.53e-72 | 239 |
| MS.gene38873.t1 | MTR_8g442310 | 41.667 | 360 | 176 | 8 | 34 | 372 | 1 | 347 | 3.61e-69 | 232 |
| MS.gene38873.t1 | MTR_8g052510 | 60.795 | 176 | 43 | 3 | 1 | 167 | 1 | 159 | 1.14e-63 | 201 |
| MS.gene38873.t1 | MTR_8g052270 | 60.795 | 176 | 43 | 3 | 1 | 167 | 1 | 159 | 1.14e-63 | 201 |
| MS.gene38873.t1 | MTR_8g442340 | 45.933 | 209 | 81 | 8 | 7 | 189 | 8 | 210 | 5.33e-43 | 160 |
| MS.gene38873.t1 | MTR_8g442340 | 46.281 | 121 | 61 | 2 | 252 | 370 | 212 | 330 | 5.03e-25 | 107 |
| MS.gene38873.t1 | MTR_8g052370 | 51.639 | 122 | 27 | 2 | 20 | 134 | 7 | 103 | 1.97e-30 | 113 |
| MS.gene38873.t1 | MTR_2g011150 | 25.341 | 367 | 193 | 12 | 72 | 382 | 78 | 419 | 3.67e-24 | 105 |
| MS.gene38873.t1 | MTR_8g052110 | 61.194 | 67 | 26 | 0 | 180 | 246 | 23 | 89 | 2.87e-23 | 93.2 |
| MS.gene38873.t1 | MTR_4g091780 | 30.400 | 250 | 149 | 6 | 8 | 236 | 10 | 255 | 7.79e-21 | 95.1 |
| MS.gene38873.t1 | MTR_4g091860 | 27.078 | 373 | 198 | 16 | 70 | 381 | 71 | 430 | 5.77e-18 | 86.3 |
| MS.gene38873.t1 | MTR_4g091680 | 25.321 | 312 | 179 | 11 | 70 | 336 | 96 | 398 | 1.47e-17 | 85.1 |
| MS.gene38873.t1 | MTR_8g465570 | 25.203 | 369 | 220 | 13 | 1 | 336 | 1 | 346 | 1.91e-17 | 84.7 |
| MS.gene38873.t1 | MTR_8g465410 | 30.677 | 251 | 132 | 9 | 2 | 225 | 1 | 236 | 8.56e-17 | 82.8 |
| MS.gene38873.t1 | MTR_2g089440 | 27.059 | 255 | 168 | 7 | 10 | 248 | 14 | 266 | 2.66e-16 | 81.3 |
| MS.gene38873.t1 | MTR_4g091690 | 32.828 | 198 | 106 | 5 | 4 | 182 | 27 | 216 | 3.36e-16 | 80.9 |
| MS.gene38873.t1 | MTR_8g465470 | 32.353 | 204 | 98 | 7 | 1 | 180 | 32 | 219 | 6.95e-16 | 80.1 |
| MS.gene38873.t1 | MTR_2g011340 | 24.251 | 367 | 199 | 17 | 72 | 368 | 79 | 436 | 1.08e-15 | 79.3 |
| MS.gene38873.t1 | MTR_4g081650 | 33.333 | 183 | 106 | 8 | 72 | 244 | 75 | 251 | 1.89e-15 | 78.6 |
| MS.gene38873.t1 | MTR_2g081470 | 25.195 | 385 | 225 | 12 | 11 | 339 | 6 | 383 | 2.14e-15 | 78.6 |
| MS.gene38873.t1 | MTR_8g465150 | 26.695 | 236 | 137 | 7 | 10 | 218 | 8 | 234 | 4.25e-15 | 77.4 |
| MS.gene38873.t1 | MTR_8g465580 | 30.864 | 243 | 134 | 8 | 6 | 225 | 5 | 236 | 4.30e-15 | 77.4 |
| MS.gene38873.t1 | MTR_7g056680 | 30.000 | 200 | 120 | 7 | 70 | 255 | 73 | 266 | 6.90e-15 | 77.0 |
| MS.gene38873.t1 | MTR_7g056680 | 30.000 | 200 | 120 | 7 | 70 | 255 | 73 | 266 | 7.23e-15 | 77.0 |
| MS.gene38873.t1 | MTR_7g056680 | 30.000 | 200 | 120 | 7 | 70 | 255 | 73 | 266 | 7.44e-15 | 76.6 |
| MS.gene38873.t1 | MTR_7g056680 | 30.000 | 200 | 120 | 7 | 70 | 255 | 73 | 266 | 7.54e-15 | 76.6 |
| MS.gene38873.t1 | MTR_6g012810 | 30.256 | 195 | 112 | 5 | 11 | 181 | 101 | 295 | 9.76e-15 | 76.3 |
| MS.gene38873.t1 | MTR_6g012810 | 30.570 | 193 | 110 | 5 | 11 | 179 | 101 | 293 | 1.07e-14 | 76.3 |
| MS.gene38873.t1 | MTR_7g056667 | 27.941 | 204 | 123 | 7 | 70 | 257 | 71 | 266 | 1.07e-14 | 76.3 |
| MS.gene38873.t1 | MTR_4g098890 | 30.729 | 192 | 109 | 5 | 30 | 202 | 603 | 789 | 1.19e-14 | 76.6 |
| MS.gene38873.t1 | MTR_5g055070 | 27.755 | 245 | 142 | 6 | 27 | 244 | 15 | 251 | 1.21e-14 | 76.3 |
| MS.gene38873.t1 | MTR_5g055070 | 27.755 | 245 | 142 | 6 | 27 | 244 | 15 | 251 | 1.22e-14 | 76.3 |
| MS.gene38873.t1 | MTR_5g055070 | 27.755 | 245 | 142 | 6 | 27 | 244 | 15 | 251 | 1.47e-14 | 75.9 |
| MS.gene38873.t1 | MTR_4g091670 | 32.039 | 206 | 116 | 8 | 70 | 255 | 74 | 275 | 1.59e-14 | 75.5 |
| MS.gene38873.t1 | MTR_2g011170 | 30.476 | 210 | 128 | 8 | 11 | 202 | 3 | 212 | 1.86e-14 | 75.5 |
| MS.gene38873.t1 | MTR_4g091670 | 32.039 | 206 | 116 | 8 | 70 | 255 | 74 | 275 | 2.20e-14 | 75.1 |
| MS.gene38873.t1 | MTR_4g091670 | 32.039 | 206 | 116 | 8 | 70 | 255 | 74 | 275 | 2.38e-14 | 75.1 |
| MS.gene38873.t1 | MTR_2g011170 | 29.524 | 210 | 130 | 7 | 11 | 202 | 3 | 212 | 2.42e-14 | 75.1 |
| MS.gene38873.t1 | MTR_4g081730 | 28.016 | 257 | 150 | 10 | 24 | 253 | 17 | 265 | 2.78e-14 | 75.1 |
| MS.gene38873.t1 | MTR_3g019390 | 27.178 | 287 | 177 | 12 | 33 | 291 | 28 | 310 | 2.98e-14 | 74.7 |
| MS.gene38873.t1 | MTR_5g067250 | 29.487 | 234 | 141 | 7 | 27 | 240 | 25 | 254 | 3.78e-14 | 74.7 |
| MS.gene38873.t1 | MTR_3g019390 | 27.178 | 287 | 177 | 12 | 33 | 291 | 28 | 310 | 4.62e-14 | 74.3 |
| MS.gene38873.t1 | MTR_7g056617 | 32.258 | 155 | 88 | 5 | 70 | 213 | 79 | 227 | 5.31e-14 | 73.9 |
| MS.gene38873.t1 | MTR_2g089360 | 28.634 | 227 | 133 | 7 | 34 | 248 | 54 | 263 | 6.19e-14 | 73.9 |
| MS.gene38873.t1 | MTR_5g067290 | 24.185 | 368 | 215 | 15 | 27 | 342 | 26 | 381 | 6.50e-14 | 73.2 |
| MS.gene38873.t1 | MTR_4g081750 | 30.000 | 250 | 150 | 10 | 10 | 240 | 4 | 247 | 7.65e-14 | 73.9 |
| MS.gene38873.t1 | MTR_4g081665 | 32.961 | 179 | 105 | 8 | 72 | 240 | 74 | 247 | 9.19e-14 | 73.6 |
| MS.gene38873.t1 | MTR_4g091760 | 27.234 | 235 | 143 | 6 | 24 | 235 | 18 | 247 | 9.76e-14 | 73.6 |
| MS.gene38873.t1 | MTR_4g091800 | 27.907 | 215 | 134 | 5 | 8 | 202 | 19 | 232 | 1.14e-13 | 73.2 |
| MS.gene38873.t1 | MTR_7g056647 | 28.571 | 231 | 138 | 8 | 46 | 255 | 48 | 272 | 1.27e-13 | 73.2 |
| MS.gene38873.t1 | MTR_8g465990 | 29.078 | 282 | 156 | 14 | 1 | 258 | 5 | 266 | 1.29e-13 | 72.8 |
| MS.gene38873.t1 | MTR_4g081675 | 29.297 | 256 | 148 | 10 | 10 | 239 | 3 | 251 | 1.30e-13 | 73.2 |
| MS.gene38873.t1 | MTR_4g091840 | 28.311 | 219 | 128 | 7 | 8 | 202 | 19 | 232 | 1.36e-13 | 72.8 |
| MS.gene38873.t1 | MTR_4g091820 | 27.907 | 215 | 134 | 5 | 8 | 202 | 19 | 232 | 1.65e-13 | 72.8 |
| MS.gene38873.t1 | MTR_8g465990 | 29.078 | 282 | 156 | 14 | 1 | 258 | 5 | 266 | 1.68e-13 | 72.8 |
| MS.gene38873.t1 | MTR_3g020230 | 27.239 | 268 | 164 | 10 | 5 | 248 | 3 | 263 | 1.82e-13 | 72.4 |
| MS.gene38873.t1 | MTR_4g081685 | 30.233 | 258 | 144 | 12 | 10 | 239 | 3 | 252 | 2.04e-13 | 72.4 |
| MS.gene38873.t1 | MTR_8g465990 | 29.078 | 282 | 156 | 14 | 1 | 258 | 5 | 266 | 2.22e-13 | 72.4 |
| MS.gene38873.t1 | MTR_3g051420 | 25.562 | 356 | 210 | 15 | 31 | 339 | 43 | 390 | 2.54e-13 | 72.0 |
| MS.gene38873.t1 | MTR_7g056663 | 32.624 | 141 | 81 | 4 | 72 | 202 | 75 | 211 | 3.17e-13 | 71.6 |
| MS.gene38873.t1 | MTR_2g011160 | 33.871 | 124 | 68 | 3 | 72 | 183 | 75 | 196 | 4.52e-13 | 71.2 |
| MS.gene38873.t1 | MTR_0280s0040 | 28.731 | 268 | 157 | 10 | 4 | 248 | 7 | 263 | 6.02e-13 | 70.9 |
| MS.gene38873.t1 | MTR_2g011160 | 33.871 | 124 | 68 | 3 | 72 | 183 | 75 | 196 | 6.77e-13 | 70.9 |
| MS.gene38873.t1 | MTR_7g056510 | 30.198 | 202 | 121 | 7 | 70 | 257 | 73 | 268 | 1.16e-12 | 69.7 |
| MS.gene38873.t1 | MTR_7g056510 | 30.198 | 202 | 121 | 7 | 70 | 257 | 73 | 268 | 1.24e-12 | 69.7 |
| MS.gene38873.t1 | MTR_7g056640 | 30.573 | 157 | 92 | 5 | 70 | 215 | 101 | 251 | 1.41e-12 | 69.7 |
| MS.gene38873.t1 | MTR_2g011180 | 29.767 | 215 | 129 | 10 | 61 | 255 | 63 | 275 | 1.56e-12 | 69.7 |
| MS.gene38873.t1 | MTR_7g056510 | 30.198 | 202 | 121 | 7 | 70 | 257 | 73 | 268 | 1.57e-12 | 69.3 |
| MS.gene38873.t1 | MTR_3g019420 | 23.560 | 382 | 226 | 14 | 32 | 352 | 27 | 403 | 1.57e-12 | 69.7 |
| MS.gene38873.t1 | MTR_2g011180 | 29.767 | 215 | 129 | 10 | 61 | 255 | 63 | 275 | 1.64e-12 | 69.7 |
| MS.gene38873.t1 | MTR_7g056510 | 30.198 | 202 | 121 | 7 | 70 | 257 | 73 | 268 | 1.72e-12 | 69.3 |
| MS.gene38873.t1 | MTR_7g056510 | 30.198 | 202 | 121 | 7 | 70 | 257 | 63 | 258 | 2.23e-12 | 69.3 |
| MS.gene38873.t1 | MTR_3g019580 | 22.423 | 388 | 242 | 12 | 5 | 336 | 16 | 400 | 2.58e-12 | 68.9 |
| MS.gene38873.t1 | MTR_3g019580 | 23.077 | 390 | 237 | 15 | 5 | 336 | 16 | 400 | 2.77e-12 | 68.6 |
| MS.gene38873.t1 | MTR_3g019580 | 22.423 | 388 | 242 | 12 | 5 | 336 | 16 | 400 | 3.04e-12 | 68.6 |
| MS.gene38873.t1 | MTR_3g019580 | 23.077 | 390 | 237 | 15 | 5 | 336 | 13 | 397 | 3.41e-12 | 68.6 |
| MS.gene38873.t1 | MTR_2g081520 | 27.925 | 265 | 162 | 12 | 11 | 254 | 6 | 262 | 6.42e-12 | 67.4 |
| MS.gene38873.t1 | MTR_2g081520 | 27.925 | 265 | 162 | 12 | 11 | 254 | 6 | 262 | 6.48e-12 | 67.4 |
| MS.gene38873.t1 | MTR_2g011270 | 26.122 | 245 | 149 | 11 | 72 | 291 | 57 | 294 | 6.95e-12 | 67.8 |
| MS.gene38873.t1 | MTR_2g081520 | 27.925 | 265 | 162 | 12 | 11 | 254 | 6 | 262 | 7.37e-12 | 67.4 |
| MS.gene38873.t1 | MTR_2g081520 | 27.925 | 265 | 162 | 12 | 11 | 254 | 6 | 262 | 7.61e-12 | 67.4 |
| MS.gene38873.t1 | MTR_2g081520 | 27.925 | 265 | 162 | 12 | 11 | 254 | 6 | 262 | 7.65e-12 | 67.4 |
| MS.gene38873.t1 | MTR_2g081520 | 27.925 | 265 | 162 | 12 | 11 | 254 | 6 | 262 | 8.88e-12 | 67.4 |
| MS.gene38873.t1 | MTR_0090s0020 | 29.851 | 268 | 147 | 13 | 6 | 248 | 3 | 254 | 8.99e-12 | 67.0 |
| MS.gene38873.t1 | MTR_0090s0020 | 29.851 | 268 | 147 | 13 | 6 | 248 | 3 | 254 | 9.88e-12 | 67.0 |
| MS.gene38873.t1 | MTR_0090s0020 | 29.851 | 268 | 147 | 13 | 6 | 248 | 3 | 254 | 1.02e-11 | 67.0 |
| MS.gene38873.t1 | MTR_0090s0020 | 29.851 | 268 | 147 | 13 | 6 | 248 | 3 | 254 | 1.04e-11 | 67.0 |
| MS.gene38873.t1 | MTR_4g091850 | 27.568 | 185 | 108 | 5 | 70 | 236 | 88 | 264 | 1.16e-11 | 67.0 |
| MS.gene38873.t1 | MTR_4g081640 | 30.041 | 243 | 131 | 12 | 30 | 240 | 23 | 258 | 1.58e-11 | 66.6 |
| MS.gene38873.t1 | MTR_8g465510 | 29.101 | 189 | 117 | 6 | 70 | 244 | 70 | 255 | 1.77e-11 | 66.2 |
| MS.gene38873.t1 | MTR_3g020280 | 25.506 | 247 | 161 | 7 | 25 | 248 | 17 | 263 | 1.99e-11 | 66.2 |
| MS.gene38873.t1 | MTR_7g056537 | 29.412 | 204 | 119 | 9 | 72 | 257 | 171 | 367 | 2.37e-11 | 65.1 |
| MS.gene38873.t1 | MTR_8g013560 | 25.521 | 192 | 125 | 5 | 26 | 202 | 24 | 212 | 2.64e-11 | 65.9 |
| MS.gene38873.t1 | MTR_7g056623 | 31.250 | 144 | 83 | 4 | 70 | 202 | 53 | 191 | 3.31e-11 | 65.5 |
| MS.gene38873.t1 | MTR_8g465980 | 22.973 | 370 | 217 | 11 | 29 | 339 | 22 | 382 | 3.59e-11 | 65.5 |
| MS.gene38873.t1 | MTR_3g102400 | 43.956 | 91 | 41 | 3 | 70 | 152 | 73 | 161 | 4.45e-11 | 65.1 |
| MS.gene38873.t1 | MTR_8g030500 | 34.969 | 163 | 83 | 11 | 72 | 223 | 66 | 216 | 5.18e-11 | 64.7 |
| MS.gene38873.t1 | MTR_3g019530 | 27.731 | 238 | 148 | 9 | 19 | 240 | 23 | 252 | 7.35e-11 | 64.3 |
| MS.gene38873.t1 | MTR_3g019530 | 27.731 | 238 | 148 | 9 | 19 | 240 | 23 | 252 | 7.40e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38873.t1 | AT5G18470 | 31.073 | 354 | 195 | 14 | 32 | 339 | 31 | 381 | 2.10e-35 | 134 |
| MS.gene38873.t1 | AT1G67520 | 32.959 | 267 | 141 | 12 | 72 | 306 | 79 | 339 | 6.01e-23 | 101 |
| MS.gene38873.t1 | AT1G67520 | 42.143 | 140 | 71 | 4 | 72 | 202 | 79 | 217 | 6.02e-22 | 98.2 |
| MS.gene38873.t1 | AT1G67520 | 42.143 | 140 | 71 | 4 | 72 | 202 | 79 | 217 | 7.30e-22 | 98.2 |
| MS.gene38873.t1 | AT1G67520 | 42.143 | 140 | 71 | 4 | 72 | 202 | 86 | 224 | 1.55e-21 | 97.4 |
| MS.gene38873.t1 | AT1G67520 | 42.143 | 140 | 71 | 4 | 72 | 202 | 79 | 217 | 1.68e-21 | 97.1 |
| MS.gene38873.t1 | AT3G16030 | 28.134 | 359 | 193 | 15 | 71 | 375 | 73 | 420 | 1.93e-21 | 97.1 |
| MS.gene38873.t1 | AT3G16030 | 37.572 | 173 | 87 | 6 | 71 | 223 | 84 | 255 | 3.45e-21 | 95.9 |
| MS.gene38873.t1 | AT3G16030 | 37.572 | 173 | 87 | 6 | 71 | 223 | 84 | 255 | 3.45e-21 | 95.9 |
| MS.gene38873.t1 | AT3G16030 | 37.572 | 173 | 87 | 6 | 71 | 223 | 84 | 255 | 3.45e-21 | 95.9 |
| MS.gene38873.t1 | AT3G16030 | 28.319 | 339 | 179 | 14 | 71 | 356 | 84 | 411 | 3.92e-21 | 95.9 |
| MS.gene38873.t1 | AT3G16030 | 37.572 | 173 | 87 | 6 | 71 | 223 | 84 | 255 | 4.83e-21 | 95.9 |
| MS.gene38873.t1 | AT3G16030 | 28.319 | 339 | 179 | 14 | 71 | 356 | 84 | 411 | 7.17e-21 | 95.1 |
| MS.gene38873.t1 | AT3G12000 | 23.907 | 389 | 230 | 15 | 20 | 350 | 36 | 416 | 2.28e-17 | 84.0 |
| MS.gene38873.t1 | AT1G11340 | 24.620 | 329 | 183 | 13 | 70 | 341 | 135 | 455 | 2.47e-16 | 81.3 |
| MS.gene38873.t1 | AT1G11340 | 24.620 | 329 | 183 | 13 | 70 | 341 | 135 | 455 | 2.53e-16 | 81.3 |
| MS.gene38873.t1 | AT1G11340 | 24.924 | 329 | 182 | 14 | 70 | 341 | 67 | 387 | 4.60e-16 | 80.5 |
| MS.gene38873.t1 | AT4G21380 | 25.867 | 375 | 204 | 18 | 20 | 336 | 33 | 391 | 1.26e-15 | 79.0 |
| MS.gene38873.t1 | AT4G21380 | 25.867 | 375 | 204 | 18 | 20 | 336 | 33 | 391 | 1.38e-15 | 79.3 |
| MS.gene38873.t1 | AT1G65790 | 29.851 | 201 | 117 | 10 | 70 | 255 | 77 | 268 | 3.27e-15 | 77.8 |
| MS.gene38873.t1 | AT1G65790 | 29.851 | 201 | 117 | 10 | 70 | 255 | 77 | 268 | 3.27e-15 | 77.8 |
| MS.gene38873.t1 | AT1G65790 | 29.851 | 201 | 117 | 10 | 70 | 255 | 77 | 268 | 5.25e-15 | 77.4 |
| MS.gene38873.t1 | AT3G16030 | 28.148 | 270 | 139 | 11 | 132 | 356 | 8 | 267 | 2.04e-13 | 72.4 |
| MS.gene38873.t1 | AT4G21390 | 29.200 | 250 | 135 | 14 | 11 | 231 | 13 | 249 | 2.16e-12 | 69.3 |
| MS.gene38873.t1 | AT4G21390 | 29.200 | 250 | 135 | 14 | 11 | 231 | 13 | 249 | 2.28e-12 | 69.3 |
| MS.gene38873.t1 | AT1G11330 | 31.034 | 145 | 84 | 5 | 70 | 202 | 82 | 222 | 1.28e-11 | 67.0 |
| MS.gene38873.t1 | AT1G11330 | 31.034 | 145 | 84 | 5 | 70 | 202 | 82 | 222 | 1.28e-11 | 67.0 |
| MS.gene38873.t1 | AT1G11330 | 31.034 | 145 | 84 | 5 | 70 | 202 | 82 | 222 | 1.44e-11 | 66.6 |
| MS.gene38873.t1 | AT4G27300 | 22.388 | 335 | 199 | 12 | 72 | 349 | 76 | 406 | 3.46e-11 | 65.5 |
| MS.gene38873.t1 | AT1G11410 | 26.033 | 242 | 156 | 9 | 32 | 255 | 5 | 241 | 3.92e-11 | 65.5 |
| MS.gene38873.t1 | AT1G11410 | 26.141 | 241 | 155 | 9 | 33 | 255 | 30 | 265 | 5.70e-11 | 64.7 |
| MS.gene38873.t1 | AT1G11410 | 26.141 | 241 | 155 | 9 | 33 | 255 | 37 | 272 | 6.65e-11 | 64.7 |
| MS.gene38873.t1 | AT1G11280 | 27.778 | 198 | 124 | 7 | 72 | 256 | 87 | 278 | 7.65e-11 | 64.3 |
| MS.gene38873.t1 | AT2G19130 | 27.941 | 136 | 96 | 2 | 115 | 248 | 125 | 260 | 7.71e-11 | 64.3 |
| MS.gene38873.t1 | AT1G11280 | 27.778 | 198 | 124 | 7 | 72 | 256 | 87 | 278 | 8.03e-11 | 64.3 |
| MS.gene38873.t1 | AT1G61380 | 26.941 | 219 | 139 | 9 | 59 | 262 | 57 | 269 | 8.19e-11 | 64.3 |
| MS.gene38873.t1 | AT1G11280 | 27.778 | 198 | 124 | 7 | 72 | 256 | 77 | 268 | 8.25e-11 | 64.3 |
| MS.gene38873.t1 | AT1G11280 | 27.778 | 198 | 124 | 7 | 72 | 256 | 77 | 268 | 8.35e-11 | 64.3 |
| MS.gene38873.t1 | AT1G11280 | 27.778 | 198 | 124 | 7 | 72 | 256 | 77 | 268 | 9.44e-11 | 63.9 |
Find 79 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATTCTCTACCAAATTT+AGG | 0.190491 | 8.4:-51546060 | MS.gene38873:CDS |
| AACTGCTGAATCTGAATTAA+TGG | 0.214171 | 8.4:+51546326 | None:intergenic |
| ACGCTAAATTCACCTAAATT+TGG | 0.216337 | 8.4:+51546048 | None:intergenic |
| TAGCTTTACCAAGGCGTAAA+AGG | 0.273942 | 8.4:+51545474 | None:intergenic |
| CTGCATGCGTATTCTATTCA+TGG | 0.285142 | 8.4:-51545534 | MS.gene38873:CDS |
| ATGTTCAATTCACCTTGTTT+TGG | 0.297418 | 8.4:+51546015 | None:intergenic |
| GTTCTATCACTAGATTATTC+TGG | 0.299017 | 8.4:-51546306 | MS.gene38873:CDS |
| ATAATATGTCATTGGTTTCA+TGG | 0.323659 | 8.4:-51546086 | MS.gene38873:CDS |
| TTCGACACAGGATGTTGATT+TGG | 0.332411 | 8.4:-51545509 | MS.gene38873:CDS |
| TTGATGATAAGTACTGTTAC+AGG | 0.336207 | 8.4:-51546381 | MS.gene38873:CDS |
| GGTGAAGAGTAAATGATCTT+TGG | 0.336292 | 8.4:+51546252 | None:intergenic |
| AACGTTGCATTGTCCATGTT+TGG | 0.342039 | 8.4:+51545652 | None:intergenic |
| AAAGTTACCAGTGTTGCTTA+TGG | 0.366121 | 8.4:+51546224 | None:intergenic |
| TTGATCCCAACGATGAAGTT+AGG | 0.370271 | 8.4:-51546129 | MS.gene38873:CDS |
| AAGTTACCAGTGTTGCTTAT+GGG | 0.373428 | 8.4:+51546225 | None:intergenic |
| CTTCAACAACTTCACACAAA+TGG | 0.378989 | 8.4:-51546198 | MS.gene38873:CDS |
| ACTGCTGAATCTGAATTAAT+GGG | 0.394025 | 8.4:+51546327 | None:intergenic |
| TGCCTTGTTTAGAACATAGC+TGG | 0.395094 | 8.4:+51546433 | None:intergenic |
| TAGGTGAATTTAGCGTTGAA+TGG | 0.404516 | 8.4:-51546041 | MS.gene38873:CDS |
| GCTAATGCAGATATATGTTA+TGG | 0.415879 | 8.4:-51545763 | MS.gene38873:CDS |
| AACAAGACATAATATGTCAT+TGG | 0.418165 | 8.4:-51546094 | MS.gene38873:CDS |
| GGGAGGATATACCAACTTGC+AGG | 0.423249 | 8.4:-51545711 | MS.gene38873:CDS |
| AGGTGAATTTAGCGTTGAAT+GGG | 0.449665 | 8.4:-51546040 | MS.gene38873:CDS |
| GGATGTTGATTTGGAGTATC+GGG | 0.449797 | 8.4:-51545500 | MS.gene38873:CDS |
| AGAAACGCGGCAAAGTGTAT+TGG | 0.461030 | 8.4:-51545990 | MS.gene38873:CDS |
| TTCAACAACTTCACACAAAT+GGG | 0.463790 | 8.4:-51546197 | MS.gene38873:CDS |
| TAACTCCTAACTTCATCGTT+GGG | 0.464802 | 8.4:+51546124 | None:intergenic |
| TATGTCATTGGTTTCATGGT+TGG | 0.469539 | 8.4:-51546082 | MS.gene38873:CDS |
| CGATGGTTCATTTCTTCGAA+GGG | 0.475746 | 8.4:-51545832 | MS.gene38873:CDS |
| GATGATGGAAACAATGATAG+TGG | 0.484906 | 8.4:-51545793 | MS.gene38873:CDS |
| AAGATGAGATGTTGGAGAAA+TGG | 0.487353 | 8.4:-51545595 | MS.gene38873:CDS |
| TATATACGTTGAACTTCCGT+TGG | 0.495857 | 8.4:+51545925 | None:intergenic |
| ACTATCATTGTTTCCATCAT+CGG | 0.498739 | 8.4:+51545795 | None:intergenic |
| AGGTTAGAAAGTACCGATGA+TGG | 0.509091 | 8.4:-51545808 | MS.gene38873:CDS |
| TTTCTCTGAAACACCTCACC+AGG | 0.510271 | 8.4:+51545685 | None:intergenic |
| GAGGTGTTTCAGAGAAAGGC+AGG | 0.510939 | 8.4:-51545679 | MS.gene38873:CDS |
| CCAGTGTTGCTTATGGGTTG+AGG | 0.518609 | 8.4:+51546231 | None:intergenic |
| TGGTGAGGTGTTTCAGAGAA+AGG | 0.522259 | 8.4:-51545683 | MS.gene38873:CDS |
| TTAACTCCTAACTTCATCGT+TGG | 0.526534 | 8.4:+51546123 | None:intergenic |
| AGGATGTTGATTTGGAGTAT+CGG | 0.527527 | 8.4:-51545501 | MS.gene38873:CDS |
| TGATATACTTATGGTTGTGG+TGG | 0.531974 | 8.4:-51546530 | MS.gene38873:CDS |
| AGCGGAAAACGTAAAAGTAA+TGG | 0.533129 | 8.4:-51545964 | MS.gene38873:CDS |
| TTGTAATTCAATGTATCACC+TGG | 0.534404 | 8.4:+51546459 | None:intergenic |
| AAAGGCAGGAAGGCCAAACA+TGG | 0.542543 | 8.4:-51545665 | MS.gene38873:CDS |
| ACGATGGTTCATTTCTTCGA+AGG | 0.543027 | 8.4:-51545833 | MS.gene38873:CDS |
| GCCTTGTTTAGAACATAGCT+GGG | 0.544909 | 8.4:+51546434 | None:intergenic |
| ATAAGTACTGTTACAGGCAC+AGG | 0.546649 | 8.4:-51546375 | MS.gene38873:CDS |
| GTGATTGCAAGATGAGATGT+TGG | 0.556493 | 8.4:-51545603 | MS.gene38873:CDS |
| CGTTGGGATCAAAGTGTCTG+TGG | 0.556580 | 8.4:+51546140 | None:intergenic |
| CTATTCATGGAATTCGACAC+AGG | 0.565981 | 8.4:-51545521 | MS.gene38873:CDS |
| TGGAGAAATGGTAATTGCAA+TGG | 0.568966 | 8.4:-51545583 | MS.gene38873:CDS |
| TGTTATGGATATAATAGTGA+TGG | 0.570800 | 8.4:-51545748 | MS.gene38873:CDS |
| GCAAATGATAGTTTGAAGCC+AGG | 0.577293 | 8.4:-51546477 | MS.gene38873:CDS |
| ATACCAACTTGCAGGGACCC+TGG | 0.583981 | 8.4:-51545703 | MS.gene38873:CDS |
| CTGTTACAGGCACAGGAGTG+TGG | 0.584502 | 8.4:-51546368 | MS.gene38873:CDS |
| GGTTCATTTCTTCGAAGGGG+AGG | 0.585987 | 8.4:-51545828 | MS.gene38873:CDS |
| CCTCAACCCATAAGCAACAC+TGG | 0.593316 | 8.4:-51546231 | MS.gene38873:CDS |
| TATGGATATAATAGTGATGG+AGG | 0.594196 | 8.4:-51545745 | MS.gene38873:CDS |
| TGGCACGGTAAATAATCACT+TGG | 0.601582 | 8.4:+51545389 | None:intergenic |
| CAGTAAATAATCACTTGGCA+CGG | 0.603296 | 8.4:+51545374 | None:intergenic |
| TGTTTCAGAGAAAGGCAGGA+AGG | 0.604072 | 8.4:-51545675 | MS.gene38873:CDS |
| GGCAAAGTGTATTGGAAAAG+CGG | 0.607288 | 8.4:-51545982 | MS.gene38873:CDS |
| GGACAATGCAACGTTTGAAG+AGG | 0.608481 | 8.4:-51545644 | MS.gene38873:CDS |
| TCCCAGCTATGTTCTAAACA+AGG | 0.612697 | 8.4:-51546435 | MS.gene38873:CDS |
| AAAATGGGAAGTTTATACGA+TGG | 0.613925 | 8.4:-51545849 | MS.gene38873:CDS |
| TCACCAGGGTCCCTGCAAGT+TGG | 0.616521 | 8.4:+51545700 | None:intergenic |
| ATAAGCAGTAAATAATCACT+TGG | 0.627578 | 8.4:+51545369 | None:intergenic |
| GTTGAATGGGAACCAAAACA+AGG | 0.628040 | 8.4:-51546027 | MS.gene38873:CDS |
| GTTGGGATCAAAGTGTCTGT+GGG | 0.631835 | 8.4:+51546141 | None:intergenic |
| AAATCAGCTCTAAATTCCCA+TGG | 0.632201 | 8.4:-51545448 | MS.gene38873:intron |
| GGAGGATATACCAACTTGCA+GGG | 0.636612 | 8.4:-51545710 | MS.gene38873:CDS |
| AATATTTGAGAACATTCCAA+CGG | 0.640176 | 8.4:-51545941 | MS.gene38873:CDS |
| AACTTGCAGGGACCCTGGTG+AGG | 0.662301 | 8.4:-51545698 | MS.gene38873:CDS |
| GATGGTTCATTTCTTCGAAG+GGG | 0.669861 | 8.4:-51545831 | MS.gene38873:CDS |
| CTGCTGAATCTGAATTAATG+GGG | 0.672536 | 8.4:+51546328 | None:intergenic |
| TTCTCTGAAACACCTCACCA+GGG | 0.699731 | 8.4:+51545686 | None:intergenic |
| ATGGATATAATAGTGATGGA+GGG | 0.710491 | 8.4:-51545744 | MS.gene38873:CDS |
| GAATTGAACATCAAGAAACG+CGG | 0.722575 | 8.4:-51546003 | MS.gene38873:CDS |
| ATGGGACAAAGAGTATACTG+TGG | 0.768311 | 8.4:-51546179 | MS.gene38873:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGTTTTGATATACTTA+TGG | - | chr8.4:51545409-51545428 | MS.gene38873:intron | 15.0% |
| !!! | TCAAATTTTCATATAATTCT+TGG | + | chr8.4:51546394-51546413 | None:intergenic | 15.0% |
| ! | AACAAGACATAATATGTCAT+TGG | - | chr8.4:51545854-51545873 | MS.gene38873:CDS | 25.0% |
| ! | AATATTTGAGAACATTCCAA+CGG | - | chr8.4:51546007-51546026 | MS.gene38873:CDS | 25.0% |
| ! | ATATTATAAGTTACGTACCA+TGG | + | chr8.4:51546520-51546539 | None:intergenic | 25.0% |
| ! | TATTATAAGTTACGTACCAT+GGG | + | chr8.4:51546519-51546538 | None:intergenic | 25.0% |
| ! | TGTTATGGATATAATAGTGA+TGG | - | chr8.4:51546200-51546219 | MS.gene38873:CDS | 25.0% |
| ! | TTGCTTTCGATGTTAAAAAT+GGG | - | chr8.4:51546084-51546103 | MS.gene38873:CDS | 25.0% |
| ! | TTTGCTTTCGATGTTAAAAA+TGG | - | chr8.4:51546083-51546102 | MS.gene38873:CDS | 25.0% |
| !! | TTTTGATATACTTATGGTTG+TGG | - | chr8.4:51545415-51545434 | MS.gene38873:intron | 25.0% |
| !! | TTTTGTCTTCTATTCAATGT+TGG | - | chr8.4:51545540-51545559 | MS.gene38873:CDS | 25.0% |
| !!! | ATAATATGTCATTGGTTTCA+TGG | - | chr8.4:51545862-51545881 | MS.gene38873:CDS | 25.0% |
| AAAATGGGAAGTTTATACGA+TGG | - | chr8.4:51546099-51546118 | MS.gene38873:CDS | 30.0% | |
| AACTGCTGAATCTGAATTAA+TGG | + | chr8.4:51545625-51545644 | None:intergenic | 30.0% | |
| ACGCTAAATTCACCTAAATT+TGG | + | chr8.4:51545903-51545922 | None:intergenic | 30.0% | |
| ACTATCATTGTTTCCATCAT+CGG | + | chr8.4:51546156-51546175 | None:intergenic | 30.0% | |
| ACTGCTGAATCTGAATTAAT+GGG | + | chr8.4:51545624-51545643 | None:intergenic | 30.0% | |
| GATGATTCTCTACCAAATTT+AGG | - | chr8.4:51545888-51545907 | MS.gene38873:CDS | 30.0% | |
| GCTAATGCAGATATATGTTA+TGG | - | chr8.4:51546185-51546204 | MS.gene38873:CDS | 30.0% | |
| GTTCTATCACTAGATTATTC+TGG | - | chr8.4:51545642-51545661 | MS.gene38873:CDS | 30.0% | |
| TATGGATATAATAGTGATGG+AGG | - | chr8.4:51546203-51546222 | MS.gene38873:CDS | 30.0% | |
| TTCAACAACTTCACACAAAT+GGG | - | chr8.4:51545751-51545770 | MS.gene38873:CDS | 30.0% | |
| TTGTAATTCAATGTATCACC+TGG | + | chr8.4:51545492-51545511 | None:intergenic | 30.0% | |
| ! | ATGGATATAATAGTGATGGA+GGG | - | chr8.4:51546204-51546223 | MS.gene38873:CDS | 30.0% |
| ! | TTGATGATAAGTACTGTTAC+AGG | - | chr8.4:51545567-51545586 | MS.gene38873:CDS | 30.0% |
| !! | ATGTTCAATTCACCTTGTTT+TGG | + | chr8.4:51545936-51545955 | None:intergenic | 30.0% |
| !!! | TGATTTTGTTAGCTTTACCA+AGG | + | chr8.4:51546486-51546505 | None:intergenic | 30.0% |
| AAGATGAGATGTTGGAGAAA+TGG | - | chr8.4:51546353-51546372 | MS.gene38873:CDS | 35.0% | |
| AGCGGAAAACGTAAAAGTAA+TGG | - | chr8.4:51545984-51546003 | MS.gene38873:CDS | 35.0% | |
| CTGCTGAATCTGAATTAATG+GGG | + | chr8.4:51545623-51545642 | None:intergenic | 35.0% | |
| CTTCAACAACTTCACACAAA+TGG | - | chr8.4:51545750-51545769 | MS.gene38873:CDS | 35.0% | |
| GAATTGAACATCAAGAAACG+CGG | - | chr8.4:51545945-51545964 | MS.gene38873:CDS | 35.0% | |
| GGTGAAGAGTAAATGATCTT+TGG | + | chr8.4:51545699-51545718 | None:intergenic | 35.0% | |
| TAACTCCTAACTTCATCGTT+GGG | + | chr8.4:51545827-51545846 | None:intergenic | 35.0% | |
| TATATACGTTGAACTTCCGT+TGG | + | chr8.4:51546026-51546045 | None:intergenic | 35.0% | |
| TGATATACTTATGGTTGTGG+TGG | - | chr8.4:51545418-51545437 | MS.gene38873:intron | 35.0% | |
| TGGAGAAATGGTAATTGCAA+TGG | - | chr8.4:51546365-51546384 | MS.gene38873:CDS | 35.0% | |
| TTAACTCCTAACTTCATCGT+TGG | + | chr8.4:51545828-51545847 | None:intergenic | 35.0% | |
| ! | AGGTGAATTTAGCGTTGAAT+GGG | - | chr8.4:51545908-51545927 | MS.gene38873:CDS | 35.0% |
| ! | TAGGTGAATTTAGCGTTGAA+TGG | - | chr8.4:51545907-51545926 | MS.gene38873:CDS | 35.0% |
| ! | TTGGTATATCCTCCCATTTT+TGG | + | chr8.4:51546232-51546251 | None:intergenic | 35.0% |
| !! | AAAGTTACCAGTGTTGCTTA+TGG | + | chr8.4:51545727-51545746 | None:intergenic | 35.0% |
| !! | AAATCAGCTCTAAATTCCCA+TGG | - | chr8.4:51546500-51546519 | MS.gene38873:CDS | 35.0% |
| !! | AAGTTACCAGTGTTGCTTAT+GGG | + | chr8.4:51545726-51545745 | None:intergenic | 35.0% |
| !! | AGGATGTTGATTTGGAGTAT+CGG | - | chr8.4:51546447-51546466 | MS.gene38873:CDS | 35.0% |
| !! | GATGATGGAAACAATGATAG+TGG | - | chr8.4:51546155-51546174 | MS.gene38873:CDS | 35.0% |
| !! | TATGTCATTGGTTTCATGGT+TGG | - | chr8.4:51545866-51545885 | MS.gene38873:CDS | 35.0% |
| AACGTTGCATTGTCCATGTT+TGG | + | chr8.4:51546299-51546318 | None:intergenic | 40.0% | |
| ACGATGGTTCATTTCTTCGA+AGG | - | chr8.4:51546115-51546134 | MS.gene38873:CDS | 40.0% | |
| CGATGGTTCATTTCTTCGAA+GGG | - | chr8.4:51546116-51546135 | MS.gene38873:CDS | 40.0% | |
| CTATTCATGGAATTCGACAC+AGG | - | chr8.4:51546427-51546446 | MS.gene38873:CDS | 40.0% | |
| CTGCATGCGTATTCTATTCA+TGG | - | chr8.4:51546414-51546433 | MS.gene38873:CDS | 40.0% | |
| GATGGTTCATTTCTTCGAAG+GGG | - | chr8.4:51546117-51546136 | MS.gene38873:CDS | 40.0% | |
| GGCAAAGTGTATTGGAAAAG+CGG | - | chr8.4:51545966-51545985 | MS.gene38873:CDS | 40.0% | |
| GTGATTGCAAGATGAGATGT+TGG | - | chr8.4:51546345-51546364 | MS.gene38873:CDS | 40.0% | |
| GTTGAATGGGAACCAAAACA+AGG | - | chr8.4:51545921-51545940 | MS.gene38873:CDS | 40.0% | |
| TGGCACGGTAAATAATCACT+TGG | + | chr8.4:51546562-51546581 | None:intergenic | 40.0% | |
| TTGATCCCAACGATGAAGTT+AGG | - | chr8.4:51545819-51545838 | MS.gene38873:CDS | 40.0% | |
| ! | ATAAGTACTGTTACAGGCAC+AGG | - | chr8.4:51545573-51545592 | MS.gene38873:CDS | 40.0% |
| ! | ATGGGACAAAGAGTATACTG+TGG | - | chr8.4:51545769-51545788 | MS.gene38873:CDS | 40.0% |
| ! | GCAAATGATAGTTTGAAGCC+AGG | - | chr8.4:51545471-51545490 | MS.gene38873:CDS | 40.0% |
| ! | TAGCTTTACCAAGGCGTAAA+AGG | + | chr8.4:51546477-51546496 | None:intergenic | 40.0% |
| ! | TCCCAGCTATGTTCTAAACA+AGG | - | chr8.4:51545513-51545532 | MS.gene38873:CDS | 40.0% |
| ! | TTCGACACAGGATGTTGATT+TGG | - | chr8.4:51546439-51546458 | MS.gene38873:CDS | 40.0% |
| !! | AGGTTAGAAAGTACCGATGA+TGG | - | chr8.4:51546140-51546159 | MS.gene38873:CDS | 40.0% |
| !! | GCCTTGTTTAGAACATAGCT+GGG | + | chr8.4:51545517-51545536 | None:intergenic | 40.0% |
| !! | GGATGTTGATTTGGAGTATC+GGG | - | chr8.4:51546448-51546467 | MS.gene38873:CDS | 40.0% |
| !! | TGCCTTGTTTAGAACATAGC+TGG | + | chr8.4:51545518-51545537 | None:intergenic | 40.0% |
| AGAAACGCGGCAAAGTGTAT+TGG | - | chr8.4:51545958-51545977 | MS.gene38873:CDS | 45.0% | |
| GGACAATGCAACGTTTGAAG+AGG | - | chr8.4:51546304-51546323 | MS.gene38873:CDS | 45.0% | |
| GGAGGATATACCAACTTGCA+GGG | - | chr8.4:51546238-51546257 | MS.gene38873:CDS | 45.0% | |
| TGTTTCAGAGAAAGGCAGGA+AGG | - | chr8.4:51546273-51546292 | MS.gene38873:CDS | 45.0% | |
| ! | GTTGGGATCAAAGTGTCTGT+GGG | + | chr8.4:51545810-51545829 | None:intergenic | 45.0% |
| ! | TGGTGAGGTGTTTCAGAGAA+AGG | - | chr8.4:51546265-51546284 | MS.gene38873:CDS | 45.0% |
| !! | TGATGGAGGGTGCCAAAAAT+GGG | - | chr8.4:51546217-51546236 | MS.gene38873:CDS | 45.0% |
| !! | TTCTCTGAAACACCTCACCA+GGG | + | chr8.4:51546265-51546284 | None:intergenic | 45.0% |
| !! | TTTCTCTGAAACACCTCACC+AGG | + | chr8.4:51546266-51546285 | None:intergenic | 45.0% |
| AAAGGCAGGAAGGCCAAACA+TGG | - | chr8.4:51546283-51546302 | MS.gene38873:CDS | 50.0% | |
| CCTCAACCCATAAGCAACAC+TGG | - | chr8.4:51545717-51545736 | MS.gene38873:CDS | 50.0% | |
| GGGAGGATATACCAACTTGC+AGG | - | chr8.4:51546237-51546256 | MS.gene38873:CDS | 50.0% | |
| GGTTCATTTCTTCGAAGGGG+AGG | - | chr8.4:51546120-51546139 | MS.gene38873:CDS | 50.0% | |
| ! | CGTTGGGATCAAAGTGTCTG+TGG | + | chr8.4:51545811-51545830 | None:intergenic | 50.0% |
| ! | GAGGTGTTTCAGAGAAAGGC+AGG | - | chr8.4:51546269-51546288 | MS.gene38873:CDS | 50.0% |
| ! | TCGGGATACCTTTTACGCCT+TGG | - | chr8.4:51546466-51546485 | MS.gene38873:CDS | 50.0% |
| !! | CCAGTGTTGCTTATGGGTTG+AGG | + | chr8.4:51545720-51545739 | None:intergenic | 50.0% |
| !! | GTGATGGAGGGTGCCAAAAA+TGG | - | chr8.4:51546216-51546235 | MS.gene38873:CDS | 50.0% |
| ATACCAACTTGCAGGGACCC+TGG | - | chr8.4:51546245-51546264 | MS.gene38873:CDS | 55.0% | |
| CTGTTACAGGCACAGGAGTG+TGG | - | chr8.4:51545580-51545599 | MS.gene38873:CDS | 55.0% | |
| !! | TGGAGGGTGCCAAAAATGGG+AGG | - | chr8.4:51546220-51546239 | MS.gene38873:CDS | 55.0% |
| AACTTGCAGGGACCCTGGTG+AGG | - | chr8.4:51546250-51546269 | MS.gene38873:CDS | 60.0% | |
| TCACCAGGGTCCCTGCAAGT+TGG | + | chr8.4:51546251-51546270 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 51545384 | 51546586 | 51545384 | ID=MS.gene38873 |
| chr8.4 | mRNA | 51545384 | 51546586 | 51545384 | ID=MS.gene38873.t1;Parent=MS.gene38873 |
| chr8.4 | exon | 51545449 | 51546586 | 51545449 | ID=MS.gene38873.t1.exon1;Parent=MS.gene38873.t1 |
| chr8.4 | CDS | 51545449 | 51546586 | 51545449 | ID=cds.MS.gene38873.t1;Parent=MS.gene38873.t1 |
| chr8.4 | exon | 51545384 | 51545418 | 51545384 | ID=MS.gene38873.t1.exon2;Parent=MS.gene38873.t1 |
| chr8.4 | CDS | 51545384 | 51545418 | 51545384 | ID=cds.MS.gene38873.t1;Parent=MS.gene38873.t1 |
| Gene Sequence |
| Protein sequence |
