Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39059.t1 | XP_003625128.1 | 95.1 | 427 | 19 | 1 | 1 | 425 | 115 | 541 | 4.00E-220 | 773.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39059.t1 | Q10I20 | 34.8 | 411 | 216 | 6 | 1 | 410 | 213 | 572 | 4.1e-64 | 246.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39059.t1 | G7KTG8 | 95.1 | 427 | 19 | 1 | 1 | 425 | 115 | 541 | 2.9e-220 | 773.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053215 | MS.gene39059 | 0.801111 | 1.05E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39059.t1 | MTR_7g091280 | 95.785 | 427 | 16 | 1 | 1 | 425 | 115 | 541 | 0.0 | 851 |
| MS.gene39059.t1 | MTR_8g106640 | 35.351 | 413 | 215 | 8 | 2 | 410 | 52 | 416 | 2.63e-83 | 261 |
| MS.gene39059.t1 | MTR_8g106640 | 35.351 | 413 | 215 | 8 | 2 | 410 | 162 | 526 | 9.71e-82 | 261 |
| MS.gene39059.t1 | MTR_8g106640 | 35.351 | 413 | 215 | 8 | 2 | 410 | 198 | 562 | 3.18e-81 | 261 |
| MS.gene39059.t1 | MTR_5g043220 | 36.702 | 376 | 198 | 8 | 47 | 417 | 104 | 444 | 9.66e-76 | 243 |
| MS.gene39059.t1 | MTR_5g043230 | 37.326 | 359 | 178 | 7 | 45 | 394 | 62 | 382 | 1.14e-73 | 238 |
| MS.gene39059.t1 | MTR_5g011170 | 30.894 | 369 | 159 | 10 | 2 | 363 | 151 | 430 | 1.19e-47 | 169 |
| MS.gene39059.t1 | MTR_7g091270 | 48.276 | 87 | 23 | 1 | 248 | 334 | 22 | 86 | 8.81e-18 | 78.2 |
| MS.gene39059.t1 | MTR_8g106650 | 40.845 | 71 | 39 | 1 | 48 | 118 | 5 | 72 | 3.10e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39059.t1 | AT2G41640 | 62.981 | 416 | 113 | 3 | 1 | 415 | 113 | 488 | 0.0 | 550 |
| MS.gene39059.t1 | AT2G41640 | 62.981 | 416 | 113 | 3 | 1 | 415 | 20 | 395 | 0.0 | 550 |
| MS.gene39059.t1 | AT2G41640 | 63.861 | 404 | 105 | 3 | 1 | 403 | 113 | 476 | 0.0 | 540 |
| MS.gene39059.t1 | AT3G57380 | 60.789 | 431 | 123 | 6 | 1 | 424 | 109 | 500 | 0.0 | 530 |
| MS.gene39059.t1 | AT3G57380 | 61.021 | 431 | 122 | 6 | 1 | 424 | 1 | 392 | 0.0 | 527 |
| MS.gene39059.t1 | AT3G57380 | 61.021 | 431 | 122 | 6 | 1 | 424 | 1 | 392 | 0.0 | 527 |
| MS.gene39059.t1 | AT3G10320 | 59.036 | 415 | 133 | 6 | 1 | 413 | 114 | 493 | 3.31e-175 | 499 |
| MS.gene39059.t1 | AT2G03370 | 38.743 | 382 | 189 | 7 | 46 | 419 | 107 | 451 | 3.66e-91 | 283 |
| MS.gene39059.t1 | AT2G03370 | 38.743 | 382 | 189 | 7 | 46 | 419 | 109 | 453 | 4.14e-91 | 283 |
| MS.gene39059.t1 | AT2G03360 | 38.845 | 381 | 189 | 6 | 46 | 419 | 107 | 450 | 2.19e-88 | 276 |
| MS.gene39059.t1 | AT2G03360 | 38.845 | 381 | 189 | 6 | 46 | 419 | 111 | 454 | 2.79e-88 | 276 |
| MS.gene39059.t1 | AT3G18180 | 31.084 | 415 | 223 | 7 | 1 | 410 | 107 | 463 | 5.33e-67 | 221 |
| MS.gene39059.t1 | AT3G18170 | 31.504 | 419 | 226 | 7 | 1 | 410 | 16 | 382 | 1.25e-63 | 209 |
| MS.gene39059.t1 | AT3G18170 | 31.504 | 419 | 226 | 7 | 1 | 410 | 167 | 533 | 2.50e-62 | 210 |
Find 79 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCTTGTTAATGCTTTC+AGG | 0.044050 | 7.4:+17685732 | None:intergenic |
| TAAGGTCTAATTTAACATTT+TGG | 0.163748 | 7.4:+17685676 | None:intergenic |
| CTAGAGACAATAACCAATTT+TGG | 0.203861 | 7.4:+17686113 | None:intergenic |
| ACTTGAATGAACACAGATTT+AGG | 0.221082 | 7.4:+17685903 | None:intergenic |
| TTGTTCCTCTTGGTACTAAT+TGG | 0.239064 | 7.4:-17685881 | MS.gene39059:CDS |
| TGCACGAACGAAACCAAAAT+TGG | 0.247732 | 7.4:-17686126 | MS.gene39059:CDS |
| TGTTGATTTCAGAAACCTTT+TGG | 0.250209 | 7.4:-17686285 | MS.gene39059:CDS |
| GCTTATTCGCCTCGGATAAA+AGG | 0.255535 | 7.4:-17686257 | MS.gene39059:CDS |
| TGAGAATTTGCTAGTGAAAA+TGG | 0.272170 | 7.4:-17686066 | MS.gene39059:CDS |
| CTTATGAGTACACAGTTCTT+AGG | 0.273170 | 7.4:-17685626 | MS.gene39059:CDS |
| GTCTCCCACTTTCTAGTATA+GGG | 0.278642 | 7.4:+17686701 | None:intergenic |
| GTGAAAATGGCAGAGGAAAT+TGG | 0.288444 | 7.4:-17686053 | MS.gene39059:CDS |
| CTTTCAGGGTCTCTCAAAAT+AGG | 0.299027 | 7.4:+17685747 | None:intergenic |
| GAATGGTGGATCACGAAATA+TGG | 0.319520 | 7.4:-17686455 | MS.gene39059:CDS |
| ATGTTAAATTAGACCTTAGA+AGG | 0.322345 | 7.4:-17685671 | MS.gene39059:CDS |
| TTCAAACCAAGCTTCCTTGC+AGG | 0.322763 | 7.4:+17685834 | None:intergenic |
| TTGAGACCAACAATGGCTTC+AGG | 0.331391 | 7.4:+17686362 | None:intergenic |
| AATTAGACCTTAGAAGGTTC+AGG | 0.335913 | 7.4:-17685665 | MS.gene39059:CDS |
| CTTTCTTGTTAATGCTTTCA+GGG | 0.346346 | 7.4:+17685733 | None:intergenic |
| TGTTCCTCTTGGTACTAATT+GGG | 0.362453 | 7.4:-17685880 | MS.gene39059:CDS |
| TTCATTCAAGTTGTTCCTCT+TGG | 0.365056 | 7.4:-17685891 | MS.gene39059:CDS |
| TGTTTCCCTGAAGCCATTGT+TGG | 0.377591 | 7.4:-17686368 | MS.gene39059:CDS |
| TTATCTTCGCTAAAATTAAT+CGG | 0.378613 | 7.4:+17686401 | None:intergenic |
| TTCACAGTGGTTGGTGTTGA+AGG | 0.385507 | 7.4:+17685592 | None:intergenic |
| GCGAATAAGCTTTGTCCAAA+AGG | 0.394660 | 7.4:+17686270 | None:intergenic |
| TGTCTCCCACTTTCTAGTAT+AGG | 0.400966 | 7.4:+17686700 | None:intergenic |
| ACCTTAGAAGGTTCAGGAAA+AGG | 0.416677 | 7.4:-17685659 | MS.gene39059:CDS |
| GCCACAACAATAACGTTTCA+AGG | 0.428011 | 7.4:-17686787 | MS.gene39059:CDS |
| AGCCGTGGATTCCGCATTGA+TGG | 0.443208 | 7.4:-17686324 | MS.gene39059:CDS |
| TGGGCTGCAGATACTTATTA+CGG | 0.445783 | 7.4:-17685861 | MS.gene39059:CDS |
| ATTGAATCTCATTTCAAAGA+AGG | 0.447770 | 7.4:-17686654 | MS.gene39059:CDS |
| GACGTTATGATTGGTGTTCA+TGG | 0.453758 | 7.4:-17685957 | MS.gene39059:CDS |
| TGAGACCAACAATGGCTTCA+GGG | 0.454768 | 7.4:+17686363 | None:intergenic |
| GCGAATTCGCCTAGTGTTCA+AGG | 0.455353 | 7.4:-17686632 | MS.gene39059:CDS |
| GAGGTTTCTGATTCCGATGA+TGG | 0.458312 | 7.4:+17686167 | None:intergenic |
| TTCACAACATTTCAACAAGA+AGG | 0.461145 | 7.4:-17686504 | MS.gene39059:CDS |
| GGCGAACCTGCAAGGAAGCT+TGG | 0.468064 | 7.4:-17685840 | MS.gene39059:CDS |
| TTCTCGAATGGAGGCTACAC+TGG | 0.476480 | 7.4:-17686575 | MS.gene39059:CDS |
| TCATATAAAGAGCTTTCCTT+AGG | 0.480215 | 7.4:+17685789 | None:intergenic |
| AATGAGATTCAATTCATCAA+TGG | 0.480428 | 7.4:+17686664 | None:intergenic |
| AAGCTTGGTTTGAAATACAT+TGG | 0.491787 | 7.4:-17685825 | MS.gene39059:CDS |
| AATGAAAGCGACGTTATGAT+TGG | 0.497226 | 7.4:-17685966 | MS.gene39059:CDS |
| CCTGAAAGCATTAACAAGAA+AGG | 0.500548 | 7.4:-17685732 | MS.gene39059:CDS |
| TCCTTGAAACGTTATTGTTG+TGG | 0.502883 | 7.4:+17686786 | None:intergenic |
| CTGAAAGCATTAACAAGAAA+GGG | 0.509340 | 7.4:-17685731 | MS.gene39059:CDS |
| AATTTCTTGCACTCCTTGTG+AGG | 0.519149 | 7.4:+17686148 | None:intergenic |
| TGGCTATGAAATTCATCCTA+AGG | 0.521370 | 7.4:-17685805 | MS.gene39059:CDS |
| AGGACTATTGAAGCTAGAAA+AGG | 0.521445 | 7.4:-17686767 | MS.gene39059:CDS |
| TTGGTTATTGTCTCTAGAAG+TGG | 0.526248 | 7.4:-17686107 | MS.gene39059:CDS |
| TAAAGCCCTATACTAGAAAG+TGG | 0.527288 | 7.4:-17686706 | MS.gene39059:CDS |
| TAGAAAAGGTGAAGATGAAG+AGG | 0.534977 | 7.4:-17686753 | MS.gene39059:CDS |
| AGACGAGGAAAGAGAAGCAC+AGG | 0.538907 | 7.4:-17686225 | MS.gene39059:CDS |
| TTCCATCAATGCGGAATCCA+CGG | 0.553948 | 7.4:+17686322 | None:intergenic |
| GAAATTCAGATAGATGAGAA+AGG | 0.555067 | 7.4:+17686426 | None:intergenic |
| AATGTCTTTATCTCCATCAT+CGG | 0.555784 | 7.4:-17686180 | MS.gene39059:CDS |
| GTTGTAGAGGAAGATTGAAG+AGG | 0.556992 | 7.4:+17686817 | None:intergenic |
| TGGACAAAGCTTATTCGCCT+CGG | 0.561151 | 7.4:-17686265 | MS.gene39059:CDS |
| ACATCACAACCTTGAACACT+AGG | 0.565753 | 7.4:+17686623 | None:intergenic |
| TGATACTTGAATATCATGAA+TGG | 0.565861 | 7.4:-17686472 | MS.gene39059:CDS |
| TTTGCTAGTGAAAATGGCAG+AGG | 0.583094 | 7.4:-17686060 | MS.gene39059:CDS |
| AATTCATGATGAACTAGCCG+TGG | 0.588732 | 7.4:-17686339 | MS.gene39059:CDS |
| ATGGGAAAATTCACAGTGGT+TGG | 0.595256 | 7.4:+17685583 | None:intergenic |
| AAAGCATTAACAAGAAAGGG+TGG | 0.599234 | 7.4:-17685728 | MS.gene39059:CDS |
| CTTATTACGGCGAACCTGCA+AGG | 0.602890 | 7.4:-17685848 | MS.gene39059:CDS |
| AAGCATTAACAAGAAAGGGT+GGG | 0.613905 | 7.4:-17685727 | MS.gene39059:CDS |
| GTGGATTCCGCATTGATGGA+AGG | 0.622255 | 7.4:-17686320 | MS.gene39059:CDS |
| AAAGTGGGAGACAAGTGTCA+TGG | 0.623072 | 7.4:-17686690 | MS.gene39059:CDS |
| TACTTGAATATCATGAATGG+TGG | 0.629903 | 7.4:-17686469 | MS.gene39059:CDS |
| AAAGCCCTATACTAGAAAGT+GGG | 0.635292 | 7.4:-17686705 | MS.gene39059:CDS |
| TCTGATATCTGTGTGATGAA+AGG | 0.641175 | 7.4:-17686863 | None:intergenic |
| TCTTCGCTAAAATTAATCGG+TGG | 0.642329 | 7.4:+17686404 | None:intergenic |
| TGTTGTGAAGTGATGTACAA+AGG | 0.651312 | 7.4:+17686518 | None:intergenic |
| TGTGGCTTACTGAGTTGTAG+AGG | 0.661330 | 7.4:+17686804 | None:intergenic |
| TTTGTTACCTTCCATCAATG+CGG | 0.673569 | 7.4:+17686313 | None:intergenic |
| GTGTATCACGAATTCAACGA+TGG | 0.678441 | 7.4:-17686548 | MS.gene39059:CDS |
| AAAAGGACTAATTCAAGACG+AGG | 0.679852 | 7.4:-17686240 | MS.gene39059:CDS |
| GCAGCCCAATTAGTACCAAG+AGG | 0.687233 | 7.4:+17685876 | None:intergenic |
| TCGGAATCAGAAACCTCACA+AGG | 0.728070 | 7.4:-17686161 | MS.gene39059:CDS |
| TGGAATGGGAAAATTCACAG+TGG | 0.794884 | 7.4:+17685579 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATCTTCGCTAAAATTAAT+CGG | + | chr7.4:17686043-17686062 | None:intergenic | 20.0% |
| !!! | TAAGGTCTAATTTAACATTT+TGG | + | chr7.4:17686768-17686787 | None:intergenic | 20.0% |
| ! | AATGAGATTCAATTCATCAA+TGG | + | chr7.4:17685780-17685799 | None:intergenic | 25.0% |
| ! | ATGTTAAATTAGACCTTAGA+AGG | - | chr7.4:17686770-17686789 | MS.gene39059:CDS | 25.0% |
| ! | ATTGAATCTCATTTCAAAGA+AGG | - | chr7.4:17685787-17685806 | MS.gene39059:CDS | 25.0% |
| ! | TGATACTTGAATATCATGAA+TGG | - | chr7.4:17685969-17685988 | MS.gene39059:CDS | 25.0% |
| AATGTCTTTATCTCCATCAT+CGG | - | chr7.4:17686261-17686280 | MS.gene39059:CDS | 30.0% | |
| ACCTCAAAAAACAACAGAAT+TGG | - | chr7.4:17686432-17686451 | MS.gene39059:CDS | 30.0% | |
| ACTTGAATGAACACAGATTT+AGG | + | chr7.4:17686541-17686560 | None:intergenic | 30.0% | |
| CTTTCTTGTTAATGCTTTCA+GGG | + | chr7.4:17686711-17686730 | None:intergenic | 30.0% | |
| GAAATTCAGATAGATGAGAA+AGG | + | chr7.4:17686018-17686037 | None:intergenic | 30.0% | |
| TACTTGAATATCATGAATGG+TGG | - | chr7.4:17685972-17685991 | MS.gene39059:CDS | 30.0% | |
| TCATATAAAGAGCTTTCCTT+AGG | + | chr7.4:17686655-17686674 | None:intergenic | 30.0% | |
| TTCACAACATTTCAACAAGA+AGG | - | chr7.4:17685937-17685956 | MS.gene39059:CDS | 30.0% | |
| ! | AAGCTTGGTTTGAAATACAT+TGG | - | chr7.4:17686616-17686635 | MS.gene39059:CDS | 30.0% |
| ! | CTAGAGACAATAACCAATTT+TGG | + | chr7.4:17686331-17686350 | None:intergenic | 30.0% |
| !! | CTGAAAGCATTAACAAGAAA+GGG | - | chr7.4:17686710-17686729 | MS.gene39059:CDS | 30.0% |
| !! | TGAGAATTTGCTAGTGAAAA+TGG | - | chr7.4:17686375-17686394 | MS.gene39059:CDS | 30.0% |
| !!! | ATGAATTTTGAGACCAACAA+TGG | + | chr7.4:17686089-17686108 | None:intergenic | 30.0% |
| !!! | TGTTGATTTCAGAAACCTTT+TGG | - | chr7.4:17686156-17686175 | MS.gene39059:CDS | 30.0% |
| AAAAGGACTAATTCAAGACG+AGG | - | chr7.4:17686201-17686220 | MS.gene39059:CDS | 35.0% | |
| AAAGCCCTATACTAGAAAGT+GGG | - | chr7.4:17685736-17685755 | MS.gene39059:CDS | 35.0% | |
| AAGCATTAACAAGAAAGGGT+GGG | - | chr7.4:17686714-17686733 | MS.gene39059:CDS | 35.0% | |
| AATGAAAGCGACGTTATGAT+TGG | - | chr7.4:17686475-17686494 | MS.gene39059:CDS | 35.0% | |
| AATTAGACCTTAGAAGGTTC+AGG | - | chr7.4:17686776-17686795 | MS.gene39059:CDS | 35.0% | |
| AGGACTATTGAAGCTAGAAA+AGG | - | chr7.4:17685674-17685693 | MS.gene39059:CDS | 35.0% | |
| CCTTTCTTGTTAATGCTTTC+AGG | + | chr7.4:17686712-17686731 | None:intergenic | 35.0% | |
| CTTATGAGTACACAGTTCTT+AGG | - | chr7.4:17686815-17686834 | MS.gene39059:CDS | 35.0% | |
| TAAAGCCCTATACTAGAAAG+TGG | - | chr7.4:17685735-17685754 | MS.gene39059:CDS | 35.0% | |
| TAGAAAAGGTGAAGATGAAG+AGG | - | chr7.4:17685688-17685707 | MS.gene39059:CDS | 35.0% | |
| TCCTTGAAACGTTATTGTTG+TGG | + | chr7.4:17685658-17685677 | None:intergenic | 35.0% | |
| TCTTCGCTAAAATTAATCGG+TGG | + | chr7.4:17686040-17686059 | None:intergenic | 35.0% | |
| TGGCTATGAAATTCATCCTA+AGG | - | chr7.4:17686636-17686655 | MS.gene39059:CDS | 35.0% | |
| TGTTCCTCTTGGTACTAATT+GGG | - | chr7.4:17686561-17686580 | MS.gene39059:CDS | 35.0% | |
| TGTTGTGAAGTGATGTACAA+AGG | + | chr7.4:17685926-17685945 | None:intergenic | 35.0% | |
| TTGTTCCTCTTGGTACTAAT+TGG | - | chr7.4:17686560-17686579 | MS.gene39059:CDS | 35.0% | |
| TTTGTTACCTTCCATCAATG+CGG | + | chr7.4:17686131-17686150 | None:intergenic | 35.0% | |
| ! | AAAGCATTAACAAGAAAGGG+TGG | - | chr7.4:17686713-17686732 | MS.gene39059:CDS | 35.0% |
| ! | TGAATTAGTCCTTTTATCCG+AGG | + | chr7.4:17686196-17686215 | None:intergenic | 35.0% |
| ! | TTGGTTATTGTCTCTAGAAG+TGG | - | chr7.4:17686334-17686353 | MS.gene39059:CDS | 35.0% |
| !! | AGGGCTTTATCTTTTCATGT+TGG | + | chr7.4:17685724-17685743 | None:intergenic | 35.0% |
| !! | CCTGAAAGCATTAACAAGAA+AGG | - | chr7.4:17686709-17686728 | MS.gene39059:CDS | 35.0% |
| !! | TTCATTCAAGTTGTTCCTCT+TGG | - | chr7.4:17686550-17686569 | MS.gene39059:CDS | 35.0% |
| !!! | GCCAATTCTGTTGTTTTTTG+AGG | + | chr7.4:17686436-17686455 | None:intergenic | 35.0% |
| AATTCATGATGAACTAGCCG+TGG | - | chr7.4:17686102-17686121 | MS.gene39059:CDS | 40.0% | |
| AATTTCTTGCACTCCTTGTG+AGG | + | chr7.4:17686296-17686315 | None:intergenic | 40.0% | |
| ACATCACAACCTTGAACACT+AGG | + | chr7.4:17685821-17685840 | None:intergenic | 40.0% | |
| ACCTTAGAAGGTTCAGGAAA+AGG | - | chr7.4:17686782-17686801 | MS.gene39059:CDS | 40.0% | |
| CTTTCAGGGTCTCTCAAAAT+AGG | + | chr7.4:17686697-17686716 | None:intergenic | 40.0% | |
| GCCACAACAATAACGTTTCA+AGG | - | chr7.4:17685654-17685673 | MS.gene39059:CDS | 40.0% | |
| GTGAAAATGGCAGAGGAAAT+TGG | - | chr7.4:17686388-17686407 | MS.gene39059:CDS | 40.0% | |
| GTGTATCACGAATTCAACGA+TGG | - | chr7.4:17685893-17685912 | MS.gene39059:CDS | 40.0% | |
| GTTGTAGAGGAAGATTGAAG+AGG | + | chr7.4:17685627-17685646 | None:intergenic | 40.0% | |
| TGCACGAACGAAACCAAAAT+TGG | - | chr7.4:17686315-17686334 | MS.gene39059:CDS | 40.0% | |
| TGGGCTGCAGATACTTATTA+CGG | - | chr7.4:17686580-17686599 | MS.gene39059:CDS | 40.0% | |
| TTTGCTAGTGAAAATGGCAG+AGG | - | chr7.4:17686381-17686400 | MS.gene39059:CDS | 40.0% | |
| ! | ACCTTTTCCTGAACCTTCTA+AGG | + | chr7.4:17686786-17686805 | None:intergenic | 40.0% |
| ! | GACGTTATGATTGGTGTTCA+TGG | - | chr7.4:17686484-17686503 | MS.gene39059:CDS | 40.0% |
| ! | GCGAATAAGCTTTGTCCAAA+AGG | + | chr7.4:17686174-17686193 | None:intergenic | 40.0% |
| ! | GTCTCCCACTTTCTAGTATA+GGG | + | chr7.4:17685743-17685762 | None:intergenic | 40.0% |
| ! | TGTCTCCCACTTTCTAGTAT+AGG | + | chr7.4:17685744-17685763 | None:intergenic | 40.0% |
| !! | GAATGGTGGATCACGAAATA+TGG | - | chr7.4:17685986-17686005 | MS.gene39059:CDS | 40.0% |
| !!! | GGCAGAGGAAATTGGTTTTA+AGG | - | chr7.4:17686396-17686415 | MS.gene39059:CDS | 40.0% |
| AAAGTGGGAGACAAGTGTCA+TGG | - | chr7.4:17685751-17685770 | MS.gene39059:CDS | 45.0% | |
| CCATTCGAGAAAAACACTGC+TGG | + | chr7.4:17685857-17685876 | None:intergenic | 45.0% | |
| GAGGTTTCTGATTCCGATGA+TGG | + | chr7.4:17686277-17686296 | None:intergenic | 45.0% | |
| GCTTATTCGCCTCGGATAAA+AGG | - | chr7.4:17686184-17686203 | MS.gene39059:CDS | 45.0% | |
| TCGGAATCAGAAACCTCACA+AGG | - | chr7.4:17686280-17686299 | MS.gene39059:CDS | 45.0% | |
| TGAGACCAACAATGGCTTCA+GGG | + | chr7.4:17686081-17686100 | None:intergenic | 45.0% | |
| TGGACAAAGCTTATTCGCCT+CGG | - | chr7.4:17686176-17686195 | MS.gene39059:CDS | 45.0% | |
| TGTGGCTTACTGAGTTGTAG+AGG | + | chr7.4:17685640-17685659 | None:intergenic | 45.0% | |
| TGTTTCCCTGAAGCCATTGT+TGG | - | chr7.4:17686073-17686092 | MS.gene39059:CDS | 45.0% | |
| TTCAAACCAAGCTTCCTTGC+AGG | + | chr7.4:17686610-17686629 | None:intergenic | 45.0% | |
| TTCCATCAATGCGGAATCCA+CGG | + | chr7.4:17686122-17686141 | None:intergenic | 45.0% | |
| TTGAGACCAACAATGGCTTC+AGG | + | chr7.4:17686082-17686101 | None:intergenic | 45.0% | |
| ! | CCAGCAGTGTTTTTCTCGAA+TGG | - | chr7.4:17685854-17685873 | MS.gene39059:CDS | 45.0% |
| ! | GCAGTGTTTTTCTCGAATGG+AGG | - | chr7.4:17685857-17685876 | MS.gene39059:CDS | 45.0% |
| CTTATTACGGCGAACCTGCA+AGG | - | chr7.4:17686593-17686612 | MS.gene39059:CDS | 50.0% | |
| GCAGCCCAATTAGTACCAAG+AGG | + | chr7.4:17686568-17686587 | None:intergenic | 50.0% | |
| GCGAATTCGCCTAGTGTTCA+AGG | - | chr7.4:17685809-17685828 | MS.gene39059:CDS | 50.0% | |
| TTCTCGAATGGAGGCTACAC+TGG | - | chr7.4:17685866-17685885 | MS.gene39059:CDS | 50.0% | |
| ! | AGACGAGGAAAGAGAAGCAC+AGG | - | chr7.4:17686216-17686235 | MS.gene39059:CDS | 50.0% |
| ! | GTGGATTCCGCATTGATGGA+AGG | - | chr7.4:17686121-17686140 | MS.gene39059:CDS | 50.0% |
| AGCCGTGGATTCCGCATTGA+TGG | - | chr7.4:17686117-17686136 | MS.gene39059:CDS | 55.0% | |
| GGCGAACCTGCAAGGAAGCT+TGG | - | chr7.4:17686601-17686620 | MS.gene39059:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 17685593 | 17686870 | 17685593 | ID=MS.gene39059 |
| chr7.4 | mRNA | 17685593 | 17686870 | 17685593 | ID=MS.gene39059.t1;Parent=MS.gene39059 |
| chr7.4 | exon | 17685593 | 17686870 | 17685593 | ID=MS.gene39059.t1.exon1;Parent=MS.gene39059.t1 |
| chr7.4 | CDS | 17685593 | 17686870 | 17685593 | ID=cds.MS.gene39059.t1;Parent=MS.gene39059.t1 |
| Gene Sequence |
| Protein sequence |
