AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053215

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053215.t1 MTR_4g007060 97.161 317 6 1 1 314 1 317 0.0 631
MS.gene053215.t1 MTR_4g007060 95.000 280 11 1 38 314 4 283 0.0 539
MS.gene053215.t1 MTR_4g007060 92.958 213 15 0 1 213 1 213 6.70e-116 334
MS.gene053215.t1 MTR_2g105060 57.716 324 112 9 4 314 5 316 2.15e-109 320
MS.gene053215.t1 MTR_2g105060 58.498 253 87 6 68 314 1 241 1.20e-86 260
MS.gene053215.t1 MTR_3g106060 47.302 315 122 13 7 311 6 286 3.88e-73 227
MS.gene053215.t1 MTR_1g013760 45.520 279 120 9 43 311 20 276 2.55e-62 199
MS.gene053215.t1 MTR_4g007060 95.726 117 5 0 44 160 10 126 2.93e-44 149
MS.gene053215.t1 MTR_1g013790 37.500 264 128 6 45 307 6 233 1.86e-42 147
MS.gene053215.t1 MTR_7g110720 31.046 306 155 9 51 307 100 398 2.85e-37 138
MS.gene053215.t1 MTR_7g110720 30.952 294 144 8 51 307 100 371 1.80e-35 132
MS.gene053215.t1 MTR_2g023930 34.649 228 102 5 43 223 139 366 8.92e-35 133
MS.gene053215.t1 MTR_4g132430 29.365 252 138 5 6 223 77 322 2.63e-31 122
MS.gene053215.t1 MTR_3g053330 33.654 208 93 5 145 307 234 441 1.23e-29 117
MS.gene053215.t1 MTR_2g088000 25.000 380 162 7 51 307 173 552 1.71e-27 112
MS.gene053215.t1 MTR_4g132430 48.276 87 45 0 137 223 102 188 2.88e-27 109
MS.gene053215.t1 MTR_4g094412 54.762 84 31 2 140 222 217 294 2.09e-26 108
MS.gene053215.t1 MTR_4g094412 54.762 84 31 2 140 222 226 303 2.12e-26 108
MS.gene053215.t1 MTR_4g107970 57.500 80 32 2 143 222 161 238 1.59e-25 106
MS.gene053215.t1 MTR_7g009730 56.098 82 34 2 139 220 198 277 1.83e-25 106
MS.gene053215.t1 MTR_4g107970 57.500 80 32 2 143 222 238 315 2.53e-25 106
MS.gene053215.t1 MTR_4g049760 50.000 84 42 0 139 222 267 350 2.82e-25 106
MS.gene053215.t1 MTR_2g045360 41.284 109 64 0 137 245 186 294 8.79e-25 103
MS.gene053215.t1 MTR_4g049790 33.136 169 70 4 121 265 290 439 7.75e-22 96.3
MS.gene053215.t1 MTR_5g016610 43.200 125 58 4 95 219 145 256 1.39e-21 92.4
MS.gene053215.t1 MTR_2g033820 58.065 62 25 1 161 222 202 262 5.90e-20 89.7
MS.gene053215.t1 MTR_7g079010 42.241 116 56 4 112 220 87 198 1.17e-19 86.3
MS.gene053215.t1 MTR_4g094908 60.000 60 24 0 160 219 264 323 1.19e-19 88.2
MS.gene053215.t1 MTR_1g086790 56.452 62 26 1 161 222 157 217 2.06e-19 87.4
MS.gene053215.t1 MTR_5g094430 57.143 63 26 1 160 222 228 289 4.74e-19 87.4
MS.gene053215.t1 MTR_5g094430 50.000 60 28 2 163 222 67 124 1.85e-12 67.8
MS.gene053215.t1 MTR_5g094430 57.143 63 26 1 160 222 250 311 5.93e-19 87.0
MS.gene053215.t1 MTR_5g094430 50.000 60 28 2 163 222 89 146 2.03e-12 67.8
MS.gene053215.t1 MTR_5g094430 57.143 63 26 1 160 222 362 423 6.11e-19 87.4
MS.gene053215.t1 MTR_5g094430 50.000 60 28 2 163 222 201 258 2.16e-12 67.8
MS.gene053215.t1 MTR_7g109800 39.655 116 59 4 133 248 126 230 7.87e-19 85.5
MS.gene053215.t1 MTR_3g031220 40.157 127 60 5 120 238 315 433 8.26e-19 87.0
MS.gene053215.t1 MTR_3g031220 53.333 60 26 2 163 222 199 256 1.64e-15 77.4
MS.gene053215.t1 MTR_5g074400 52.055 73 30 2 160 232 418 485 1.24e-18 86.7
MS.gene053215.t1 MTR_5g074400 53.333 60 26 2 163 222 244 301 1.69e-15 77.4
MS.gene053215.t1 MTR_3g056100 57.143 63 26 1 160 222 256 317 1.26e-18 86.3
MS.gene053215.t1 MTR_3g056100 50.000 60 28 2 163 222 100 157 3.02e-12 67.4
MS.gene053215.t1 MTR_3g056100 57.143 63 26 1 160 222 400 461 1.28e-18 86.7
MS.gene053215.t1 MTR_3g056100 50.000 60 28 2 163 222 244 301 3.28e-12 67.4
MS.gene053215.t1 MTR_3g056100 57.143 63 26 1 160 222 413 474 1.35e-18 86.7
MS.gene053215.t1 MTR_3g056100 50.000 60 28 2 163 222 244 301 3.44e-12 67.4
MS.gene053215.t1 MTR_3g056100 57.143 63 26 1 160 222 269 330 1.40e-18 86.3
MS.gene053215.t1 MTR_3g056100 50.000 60 28 2 163 222 100 157 3.12e-12 67.4
MS.gene053215.t1 MTR_1g009613 52.778 72 32 1 150 219 248 319 1.54e-18 85.1
MS.gene053215.t1 MTR_3g104750 54.098 61 27 1 160 220 102 161 1.72e-18 81.6
MS.gene053215.t1 MTR_1g015140 52.459 61 28 1 160 220 100 159 3.13e-18 80.9
MS.gene053215.t1 MTR_5g097490 51.948 77 34 3 146 222 238 311 3.18e-18 84.7
MS.gene053215.t1 MTR_5g097490 44.444 63 33 2 160 222 90 150 3.11e-11 63.9
MS.gene053215.t1 MTR_4g094588 51.613 62 29 1 161 222 177 237 3.55e-18 84.0
MS.gene053215.t1 MTR_4g127040 43.299 97 51 2 125 221 212 304 3.71e-18 83.6
MS.gene053215.t1 MTR_2g032030 49.367 79 39 1 157 234 261 339 4.48e-18 84.7
MS.gene053215.t1 MTR_2g032030 49.367 79 39 1 157 234 261 339 4.50e-18 84.7
MS.gene053215.t1 MTR_7g071120 39.806 103 57 3 160 262 322 419 6.12e-18 84.3
MS.gene053215.t1 MTR_7g071120 50.820 61 28 2 162 222 166 224 6.22e-14 72.4
MS.gene053215.t1 MTR_7g100510 52.381 63 29 1 160 222 359 420 8.84e-18 83.6
MS.gene053215.t1 MTR_7g100510 50.725 69 32 2 163 231 190 256 1.24e-16 80.5
MS.gene053215.t1 MTR_1g070455 53.125 64 30 0 160 223 291 354 1.19e-17 82.8
MS.gene053215.t1 MTR_5g042920 52.381 63 29 1 160 222 318 379 1.91e-17 82.8
MS.gene053215.t1 MTR_5g042920 53.333 60 26 2 163 222 152 209 6.60e-14 72.4
MS.gene053215.t1 MTR_7g028415 52.459 61 28 1 160 220 91 150 4.04e-17 77.8
MS.gene053215.t1 MTR_7g028710 52.459 61 28 1 160 220 91 150 4.04e-17 77.8
MS.gene053215.t1 MTR_7g109600 47.761 67 35 0 163 229 54 120 6.01e-17 79.3
MS.gene053215.t1 MTR_3g009470 53.968 63 28 1 160 222 493 554 6.57e-17 81.6
MS.gene053215.t1 MTR_3g009470 48.571 70 34 2 154 223 272 339 1.32e-14 74.7
MS.gene053215.t1 MTR_4g082580 52.381 63 29 1 160 222 276 337 7.68e-17 80.9
MS.gene053215.t1 MTR_4g082580 50.000 60 29 1 163 222 146 204 6.34e-12 66.2
MS.gene053215.t1 MTR_5g091390 49.231 65 32 1 161 225 156 219 1.02e-16 79.7
MS.gene053215.t1 MTR_4g130900 32.203 177 97 5 92 252 288 457 1.05e-16 80.9
MS.gene053215.t1 MTR_4g013260 52.381 63 29 1 160 222 334 395 1.14e-16 80.5
MS.gene053215.t1 MTR_4g013260 35.593 118 70 3 162 275 184 299 1.45e-15 77.4
MS.gene053215.t1 MTR_7g080000 39.806 103 56 3 125 222 390 491 1.61e-16 80.5
MS.gene053215.t1 MTR_7g080000 46.774 62 31 2 161 222 233 292 7.58e-11 63.5
MS.gene053215.t1 MTR_8g096730 47.541 61 31 1 160 220 68 127 1.75e-16 75.5
MS.gene053215.t1 MTR_7g011820 53.333 60 27 1 160 219 408 466 2.11e-16 80.1
MS.gene053215.t1 MTR_7g011820 51.613 62 26 3 163 222 229 288 8.96e-13 68.9
MS.gene053215.t1 MTR_8g028565 46.479 71 38 0 163 233 156 226 3.42e-16 78.6
MS.gene053215.t1 MTR_4g047580 32.673 101 64 1 139 235 258 358 4.22e-16 79.0
MS.gene053215.t1 MTR_8g098945 44.444 81 41 1 163 239 130 210 4.25e-16 77.4
MS.gene053215.t1 MTR_7g080020 52.381 63 29 1 160 222 491 552 8.05e-16 78.6
MS.gene053215.t1 MTR_7g080020 49.180 61 29 2 162 222 280 338 1.59e-11 65.5
MS.gene053215.t1 MTR_3g031220 53.333 60 26 2 163 222 199 256 8.60e-16 77.8
MS.gene053215.t1 MTR_8g087000 50.000 60 30 0 163 222 78 137 9.05e-16 75.9
MS.gene053215.t1 MTR_8g087000 50.000 60 30 0 163 222 77 136 9.27e-16 75.9
MS.gene053215.t1 MTR_2g024350 35.556 135 75 4 162 288 8 138 1.37e-15 75.1
MS.gene053215.t1 MTR_1g077780 47.619 63 32 1 160 222 60 121 1.42e-15 73.2
MS.gene053215.t1 MTR_3g095040 50.794 63 30 1 160 222 116 177 2.01e-15 73.9
MS.gene053215.t1 MTR_4g122530 48.387 62 31 1 161 222 207 267 2.16e-15 76.6
MS.gene053215.t1 MTR_8g092010 50.794 63 30 1 160 222 106 167 2.28e-15 73.6
MS.gene053215.t1 MTR_3g108960 46.269 67 36 0 160 226 312 378 2.70e-15 76.3
MS.gene053215.t1 MTR_7g079040 33.333 120 78 1 160 277 152 271 2.79e-15 75.5
MS.gene053215.t1 MTR_5g043880 49.153 59 29 1 161 219 123 180 2.85e-15 75.1
MS.gene053215.t1 MTR_2g024380 49.180 61 31 0 162 222 251 311 3.76e-15 76.3
MS.gene053215.t1 MTR_2g016770 45.902 61 33 0 163 223 36 96 4.61e-15 73.2
MS.gene053215.t1 MTR_2g016770 45.902 61 33 0 163 223 28 88 5.50e-15 72.8
MS.gene053215.t1 MTR_8g092140 43.836 73 39 2 147 219 146 216 6.60e-15 73.2
MS.gene053215.t1 MTR_8g007270 50.000 60 29 1 160 219 152 210 7.27e-15 72.8
MS.gene053215.t1 MTR_3g095080 48.333 60 30 1 160 219 166 224 9.31e-15 72.8
MS.gene053215.t1 MTR_3g009470 50.000 66 31 2 158 223 276 339 9.61e-15 75.1
MS.gene053215.t1 MTR_3g095080 48.333 60 30 1 160 219 142 200 1.03e-14 72.4
MS.gene053215.t1 MTR_1g099600 43.056 72 41 0 163 234 186 257 1.85e-14 73.2
MS.gene053215.t1 MTR_7g062220 50.820 61 29 1 163 223 125 184 2.54e-14 72.8
MS.gene053215.t1 MTR_0117s0040 46.667 60 32 0 160 219 72 131 5.07e-14 70.9
MS.gene053215.t1 MTR_2g083870 48.333 60 31 0 163 222 81 140 1.63e-13 69.7
MS.gene053215.t1 MTR_5g044695 42.593 54 31 0 137 190 52 105 4.06e-12 62.4
MS.gene053215.t1 MTR_5g097500 36.264 91 49 3 149 239 217 298 4.60e-12 66.2
MS.gene053215.t1 MTR_8g067650 46.032 63 34 0 160 222 337 399 1.46e-11 65.5
MS.gene053215.t1 MTR_8g067635 46.032 63 34 0 160 222 347 409 1.49e-11 65.5
MS.gene053215.t1 MTR_6g053200 42.424 66 38 0 157 222 325 390 3.70e-11 64.3
MS.gene053215.t1 MTR_8g069935 42.623 61 35 0 162 222 331 391 4.67e-11 63.5
MS.gene053215.t1 MTR_1g078260 43.662 71 36 3 150 219 237 304 6.50e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053215.t1 AT1G80840 51.724 319 120 7 4 314 6 298 1.86e-96 287
MS.gene053215.t1 AT4G31800 45.260 327 141 5 1 311 1 305 7.34e-80 245
MS.gene053215.t1 AT2G25000 41.748 309 131 7 12 314 4 269 4.07e-64 204
MS.gene053215.t1 AT4G31800 44.615 260 108 4 68 311 1 240 4.02e-62 197
MS.gene053215.t1 AT2G25000 43.657 268 104 6 51 314 2 226 4.61e-60 192
MS.gene053215.t1 AT2G25000 43.657 268 104 6 51 314 2 226 4.61e-60 192
MS.gene053215.t1 AT2G25000 43.820 267 103 6 51 313 24 247 2.74e-59 191
MS.gene053215.t1 AT4G31800 48.837 215 92 3 1 199 1 213 8.78e-57 184
MS.gene053215.t1 AT1G62300 30.686 277 126 7 50 260 159 435 2.01e-32 126
MS.gene053215.t1 AT4G01720 31.683 202 112 3 48 223 99 300 7.75e-28 113
MS.gene053215.t1 AT4G04450 37.500 160 74 4 129 262 165 324 1.82e-27 111
MS.gene053215.t1 AT4G04450 37.500 160 74 4 129 262 259 418 4.53e-27 111
MS.gene053215.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.11e-27 110
MS.gene053215.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.11e-27 110
MS.gene053215.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.11e-27 110
MS.gene053215.t1 AT4G22070 51.220 82 40 0 142 223 277 358 8.11e-27 110
MS.gene053215.t1 AT1G68150 53.571 84 32 2 140 222 218 295 2.61e-25 104
MS.gene053215.t1 AT1G18860 61.290 62 24 0 161 222 238 299 3.50e-24 102
MS.gene053215.t1 AT5G15130 52.564 78 37 0 145 222 168 245 4.60e-24 102
MS.gene053215.t1 AT5G15130 52.564 78 37 0 145 222 210 287 4.95e-24 102
MS.gene053215.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.79e-21 90.9
MS.gene053215.t1 AT5G07100 38.053 113 60 3 163 274 25 128 5.45e-16 75.9
MS.gene053215.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.79e-21 90.9
MS.gene053215.t1 AT5G07100 38.053 113 60 3 163 274 25 128 5.45e-16 75.9
MS.gene053215.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.79e-21 90.9
MS.gene053215.t1 AT5G07100 38.053 113 60 3 163 274 25 128 5.45e-16 75.9
MS.gene053215.t1 AT5G07100 36.806 144 83 5 79 222 65 200 1.79e-21 90.9
MS.gene053215.t1 AT5G07100 38.053 113 60 3 163 274 25 128 5.45e-16 75.9
MS.gene053215.t1 AT5G07100 36.806 144 83 5 79 222 158 293 3.01e-21 92.4
MS.gene053215.t1 AT5G07100 38.053 113 60 3 163 274 118 221 3.74e-15 75.1
MS.gene053215.t1 AT2G04880 50.617 81 31 2 160 240 281 352 4.90e-21 93.6
MS.gene053215.t1 AT2G04880 44.444 63 33 2 160 222 109 169 4.57e-13 69.7
MS.gene053215.t1 AT2G04880 50.617 81 31 2 160 240 305 376 5.17e-21 93.6
MS.gene053215.t1 AT2G04880 44.444 63 33 2 160 222 109 169 4.72e-13 69.7
MS.gene053215.t1 AT5G13080 43.269 104 56 2 117 220 24 124 7.39e-20 84.7
MS.gene053215.t1 AT4G31550 40.351 114 64 2 119 232 207 316 7.90e-20 88.6
MS.gene053215.t1 AT1G69810 27.273 264 123 7 26 222 3 264 1.08e-19 89.0
MS.gene053215.t1 AT2G30590 39.091 110 63 2 114 223 269 374 1.94e-19 88.2
MS.gene053215.t1 AT1G29860 44.828 87 38 2 161 238 135 220 2.30e-19 86.7
MS.gene053215.t1 AT4G31550 52.055 73 35 0 160 232 243 315 3.16e-19 87.0
MS.gene053215.t1 AT2G38470 45.652 92 45 2 160 251 360 446 3.96e-19 88.2
MS.gene053215.t1 AT2G38470 54.098 61 26 2 162 222 184 242 6.10e-16 78.6
MS.gene053215.t1 AT1G69810 44.828 87 45 2 137 222 122 206 5.10e-19 86.3
MS.gene053215.t1 AT2G23320 57.895 57 24 0 163 219 241 297 6.71e-19 85.9
MS.gene053215.t1 AT2G24570 41.748 103 56 2 119 221 204 302 1.02e-18 85.5
MS.gene053215.t1 AT1G55600 59.016 61 24 1 163 223 308 367 1.52e-18 86.3
MS.gene053215.t1 AT5G26170 53.333 60 27 1 160 219 111 169 2.39e-18 81.3
MS.gene053215.t1 AT5G56270 55.556 63 27 1 160 222 485 546 3.43e-18 85.5
MS.gene053215.t1 AT5G56270 27.542 236 147 5 43 272 161 378 1.16e-14 75.1
MS.gene053215.t1 AT3G04670 41.584 101 55 2 119 219 223 319 3.82e-18 84.0
MS.gene053215.t1 AT5G49520 53.226 62 28 1 161 222 220 280 3.93e-18 84.7
MS.gene053215.t1 AT4G18170 51.613 62 29 1 161 222 171 231 5.02e-18 83.6
MS.gene053215.t1 AT3G62340 50.685 73 35 1 159 231 115 186 5.29e-18 82.8
MS.gene053215.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.59e-18 84.0
MS.gene053215.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.30e-12 68.2
MS.gene053215.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.59e-18 84.0
MS.gene053215.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.30e-12 68.2
MS.gene053215.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.59e-18 84.0
MS.gene053215.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.30e-12 68.2
MS.gene053215.t1 AT4G26640 55.556 63 27 1 160 222 203 264 5.59e-18 84.0
MS.gene053215.t1 AT4G26640 41.250 80 45 2 152 231 25 102 1.30e-12 68.2
MS.gene053215.t1 AT4G24240 44.318 88 45 2 132 219 255 338 5.94e-18 83.6
MS.gene053215.t1 AT1G13960 53.968 63 28 1 160 222 254 315 6.67e-18 83.6
MS.gene053215.t1 AT1G13960 56.452 62 24 3 163 224 77 135 1.33e-15 77.0
MS.gene053215.t1 AT1G13960 55.000 60 26 1 160 219 407 465 7.67e-18 84.3
MS.gene053215.t1 AT1G13960 56.452 62 24 3 163 224 230 288 1.31e-15 77.8
MS.gene053215.t1 AT5G28650 41.584 101 55 2 119 219 223 319 7.86e-18 83.2
MS.gene053215.t1 AT1G64000 39.796 98 54 3 132 229 88 180 8.06e-18 80.5
MS.gene053215.t1 AT4G26640 55.556 63 27 1 160 222 379 440 8.45e-18 84.3
MS.gene053215.t1 AT4G26640 41.250 80 45 2 152 231 201 278 1.91e-12 68.2
MS.gene053215.t1 AT4G26640 56.667 60 25 1 160 219 339 397 8.55e-18 84.0
MS.gene053215.t1 AT4G26640 43.662 71 38 2 152 222 161 229 2.09e-12 67.8
MS.gene053215.t1 AT4G26640 55.556 63 27 1 160 222 307 368 8.92e-18 84.0
MS.gene053215.t1 AT4G26640 41.250 80 45 2 152 231 129 206 2.00e-12 67.8
MS.gene053215.t1 AT1G29280 51.667 60 29 0 163 222 75 134 9.13e-18 81.6
MS.gene053215.t1 AT5G41570 46.753 77 38 2 144 220 82 155 9.32e-18 80.1
MS.gene053215.t1 AT2G03340 53.968 63 28 1 160 222 413 474 1.12e-17 84.0
MS.gene053215.t1 AT2G03340 50.000 72 34 2 163 234 251 320 2.97e-15 76.6
MS.gene053215.t1 AT2G47260 54.839 62 27 1 161 222 173 233 2.28e-17 81.6
MS.gene053215.t1 AT5G46350 42.697 89 47 2 161 246 182 269 2.42e-17 81.6
MS.gene053215.t1 AT2G30250 43.750 96 45 4 133 222 295 387 3.17e-17 82.0
MS.gene053215.t1 AT2G30250 48.333 60 29 2 163 222 167 224 6.10e-12 66.2
MS.gene053215.t1 AT2G37260 45.977 87 44 3 136 222 58 141 5.04e-17 80.9
MS.gene053215.t1 AT2G37260 35.135 111 58 3 116 219 220 323 5.18e-15 75.1
MS.gene053215.t1 AT2G37260 45.977 87 44 3 136 222 60 143 5.07e-17 80.9
MS.gene053215.t1 AT2G37260 35.135 111 58 3 116 219 222 325 5.20e-15 75.1
MS.gene053215.t1 AT3G01080 52.381 63 29 1 160 222 342 403 5.09e-17 81.6
MS.gene053215.t1 AT3G01080 51.667 60 27 2 163 222 206 263 1.71e-12 68.2
MS.gene053215.t1 AT3G01080 52.381 63 29 1 160 222 304 365 5.42e-17 81.3
MS.gene053215.t1 AT3G01080 51.667 60 27 2 163 222 168 225 1.81e-12 67.8
MS.gene053215.t1 AT2G37260 45.977 87 44 3 136 222 140 223 6.34e-17 81.3
MS.gene053215.t1 AT2G37260 35.135 111 58 3 116 219 302 405 5.75e-15 75.5
MS.gene053215.t1 AT3G01970 53.333 60 27 1 160 219 63 121 8.82e-17 76.3
MS.gene053215.t1 AT1G69310 52.542 59 27 1 161 219 146 203 1.18e-16 79.0
MS.gene053215.t1 AT1G69310 52.542 59 27 1 161 219 146 203 1.18e-16 79.0
MS.gene053215.t1 AT1G69310 52.542 59 27 1 161 219 146 203 1.18e-16 79.0
MS.gene053215.t1 AT4G30935 45.946 74 38 2 149 222 319 390 1.50e-16 80.5
MS.gene053215.t1 AT2G21900 49.254 67 33 1 156 222 103 168 1.63e-16 77.0
MS.gene053215.t1 AT2G34830 35.115 131 75 2 109 230 154 283 1.69e-16 80.1
MS.gene053215.t1 AT2G34830 35.115 131 75 2 109 230 163 292 1.79e-16 80.1
MS.gene053215.t1 AT4G01250 45.070 71 39 0 163 233 129 199 4.44e-16 77.8
MS.gene053215.t1 AT1G30650 45.833 72 39 0 159 230 214 285 6.76e-16 78.2
MS.gene053215.t1 AT5G64810 37.000 100 60 2 120 219 70 166 1.20e-15 74.3
MS.gene053215.t1 AT5G52830 37.963 108 64 1 163 267 166 273 1.35e-15 76.6
MS.gene053215.t1 AT5G43290 41.176 85 48 2 135 219 88 170 1.56e-15 75.9
MS.gene053215.t1 AT2G44745 48.571 70 33 2 160 229 143 209 1.99e-15 74.3
MS.gene053215.t1 AT4G26440 52.381 63 29 1 160 222 370 431 2.46e-15 77.0
MS.gene053215.t1 AT4G26440 47.541 61 30 2 163 223 179 237 2.35e-12 67.8
MS.gene053215.t1 AT2G46130 50.820 61 29 1 160 220 28 87 4.06e-15 70.9
MS.gene053215.t1 AT3G58710 46.154 78 38 1 163 240 71 144 6.15e-15 73.9
MS.gene053215.t1 AT3G58710 46.154 78 38 1 163 240 72 145 6.22e-15 73.9
MS.gene053215.t1 AT4G39410 50.000 60 29 1 160 219 221 279 6.85e-15 74.3
MS.gene053215.t1 AT5G45050 30.405 148 89 3 83 230 976 1109 1.41e-14 75.1
MS.gene053215.t1 AT5G45050 30.405 148 89 3 83 230 1115 1248 1.42e-14 75.1
MS.gene053215.t1 AT5G45050 30.405 148 89 3 83 230 1087 1220 1.46e-14 75.1
MS.gene053215.t1 AT5G45260 35.833 120 70 3 121 238 1172 1286 9.34e-14 72.4
MS.gene053215.t1 AT4G23550 38.667 75 46 0 160 234 138 212 4.14e-13 69.3
MS.gene053215.t1 AT1G69310 50.847 59 24 2 161 219 146 199 9.24e-13 67.8
MS.gene053215.t1 AT3G01080 51.667 60 27 2 163 222 206 263 1.28e-12 67.8
MS.gene053215.t1 AT3G32090 46.753 77 34 2 180 249 76 152 3.13e-12 64.7
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.05e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.10e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.10e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.10e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 400 482 1.16e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.16e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.19e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.22e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.22e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.23e-11 66.2
MS.gene053215.t1 AT4G12020 38.824 85 50 2 161 245 467 549 1.85e-11 65.5
MS.gene053215.t1 AT2G46130 49.180 61 26 2 160 220 28 83 3.14e-11 59.7

Find 62 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATAAGCTCTTGAAATTT+TGG 0.096984 4.2:+92551281 None:intergenic
ACAAGTGCTGCTCTAAAATT+TGG 0.202946 4.2:+92550244 None:intergenic
ACCTAAGGTACCAAAGAATT+TGG 0.225108 4.2:-92550299 MS.gene053215:CDS
TGCAGCCATTTCAGGAAAAT+TGG 0.259692 4.2:-92550221 MS.gene053215:CDS
GCACTTGTTGCAGCCATTTC+AGG 0.268706 4.2:-92550229 MS.gene053215:CDS
GGATATCATTGGAGGAAATA+TGG 0.293100 4.2:-92550964 MS.gene053215:CDS
ATTTGTTCCACCAAATTCTT+TGG 0.303785 4.2:+92550289 None:intergenic
CACTTTGAGAAGTCATTTGA+TGG 0.316280 4.2:-92551478 MS.gene053215:CDS
ATTTCAGTCCATCGATGAAT+TGG 0.333220 4.2:-92551577 MS.gene053215:intron
AACCTTAGAAAACAAGAAAT+TGG 0.335631 4.2:-92551535 MS.gene053215:CDS
AATAACAATAGTAATTTGAT+TGG 0.348469 4.2:-92551384 MS.gene053215:CDS
AACTTCTTCATGAGCTCTAT+AGG 0.350958 4.2:+92552321 None:intergenic
CCACAGTTCGGTACCTTGTT+CGG 0.368882 4.2:-92550422 MS.gene053215:CDS
GATGTGCTTACTTCTTTCTC+AGG 0.378143 4.2:+92551438 None:intergenic
GAGTCAAGTGTAACCACTTT+TGG 0.384251 4.2:+92550376 None:intergenic
AAATTTCAAGAGCTTATGTT+AGG 0.384990 4.2:-92551278 MS.gene053215:CDS
ACCAAATTCTTTGGTACCTT+AGG 0.394330 4.2:+92550298 None:intergenic
ACTTCTTCATGAGCTCTATA+GGG 0.416190 4.2:+92552322 None:intergenic
AAAGAATTTGGTGGAACAAA+TGG 0.417985 4.2:-92550287 MS.gene053215:CDS
ATCATATATCAACACTTCCT+TGG 0.423806 4.2:-92552359 MS.gene053215:CDS
ATTGAGTCAACATCAGGTTC+TGG 0.432635 4.2:-92550457 MS.gene053215:CDS
ATGCTTGTTGCTACTTATGA+AGG 0.438838 4.2:-92550508 MS.gene053215:CDS
AGGACTGAAGCTTCTGATAC+AGG 0.439171 4.2:-92551258 MS.gene053215:CDS
CCTGATGTTGACTCAATTTG+AGG 0.440623 4.2:+92550463 None:intergenic
GAGCATTTGAAATAAGCTCT+TGG 0.448164 4.2:+92550913 None:intergenic
TAAGCACATCATCAAAGAAA+AGG 0.475073 4.2:-92551425 MS.gene053215:CDS
GACTCAATTTGAGGAGGTTG+AGG 0.489379 4.2:+92550472 None:intergenic
CTCATCTTTCACAGCAAAGT+TGG 0.495364 4.2:+92552157 None:intergenic
TTGAAATAAGCTCTTGGACA+AGG 0.504759 4.2:+92550919 None:intergenic
CCTCAAATTGAGTCAACATC+AGG 0.509933 4.2:-92550463 MS.gene053215:CDS
AATTTGATTGGAATTAACAA+TGG 0.518843 4.2:-92551372 MS.gene053215:CDS
TGTTTATTTATAGAAGAAAG+AGG 0.523025 4.2:-92552210 MS.gene053215:intron
TTGTGAAGGATGGATATCAT+TGG 0.540562 4.2:-92550975 MS.gene053215:CDS
TCTTGGACAAGGGTTATCTC+TGG 0.540970 4.2:+92550930 None:intergenic
CCGAACTGTGGTTCACGCTA+CGG 0.542637 4.2:+92550434 None:intergenic
AATTGGAGGAGGAATTGAGA+AGG 0.543648 4.2:-92551560 MS.gene053215:CDS
TGAAATAAGCTCTTGGACAA+GGG 0.544753 4.2:+92550920 None:intergenic
TCAGTCCATCGATGAATTGG+AGG 0.547121 4.2:-92551574 MS.gene053215:intron
GGGAATAATGTTGAGATCCA+AGG 0.551140 4.2:+92552342 None:intergenic
TAAGGTACCAAAGAATTTGG+TGG 0.555336 4.2:-92550296 MS.gene053215:CDS
CTCACCAGCAGCACCAAAAG+TGG 0.557520 4.2:-92550389 MS.gene053215:CDS
TTCCTCCTCCAATTCATCGA+TGG 0.559559 4.2:+92551569 None:intergenic
CTTAGAAAACAAGAAATTGG+TGG 0.564034 4.2:-92551532 MS.gene053215:CDS
ATTGGAGGAGGAATTGAGAA+GGG 0.565937 4.2:-92551559 MS.gene053215:CDS
TGCTTGTTGCTACTTATGAA+GGG 0.570383 4.2:-92550507 MS.gene053215:CDS
CCGTAGCGTGAACCACAGTT+CGG 0.575774 4.2:-92550434 MS.gene053215:CDS
GTCCATCGATGAATTGGAGG+AGG 0.577129 4.2:-92551571 MS.gene053215:CDS
TGAAGGATGGATATCATTGG+AGG 0.578215 4.2:-92550972 MS.gene053215:CDS
TTTCTTACACGATTCTTCAT+CGG 0.585904 4.2:+92551329 None:intergenic
AAGAATCGTGTAAGAAACCA+AGG 0.593473 4.2:-92551323 MS.gene053215:CDS
GAGGTGAGTGACGCCGAACA+AGG 0.597975 4.2:+92550409 None:intergenic
TTCATAAGTAGCAACAAGCA+TGG 0.599378 4.2:+92550510 None:intergenic
GCTTGTTGCTACTTATGAAG+GGG 0.612450 4.2:-92550506 MS.gene053215:CDS
AGCAAAGTTGGTCATCCCCA+AGG 0.617875 4.2:+92552169 None:intergenic
TTCATCGGTAGAGCTACTCT+CGG 0.622483 4.2:+92551344 None:intergenic
ACCAAGAAAAGATTCACCTA+AGG 0.630943 4.2:-92550314 MS.gene053215:CDS
TTATTTATAGAAGAAAGAGG+TGG 0.649581 4.2:-92552207 MS.gene053215:intron
GATGTTGACTCAATTTGAGG+AGG 0.679037 4.2:+92550466 None:intergenic
CCGAACAAGGTACCGAACTG+TGG 0.683983 4.2:+92550422 None:intergenic
CAACTTTGCTGTGAAAGATG+AGG 0.688649 4.2:-92552156 MS.gene053215:intron
ATTGGTGGAAATGCTCTCAG+TGG 0.691318 4.2:-92551517 MS.gene053215:CDS
AGAATCGTGTAAGAAACCAA+GGG 0.696308 4.2:-92551322 MS.gene053215:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATTATTTATTTATTC+AGG - chr4.2:92552020-92552039 MS.gene053215:intron 10.0%
!! AATAACAATAGTAATTTGAT+TGG - chr4.2:92551193-92551212 MS.gene053215:intron 15.0%
!! AATCATCAATTATTAATTCA+AGG + chr4.2:92550842-92550861 None:intergenic 15.0%
!! ATCATCAATTATTAATTCAA+GGG + chr4.2:92550841-92550860 None:intergenic 15.0%
!!! ATATCAATTTTTATACTTAC+AGG + chr4.2:92550282-92550301 None:intergenic 15.0%
!! AATAGAGAAATATACATAAG+TGG + chr4.2:92550525-92550544 None:intergenic 20.0%
!! AATTTGATTGGAATTAACAA+TGG - chr4.2:92551205-92551224 MS.gene053215:intron 20.0%
!! TAAACAAGTTATAGCTTATA+TGG + chr4.2:92550699-92550718 None:intergenic 20.0%
!! TGTTTATTTATAGAAGAAAG+AGG - chr4.2:92550367-92550386 MS.gene053215:CDS 20.0%
!!! AAATTTGTTAAAGTCATGTT+TGG + chr4.2:92551773-92551792 None:intergenic 20.0%
!!! TTTTGTTTATTAGTCCATTA+TGG - chr4.2:92550913-92550932 MS.gene053215:CDS 20.0%
!!! TTTTTACTTTTTAGCCAAAA+GGG + chr4.2:92550944-92550963 None:intergenic 20.0%
! AAATTTCAAGAGCTTATGTT+AGG - chr4.2:92551299-92551318 MS.gene053215:CDS 25.0%
! AACCTTAGAAAACAAGAAAT+TGG - chr4.2:92551042-92551061 MS.gene053215:intron 25.0%
! ACTAAAGTTTGTATAAGTGT+TGG - chr4.2:92551542-92551561 MS.gene053215:CDS 25.0%
! AGCATTTGATAAACGTAATT+TGG + chr4.2:92551967-92551986 None:intergenic 25.0%
! ATAATCACCATTCAAACTAA+TGG + chr4.2:92550894-92550913 None:intergenic 25.0%
! TGTAAGTTAAGTATCTTACA+AGG + chr4.2:92551345-92551364 None:intergenic 25.0%
! TTATTTATAGAAGAAAGAGG+TGG - chr4.2:92550370-92550389 MS.gene053215:CDS 25.0%
!! AACATAAGCTCTTGAAATTT+TGG + chr4.2:92551299-92551318 None:intergenic 25.0%
!! AACCAAAATTGTTTTCAGTT+CGG + chr4.2:92551469-92551488 None:intergenic 25.0%
!! TTAATATTTTCTTCTTCCCT+TGG + chr4.2:92551274-92551293 None:intergenic 25.0%
!! TTTGATACCATTAGTTTGAA+TGG - chr4.2:92550884-92550903 MS.gene053215:CDS 25.0%
!! TTTTCTTGGTTCAATATTCT+TGG + chr4.2:92552253-92552272 None:intergenic 25.0%
!!! GTTTTTACTTTTTAGCCAAA+AGG + chr4.2:92550945-92550964 None:intergenic 25.0%
!!! TGTTTTAAAAACCGAACAAA+TGG + chr4.2:92551511-92551530 None:intergenic 25.0%
ATAGTGCATACTTCAACAAT+TGG + chr4.2:92550612-92550631 None:intergenic 30.0%
ATCATATATCAACACTTCCT+TGG - chr4.2:92550218-92550237 MS.gene053215:CDS 30.0%
ATTTGTTCCACCAAATTCTT+TGG + chr4.2:92552291-92552310 None:intergenic 30.0%
CTTAGAAAACAAGAAATTGG+TGG - chr4.2:92551045-92551064 MS.gene053215:intron 30.0%
CTTGTTTACATAAGCTATCT+TGG - chr4.2:92550711-92550730 MS.gene053215:intron 30.0%
GTCAGTAGATAAACTCAAAT+AGG - chr4.2:92550801-92550820 MS.gene053215:intron 30.0%
TAAGCACATCATCAAAGAAA+AGG - chr4.2:92551152-92551171 MS.gene053215:intron 30.0%
TTTCTTACACGATTCTTCAT+CGG + chr4.2:92551251-92551270 None:intergenic 30.0%
! AAAGAATTTGGTGGAACAAA+TGG - chr4.2:92552290-92552309 MS.gene053215:intron 30.0%
! AACCGAACTGAAAACAATTT+TGG - chr4.2:92551464-92551483 MS.gene053215:CDS 30.0%
! ATGCTCTTGTTTGAAATGTT+TGG - chr4.2:92550322-92550341 MS.gene053215:CDS 30.0%
!! ATCGCTTTTGCGTATATTTA+GGG + chr4.2:92551378-92551397 None:intergenic 30.0%
!!! CACCAATTTCTTGTTTTCTA+AGG + chr4.2:92551047-92551066 None:intergenic 30.0%
!!! CGATGTTTTAAAAACCAAAC+CGG - chr4.2:92551394-92551413 MS.gene053215:CDS 30.0%
AACTGGTTGAACCATTTGTT+CGG - chr4.2:92551497-92551516 MS.gene053215:CDS 35.0%
AACTTCTTCATGAGCTCTAT+AGG + chr4.2:92550259-92550278 None:intergenic 35.0%
AAGAATCGTGTAAGAAACCA+AGG - chr4.2:92551254-92551273 MS.gene053215:CDS 35.0%
AATTATGCGTATGCCATGTT+TGG - chr4.2:92550467-92550486 MS.gene053215:CDS 35.0%
ACCAAATTCTTTGGTACCTT+AGG + chr4.2:92552282-92552301 None:intergenic 35.0%
ACCAAGAAAAGATTCACCTA+AGG - chr4.2:92552263-92552282 MS.gene053215:intron 35.0%
ACCATTAAAAACTCCAAGGA+TGG - chr4.2:92551424-92551443 MS.gene053215:CDS 35.0%
ACTTCTTCATGAGCTCTATA+GGG + chr4.2:92550258-92550277 None:intergenic 35.0%
AGAATCGTGTAAGAAACCAA+GGG - chr4.2:92551255-92551274 MS.gene053215:CDS 35.0%
ATTTCAGTCCATCGATGAAT+TGG - chr4.2:92551000-92551019 MS.gene053215:intron 35.0%
GGATATCATTGGAGGAAATA+TGG - chr4.2:92551613-92551632 MS.gene053215:intron 35.0%
TCGAACCATTAAAAACTCCA+AGG - chr4.2:92551420-92551439 MS.gene053215:CDS 35.0%
TGAAATAAGCTCTTGGACAA+GGG + chr4.2:92551660-92551679 None:intergenic 35.0%
TTAAGCAGTCTATCCAAACA+TGG + chr4.2:92550483-92550502 None:intergenic 35.0%
TTCATAAGTAGCAACAAGCA+TGG + chr4.2:92552070-92552089 None:intergenic 35.0%
TTGAAATAAGCTCTTGGACA+AGG + chr4.2:92551661-92551680 None:intergenic 35.0%
TTGTGAAGGATGGATATCAT+TGG - chr4.2:92551602-92551621 MS.gene053215:intron 35.0%
! ACCTAAGGTACCAAAGAATT+TGG - chr4.2:92552278-92552297 MS.gene053215:intron 35.0%
! ACCTTAGGTGAATCTTTTCT+TGG + chr4.2:92552267-92552286 None:intergenic 35.0%
! AGCTTTACCTTCTTTTTGAC+AGG + chr4.2:92551706-92551725 None:intergenic 35.0%
! ATGCTTGTTGCTACTTATGA+AGG - chr4.2:92552069-92552088 MS.gene053215:intron 35.0%
! CACTTTGAGAAGTCATTTGA+TGG - chr4.2:92551099-92551118 MS.gene053215:intron 35.0%
! GAGCATTTGAAATAAGCTCT+TGG + chr4.2:92551667-92551686 None:intergenic 35.0%
! GCTTTACCTTCTTTTTGACA+GGG + chr4.2:92551705-92551724 None:intergenic 35.0%
! GTTTTTAATGGTTCGATGTC+CGG + chr4.2:92551416-92551435 None:intergenic 35.0%
! TAAGGTACCAAAGAATTTGG+TGG - chr4.2:92552281-92552300 MS.gene053215:intron 35.0%
! TCTGTGTTTTCAGATTGTGA+AGG - chr4.2:92551588-92551607 MS.gene053215:intron 35.0%
! TGCTTGTTGCTACTTATGAA+GGG - chr4.2:92552070-92552089 MS.gene053215:intron 35.0%
! TGTTTTCAGATTGTGAAGGA+TGG - chr4.2:92551592-92551611 MS.gene053215:intron 35.0%
!! AAAGCAACTTTTTCTCCTTG+GGG - chr4.2:92550393-92550412 MS.gene053215:CDS 35.0%
!! ACAAGTGCTGCTCTAAAATT+TGG + chr4.2:92552336-92552355 None:intergenic 35.0%
!! CATCGCTTTTGCGTATATTT+AGG + chr4.2:92551379-92551398 None:intergenic 35.0%
!! GAAAGCAACTTTTTCTCCTT+GGG - chr4.2:92550392-92550411 MS.gene053215:CDS 35.0%
!! TCGCTTTTGCGTATATTTAG+GGG + chr4.2:92551377-92551396 None:intergenic 35.0%
AAATCTTCGTAGTGCACGTT+TGG + chr4.2:92551993-92552012 None:intergenic 40.0%
AATTGGAGGAGGAATTGAGA+AGG - chr4.2:92551017-92551036 MS.gene053215:intron 40.0%
ATTGAGTCAACATCAGGTTC+TGG - chr4.2:92552120-92552139 MS.gene053215:intron 40.0%
ATTGGAGGAGGAATTGAGAA+GGG - chr4.2:92551018-92551037 MS.gene053215:intron 40.0%
CCAAAAGGGTCATTCCATAA+TGG + chr4.2:92550930-92550949 None:intergenic 40.0%
CCTCAAATTGAGTCAACATC+AGG - chr4.2:92552114-92552133 MS.gene053215:intron 40.0%
CTCATCTTTCACAGCAAAGT+TGG + chr4.2:92550423-92550442 None:intergenic 40.0%
GATGTGCTTACTTCTTTCTC+AGG + chr4.2:92551142-92551161 None:intergenic 40.0%
GGGAATAATGTTGAGATCCA+AGG + chr4.2:92550238-92550257 None:intergenic 40.0%
TGAAGGATGGATATCATTGG+AGG - chr4.2:92551605-92551624 MS.gene053215:intron 40.0%
TGCAGCCATTTCAGGAAAAT+TGG - chr4.2:92552356-92552375 MS.gene053215:CDS 40.0%
! CAACTTTGCTGTGAAAGATG+AGG - chr4.2:92550421-92550440 MS.gene053215:CDS 40.0%
! CCATTATGGAATGACCCTTT+TGG - chr4.2:92550927-92550946 MS.gene053215:CDS 40.0%
! GAGTCAAGTGTAACCACTTT+TGG + chr4.2:92552204-92552223 None:intergenic 40.0%
! GCCATCCTTGGAGTTTTTAA+TGG + chr4.2:92551428-92551447 None:intergenic 40.0%
! GCTTGTTGCTACTTATGAAG+GGG - chr4.2:92552071-92552090 MS.gene053215:intron 40.0%
! GTGCACCAATTTTCCTGAAA+TGG + chr4.2:92552364-92552383 None:intergenic 40.0%
!! CCTGATGTTGACTCAATTTG+AGG + chr4.2:92552117-92552136 None:intergenic 40.0%
!! GATGTTGACTCAATTTGAGG+AGG + chr4.2:92552114-92552133 None:intergenic 40.0%
!! GGAAAGCAACTTTTTCTCCT+TGG - chr4.2:92550391-92550410 MS.gene053215:CDS 40.0%
!!! ATTTTGGTTCACAGCTCAAC+TGG - chr4.2:92551480-92551499 MS.gene053215:CDS 40.0%
!!! GAACAGTTTTAAGCCATCCT+TGG + chr4.2:92551440-92551459 None:intergenic 40.0%
AAGCTGCCCTGTCAAAAAGA+AGG - chr4.2:92551696-92551715 MS.gene053215:intron 45.0%
AGGACTGAAGCTTCTGATAC+AGG - chr4.2:92551319-92551338 MS.gene053215:CDS 45.0%
ATTGGTGGAAATGCTCTCAG+TGG - chr4.2:92551060-92551079 MS.gene053215:intron 45.0%
GACTCAATTTGAGGAGGTTG+AGG + chr4.2:92552108-92552127 None:intergenic 45.0%
TAATGGTTCGATGTCCGGTT+TGG + chr4.2:92551411-92551430 None:intergenic 45.0%
TCAGTCCATCGATGAATTGG+AGG - chr4.2:92551003-92551022 MS.gene053215:intron 45.0%
TCTTGGACAAGGGTTATCTC+TGG + chr4.2:92551650-92551669 None:intergenic 45.0%
TTCATCGGTAGAGCTACTCT+CGG + chr4.2:92551236-92551255 None:intergenic 45.0%
TTCCTCCTCCAATTCATCGA+TGG + chr4.2:92551011-92551030 None:intergenic 45.0%
! TTCTTTTTGACAGGGCAGCT+TGG + chr4.2:92551697-92551716 None:intergenic 45.0%
CCACAGTTCGGTACCTTGTT+CGG - chr4.2:92552155-92552174 MS.gene053215:intron 50.0%
GTCCATCGATGAATTGGAGG+AGG - chr4.2:92551006-92551025 MS.gene053215:intron 50.0%
! AGCAAAGTTGGTCATCCCCA+AGG + chr4.2:92550411-92550430 None:intergenic 50.0%
! GCACTTGTTGCAGCCATTTC+AGG - chr4.2:92552348-92552367 MS.gene053215:CDS 50.0%
!!! GTAACCACTTTTGGTGCTGC+TGG + chr4.2:92552195-92552214 None:intergenic 50.0%
CCGAACTGTGGTTCACGCTA+CGG + chr4.2:92552146-92552165 None:intergenic 55.0%
CCGTAGCGTGAACCACAGTT+CGG - chr4.2:92552143-92552162 MS.gene053215:intron 55.0%
CTCACCAGCAGCACCAAAAG+TGG - chr4.2:92552188-92552207 MS.gene053215:CDS 55.0%
!! CCGAACAAGGTACCGAACTG+TGG + chr4.2:92552158-92552177 None:intergenic 55.0%
!!! CACTTTTGGTGCTGCTGGTG+AGG + chr4.2:92552190-92552209 None:intergenic 55.0%
GAGGTGAGTGACGCCGAACA+AGG + chr4.2:92552171-92552190 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 92550207 92552392 92550207 ID=MS.gene053215
chr4.2 mRNA 92550207 92552392 92550207 ID=MS.gene053215.t1;Parent=MS.gene053215
chr4.2 exon 92552318 92552392 92552318 ID=MS.gene053215.t1.exon1;Parent=MS.gene053215.t1
chr4.2 CDS 92552318 92552392 92552318 ID=cds.MS.gene053215.t1;Parent=MS.gene053215.t1
chr4.2 exon 92552157 92552219 92552157 ID=MS.gene053215.t1.exon2;Parent=MS.gene053215.t1
chr4.2 CDS 92552157 92552219 92552157 ID=cds.MS.gene053215.t1;Parent=MS.gene053215.t1
chr4.2 exon 92551254 92551592 92551254 ID=MS.gene053215.t1.exon3;Parent=MS.gene053215.t1
chr4.2 CDS 92551254 92551592 92551254 ID=cds.MS.gene053215.t1;Parent=MS.gene053215.t1
chr4.2 exon 92550882 92550998 92550882 ID=MS.gene053215.t1.exon4;Parent=MS.gene053215.t1
chr4.2 CDS 92550882 92550998 92550882 ID=cds.MS.gene053215.t1;Parent=MS.gene053215.t1
chr4.2 exon 92550207 92550557 92550207 ID=MS.gene053215.t1.exon5;Parent=MS.gene053215.t1
chr4.2 CDS 92550207 92550557 92550207 ID=cds.MS.gene053215.t1;Parent=MS.gene053215.t1
Gene Sequence

>MS.gene053215

ATGGATTGTTCATCATATATCAACACTTCCTTGGATCTCAACATTATTCCCTATAGAGCTCATGAAGAAGTTCCTGTAAGTATAAAAATTGATATATATATATATGCACTTTCACATGCTCTTGTTTGAAATGTTTGGCTCACAATATTTTCATTGTTTGTGTTTATTTATAGAAGAAAGAGGTGGAAAGCAACTTTTTCTCCTTGGGGATGACCAACTTTGCTGTGAAAGATGAGGTTAGTTTAGTTTAACAATTGTTGAATTATGCGTATGCCATGTTTGGATAGACTGCTTAATTAGATGTTTATAGTAGAACCACTTATGTATATTTCTCTATTACAAAAAGATTGAAAAAGTTCAAATTGTTTTCATAAGTTATCTTAGAGACTTAGTTTAGTTTAGCCAATTGTTGAAGTATGCACTATTTAGATAAAGATCTTAATTATGCACTATTTCTAATACTAAAGATGAAATAAAATAAAATTGTTTCCATATAAGCTATAACTTGTTTACATAAGCTATCTTGGAAAGCTTTTGAACATATATCATAAGTTGTTTTCTTAAGCTATCTAAAACAATTGCACAAGTGCTTATGTCAGTAGATAAACTCAAATAGGTCGATTCAAGCGTGCCCTTGAATTAATAATTGATGATTAATTGCACATAGCTATTTCATATTTGATACCATTAGTTTGAATGGTGATTATTTTGTTTATTAGTCCATTATGGAATGACCCTTTTGGCTAAAAAGTAAAAACTCTTAAATGATTCTAACATATGCTATTGATTTCAAATTTCAGTCCATCGATGAATTGGAGGAGGAATTGAGAAGGGTAACCTTAGAAAACAAGAAATTGGTGGAAATGCTCTCAGTGGTTTGTGAGAATTACAACACTTTGAGAAGTCATTTGATGGAATACATGAAGAGAAATCCTGAGAAAGAAGTAAGCACATCATCAAAGAAAAGGAAATCTGAAAGCAGCAATAATAACAATAGTAATTTGATTGGAATTAACAATGGAAATTCCGAGAGTAGCTCTACCGATGAAGAATCGTGTAAGAAACCAAGGGAAGAAGAAAATATTAAAGCCAAAATTTCAAGAGCTTATGTTAGGACTGAAGCTTCTGATACAGGCCTTGTAAGATACTTAACTTACATTTATTATTCCCCTAAATATACGCAAAAGCGATGTTTTAAAAACCAAACCGGACATCGAACCATTAAAAACTCCAAGGATGGCTTAAAACTGTTCAAATAACCGAACTGAAAACAATTTTGGTTCACAGCTCAACTGGTTGAACCATTTGTTCGGTTTTTAAAACATTCTTGAAAATACTAAAGTTTGTATAAGTGTTGGAGTTTGACATGTTTTTTTTTCTTTCTGTGTTTTCAGATTGTGAAGGATGGATATCATTGGAGGAAATATGGACAAAAAGTGACCAGAGATAACCCTTGTCCAAGAGCTTATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTAAAGCTAAGTTCTAACTTTTGATTAAGTGCGTGTTTGCTTTTACGTCTTACCAAACATGACTTTAACAAATTTGATTTTGTCTCGAAGCATATGTTTGACTAGAAAAGATAAATAGTATCGTCTGCGTTGAGTTGAAAAATTTACACTACTTTTCATATCAAAAACACATCATATTCATAGTGAAAATCAAACATGCTTAAGCTACTTTACTTCAATCTCGATGATAATGAATTAAATTCTATTCCAAATTACGTTTATCAAATGCTCATCCAAACGTGCACTACGAAGATTTTTCTCATTTTTGATTATTTATTTATTCAGGTGCAAAGAAGTGTTGATGATCAATCCATGCTTGTTGCTACTTATGAAGGGGAGCACAATCATCCTCAACCTCCTCAAATTGAGTCAACATCAGGTTCTGGCCGTAGCGTGAACCACAGTTCGGTACCTTGTTCGGCGTCACTCACCTCACCAGCAGCACCAAAAGTGGTTACACTTGACTCAACAACTTCTAAGAATAGTAAAGATTCCAAGAATATTGAACCAAGAAAAGATTCACCTAAGGTACCAAAGAATTTGGTGGAACAAATGGCTACTTCATTGACAACTGATCCAAATTTTAGAGCAGCACTTGTTGCAGCCATTTCAGGAAAATTGGTGCACAATAATTAA
Protein sequence

>MS.gene053215.t1

MDCSSYINTSLDLNIIPYRAHEEVPKKEVESNFFSLGMTNFAVKDESIDELEEELRRVTLENKKLVEMLSVVCENYNTLRSHLMEYMKRNPEKEVSTSSKKRKSESSNNNNSNLIGINNGNSESSSTDEESCKKPREEENIKAKISRAYVRTEASDTGLIVKDGYHWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSMLVATYEGEHNHPQPPQIESTSGSGRSVNHSSVPCSASLTSPAAPKVVTLDSTTSKNSKDSKNIEPRKDSPKVPKNLVEQMATSLTTDPNFRAALVAAISGKLVHNN