Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38907.t1 | RHN40750.1 | 97.8 | 865 | 19 | 0 | 1 | 865 | 1 | 865 | 0.00E+00 | 1661.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38907.t1 | Q0WPK4 | 45.9 | 849 | 349 | 16 | 18 | 840 | 17 | 781 | 3.2e-185 | 650.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38907.t1 | A0A396GIE3 | 97.8 | 865 | 19 | 0 | 1 | 865 | 1 | 865 | 0.0e+00 | 1661.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051746 | MS.gene38907 | -0.802415 | 5.67E-49 | -1.69E-46 |
| MS.gene051748 | MS.gene38907 | -0.819555 | 1.09E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene38907 | -0.809352 | 1.97E-50 | -1.69E-46 |
| MS.gene052818 | MS.gene38907 | 0.8006 | 1.34E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38907.t1 | MTR_2g069530 | 69.676 | 864 | 241 | 11 | 19 | 865 | 21 | 880 | 0.0 | 1082 |
| MS.gene38907.t1 | MTR_2g069550 | 57.277 | 852 | 302 | 18 | 24 | 864 | 24 | 824 | 0.0 | 881 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38907.t1 | AT3G22270 | 45.169 | 859 | 356 | 21 | 25 | 863 | 17 | 780 | 0.0 | 639 |
| MS.gene38907.t1 | AT1G79090 | 45.327 | 856 | 352 | 22 | 14 | 840 | 13 | 781 | 0.0 | 632 |
| MS.gene38907.t1 | AT1G79090 | 45.327 | 856 | 352 | 22 | 14 | 840 | 13 | 781 | 0.0 | 632 |
| MS.gene38907.t1 | AT1G79090 | 45.327 | 856 | 352 | 22 | 14 | 840 | 13 | 781 | 0.0 | 632 |
| MS.gene38907.t1 | AT4G14990 | 44.419 | 860 | 359 | 23 | 29 | 863 | 20 | 785 | 0.0 | 594 |
| MS.gene38907.t1 | AT4G14990 | 44.015 | 802 | 332 | 20 | 87 | 863 | 1 | 710 | 0.0 | 554 |
Find 205 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCAAGATCTTAATCTTT+TGG | 0.196811 | 8.4:+50722928 | MS.gene38907:CDS |
| GAAGATGGTGATTAAATAAA+TGG | 0.199044 | 8.4:-50727229 | None:intergenic |
| GAAGACTTTGGTGCCAAAAT+TGG | 0.214292 | 8.4:-50726783 | None:intergenic |
| TTTGGTTGATCCATTGATTC+TGG | 0.218872 | 8.4:-50727034 | None:intergenic |
| CCAAGATGCGGCTCATATTT+TGG | 0.219528 | 8.4:-50726963 | None:intergenic |
| GCATCACAATATGCATTCTT+TGG | 0.223070 | 8.4:+50723607 | MS.gene38907:CDS |
| AATTGGGAAATCGTTCATTT+TGG | 0.228135 | 8.4:+50728326 | MS.gene38907:CDS |
| AACTGGCCTGTACTGTAATT+TGG | 0.236335 | 8.4:-50726852 | None:intergenic |
| TGAAGAAAGATCCTTCATTT+TGG | 0.246368 | 8.4:-50727528 | None:intergenic |
| GAGGGGAGCCAGTATTAAAT+TGG | 0.256524 | 8.4:-50726998 | None:intergenic |
| TTCCCAAAAGATTAAGATCT+TGG | 0.276626 | 8.4:-50722931 | None:intergenic |
| TTTCTTCAGGTTGATACTAT+AGG | 0.283219 | 8.4:+50727581 | MS.gene38907:CDS |
| GTGATAATAATCATCAATAT+AGG | 0.291904 | 8.4:-50727447 | None:intergenic |
| CCACCACTGGCAGAGGAGTT+TGG | 0.301095 | 8.4:-50727659 | None:intergenic |
| ACCATCCTCAATAGTGATTC+TGG | 0.307128 | 8.4:-50727735 | None:intergenic |
| CTTGTAGAAGATTGCACTTA+AGG | 0.308720 | 8.4:-50727796 | None:intergenic |
| TGATAATAATCATCAATATA+GGG | 0.310085 | 8.4:-50727446 | None:intergenic |
| GTTGAGAGACCCGATGTTTA+CGG | 0.327132 | 8.4:-50727295 | None:intergenic |
| AAGAAGGAGGAATGTCCTTT+TGG | 0.328682 | 8.4:+50727838 | MS.gene38907:CDS |
| TTCTTCAGGTTGATACTATA+GGG | 0.328913 | 8.4:+50727582 | MS.gene38907:CDS |
| CTCCAAGATACAACCCTGTT+TGG | 0.338076 | 8.4:-50727052 | None:intergenic |
| AACTTAGCCCAATTTAATAC+TGG | 0.355465 | 8.4:+50726990 | MS.gene38907:CDS |
| CAGCGCTCTTCGCCTGTGGC+TGG | 0.357870 | 8.4:+50728568 | MS.gene38907:CDS |
| TAAACATCGGGTCTCTCAAC+AGG | 0.358638 | 8.4:+50727298 | MS.gene38907:CDS |
| TGAAGCTCTTGTTGCTTGTC+AGG | 0.364348 | 8.4:-50726744 | None:intergenic |
| CTAGTGAACCTGTTCCTAAC+TGG | 0.377399 | 8.4:+50726601 | MS.gene38907:CDS |
| TGAGCCACACAGGTTTCTTC+AGG | 0.378458 | 8.4:+50727568 | MS.gene38907:CDS |
| CTTGCACGCAAGAGCTCAAC+AGG | 0.383233 | 8.4:-50728496 | None:intergenic |
| CGCTAGGAGCTTCCGTCCCT+TGG | 0.384276 | 8.4:-50727969 | None:intergenic |
| TTGAGAGACCCGATGTTTAC+GGG | 0.384740 | 8.4:-50727294 | None:intergenic |
| CAGTTGAACAAAATTGTTAG+TGG | 0.392481 | 8.4:+50725184 | MS.gene38907:intron |
| AGCTCCTAGCGAAGTATCTT+CGG | 0.394291 | 8.4:+50727981 | MS.gene38907:CDS |
| TGCAGCTGCCGTTGCTGCTC+AGG | 0.395760 | 8.4:-50726558 | None:intergenic |
| AAAGTTGTTCAATACAGTTC+AGG | 0.397294 | 8.4:+50727348 | MS.gene38907:CDS |
| AAGATGGTGATTAAATAAAT+GGG | 0.399467 | 8.4:-50727228 | None:intergenic |
| CATCACAATATGCATTCTTT+GGG | 0.404962 | 8.4:+50723608 | MS.gene38907:CDS |
| CAGTTGAACATTCCTTATGC+TGG | 0.408226 | 8.4:+50726870 | MS.gene38907:CDS |
| TCCTCCATTTCACACATAGA+AGG | 0.409307 | 8.4:+50726690 | MS.gene38907:CDS |
| TTTAATCACCATCTTCCGTC+TGG | 0.411992 | 8.4:+50727236 | MS.gene38907:CDS |
| GGAATGGATCTTGGTTCTCT+TGG | 0.415037 | 8.4:+50728151 | MS.gene38907:CDS |
| CTGGGTTGACGAAGGTTCTC+AGG | 0.418294 | 8.4:+50726452 | MS.gene38907:CDS |
| AACCAAACAGGGTTGTATCT+TGG | 0.421123 | 8.4:+50727050 | MS.gene38907:CDS |
| CGTTCCTTCTATGTGTGAAA+TGG | 0.422359 | 8.4:-50726694 | None:intergenic |
| ACCGCTACCGAACTTCTAAC+TGG | 0.428408 | 8.4:+50728280 | MS.gene38907:CDS |
| AAGATTAAGATCTTGGTTGT+TGG | 0.433495 | 8.4:-50722924 | None:intergenic |
| CAACAACTATACCATCATAA+TGG | 0.434197 | 8.4:+50727107 | MS.gene38907:CDS |
| AATCAATGGATCAACCAAAC+AGG | 0.438580 | 8.4:+50727038 | MS.gene38907:CDS |
| GTTGCCGAGGAAGTTGAGTT+GGG | 0.442334 | 8.4:+50723637 | MS.gene38907:CDS |
| TTCAGAGAAGTCCCTTGAGC+AGG | 0.448069 | 8.4:+50727697 | MS.gene38907:CDS |
| CCAAAATATGAGCCGCATCT+TGG | 0.448655 | 8.4:+50726963 | MS.gene38907:CDS |
| TGATCAAACCAGTTAGGAAC+AGG | 0.452768 | 8.4:-50726609 | None:intergenic |
| AAGCCAGCTGACGCTTGAAC+AGG | 0.455440 | 8.4:-50727188 | None:intergenic |
| ATTCAATTCTGCGTCACACT+TGG | 0.457252 | 8.4:+50726935 | MS.gene38907:CDS |
| CAGCATAAGGAATGTTCAAC+TGG | 0.458036 | 8.4:-50726869 | None:intergenic |
| TGTGTCCATTCTTTCCTAGC+GGG | 0.459607 | 8.4:-50727892 | None:intergenic |
| CAGATTCCTCTGCTTCTGAA+TGG | 0.459616 | 8.4:+50726406 | MS.gene38907:intron |
| TGCTGCTAAAGTAGTTAGTA+AGG | 0.462439 | 8.4:+50728468 | MS.gene38907:CDS |
| TATCTTCGGTTGCTTGATCC+TGG | 0.463629 | 8.4:+50727995 | MS.gene38907:CDS |
| TTGAGAACCAGTTAGAAGTT+CGG | 0.463987 | 8.4:-50728287 | None:intergenic |
| CTCGGAAGTCCTGCTGGAGA+TGG | 0.466408 | 8.4:+50728226 | MS.gene38907:CDS |
| GCTGGATTTAACAGCTATGC+TGG | 0.469530 | 8.4:+50728586 | MS.gene38907:CDS |
| TGCAGGAGTTATCGGTGATC+GGG | 0.474133 | 8.4:+50725216 | MS.gene38907:CDS |
| AGTTGAACATTCCTTATGCT+GGG | 0.475705 | 8.4:+50726871 | MS.gene38907:CDS |
| GAACAAAATGTGGCTGCGAT+TGG | 0.476470 | 8.4:+50728439 | MS.gene38907:CDS |
| AGAGGGATGATGTTCCCTAC+TGG | 0.478742 | 8.4:+50726433 | MS.gene38907:CDS |
| TATCCTGTTCAAGCGTCAGC+TGG | 0.480209 | 8.4:+50727185 | MS.gene38907:CDS |
| GCGTCAGCTGGCTTAATGTC+AGG | 0.483312 | 8.4:+50727197 | MS.gene38907:CDS |
| TGGTGCTTGTCTTGCAGCAG+TGG | 0.485257 | 8.4:+50728171 | MS.gene38907:CDS |
| CGCTCAGCGCTCTTCGCCTG+TGG | 0.486337 | 8.4:+50728564 | MS.gene38907:CDS |
| ATAATCGAATCCAGAATCAA+TGG | 0.492251 | 8.4:+50727024 | MS.gene38907:CDS |
| CGAACAATGGCTCCTGCTCA+AGG | 0.493113 | 8.4:-50727709 | None:intergenic |
| CTCAGAGCCACCACTGGCAG+AGG | 0.494329 | 8.4:-50727666 | None:intergenic |
| CACTAGAGCGATGTTGGAGT+TGG | 0.494465 | 8.4:-50726584 | None:intergenic |
| CAGGTTCACTAGAGCGATGT+TGG | 0.494487 | 8.4:-50726590 | None:intergenic |
| CATTGCAGACGGATGATGTA+AGG | 0.494656 | 8.4:+50724280 | MS.gene38907:intron |
| CTGCCGTTGCTGCTCAGGAT+AGG | 0.495545 | 8.4:-50726553 | None:intergenic |
| AAAACCAACCCGTAAACATC+GGG | 0.500403 | 8.4:+50727286 | MS.gene38907:CDS |
| TTGTCTATTCTCTCTAACGA+TGG | 0.502571 | 8.4:-50727264 | None:intergenic |
| ACAACTAGCATCTATTTCCA+AGG | 0.506517 | 8.4:+50727952 | MS.gene38907:CDS |
| TGTATCGAAGGAATGGATCT+TGG | 0.508446 | 8.4:+50728142 | MS.gene38907:CDS |
| CTCTGCTGCTGCTGAATCAG+AGG | 0.508948 | 8.4:-50728086 | None:intergenic |
| AACTGTTGATCAAACCAGTT+AGG | 0.511367 | 8.4:-50726615 | None:intergenic |
| TGGATGATCCAGACGGAAGA+TGG | 0.513797 | 8.4:-50727244 | None:intergenic |
| ATAGGAAGACGTTCTGTACA+AGG | 0.514890 | 8.4:-50726535 | None:intergenic |
| TAAGAAGTAAATGAAGACTT+TGG | 0.515235 | 8.4:-50726795 | None:intergenic |
| AAATATGAGCCGCATCTTGG+TGG | 0.515281 | 8.4:+50726966 | MS.gene38907:CDS |
| TGTTGCCGAGGAAGTTGAGT+TGG | 0.515351 | 8.4:+50723636 | MS.gene38907:CDS |
| TAAGAAGACAAGGTCATCCT+TGG | 0.516956 | 8.4:-50727930 | None:intergenic |
| AGGGGAGCCAGTATTAAATT+GGG | 0.517070 | 8.4:-50726997 | None:intergenic |
| GTGCAGGAGTTATCGGTGAT+CGG | 0.518077 | 8.4:+50725215 | MS.gene38907:CDS |
| GCTGCAACATATTATTCAGA+AGG | 0.518499 | 8.4:-50727085 | None:intergenic |
| TTCAATTCTGCGTCACACTT+GGG | 0.523618 | 8.4:+50726936 | MS.gene38907:CDS |
| CTAGTAATAACTTTCTCTGC+CGG | 0.526180 | 8.4:-50728537 | None:intergenic |
| TAACTTTCTCTGCCGGTCGT+TGG | 0.528752 | 8.4:-50728530 | None:intergenic |
| CCAAACTCCTCTGCCAGTGG+TGG | 0.529316 | 8.4:+50727659 | MS.gene38907:CDS |
| GAGGGATGATGTTCCCTACT+GGG | 0.533048 | 8.4:+50726434 | MS.gene38907:CDS |
| TCTGGATTCGATTATTGAGA+GGG | 0.533592 | 8.4:-50727016 | None:intergenic |
| CCAGAGTATCATGCAGTCAC+TGG | 0.534028 | 8.4:+50728405 | MS.gene38907:CDS |
| AGAGGGCGAGGCTGACGAAT+GGG | 0.534806 | 8.4:-50727620 | None:intergenic |
| GGAAAGAATGGACACAAAGC+TGG | 0.534908 | 8.4:+50727899 | MS.gene38907:CDS |
| AAACCTGTGTGGCTCAGTAT+TGG | 0.535430 | 8.4:-50727561 | None:intergenic |
| GTGGACCCGCTAGGAAAGAA+TGG | 0.535796 | 8.4:+50727887 | MS.gene38907:CDS |
| CTCTGCCGGTCGTTGGTGTG+AGG | 0.535838 | 8.4:-50728523 | None:intergenic |
| TTGTCAGTGTATCGAAGGAA+TGG | 0.536739 | 8.4:+50728135 | MS.gene38907:CDS |
| TGCTGCTGTTGTTGCAACTG+AGG | 0.538715 | 8.4:-50727152 | None:intergenic |
| CCAGTGACTGCATGATACTC+TGG | 0.541700 | 8.4:-50728405 | None:intergenic |
| TATTCATGCAATACTTTGTG+AGG | 0.544965 | 8.4:-50728378 | None:intergenic |
| GTCTTCCTCACACCAACGAC+CGG | 0.545146 | 8.4:+50728518 | MS.gene38907:CDS |
| AAGTGCAATCTTCTACAAGA+TGG | 0.555960 | 8.4:+50727800 | MS.gene38907:CDS |
| AAGAGGGCGAGGCTGACGAA+TGG | 0.556679 | 8.4:-50727621 | None:intergenic |
| TCCTCGTTAAACGTAACAGA+AGG | 0.556978 | 8.4:-50723688 | None:intergenic |
| CTTCATCTCGTGGACCCGCT+AGG | 0.557773 | 8.4:+50727878 | MS.gene38907:CDS |
| ATCCGCACAAGCTCACTACC+AGG | 0.557985 | 8.4:-50728013 | None:intergenic |
| CATCTCCAGCAGGACTTCCG+AGG | 0.559113 | 8.4:-50728225 | None:intergenic |
| GCCGAGGAAGTTGAGTTGGG+GGG | 0.559712 | 8.4:+50723640 | MS.gene38907:CDS |
| CCTCCAAACTCCTCTGCCAG+TGG | 0.560112 | 8.4:+50727656 | MS.gene38907:CDS |
| GTGTGGCTCAGTATTGGCAC+GGG | 0.560334 | 8.4:-50727555 | None:intergenic |
| CGCAGCCAGAATCACTATTG+AGG | 0.560701 | 8.4:+50727730 | MS.gene38907:CDS |
| GAGACCCGATGTTTACGGGT+TGG | 0.561012 | 8.4:-50727290 | None:intergenic |
| TCTTCTCCAAATTACAGTAC+AGG | 0.561121 | 8.4:+50726846 | MS.gene38907:CDS |
| ATCTCCAGCAGGACTTCCGA+GGG | 0.562988 | 8.4:-50728224 | None:intergenic |
| AATTCTGCGTCACACTTGGG+TGG | 0.563960 | 8.4:+50726939 | MS.gene38907:CDS |
| ATGCAGTCACTGGTTATACA+AGG | 0.564011 | 8.4:+50728415 | MS.gene38907:CDS |
| CCCTTCTGTTACGTTTAACG+AGG | 0.565267 | 8.4:+50723687 | MS.gene38907:CDS |
| ACCAGTTAGAAGTTCGGTAG+CGG | 0.568400 | 8.4:-50728281 | None:intergenic |
| GATAATAATCATCAATATAG+GGG | 0.569599 | 8.4:-50727445 | None:intergenic |
| GTGAAACTGTTGATGATGAC+AGG | 0.569903 | 8.4:+50726646 | MS.gene38907:CDS |
| TGTGTGGCTCAGTATTGGCA+CGG | 0.570357 | 8.4:-50727556 | None:intergenic |
| GACTGCCAGTGATCTTGCTA+TGG | 0.571406 | 8.4:+50728108 | MS.gene38907:CDS |
| GCTTGTGCGGATTGTCTGCA+TGG | 0.572543 | 8.4:+50728024 | MS.gene38907:CDS |
| TAGTAATAGTCATGTGAACT+CGG | 0.573104 | 8.4:+50728615 | MS.gene38907:CDS |
| TGCTTCTGAATGGTCACAGA+GGG | 0.573238 | 8.4:+50726416 | MS.gene38907:CDS |
| TCCTTCTATGTGTGAAATGG+AGG | 0.574872 | 8.4:-50726691 | None:intergenic |
| GTTGTTTGTCAGTGTATCGA+AGG | 0.578563 | 8.4:+50728130 | MS.gene38907:CDS |
| TCAGCTTCAAGAAGAGGGCG+AGG | 0.578977 | 8.4:-50727632 | None:intergenic |
| TTCTGGATTCGATTATTGAG+AGG | 0.579609 | 8.4:-50727017 | None:intergenic |
| TTCTGTTACGTTTAACGAGG+AGG | 0.579945 | 8.4:+50723690 | MS.gene38907:CDS |
| ATGTTGCTAGTCCTTCCAAA+AGG | 0.580287 | 8.4:-50727853 | None:intergenic |
| GGAGGATCAGCTTCAAGAAG+AGG | 0.581213 | 8.4:-50727638 | None:intergenic |
| CGAGAACAGATACTAAAACA+AGG | 0.582603 | 8.4:-50728255 | None:intergenic |
| AATTTAAATTTAGCCCCAGA+AGG | 0.584122 | 8.4:-50727491 | None:intergenic |
| CTGGATTTAACAGCTATGCT+GGG | 0.584302 | 8.4:+50728587 | MS.gene38907:CDS |
| AGAACCTTCGTCAACCCAGT+AGG | 0.585118 | 8.4:-50726448 | None:intergenic |
| TTGCCGAGGAAGTTGAGTTG+GGG | 0.585256 | 8.4:+50723638 | MS.gene38907:CDS |
| TATGAAGATGTTCTATGCAA+GGG | 0.586515 | 8.4:-50726720 | None:intergenic |
| TATACAAGGGGAACAAAATG+TGG | 0.589541 | 8.4:+50728429 | MS.gene38907:CDS |
| GTGATTCTGGCTGCGAACAA+TGG | 0.590298 | 8.4:-50727722 | None:intergenic |
| GAGGATCAGCTTCAAGAAGA+GGG | 0.592242 | 8.4:-50727637 | None:intergenic |
| TGCCGAGGAAGTTGAGTTGG+GGG | 0.592626 | 8.4:+50723639 | MS.gene38907:CDS |
| AACAACCATAGCAAGATCAC+TGG | 0.593312 | 8.4:-50728113 | None:intergenic |
| AATTCGCTCAGAGCCACCAC+TGG | 0.594495 | 8.4:-50727672 | None:intergenic |
| GAACCTTCGTCAACCCAGTA+GGG | 0.595113 | 8.4:-50726447 | None:intergenic |
| ATATGAAGATGTTCTATGCA+AGG | 0.596969 | 8.4:-50726721 | None:intergenic |
| TTGAACATTCCTTATGCTGG+GGG | 0.597694 | 8.4:+50726873 | MS.gene38907:CDS |
| TCTGCTGCTGCTGAATCAGA+GGG | 0.597695 | 8.4:-50728085 | None:intergenic |
| GAGACACTGATCCATTATGA+TGG | 0.598684 | 8.4:-50727118 | None:intergenic |
| GAACAATGGCTCCTGCTCAA+GGG | 0.600139 | 8.4:-50727708 | None:intergenic |
| GCCAGAATCACTATTGAGGA+TGG | 0.600876 | 8.4:+50727734 | MS.gene38907:CDS |
| CTCCAGCAGGACTTCCGAGG+GGG | 0.602256 | 8.4:-50728222 | None:intergenic |
| GAGAACAGATACTAAAACAA+GGG | 0.602558 | 8.4:-50728254 | None:intergenic |
| AGCAACATCACTTCATCTCG+TGG | 0.604594 | 8.4:+50727868 | MS.gene38907:CDS |
| AGGGAAGCACCATCTCCAGC+AGG | 0.606600 | 8.4:-50728235 | None:intergenic |
| TGCAATCTTCTACAAGATGG+TGG | 0.606608 | 8.4:+50727803 | MS.gene38907:CDS |
| CAAAGCTGGTCTTACTGCCA+AGG | 0.607057 | 8.4:+50727913 | MS.gene38907:CDS |
| TAGCTGTTAAATCCAGCCAC+AGG | 0.608075 | 8.4:-50728580 | None:intergenic |
| CTGTGACCATTCAGAAGCAG+AGG | 0.609822 | 8.4:-50726412 | None:intergenic |
| GTGGAACTCAATTCACAAGA+AGG | 0.610553 | 8.4:+50727822 | MS.gene38907:CDS |
| AACAGAAGAATGTGGATGTG+AGG | 0.610554 | 8.4:-50726490 | None:intergenic |
| GTTGAACATTCCTTATGCTG+GGG | 0.612073 | 8.4:+50726872 | MS.gene38907:CDS |
| GCGCAGAGGAGGAGGCTCTG+AGG | 0.612695 | 8.4:-50728200 | None:intergenic |
| GTTGACGAAGGTTCTCAGGA+TGG | 0.615842 | 8.4:+50726456 | MS.gene38907:CDS |
| TGCAACTGAGGCAGTAAGTG+AGG | 0.616508 | 8.4:-50727140 | None:intergenic |
| CTTCCTATCCTGAGCAGCAA+CGG | 0.616800 | 8.4:+50726550 | MS.gene38907:CDS |
| ATCCTGGTAGTGAGCTTGTG+CGG | 0.616887 | 8.4:+50728011 | MS.gene38907:CDS |
| ATGCTAGTTGTAAGAAGACA+AGG | 0.617979 | 8.4:-50727940 | None:intergenic |
| CAACTAGCATCTATTTCCAA+GGG | 0.618588 | 8.4:+50727953 | MS.gene38907:CDS |
| TTGTGTCCATTCTTTCCTAG+CGG | 0.620857 | 8.4:-50727893 | None:intergenic |
| TGCAGTCACTGGTTATACAA+GGG | 0.621051 | 8.4:+50728416 | MS.gene38907:CDS |
| ATGTGTGAAATGGAGGAATG+TGG | 0.622182 | 8.4:-50726684 | None:intergenic |
| CTGGATTCGATTATTGAGAG+GGG | 0.625199 | 8.4:-50727015 | None:intergenic |
| CCACTGGCAGAGGAGTTTGG+AGG | 0.626147 | 8.4:-50727656 | None:intergenic |
| CTGTTGATGATGACAGGAGA+TGG | 0.626700 | 8.4:+50726652 | MS.gene38907:CDS |
| GTTCCCTACTGGGTTGACGA+AGG | 0.630649 | 8.4:+50726444 | MS.gene38907:CDS |
| GCAGTCACTGGTTATACAAG+GGG | 0.630832 | 8.4:+50728417 | MS.gene38907:CDS |
| TAGCATCTATTTCCAAGGGA+CGG | 0.631807 | 8.4:+50727957 | MS.gene38907:CDS |
| TTCAGGTTGATACTATAGGG+AGG | 0.634635 | 8.4:+50727585 | MS.gene38907:CDS |
| AAACATCGGGTCTCTCAACA+GGG | 0.634864 | 8.4:+50727299 | MS.gene38907:CDS |
| GCAACCGAAGATACTTCGCT+AGG | 0.636428 | 8.4:-50727985 | None:intergenic |
| CCGAGGAAGTTGAGTTGGGG+GGG | 0.641319 | 8.4:+50723641 | MS.gene38907:CDS |
| ATCAATGGATCAACCAAACA+GGG | 0.642698 | 8.4:+50727039 | MS.gene38907:CDS |
| GCTAAGTTTCCACCAAGATG+CGG | 0.646884 | 8.4:-50726975 | None:intergenic |
| AGATGGTGATTAAATAAATG+GGG | 0.649809 | 8.4:-50727227 | None:intergenic |
| CTTTGGGAAAGATGTTGCCG+AGG | 0.650886 | 8.4:+50723624 | MS.gene38907:CDS |
| CCTCGTTAAACGTAACAGAA+GGG | 0.660223 | 8.4:-50723687 | None:intergenic |
| TAGGAAGACGTTCTGTACAA+GGG | 0.665058 | 8.4:-50726534 | None:intergenic |
| GAACTCAATTCACAAGAAGG+AGG | 0.669765 | 8.4:+50727825 | MS.gene38907:CDS |
| CTAACGATGGATGATCCAGA+CGG | 0.670278 | 8.4:-50727251 | None:intergenic |
| GTGCCAATACTGAGCCACAC+AGG | 0.671643 | 8.4:+50727558 | MS.gene38907:CDS |
| ATATGAGCAACAGAAGAATG+TGG | 0.697566 | 8.4:-50726498 | None:intergenic |
| CTGCTTCTGAATGGTCACAG+AGG | 0.709939 | 8.4:+50726415 | MS.gene38907:CDS |
| TCTCCAGCAGGACTTCCGAG+GGG | 0.719904 | 8.4:-50728223 | None:intergenic |
| CTGCTGCTGCTGAATCAGAG+GGG | 0.723332 | 8.4:-50728084 | None:intergenic |
| GTTCTCAGGATGGAAAACGA+TGG | 0.726895 | 8.4:+50726466 | MS.gene38907:CDS |
| GATCAATATCATCTACATCG+AGG | 0.731586 | 8.4:-50727769 | None:intergenic |
| TCAACCTGAAGAAACCTGTG+TGG | 0.743908 | 8.4:-50727572 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTCAAATATAACATT+TGG | - | chr8.4:50724075-50724094 | None:intergenic | 10.0% |
| !!! | ATAATTGTATTTATTTTGAT+TGG | + | chr8.4:50723217-50723236 | MS.gene38907:intron | 10.0% |
| !!! | TTATAAAGTAAGAATTTTTA+GGG | - | chr8.4:50725537-50725556 | None:intergenic | 10.0% |
| !! | ATAAATAATTAAGTGAAGAA+TGG | - | chr8.4:50726367-50726386 | None:intergenic | 15.0% |
| !! | GAAATTAGAAAAAAAAAATG+TGG | - | chr8.4:50723760-50723779 | None:intergenic | 15.0% |
| !! | TGATAATAATCATCAATATA+GGG | - | chr8.4:50727449-50727468 | None:intergenic | 15.0% |
| !! | TTAATTATAGATTAGTATGT+TGG | + | chr8.4:50724405-50724424 | MS.gene38907:intron | 15.0% |
| !!! | AAATTCTTAATATGTCATTT+TGG | + | chr8.4:50725634-50725653 | MS.gene38907:intron | 15.0% |
| !!! | AAATTTTGAGAATAAACAAT+TGG | - | chr8.4:50724964-50724983 | None:intergenic | 15.0% |
| !!! | AATTCTTAATATGTCATTTT+GGG | + | chr8.4:50725635-50725654 | MS.gene38907:intron | 15.0% |
| !!! | ATTAACAATGAATTTTAAGT+AGG | - | chr8.4:50725481-50725500 | None:intergenic | 15.0% |
| !!! | ATTTATCGAGTTTTTTTTTT+TGG | + | chr8.4:50725766-50725785 | MS.gene38907:intron | 15.0% |
| !!! | GTTATAAAGTAAGAATTTTT+AGG | - | chr8.4:50725538-50725557 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTAGTTAAGAGA+AGG | - | chr8.4:50724451-50724470 | None:intergenic | 15.0% |
| !!! | TGTTATATTTGAATTTTATC+TGG | + | chr8.4:50724077-50724096 | MS.gene38907:intron | 15.0% |
| !!! | TTATTTGTTAGATAACATTT+TGG | + | chr8.4:50726219-50726238 | MS.gene38907:intron | 15.0% |
| !!! | TTCTAATTTCTAATTTTATG+TGG | + | chr8.4:50723770-50723789 | MS.gene38907:intron | 15.0% |
| !!! | TTTTGTAGTTTTTACTTTAT+GGG | + | chr8.4:50722994-50723013 | MS.gene38907:intron | 15.0% |
| !!! | TTTTTGTAGTTTTTACTTTA+TGG | + | chr8.4:50722993-50723012 | MS.gene38907:intron | 15.0% |
| !! | AAATAGATAGGATAGAAATA+AGG | + | chr8.4:50724504-50724523 | MS.gene38907:intron | 20.0% |
| !! | AAGATGGTGATTAAATAAAT+GGG | - | chr8.4:50727231-50727250 | None:intergenic | 20.0% |
| !! | AATGTGTTAAAAACTACTTT+GGG | + | chr8.4:50725381-50725400 | MS.gene38907:intron | 20.0% |
| !! | ATTAAAGTAAAGGGAAATAA+GGG | - | chr8.4:50725070-50725089 | None:intergenic | 20.0% |
| !! | GATAATAATCATCAATATAG+GGG | - | chr8.4:50727448-50727467 | None:intergenic | 20.0% |
| !! | GTGATAATAATCATCAATAT+AGG | - | chr8.4:50727450-50727469 | None:intergenic | 20.0% |
| !! | TAAAAAATAATCTGTAGTTG+TGG | + | chr8.4:50725725-50725744 | MS.gene38907:intron | 20.0% |
| !! | TAAAATGAAGAAAACATACA+CGG | - | chr8.4:50723845-50723864 | None:intergenic | 20.0% |
| !! | TAATGTGTTAAAAACTACTT+TGG | + | chr8.4:50725380-50725399 | MS.gene38907:intron | 20.0% |
| !! | TAGAAAAAAAAAATGTGGTT+AGG | - | chr8.4:50723755-50723774 | None:intergenic | 20.0% |
| !! | TATCAAATTTCAAAATGTTG+AGG | - | chr8.4:50724121-50724140 | None:intergenic | 20.0% |
| !! | TCTAAGTGAAATTTGTATTT+AGG | + | chr8.4:50726265-50726284 | MS.gene38907:intron | 20.0% |
| !! | TGTTTAGATATCTGTTTAAT+AGG | - | chr8.4:50724554-50724573 | None:intergenic | 20.0% |
| !! | TTAATAAAATCACAAGAATC+TGG | - | chr8.4:50725699-50725718 | None:intergenic | 20.0% |
| !!! | CATTATTTTTCTTGACTTAT+TGG | + | chr8.4:50723495-50723514 | MS.gene38907:intron | 20.0% |
| !!! | CGTCATTTAAGATTTTTATT+CGG | + | chr8.4:50728055-50728074 | MS.gene38907:CDS | 20.0% |
| !!! | TTACTATAAAACAGTGATTT+TGG | + | chr8.4:50723299-50723318 | MS.gene38907:intron | 20.0% |
| !!! | TTTGTAGTTTTTACTTTATG+GGG | + | chr8.4:50722995-50723014 | MS.gene38907:intron | 20.0% |
| !!! | TTTTAGTAACCATGATAATA+TGG | + | chr8.4:50726032-50726051 | MS.gene38907:intron | 20.0% |
| ! | AACCATAATAATATTTCGTC+TGG | + | chr8.4:50726079-50726098 | MS.gene38907:intron | 25.0% |
| ! | ACCATAATAATATTTCGTCT+GGG | + | chr8.4:50726080-50726099 | MS.gene38907:intron | 25.0% |
| ! | AGATGGTGATTAAATAAATG+GGG | - | chr8.4:50727230-50727249 | None:intergenic | 25.0% |
| ! | ATAGATGTTACTGCATTATA+GGG | + | chr8.4:50723258-50723277 | MS.gene38907:intron | 25.0% |
| ! | ATCAATCAACAGTAAGTTAT+TGG | - | chr8.4:50724708-50724727 | None:intergenic | 25.0% |
| ! | ATGTGTTAAAAACTACTTTG+GGG | + | chr8.4:50725382-50725401 | MS.gene38907:intron | 25.0% |
| ! | ATTCATCAAAATCAACAGTT+GGG | - | chr8.4:50723915-50723934 | None:intergenic | 25.0% |
| ! | CATTAAAGTAAAGGGAAATA+AGG | - | chr8.4:50725071-50725090 | None:intergenic | 25.0% |
| ! | GAAGATGGTGATTAAATAAA+TGG | - | chr8.4:50727232-50727251 | None:intergenic | 25.0% |
| ! | TAAGAAGTAAATGAAGACTT+TGG | - | chr8.4:50726798-50726817 | None:intergenic | 25.0% |
| ! | TATAGATGTTACTGCATTAT+AGG | + | chr8.4:50723257-50723276 | MS.gene38907:intron | 25.0% |
| ! | TCAAATTATCATCTATGTTG+AGG | + | chr8.4:50723413-50723432 | MS.gene38907:intron | 25.0% |
| ! | TTCCAGAACATTAAAGTAAA+GGG | - | chr8.4:50725079-50725098 | None:intergenic | 25.0% |
| ! | TTTCCAGAACATTAAAGTAA+AGG | - | chr8.4:50725080-50725099 | None:intergenic | 25.0% |
| !! | AAACAGAATATAACGTTTTC+TGG | - | chr8.4:50724840-50724859 | None:intergenic | 25.0% |
| !! | AACAGTGATTTTGGATTAAT+AGG | + | chr8.4:50723308-50723327 | MS.gene38907:intron | 25.0% |
| !! | AACCAAGATCTTAATCTTTT+GGG | + | chr8.4:50722929-50722948 | MS.gene38907:CDS | 25.0% |
| !! | AACTTACTGTTGATTGATAA+GGG | + | chr8.4:50724710-50724729 | MS.gene38907:intron | 25.0% |
| !! | ACAGTGATTTTGGATTAATA+GGG | + | chr8.4:50723309-50723328 | MS.gene38907:intron | 25.0% |
| !! | AGTAGGTTTTCAGAAAATAA+TGG | - | chr8.4:50725464-50725483 | None:intergenic | 25.0% |
| !! | ATTTTTCTGACTCTTTCTTT+CGG | - | chr8.4:50725970-50725989 | None:intergenic | 25.0% |
| !! | TAACTTACTGTTGATTGATA+AGG | + | chr8.4:50724709-50724728 | MS.gene38907:intron | 25.0% |
| !!! | AGTTTTAATGGTTTTACAAG+TGG | + | chr8.4:50725930-50725949 | MS.gene38907:intron | 25.0% |
| !!! | ATGTTGGTGATTTTTTTTCT+TGG | + | chr8.4:50724421-50724440 | MS.gene38907:intron | 25.0% |
| !!! | TATAAATGCAGTTTTGATAG+TGG | + | chr8.4:50724636-50724655 | MS.gene38907:intron | 25.0% |
| !!! | TGTTGGTGATTTTTTTTCTT+GGG | + | chr8.4:50724422-50724441 | MS.gene38907:intron | 25.0% |
| !!! | TGTTGTTTGTTGTTTGATTA+GGG | + | chr8.4:50723075-50723094 | MS.gene38907:intron | 25.0% |
| !!! | TTGTTGTTTGTTGTTTGATT+AGG | + | chr8.4:50723074-50723093 | MS.gene38907:intron | 25.0% |
| !!! | TTTTGATTATTGTTCTTGCA+TGG | + | chr8.4:50723136-50723155 | MS.gene38907:intron | 25.0% |
| !!! | TTTTTTGAGTGAACCAATTT+TGG | + | chr8.4:50726770-50726789 | MS.gene38907:CDS | 25.0% |
| AAAGCATATTTCCAAAGCAT+TGG | + | chr8.4:50724010-50724029 | MS.gene38907:intron | 30.0% | |
| AAAGTTGTTCAATACAGTTC+AGG | + | chr8.4:50727348-50727367 | MS.gene38907:CDS | 30.0% | |
| AACCATGATAATATGGTAGA+AGG | + | chr8.4:50726039-50726058 | MS.gene38907:intron | 30.0% | |
| AACTTAGCCCAATTTAATAC+TGG | + | chr8.4:50726990-50727009 | MS.gene38907:CDS | 30.0% | |
| AAGATTAAGATCTTGGTTGT+TGG | - | chr8.4:50722927-50722946 | None:intergenic | 30.0% | |
| AATTTAAATTTAGCCCCAGA+AGG | - | chr8.4:50727494-50727513 | None:intergenic | 30.0% | |
| ACCATGATAATATGGTAGAA+GGG | + | chr8.4:50726040-50726059 | MS.gene38907:intron | 30.0% | |
| AGAAAGAGTCAGAAAAATGT+TGG | + | chr8.4:50725972-50725991 | MS.gene38907:intron | 30.0% | |
| AGTGGTAAACTTGATTGATA+AGG | + | chr8.4:50724654-50724673 | MS.gene38907:intron | 30.0% | |
| ATAATCGAATCCAGAATCAA+TGG | + | chr8.4:50727024-50727043 | MS.gene38907:CDS | 30.0% | |
| ATATGAAGATGTTCTATGCA+AGG | - | chr8.4:50726724-50726743 | None:intergenic | 30.0% | |
| ATTACTCATGTTTGTCCTTT+AGG | - | chr8.4:50724203-50724222 | None:intergenic | 30.0% | |
| CAACAACTATACCATCATAA+TGG | + | chr8.4:50727107-50727126 | MS.gene38907:CDS | 30.0% | |
| CAGTTGAACAAAATTGTTAG+TGG | + | chr8.4:50725184-50725203 | MS.gene38907:intron | 30.0% | |
| CATCACAATATGCATTCTTT+GGG | + | chr8.4:50723608-50723627 | MS.gene38907:CDS | 30.0% | |
| GAAAGAGTCAGAAAAATGTT+GGG | + | chr8.4:50725973-50725992 | MS.gene38907:intron | 30.0% | |
| GAGAACAGATACTAAAACAA+GGG | - | chr8.4:50728257-50728276 | None:intergenic | 30.0% | |
| GATTCATCAAAATCAACAGT+TGG | - | chr8.4:50723916-50723935 | None:intergenic | 30.0% | |
| GATTGATCAAGTATAACAGT+TGG | - | chr8.4:50723968-50723987 | None:intergenic | 30.0% | |
| TAATTATCCATTAACCTGAC+TGG | - | chr8.4:50726202-50726221 | None:intergenic | 30.0% | |
| TAGAAATAAGGTACAGTTAG+TGG | + | chr8.4:50724516-50724535 | MS.gene38907:intron | 30.0% | |
| TAGTAATAGTCATGTGAACT+CGG | + | chr8.4:50728615-50728634 | MS.gene38907:CDS | 30.0% | |
| TATGAAGATGTTCTATGCAA+GGG | - | chr8.4:50726723-50726742 | None:intergenic | 30.0% | |
| TATTCATGCAATACTTTGTG+AGG | - | chr8.4:50728381-50728400 | None:intergenic | 30.0% | |
| TCAATAACTGCTGCAAATTA+TGG | - | chr8.4:50724043-50724062 | None:intergenic | 30.0% | |
| TCCCAGACGAAATATTATTA+TGG | - | chr8.4:50726084-50726103 | None:intergenic | 30.0% | |
| TTATGAATGACCACAAAACA+CGG | - | chr8.4:50726112-50726131 | None:intergenic | 30.0% | |
| TTCATCAAAATCAACAGTTG+GGG | - | chr8.4:50723914-50723933 | None:intergenic | 30.0% | |
| TTCCCAAAAGATTAAGATCT+TGG | - | chr8.4:50722934-50722953 | None:intergenic | 30.0% | |
| TTCCCTTTACTTTAATGTTC+TGG | + | chr8.4:50725074-50725093 | MS.gene38907:intron | 30.0% | |
| ! | AATTGGGAAATCGTTCATTT+TGG | + | chr8.4:50728326-50728345 | MS.gene38907:CDS | 30.0% |
| ! | ATTATATCCCCTTTTATGCA+TGG | + | chr8.4:50726300-50726319 | MS.gene38907:intron | 30.0% |
| ! | ATTTTCTGTTGTTATGCAGA+TGG | + | chr8.4:50723571-50723590 | MS.gene38907:intron | 30.0% |
| ! | CAACCAAGATCTTAATCTTT+TGG | + | chr8.4:50722928-50722947 | MS.gene38907:CDS | 30.0% |
| ! | CATTATAGGGTTCTTGATTT+TGG | + | chr8.4:50723271-50723290 | MS.gene38907:intron | 30.0% |
| ! | CTCAAAATGCTTGAGATTTT+TGG | + | chr8.4:50724378-50724397 | MS.gene38907:intron | 30.0% |
| ! | GTTGTGGTTTCTTCTTTTTA+TGG | + | chr8.4:50725741-50725760 | MS.gene38907:intron | 30.0% |
| ! | TGAAGAAAGATCCTTCATTT+TGG | - | chr8.4:50727531-50727550 | None:intergenic | 30.0% |
| ! | TTGATGGGCAAAATTATGAA+CGG | - | chr8.4:50723941-50723960 | None:intergenic | 30.0% |
| !! | AAAACTTGTTGAAATCACTG+AGG | - | chr8.4:50726004-50726023 | None:intergenic | 30.0% |
| !! | AATGCTTTGGAAATATGCTT+TGG | - | chr8.4:50724011-50724030 | None:intergenic | 30.0% |
| !! | ATGCTTTGGAAATATGCTTT+GGG | - | chr8.4:50724010-50724029 | None:intergenic | 30.0% |
| !! | ATTACATTTTTCAGCACTTG+AGG | + | chr8.4:50725340-50725359 | MS.gene38907:intron | 30.0% |
| !! | CTTTTGGGAAATCTTACTAA+AGG | + | chr8.4:50722944-50722963 | MS.gene38907:CDS | 30.0% |
| !! | GATTTCAACAAGTTTTGTCT+TGG | + | chr8.4:50726008-50726027 | MS.gene38907:intron | 30.0% |
| !! | TTCTTCAGGTTGATACTATA+GGG | + | chr8.4:50727582-50727601 | MS.gene38907:CDS | 30.0% |
| !! | TTTCTTCAGGTTGATACTAT+AGG | + | chr8.4:50727581-50727600 | MS.gene38907:CDS | 30.0% |
| !!! | AAAGATCCTTCATTTTGGTT+GGG | - | chr8.4:50727526-50727545 | None:intergenic | 30.0% |
| !!! | GTTTTTTCACAATGAAGAAG+AGG | + | chr8.4:50723714-50723733 | MS.gene38907:CDS | 30.0% |
| AAAAACCAACCCGTAAACAT+CGG | + | chr8.4:50727285-50727304 | MS.gene38907:CDS | 35.0% | |
| AAATAAGGTACAGTTAGTGG+AGG | + | chr8.4:50724519-50724538 | MS.gene38907:intron | 35.0% | |
| AACTGTTGATCAAACCAGTT+AGG | - | chr8.4:50726618-50726637 | None:intergenic | 35.0% | |
| AAGTGCAATCTTCTACAAGA+TGG | + | chr8.4:50727800-50727819 | MS.gene38907:CDS | 35.0% | |
| AATCAATGGATCAACCAAAC+AGG | + | chr8.4:50727038-50727057 | MS.gene38907:CDS | 35.0% | |
| ACAACTAGCATCTATTTCCA+AGG | + | chr8.4:50727952-50727971 | MS.gene38907:CDS | 35.0% | |
| AGCAAGATTCCATGCATAAA+AGG | - | chr8.4:50726312-50726331 | None:intergenic | 35.0% | |
| AGCTGCTTCGAACAAAAAAT+TGG | + | chr8.4:50728309-50728328 | MS.gene38907:CDS | 35.0% | |
| AGTTGAACATTCCTTATGCT+GGG | + | chr8.4:50726871-50726890 | MS.gene38907:CDS | 35.0% | |
| ATATACACCAGTCAGGTTAA+TGG | + | chr8.4:50726192-50726211 | MS.gene38907:intron | 35.0% | |
| ATATGAGCAACAGAAGAATG+TGG | - | chr8.4:50726501-50726520 | None:intergenic | 35.0% | |
| ATCAATGGATCAACCAAACA+GGG | + | chr8.4:50727039-50727058 | MS.gene38907:CDS | 35.0% | |
| ATGCTAGTTGTAAGAAGACA+AGG | - | chr8.4:50727943-50727962 | None:intergenic | 35.0% | |
| ATGGATACAATCCAATGCTT+TGG | - | chr8.4:50724024-50724043 | None:intergenic | 35.0% | |
| ATGTTGAGGATTTACATCGA+TGG | - | chr8.4:50724107-50724126 | None:intergenic | 35.0% | |
| CAACTAGCATCTATTTCCAA+GGG | + | chr8.4:50727953-50727972 | MS.gene38907:CDS | 35.0% | |
| CAAGATTCCATGCATAAAAG+GGG | - | chr8.4:50726310-50726329 | None:intergenic | 35.0% | |
| CATGATAATATGGTAGAAGG+GGG | + | chr8.4:50726042-50726061 | MS.gene38907:intron | 35.0% | |
| CCAAATTTACTAACCAACTC+CGG | + | chr8.4:50724801-50724820 | MS.gene38907:intron | 35.0% | |
| CCATGATAATATGGTAGAAG+GGG | + | chr8.4:50726041-50726060 | MS.gene38907:intron | 35.0% | |
| CGAGAACAGATACTAAAACA+AGG | - | chr8.4:50728258-50728277 | None:intergenic | 35.0% | |
| CTAGTAATAACTTTCTCTGC+CGG | - | chr8.4:50728540-50728559 | None:intergenic | 35.0% | |
| CTCTTGCAAAAAAACCTTCT+GGG | + | chr8.4:50727477-50727496 | MS.gene38907:CDS | 35.0% | |
| CTTGTAGAAGATTGCACTTA+AGG | - | chr8.4:50727799-50727818 | None:intergenic | 35.0% | |
| GATCAATATCATCTACATCG+AGG | - | chr8.4:50727772-50727791 | None:intergenic | 35.0% | |
| GCAAGATTCCATGCATAAAA+GGG | - | chr8.4:50726311-50726330 | None:intergenic | 35.0% | |
| GCATCACAATATGCATTCTT+TGG | + | chr8.4:50723607-50723626 | MS.gene38907:CDS | 35.0% | |
| GCTGCAACATATTATTCAGA+AGG | - | chr8.4:50727088-50727107 | None:intergenic | 35.0% | |
| GCTGCTTCGAACAAAAAATT+GGG | + | chr8.4:50728310-50728329 | MS.gene38907:CDS | 35.0% | |
| TATACAAGGGGAACAAAATG+TGG | + | chr8.4:50728429-50728448 | MS.gene38907:CDS | 35.0% | |
| TATCCATACCTTCGAAAAAG+TGG | - | chr8.4:50724334-50724353 | None:intergenic | 35.0% | |
| TCACACACTCATTCTGAATA+GGG | - | chr8.4:50725615-50725634 | None:intergenic | 35.0% | |
| TCTCTTGCAAAAAAACCTTC+TGG | + | chr8.4:50727476-50727495 | MS.gene38907:CDS | 35.0% | |
| TCTGGATTCGATTATTGAGA+GGG | - | chr8.4:50727019-50727038 | None:intergenic | 35.0% | |
| TCTTCTCCAAATTACAGTAC+AGG | + | chr8.4:50726846-50726865 | MS.gene38907:CDS | 35.0% | |
| TCTTGCAAAAAAACCTTCTG+GGG | + | chr8.4:50727478-50727497 | MS.gene38907:CDS | 35.0% | |
| TGCTGCTAAAGTAGTTAGTA+AGG | + | chr8.4:50728468-50728487 | MS.gene38907:CDS | 35.0% | |
| TTCACACACTCATTCTGAAT+AGG | - | chr8.4:50725616-50725635 | None:intergenic | 35.0% | |
| TTCGAAATCAAGGGGAAATT+GGG | + | chr8.4:50725660-50725679 | MS.gene38907:intron | 35.0% | |
| TTCGATGTAATCACATGTCT+CGG | - | chr8.4:50723380-50723399 | None:intergenic | 35.0% | |
| TTCTGGATTCGATTATTGAG+AGG | - | chr8.4:50727020-50727039 | None:intergenic | 35.0% | |
| TTGAGAACCAGTTAGAAGTT+CGG | - | chr8.4:50728290-50728309 | None:intergenic | 35.0% | |
| TTGTCTATTCTCTCTAACGA+TGG | - | chr8.4:50727267-50727286 | None:intergenic | 35.0% | |
| TTTACAAGTGGAAAGCCTTT+GGG | + | chr8.4:50725885-50725904 | MS.gene38907:intron | 35.0% | |
| ! | ATAACAGTTGGTGCATTGAT+GGG | - | chr8.4:50723956-50723975 | None:intergenic | 35.0% |
| ! | ATTTTGCCCAACCAAAATGA+AGG | + | chr8.4:50727517-50727536 | MS.gene38907:CDS | 35.0% |
| ! | GTGTTTTGTGGTCATTCATA+AGG | + | chr8.4:50726111-50726130 | MS.gene38907:intron | 35.0% |
| ! | TATAACAGTTGGTGCATTGA+TGG | - | chr8.4:50723957-50723976 | None:intergenic | 35.0% |
| !! | AATGGTTTTACAAGTGGAGA+AGG | + | chr8.4:50725936-50725955 | MS.gene38907:intron | 35.0% |
| !! | ATTTTGGGTCTTCGAAATCA+AGG | + | chr8.4:50725650-50725669 | MS.gene38907:intron | 35.0% |
| !! | GAAAGATCCTTCATTTTGGT+TGG | - | chr8.4:50727527-50727546 | None:intergenic | 35.0% |
| !! | GGAAATATGCTTTGGGAAAA+TGG | - | chr8.4:50724003-50724022 | None:intergenic | 35.0% |
| !! | TTGAACAACTTTCGCTTTTC+TGG | - | chr8.4:50727340-50727359 | None:intergenic | 35.0% |
| !! | TTTGGTTGATCCATTGATTC+TGG | - | chr8.4:50727037-50727056 | None:intergenic | 35.0% |
| !! | TTTTGGGTCTTCGAAATCAA+GGG | + | chr8.4:50725651-50725670 | MS.gene38907:intron | 35.0% |
| !!! | AACATTTTGGAGTTTCGACT+TGG | + | chr8.4:50726232-50726251 | MS.gene38907:intron | 35.0% |
| !!! | AAGCGAGCTTGTAGTTTTAA+TGG | + | chr8.4:50725918-50725937 | MS.gene38907:intron | 35.0% |
| !!! | GTTTTTTTGCAAGAGAAGCT+TGG | - | chr8.4:50727472-50727491 | None:intergenic | 35.0% |
| AAAACCAACCCGTAAACATC+GGG | + | chr8.4:50727286-50727305 | MS.gene38907:CDS | 40.0% | |
| AACAACCATAGCAAGATCAC+TGG | - | chr8.4:50728116-50728135 | None:intergenic | 40.0% | |
| AACAGAAGAATGTGGATGTG+AGG | - | chr8.4:50726493-50726512 | None:intergenic | 40.0% | |
| AACCAAACAGGGTTGTATCT+TGG | + | chr8.4:50727050-50727069 | MS.gene38907:CDS | 40.0% | |
| AATAGGGAGAAAACCAAGTG+TGG | - | chr8.4:50725599-50725618 | None:intergenic | 40.0% | |
| ACCATCCTCAATAGTGATTC+TGG | - | chr8.4:50727738-50727757 | None:intergenic | 40.0% | |
| AGGGGAGCCAGTATTAAATT+GGG | - | chr8.4:50727000-50727019 | None:intergenic | 40.0% | |
| ATAGGAAGACGTTCTGTACA+AGG | - | chr8.4:50726538-50726557 | None:intergenic | 40.0% | |
| ATGAAGCACGGATACAAACA+CGG | - | chr8.4:50723464-50723483 | None:intergenic | 40.0% | |
| ATGTGTGAAATGGAGGAATG+TGG | - | chr8.4:50726687-50726706 | None:intergenic | 40.0% | |
| ATGTTGCTAGTCCTTCCAAA+AGG | - | chr8.4:50727856-50727875 | None:intergenic | 40.0% | |
| ATTCAATTCTGCGTCACACT+TGG | + | chr8.4:50726935-50726954 | MS.gene38907:CDS | 40.0% | |
| CAAACACGCATCTTTACAAG+TGG | + | chr8.4:50725873-50725892 | MS.gene38907:intron | 40.0% | |
| CACTTGTAAAGATGCGTGTT+TGG | - | chr8.4:50725875-50725894 | None:intergenic | 40.0% | |
| CAGCATAAGGAATGTTCAAC+TGG | - | chr8.4:50726872-50726891 | None:intergenic | 40.0% | |
| CAGTTGAACATTCCTTATGC+TGG | + | chr8.4:50726870-50726889 | MS.gene38907:CDS | 40.0% | |
| CCCCTTCTACCATATTATCA+TGG | - | chr8.4:50726044-50726063 | None:intergenic | 40.0% | |
| CCTCGTTAAACGTAACAGAA+GGG | - | chr8.4:50723690-50723709 | None:intergenic | 40.0% | |
| CGTTCCTTCTATGTGTGAAA+TGG | - | chr8.4:50726697-50726716 | None:intergenic | 40.0% | |
| CTGGATTCGATTATTGAGAG+GGG | - | chr8.4:50727018-50727037 | None:intergenic | 40.0% | |
| CTGGATTTAACAGCTATGCT+GGG | + | chr8.4:50728587-50728606 | MS.gene38907:CDS | 40.0% | |
| CTTCGAAATCAAGGGGAAAT+TGG | + | chr8.4:50725659-50725678 | MS.gene38907:intron | 40.0% | |
| CTTTACAAGTGGAAAGCCTT+TGG | + | chr8.4:50725884-50725903 | MS.gene38907:intron | 40.0% | |
| GAACAAGAACCTATGAAGCA+CGG | - | chr8.4:50723476-50723495 | None:intergenic | 40.0% | |
| GAACTCAATTCACAAGAAGG+AGG | + | chr8.4:50727825-50727844 | MS.gene38907:CDS | 40.0% | |
| GACATAGATATACACCAGTC+AGG | + | chr8.4:50726185-50726204 | MS.gene38907:intron | 40.0% | |
| GAGACACTGATCCATTATGA+TGG | - | chr8.4:50727121-50727140 | None:intergenic | 40.0% | |
| GTGGAACTCAATTCACAAGA+AGG | + | chr8.4:50727822-50727841 | MS.gene38907:CDS | 40.0% | |
| GTTGAACATTCCTTATGCTG+GGG | + | chr8.4:50726872-50726891 | MS.gene38907:CDS | 40.0% | |
| GTTGTTTGTCAGTGTATCGA+AGG | + | chr8.4:50728130-50728149 | MS.gene38907:CDS | 40.0% | |
| TAAGAAGACAAGGTCATCCT+TGG | - | chr8.4:50727933-50727952 | None:intergenic | 40.0% | |
| TAATCACATGTCTCGGTATC+AGG | - | chr8.4:50723373-50723392 | None:intergenic | 40.0% | |
| TAGCATCTATTTCCAAGGGA+CGG | + | chr8.4:50727957-50727976 | MS.gene38907:CDS | 40.0% | |
| TAGGAAGACGTTCTGTACAA+GGG | - | chr8.4:50726537-50726556 | None:intergenic | 40.0% | |
| TCCTCCATTTCACACATAGA+AGG | + | chr8.4:50726690-50726709 | MS.gene38907:CDS | 40.0% | |
| TCCTCGTTAAACGTAACAGA+AGG | - | chr8.4:50723691-50723710 | None:intergenic | 40.0% | |
| TCCTTCTATGTGTGAAATGG+AGG | - | chr8.4:50726694-50726713 | None:intergenic | 40.0% | |
| TGATCAAACCAGTTAGGAAC+AGG | - | chr8.4:50726612-50726631 | None:intergenic | 40.0% | |
| TGCAATCTTCTACAAGATGG+TGG | + | chr8.4:50727803-50727822 | MS.gene38907:CDS | 40.0% | |
| TGGTCATTCATAAGGTCTGT+AGG | + | chr8.4:50726119-50726138 | MS.gene38907:intron | 40.0% | |
| TGTATCGAAGGAATGGATCT+TGG | + | chr8.4:50728142-50728161 | MS.gene38907:CDS | 40.0% | |
| TGTTTGTATCCGTGCTTCAT+AGG | + | chr8.4:50723464-50723483 | MS.gene38907:intron | 40.0% | |
| TTCAATTCTGCGTCACACTT+GGG | + | chr8.4:50726936-50726955 | MS.gene38907:CDS | 40.0% | |
| TTCTGTTACGTTTAACGAGG+AGG | + | chr8.4:50723690-50723709 | MS.gene38907:CDS | 40.0% | |
| TTGAACATTCCTTATGCTGG+GGG | + | chr8.4:50726873-50726892 | MS.gene38907:CDS | 40.0% | |
| TTGTCAGTGTATCGAAGGAA+TGG | + | chr8.4:50728135-50728154 | MS.gene38907:CDS | 40.0% | |
| TTGTGTCCATTCTTTCCTAG+CGG | - | chr8.4:50727896-50727915 | None:intergenic | 40.0% | |
| TTTAATCACCATCTTCCGTC+TGG | + | chr8.4:50727236-50727255 | MS.gene38907:CDS | 40.0% | |
| TTTGGGTCTTCGAAATCAAG+GGG | + | chr8.4:50725652-50725671 | MS.gene38907:intron | 40.0% | |
| ! | AACTGGCCTGTACTGTAATT+TGG | - | chr8.4:50726855-50726874 | None:intergenic | 40.0% |
| ! | AAGAAGGAGGAATGTCCTTT+TGG | + | chr8.4:50727838-50727857 | MS.gene38907:CDS | 40.0% |
| ! | ATGCAGTCACTGGTTATACA+AGG | + | chr8.4:50728415-50728434 | MS.gene38907:CDS | 40.0% |
| ! | CCAAAAAGTGCAGGAGTTAT+CGG | + | chr8.4:50725208-50725227 | MS.gene38907:CDS | 40.0% |
| ! | CCGGAGTTGGTTAGTAAATT+TGG | - | chr8.4:50724804-50724823 | None:intergenic | 40.0% |
| ! | CTTTTTCTCTCCCCTCTATA+CGG | + | chr8.4:50725563-50725582 | MS.gene38907:intron | 40.0% |
| ! | GAATGTTTTCCCTGCTTTGA+TGG | + | chr8.4:50724143-50724162 | MS.gene38907:intron | 40.0% |
| ! | GTACTGACACAAATACGACA+CGG | - | chr8.4:50723351-50723370 | None:intergenic | 40.0% |
| ! | GTACTTTTCCACATTGCAGA+CGG | + | chr8.4:50724269-50724288 | MS.gene38907:intron | 40.0% |
| ! | TGCAGTCACTGGTTATACAA+GGG | + | chr8.4:50728416-50728435 | MS.gene38907:CDS | 40.0% |
| ! | TTGACTTGACCATCAAAGCA+GGG | - | chr8.4:50724155-50724174 | None:intergenic | 40.0% |
| ! | TTTTTCTCTCCCCTCTATAC+GGG | + | chr8.4:50725564-50725583 | MS.gene38907:intron | 40.0% |
| !! | GAAGACTTTGGTGCCAAAAT+TGG | - | chr8.4:50726786-50726805 | None:intergenic | 40.0% |
| !! | GGAAATCGTTCATTTTGGCA+GGG | + | chr8.4:50728331-50728350 | MS.gene38907:CDS | 40.0% |
| !! | GTGAAACTGTTGATGATGAC+AGG | + | chr8.4:50726646-50726665 | MS.gene38907:CDS | 40.0% |
| !! | TTCAGGTTGATACTATAGGG+AGG | + | chr8.4:50727585-50727604 | MS.gene38907:CDS | 40.0% |
| !!! | CAACCACTTTTTCGAAGGTA+TGG | + | chr8.4:50724328-50724347 | MS.gene38907:intron | 40.0% |
| !!! | TCTCACAACCACTTTTTCGA+AGG | + | chr8.4:50724323-50724342 | MS.gene38907:CDS | 40.0% |
| AAACATCGGGTCTCTCAACA+GGG | + | chr8.4:50727299-50727318 | MS.gene38907:CDS | 45.0% | |
| AAACCTGTGTGGCTCAGTAT+TGG | - | chr8.4:50727564-50727583 | None:intergenic | 45.0% | |
| AAATATGAGCCGCATCTTGG+TGG | + | chr8.4:50726966-50726985 | MS.gene38907:CDS | 45.0% | |
| ACCAGTTAGAAGTTCGGTAG+CGG | - | chr8.4:50728284-50728303 | None:intergenic | 45.0% | |
| ACGGATACAAACACGGACAT+TGG | - | chr8.4:50723457-50723476 | None:intergenic | 45.0% | |
| AGCAACATCACTTCATCTCG+TGG | + | chr8.4:50727868-50727887 | MS.gene38907:CDS | 45.0% | |
| CACGGACATTGGATATGACA+CGG | - | chr8.4:50723446-50723465 | None:intergenic | 45.0% | |
| CAGATTCCTCTGCTTCTGAA+TGG | + | chr8.4:50726406-50726425 | MS.gene38907:intron | 45.0% | |
| CATTGCAGACGGATGATGTA+AGG | + | chr8.4:50724280-50724299 | MS.gene38907:intron | 45.0% | |
| CCAAAATATGAGCCGCATCT+TGG | + | chr8.4:50726963-50726982 | MS.gene38907:CDS | 45.0% | |
| CCCTTCTGTTACGTTTAACG+AGG | + | chr8.4:50723687-50723706 | MS.gene38907:CDS | 45.0% | |
| CGTATAGAGGGGAGAGAAAA+AGG | - | chr8.4:50725565-50725584 | None:intergenic | 45.0% | |
| CTAACGATGGATGATCCAGA+CGG | - | chr8.4:50727254-50727273 | None:intergenic | 45.0% | |
| CTAGTGAACCTGTTCCTAAC+TGG | + | chr8.4:50726601-50726620 | MS.gene38907:CDS | 45.0% | |
| CTCCAAGATACAACCCTGTT+TGG | - | chr8.4:50727055-50727074 | None:intergenic | 45.0% | |
| CTTTAGGCAGAACACACAGA+GGG | - | chr8.4:50724187-50724206 | None:intergenic | 45.0% | |
| GAACAAAATGTGGCTGCGAT+TGG | + | chr8.4:50728439-50728458 | MS.gene38907:CDS | 45.0% | |
| GAGGATCAGCTTCAAGAAGA+GGG | - | chr8.4:50727640-50727659 | None:intergenic | 45.0% | |
| GAGGGGAGCCAGTATTAAAT+TGG | - | chr8.4:50727001-50727020 | None:intergenic | 45.0% | |
| GCCAGAATCACTATTGAGGA+TGG | + | chr8.4:50727734-50727753 | MS.gene38907:CDS | 45.0% | |
| GCTAAGTTTCCACCAAGATG+CGG | - | chr8.4:50726978-50726997 | None:intergenic | 45.0% | |
| GCTGGATTTAACAGCTATGC+TGG | + | chr8.4:50728586-50728605 | MS.gene38907:CDS | 45.0% | |
| GGAAAGAATGGACACAAAGC+TGG | + | chr8.4:50727899-50727918 | MS.gene38907:CDS | 45.0% | |
| GTTCTCAGGATGGAAAACGA+TGG | + | chr8.4:50726466-50726485 | MS.gene38907:CDS | 45.0% | |
| GTTGAGAGACCCGATGTTTA+CGG | - | chr8.4:50727298-50727317 | None:intergenic | 45.0% | |
| TAAACATCGGGTCTCTCAAC+AGG | + | chr8.4:50727298-50727317 | MS.gene38907:CDS | 45.0% | |
| TACATCATCCGTCTGCAATG+TGG | - | chr8.4:50724280-50724299 | None:intergenic | 45.0% | |
| TAGCTGTTAAATCCAGCCAC+AGG | - | chr8.4:50728583-50728602 | None:intergenic | 45.0% | |
| TATCTTCGGTTGCTTGATCC+TGG | + | chr8.4:50727995-50728014 | MS.gene38907:CDS | 45.0% | |
| TCAACCTGAAGAAACCTGTG+TGG | - | chr8.4:50727575-50727594 | None:intergenic | 45.0% | |
| TGCTTCTGAATGGTCACAGA+GGG | + | chr8.4:50726416-50726435 | MS.gene38907:CDS | 45.0% | |
| TGTGTCCATTCTTTCCTAGC+GGG | - | chr8.4:50727895-50727914 | None:intergenic | 45.0% | |
| TTACTTCTTATCCTCCCCCT+GGG | + | chr8.4:50726808-50726827 | MS.gene38907:CDS | 45.0% | |
| TTGAGAGACCCGATGTTTAC+GGG | - | chr8.4:50727297-50727316 | None:intergenic | 45.0% | |
| TTTACTTCTTATCCTCCCCC+TGG | + | chr8.4:50726807-50726826 | MS.gene38907:CDS | 45.0% | |
| ! | AGCTCCTAGCGAAGTATCTT+CGG | + | chr8.4:50727981-50728000 | MS.gene38907:CDS | 45.0% |
| ! | AGGAGGAATGTCCTTTTGGA+AGG | + | chr8.4:50727842-50727861 | MS.gene38907:CDS | 45.0% |
| ! | AGTTATTGGCCTGCTTCTAC+AGG | - | chr8.4:50724694-50724713 | None:intergenic | 45.0% |
| ! | CCAAGATGCGGCTCATATTT+TGG | - | chr8.4:50726966-50726985 | None:intergenic | 45.0% |
| ! | CCGATAACTCCTGCACTTTT+TGG | - | chr8.4:50725211-50725230 | None:intergenic | 45.0% |
| ! | GCAGTCACTGGTTATACAAG+GGG | + | chr8.4:50728417-50728436 | MS.gene38907:CDS | 45.0% |
| ! | GGAATGGATCTTGGTTCTCT+TGG | + | chr8.4:50728151-50728170 | MS.gene38907:CDS | 45.0% |
| ! | GTTAGTGGACCAAAAAGTGC+AGG | + | chr8.4:50725199-50725218 | MS.gene38907:CDS | 45.0% |
| ! | TGAAGCTCTTGTTGCTTGTC+AGG | - | chr8.4:50726747-50726766 | None:intergenic | 45.0% |
| ! | TGGGAAATTGCCGTGTTTTG+TGG | + | chr8.4:50726099-50726118 | MS.gene38907:intron | 45.0% |
| ! | TTCAGCACTTGAGGTGCTTA+GGG | + | chr8.4:50725349-50725368 | MS.gene38907:intron | 45.0% |
| ! | TTTAGGGTGAGTGCTGCAAA+TGG | - | chr8.4:50725521-50725540 | None:intergenic | 45.0% |
| ! | TTTCAGCACTTGAGGTGCTT+AGG | + | chr8.4:50725348-50725367 | MS.gene38907:intron | 45.0% |
| !! | CTGTTGATGATGACAGGAGA+TGG | + | chr8.4:50726652-50726671 | MS.gene38907:CDS | 45.0% |
| !! | GGGAAATCGTTCATTTTGGC+AGG | + | chr8.4:50728330-50728349 | MS.gene38907:CDS | 45.0% |
| !! | GTTGACTTGACCATCAAAGC+AGG | - | chr8.4:50724156-50724175 | None:intergenic | 45.0% |
| !!! | ACTTTCGCTTTTCTGGCTAC+TGG | - | chr8.4:50727333-50727352 | None:intergenic | 45.0% |
| !! | TATTAAAAAATAAAATAGAT+AGG | + | chr8.4:50724492-50724511 | MS.gene38907:intron | 5.0% |
| AATTCTGCGTCACACTTGGG+TGG | + | chr8.4:50726939-50726958 | MS.gene38907:CDS | 50.0% | |
| ACAAGTGGAAAGCCTTTGGG+TGG | + | chr8.4:50725888-50725907 | MS.gene38907:intron | 50.0% | |
| ACCGCTACCGAACTTCTAAC+TGG | + | chr8.4:50728280-50728299 | MS.gene38907:CDS | 50.0% | |
| AGAACCTTCGTCAACCCAGT+AGG | - | chr8.4:50726451-50726470 | None:intergenic | 50.0% | |
| AGAGGGATGATGTTCCCTAC+TGG | + | chr8.4:50726433-50726452 | MS.gene38907:CDS | 50.0% | |
| ATTGTTGAGACCTACCCCCA+GGG | - | chr8.4:50726827-50726846 | None:intergenic | 50.0% | |
| CAAGTGGAAAGCCTTTGGGT+GGG | + | chr8.4:50725889-50725908 | MS.gene38907:intron | 50.0% | |
| CACTAGAGCGATGTTGGAGT+TGG | - | chr8.4:50726587-50726606 | None:intergenic | 50.0% | |
| CAGGTTCACTAGAGCGATGT+TGG | - | chr8.4:50726593-50726612 | None:intergenic | 50.0% | |
| CCAGTGACTGCATGATACTC+TGG | - | chr8.4:50728408-50728427 | None:intergenic | 50.0% | |
| CCTCTGTGTGTTCTGCCTAA+AGG | + | chr8.4:50724185-50724204 | MS.gene38907:intron | 50.0% | |
| CCTTTAGGCAGAACACACAG+AGG | - | chr8.4:50724188-50724207 | None:intergenic | 50.0% | |
| CGCAGCCAGAATCACTATTG+AGG | + | chr8.4:50727730-50727749 | MS.gene38907:CDS | 50.0% | |
| CTGCTTCTGAATGGTCACAG+AGG | + | chr8.4:50726415-50726434 | MS.gene38907:CDS | 50.0% | |
| CTGTGACCATTCAGAAGCAG+AGG | - | chr8.4:50726415-50726434 | None:intergenic | 50.0% | |
| CTTCCTATCCTGAGCAGCAA+CGG | + | chr8.4:50726550-50726569 | MS.gene38907:CDS | 50.0% | |
| GAACAATGGCTCCTGCTCAA+GGG | - | chr8.4:50727711-50727730 | None:intergenic | 50.0% | |
| GAACACACAGAGGGCAGAAT+CGG | - | chr8.4:50724178-50724197 | None:intergenic | 50.0% | |
| GAACCTTCGTCAACCCAGTA+GGG | - | chr8.4:50726450-50726469 | None:intergenic | 50.0% | |
| GACTGCCAGTGATCTTGCTA+TGG | + | chr8.4:50728108-50728127 | MS.gene38907:CDS | 50.0% | |
| GAGGGATGATGTTCCCTACT+GGG | + | chr8.4:50726434-50726453 | MS.gene38907:CDS | 50.0% | |
| GCAACCGAAGATACTTCGCT+AGG | - | chr8.4:50727988-50728007 | None:intergenic | 50.0% | |
| GGAGGATCAGCTTCAAGAAG+AGG | - | chr8.4:50727641-50727660 | None:intergenic | 50.0% | |
| GGGAGAAAACCAAGTGTGGT+AGG | - | chr8.4:50725595-50725614 | None:intergenic | 50.0% | |
| GTAGGTGTGTCCCGTATAGA+GGG | - | chr8.4:50725577-50725596 | None:intergenic | 50.0% | |
| GTGCAGGAGTTATCGGTGAT+CGG | + | chr8.4:50725215-50725234 | MS.gene38907:CDS | 50.0% | |
| GTTGACGAAGGTTCTCAGGA+TGG | + | chr8.4:50726456-50726475 | MS.gene38907:CDS | 50.0% | |
| GTTGCCGAGGAAGTTGAGTT+GGG | + | chr8.4:50723637-50723656 | MS.gene38907:CDS | 50.0% | |
| TAACTTTCTCTGCCGGTCGT+TGG | - | chr8.4:50728533-50728552 | None:intergenic | 50.0% | |
| TACTTCTTATCCTCCCCCTG+GGG | + | chr8.4:50726809-50726828 | MS.gene38907:CDS | 50.0% | |
| TAGGTGTGTCCCGTATAGAG+GGG | - | chr8.4:50725576-50725595 | None:intergenic | 50.0% | |
| TATCCTGTTCAAGCGTCAGC+TGG | + | chr8.4:50727185-50727204 | MS.gene38907:CDS | 50.0% | |
| TCTGCTGCTGCTGAATCAGA+GGG | - | chr8.4:50728088-50728107 | None:intergenic | 50.0% | |
| TCTGTGTTGCCTGTAGAAGC+AGG | + | chr8.4:50724682-50724701 | MS.gene38907:intron | 50.0% | |
| TGAGCCACACAGGTTTCTTC+AGG | + | chr8.4:50727568-50727587 | MS.gene38907:CDS | 50.0% | |
| TGCAACTGAGGCAGTAAGTG+AGG | - | chr8.4:50727143-50727162 | None:intergenic | 50.0% | |
| TGCAGGAGTTATCGGTGATC+GGG | + | chr8.4:50725216-50725235 | MS.gene38907:CDS | 50.0% | |
| TGCTGCTGTTGTTGCAACTG+AGG | - | chr8.4:50727155-50727174 | None:intergenic | 50.0% | |
| TGGATGATCCAGACGGAAGA+TGG | - | chr8.4:50727247-50727266 | None:intergenic | 50.0% | |
| TGTTGCCGAGGAAGTTGAGT+TGG | + | chr8.4:50723636-50723655 | MS.gene38907:CDS | 50.0% | |
| TTCAGAGAAGTCCCTTGAGC+AGG | + | chr8.4:50727697-50727716 | MS.gene38907:CDS | 50.0% | |
| ! | ATCCTGGTAGTGAGCTTGTG+CGG | + | chr8.4:50728011-50728030 | MS.gene38907:CDS | 50.0% |
| ! | CCAGAGTATCATGCAGTCAC+TGG | + | chr8.4:50728405-50728424 | MS.gene38907:CDS | 50.0% |
| ! | CTTTGGGAAAGATGTTGCCG+AGG | + | chr8.4:50723624-50723643 | MS.gene38907:CDS | 50.0% |
| ! | GTGATTCTGGCTGCGAACAA+TGG | - | chr8.4:50727725-50727744 | None:intergenic | 50.0% |
| ! | TTCTGGCTGCTTGATGTTGC+CGG | - | chr8.4:50724823-50724842 | None:intergenic | 50.0% |
| ! | TTGCCGAGGAAGTTGAGTTG+GGG | + | chr8.4:50723638-50723657 | MS.gene38907:CDS | 50.0% |
| !! | CAAAGCTGGTCTTACTGCCA+AGG | + | chr8.4:50727913-50727932 | MS.gene38907:CDS | 50.0% |
| !! | TGTGTGGCTCAGTATTGGCA+CGG | - | chr8.4:50727559-50727578 | None:intergenic | 50.0% |
| AAGCCAGCTGACGCTTGAAC+AGG | - | chr8.4:50727191-50727210 | None:intergenic | 55.0% | |
| AATTCGCTCAGAGCCACCAC+TGG | - | chr8.4:50727675-50727694 | None:intergenic | 55.0% | |
| ACTTCTTATCCTCCCCCTGG+GGG | + | chr8.4:50726810-50726829 | MS.gene38907:CDS | 55.0% | |
| ATCCGCACAAGCTCACTACC+AGG | - | chr8.4:50728016-50728035 | None:intergenic | 55.0% | |
| ATCTCCAGCAGGACTTCCGA+GGG | - | chr8.4:50728227-50728246 | None:intergenic | 55.0% | |
| ATGTGAGCTCCCCCAGCATA+AGG | - | chr8.4:50726885-50726904 | None:intergenic | 55.0% | |
| CGAACAATGGCTCCTGCTCA+AGG | - | chr8.4:50727712-50727731 | None:intergenic | 55.0% | |
| CTCTGCTGCTGCTGAATCAG+AGG | - | chr8.4:50728089-50728108 | None:intergenic | 55.0% | |
| CTGCTGCTGCTGAATCAGAG+GGG | - | chr8.4:50728087-50728106 | None:intergenic | 55.0% | |
| CTGCTTGATGTTGCCGGAGT+TGG | - | chr8.4:50724817-50724836 | None:intergenic | 55.0% | |
| CTTGCACGCAAGAGCTCAAC+AGG | - | chr8.4:50728499-50728518 | None:intergenic | 55.0% | |
| GAGACCCGATGTTTACGGGT+TGG | - | chr8.4:50727293-50727312 | None:intergenic | 55.0% | |
| GATTGTTGAGACCTACCCCC+AGG | - | chr8.4:50726828-50726847 | None:intergenic | 55.0% | |
| GGTAGGTGTGTCCCGTATAG+AGG | - | chr8.4:50725578-50725597 | None:intergenic | 55.0% | |
| GTCTTCCTCACACCAACGAC+CGG | + | chr8.4:50728518-50728537 | MS.gene38907:CDS | 55.0% | |
| GTGCCAATACTGAGCCACAC+AGG | + | chr8.4:50727558-50727577 | MS.gene38907:CDS | 55.0% | |
| GTGGACCCGCTAGGAAAGAA+TGG | + | chr8.4:50727887-50727906 | MS.gene38907:CDS | 55.0% | |
| TCAGCTTCAAGAAGAGGGCG+AGG | - | chr8.4:50727635-50727654 | None:intergenic | 55.0% | |
| TGGTGCTTGTCTTGCAGCAG+TGG | + | chr8.4:50728171-50728190 | MS.gene38907:CDS | 55.0% | |
| TTATGCTGGGGGAGCTCACA+TGG | + | chr8.4:50726884-50726903 | MS.gene38907:CDS | 55.0% | |
| TTGTTGAGACCTACCCCCAG+GGG | - | chr8.4:50726826-50726845 | None:intergenic | 55.0% | |
| ! | AGCACTTGAGGTGCTTAGGG+TGG | + | chr8.4:50725352-50725371 | MS.gene38907:intron | 55.0% |
| ! | CTGGGTTGACGAAGGTTCTC+AGG | + | chr8.4:50726452-50726471 | MS.gene38907:CDS | 55.0% |
| ! | GCACTTGAGGTGCTTAGGGT+GGG | + | chr8.4:50725353-50725372 | MS.gene38907:intron | 55.0% |
| ! | GCGTCAGCTGGCTTAATGTC+AGG | + | chr8.4:50727197-50727216 | MS.gene38907:CDS | 55.0% |
| ! | GCTTGTGCGGATTGTCTGCA+TGG | + | chr8.4:50728024-50728043 | MS.gene38907:CDS | 55.0% |
| ! | GTTCCCTACTGGGTTGACGA+AGG | + | chr8.4:50726444-50726463 | MS.gene38907:CDS | 55.0% |
| !! | GTGTGGCTCAGTATTGGCAC+GGG | - | chr8.4:50727558-50727577 | None:intergenic | 55.0% |
| !! | TGCCGAGGAAGTTGAGTTGG+GGG | + | chr8.4:50723639-50723658 | MS.gene38907:CDS | 55.0% |
| AAGAGGGCGAGGCTGACGAA+TGG | - | chr8.4:50727624-50727643 | None:intergenic | 60.0% | |
| AGAGGGCGAGGCTGACGAAT+GGG | - | chr8.4:50727623-50727642 | None:intergenic | 60.0% | |
| CATCTCCAGCAGGACTTCCG+AGG | - | chr8.4:50728228-50728247 | None:intergenic | 60.0% | |
| CCAAACTCCTCTGCCAGTGG+TGG | + | chr8.4:50727659-50727678 | MS.gene38907:CDS | 60.0% | |
| CCACCACTGGCAGAGGAGTT+TGG | - | chr8.4:50727662-50727681 | None:intergenic | 60.0% | |
| CCACTGGCAGAGGAGTTTGG+AGG | - | chr8.4:50727659-50727678 | None:intergenic | 60.0% | |
| CCCCCCCAACTCAACTTCCT+CGG | - | chr8.4:50723644-50723663 | None:intergenic | 60.0% | |
| CCTCCAAACTCCTCTGCCAG+TGG | + | chr8.4:50727656-50727675 | MS.gene38907:CDS | 60.0% | |
| CGCTTACAGCACCCACCCAA+AGG | - | chr8.4:50725903-50725922 | None:intergenic | 60.0% | |
| CGGGACACACCTACCACACT+TGG | + | chr8.4:50725583-50725602 | MS.gene38907:intron | 60.0% | |
| CTCGGAAGTCCTGCTGGAGA+TGG | + | chr8.4:50728226-50728245 | MS.gene38907:CDS | 60.0% | |
| CTGCCGTTGCTGCTCAGGAT+AGG | - | chr8.4:50726556-50726575 | None:intergenic | 60.0% | |
| CTTCATCTCGTGGACCCGCT+AGG | + | chr8.4:50727878-50727897 | MS.gene38907:CDS | 60.0% | |
| TCTCCAGCAGGACTTCCGAG+GGG | - | chr8.4:50728226-50728245 | None:intergenic | 60.0% | |
| TGTTGAGACCTACCCCCAGG+GGG | - | chr8.4:50726825-50726844 | None:intergenic | 60.0% | |
| !! | AGGGAAGCACCATCTCCAGC+AGG | - | chr8.4:50728238-50728257 | None:intergenic | 60.0% |
| !! | CCGAGGAAGTTGAGTTGGGG+GGG | + | chr8.4:50723641-50723660 | MS.gene38907:CDS | 60.0% |
| !! | GCCGAGGAAGTTGAGTTGGG+GGG | + | chr8.4:50723640-50723659 | MS.gene38907:CDS | 60.0% |
| CGCTAGGAGCTTCCGTCCCT+TGG | - | chr8.4:50727972-50727991 | None:intergenic | 65.0% | |
| CTCAGAGCCACCACTGGCAG+AGG | - | chr8.4:50727669-50727688 | None:intergenic | 65.0% | |
| CTCCAGCAGGACTTCCGAGG+GGG | - | chr8.4:50728225-50728244 | None:intergenic | 65.0% | |
| CTCTGCCGGTCGTTGGTGTG+AGG | - | chr8.4:50728526-50728545 | None:intergenic | 65.0% | |
| CTTATCCTCCCCCTGGGGGT+AGG | + | chr8.4:50726814-50726833 | MS.gene38907:CDS | 65.0% | |
| TGCAGCTGCCGTTGCTGCTC+AGG | - | chr8.4:50726561-50726580 | None:intergenic | 65.0% | |
| CAGCGCTCTTCGCCTGTGGC+TGG | + | chr8.4:50728568-50728587 | MS.gene38907:CDS | 70.0% | |
| CGCTCAGCGCTCTTCGCCTG+TGG | + | chr8.4:50728564-50728583 | MS.gene38907:CDS | 70.0% | |
| GCGCAGAGGAGGAGGCTCTG+AGG | - | chr8.4:50728203-50728222 | None:intergenic | 70.0% | |
| TGAGACCTACCCCCAGGGGG+AGG | - | chr8.4:50726822-50726841 | None:intergenic | 70.0% | |
| CCTCCTCCTCTGCGCCCCCT+CGG | + | chr8.4:50728208-50728227 | MS.gene38907:CDS | 75.0% | |
| CGCCCCCTCGGAAGTCCTGC+TGG | + | chr8.4:50728220-50728239 | MS.gene38907:CDS | 75.0% | |
| ! | CTTCCGAGGGGGCGCAGAGG+AGG | - | chr8.4:50728214-50728233 | None:intergenic | 75.0% |
| ! | GGACTTCCGAGGGGGCGCAG+AGG | - | chr8.4:50728217-50728236 | None:intergenic | 75.0% |
| !! | CCGAGGGGGCGCAGAGGAGG+AGG | - | chr8.4:50728211-50728230 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 50722881 | 50728654 | 50722881 | ID=MS.gene38907 |
| chr8.4 | mRNA | 50722881 | 50728654 | 50722881 | ID=MS.gene38907.t1;Parent=MS.gene38907 |
| chr8.4 | exon | 50722881 | 50722965 | 50722881 | ID=MS.gene38907.t1.exon1;Parent=MS.gene38907.t1 |
| chr8.4 | CDS | 50722881 | 50722965 | 50722881 | ID=cds.MS.gene38907.t1;Parent=MS.gene38907.t1 |
| chr8.4 | exon | 50723590 | 50723735 | 50723590 | ID=MS.gene38907.t1.exon2;Parent=MS.gene38907.t1 |
| chr8.4 | CDS | 50723590 | 50723735 | 50723590 | ID=cds.MS.gene38907.t1;Parent=MS.gene38907.t1 |
| chr8.4 | exon | 50724288 | 50724344 | 50724288 | ID=MS.gene38907.t1.exon3;Parent=MS.gene38907.t1 |
| chr8.4 | CDS | 50724288 | 50724344 | 50724288 | ID=cds.MS.gene38907.t1;Parent=MS.gene38907.t1 |
| chr8.4 | exon | 50725187 | 50725250 | 50725187 | ID=MS.gene38907.t1.exon4;Parent=MS.gene38907.t1 |
| chr8.4 | CDS | 50725187 | 50725250 | 50725187 | ID=cds.MS.gene38907.t1;Parent=MS.gene38907.t1 |
| chr8.4 | exon | 50726409 | 50728654 | 50726409 | ID=MS.gene38907.t1.exon5;Parent=MS.gene38907.t1 |
| chr8.4 | CDS | 50726409 | 50728654 | 50726409 | ID=cds.MS.gene38907.t1;Parent=MS.gene38907.t1 |
| Gene Sequence |
| Protein sequence |
