Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39071.t1 | XP_003625106.2 | 85.4 | 718 | 60 | 3 | 2 | 718 | 4 | 677 | 0.00E+00 | 1196 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39071.t1 | Q6ZQF0 | 24.1 | 490 | 284 | 15 | 11 | 481 | 9 | 429 | 4.8e-25 | 117.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39071.t1 | G7KSM4 | 85.4 | 718 | 60 | 3 | 2 | 718 | 4 | 677 | 0.0e+00 | 1196.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057314 | MS.gene39071 | 0.804145 | 2.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39071.t1 | MTR_7g090980 | 85.376 | 718 | 60 | 3 | 2 | 718 | 4 | 677 | 0.0 | 1242 |
| MS.gene39071.t1 | MTR_7g090980 | 83.457 | 538 | 45 | 2 | 181 | 718 | 1 | 494 | 0.0 | 894 |
| MS.gene39071.t1 | MTR_1g029630 | 69.124 | 502 | 119 | 3 | 3 | 503 | 5 | 471 | 0.0 | 711 |
| MS.gene39071.t1 | MTR_1g029630 | 67.331 | 502 | 118 | 3 | 3 | 503 | 5 | 461 | 0.0 | 688 |
| MS.gene39071.t1 | MTR_7g091020 | 90.698 | 258 | 20 | 1 | 423 | 680 | 1 | 254 | 8.54e-160 | 461 |
| MS.gene39071.t1 | MTR_7g091010 | 66.667 | 57 | 15 | 2 | 254 | 310 | 34 | 86 | 1.46e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39071.t1 | AT1G77320 | 44.387 | 579 | 255 | 10 | 2 | 573 | 4 | 522 | 3.81e-146 | 451 |
| MS.gene39071.t1 | AT1G77320 | 44.387 | 579 | 255 | 10 | 2 | 573 | 4 | 522 | 4.69e-146 | 452 |
| MS.gene39071.t1 | AT1G77320 | 43.005 | 579 | 246 | 11 | 2 | 573 | 4 | 505 | 7.44e-136 | 424 |
Find 137 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATGGTTCTTCCTTTCTC+TGG | 0.215900 | 7.4:-17771447 | MS.gene39071:CDS |
| GCAATGTTAGGTCCTCTTTA+TGG | 0.223719 | 7.4:-17768385 | MS.gene39071:CDS |
| TGAGGAGGATTGTAAGTCTA+AGG | 0.252399 | 7.4:-17768314 | MS.gene39071:CDS |
| CTCTGTGCCCTCTTTGAATA+TGG | 0.262226 | 7.4:+17768046 | None:intergenic |
| TCATAGTCACAATATTAATA+TGG | 0.282443 | 7.4:+17770016 | None:intergenic |
| TCTGCCTCTTTAACAAATAA+TGG | 0.288281 | 7.4:+17769537 | None:intergenic |
| TTGAGCACCTCCTGTTCTTC+AGG | 0.291121 | 7.4:+17768010 | None:intergenic |
| GCAGCAAGTGAAGGCTTGTT+TGG | 0.291299 | 7.4:+17772931 | None:intergenic |
| CAAATTTGTCAGGCGGAAAT+AGG | 0.302662 | 7.4:+17773604 | None:intergenic |
| GCAATGAATTGAACTTTAAT+CGG | 0.302946 | 7.4:-17769488 | MS.gene39071:CDS |
| CATAGCCAGGAAAAGGATAT+TGG | 0.309491 | 7.4:-17769684 | MS.gene39071:CDS |
| CATAAAATTTACAACCTGTT+TGG | 0.315540 | 7.4:+17771400 | None:intergenic |
| AGATGAATTAATGATTGAAA+TGG | 0.324358 | 7.4:-17772558 | MS.gene39071:CDS |
| GATGAATTAATGATTGAAAT+GGG | 0.328140 | 7.4:-17772557 | MS.gene39071:CDS |
| TATTTGATAGAATTGTAAAA+AGG | 0.328779 | 7.4:+17771217 | None:intergenic |
| AACCATTCATAAGTAACTAT+TGG | 0.328810 | 7.4:+17771513 | None:intergenic |
| AAGTAACTATTGGTTTCTTC+AGG | 0.330112 | 7.4:+17771523 | None:intergenic |
| GTATAAGACGGCAAAACTTT+GGG | 0.339519 | 7.4:-17770040 | MS.gene39071:CDS |
| GTCTTATACTTATCACCTTC+AGG | 0.351041 | 7.4:+17770054 | None:intergenic |
| CTTCACTTGCTGCTTAACTA+TGG | 0.356671 | 7.4:-17772921 | MS.gene39071:CDS |
| GAAAAGCTTATTCTACAAAA+TGG | 0.360168 | 7.4:-17771296 | MS.gene39071:CDS |
| TTATGTCTTGCAGTGGGCTT+TGG | 0.361969 | 7.4:-17771550 | MS.gene39071:intron |
| AATGGAGAAGCTAAGTAATA+TGG | 0.365938 | 7.4:-17769379 | MS.gene39071:CDS |
| ATTAAAGTTCAATTCATTGC+TGG | 0.372968 | 7.4:+17769491 | None:intergenic |
| GATAAAGATCCACTCTCAAC+AGG | 0.374142 | 7.4:+17769741 | None:intergenic |
| AAGAAAGCAATGGAGGCATT+TGG | 0.384504 | 7.4:-17768253 | MS.gene39071:CDS |
| TGTTCCTCAAGAGTCATATA+TGG | 0.385478 | 7.4:-17771463 | MS.gene39071:CDS |
| ACGGATAGCATGTCTGAATA+AGG | 0.387128 | 7.4:-17769772 | MS.gene39071:intron |
| TATCATTTAAATACAAGCAT+TGG | 0.401217 | 7.4:+17769337 | None:intergenic |
| AGTATAAGACGGCAAAACTT+TGG | 0.402788 | 7.4:-17770041 | MS.gene39071:CDS |
| CAGCAAGTGAAGGCTTGTTT+GGG | 0.403127 | 7.4:+17772932 | None:intergenic |
| ATCATTTAAATACAAGCATT+GGG | 0.405407 | 7.4:+17769338 | None:intergenic |
| TGTTTGGGCTCCAGAGTATA+AGG | 0.415227 | 7.4:-17772480 | MS.gene39071:intron |
| ATATGGTTCTTCCTTTCTCT+GGG | 0.421830 | 7.4:-17771446 | MS.gene39071:CDS |
| TTAATATTGTGACTATGAAA+TGG | 0.422555 | 7.4:-17770011 | MS.gene39071:CDS |
| GATTGCAGAATATCACTTGT+TGG | 0.423098 | 7.4:-17769417 | MS.gene39071:CDS |
| AATTCATTGCTGGTCTGTAA+TGG | 0.425432 | 7.4:+17769501 | None:intergenic |
| ATAGCCAGGAAAAGGATATT+GGG | 0.436818 | 7.4:-17769683 | MS.gene39071:CDS |
| TGTTCCATTATTTGTTAAAG+AGG | 0.438999 | 7.4:-17769541 | MS.gene39071:CDS |
| GTCATCAGACTCAGAATCAT+TGG | 0.439386 | 7.4:+17769458 | None:intergenic |
| AACCAATAGTTACTTATGAA+TGG | 0.439724 | 7.4:-17771515 | MS.gene39071:CDS |
| TTTAAAGATCTAAAATCCTT+CGG | 0.447916 | 7.4:-17773382 | MS.gene39071:CDS |
| GAATAGACTCACATTTCTGT+TGG | 0.448184 | 7.4:+17769288 | None:intergenic |
| TAATAATCAACCTGAAGAAC+AGG | 0.454496 | 7.4:-17768020 | MS.gene39071:CDS |
| AAAGAAGAATCTAGGAATGA+AGG | 0.461492 | 7.4:-17768566 | MS.gene39071:CDS |
| CTTGAATGATCCGGTTAGAA+AGG | 0.471395 | 7.4:-17768188 | MS.gene39071:CDS |
| ATTACGCTGTTAAAACCTCT+TGG | 0.471475 | 7.4:-17769013 | MS.gene39071:CDS |
| TGAGGCTTATAAGCTTTATG+AGG | 0.472144 | 7.4:-17768332 | MS.gene39071:CDS |
| GATGACTTGAGGGCAATGTT+AGG | 0.472838 | 7.4:-17768397 | MS.gene39071:CDS |
| AGAACCGCATCAAATTTGTC+AGG | 0.474476 | 7.4:+17773594 | None:intergenic |
| CACTGTACCGTTGTAGAACA+TGG | 0.481410 | 7.4:+17768958 | None:intergenic |
| CAATGAATTGAACTTTAATC+GGG | 0.484868 | 7.4:-17769487 | MS.gene39071:CDS |
| CTCAACAGCGCAACATAGCC+AGG | 0.485889 | 7.4:-17769697 | MS.gene39071:CDS |
| AGTTGGTGGAGGCATCCAAT+AGG | 0.485896 | 7.4:-17768594 | MS.gene39071:CDS |
| TGGCTTTGATGCGGATCAAA+AGG | 0.486466 | 7.4:-17772876 | MS.gene39071:intron |
| AAGATGTCGAAGTTATTTGA+AGG | 0.489072 | 7.4:-17773651 | MS.gene39071:CDS |
| GGAGATGGAATATGTAAGAA+TGG | 0.493834 | 7.4:-17768422 | MS.gene39071:CDS |
| TCCTTCGGCTGTAAGATGAT+TGG | 0.494775 | 7.4:-17773367 | MS.gene39071:intron |
| GCGCGTTTGCTTCGAGATTG+CGG | 0.499064 | 7.4:-17768470 | MS.gene39071:CDS |
| GCAATGCTCAGATGAGCATC+AGG | 0.499805 | 7.4:-17771487 | MS.gene39071:CDS |
| ATTTGAATCTGCGGCTCTTG+AGG | 0.500270 | 7.4:+17769641 | None:intergenic |
| TTCAGATAAGCGCAAAGAGA+TGG | 0.504618 | 7.4:-17771318 | MS.gene39071:intron |
| TGTTACGTACTTGAATGATC+CGG | 0.504932 | 7.4:-17768197 | MS.gene39071:CDS |
| GATATTGGGATAATGCAATC+TGG | 0.505586 | 7.4:-17769669 | MS.gene39071:CDS |
| TATCTTCACGTAACGTGACT+AGG | 0.506059 | 7.4:-17769722 | MS.gene39071:CDS |
| AGTAATATGGTGCGTAAAGG+TGG | 0.506996 | 7.4:-17769366 | MS.gene39071:CDS |
| TGTGTGACTGGAATCCAAAC+AGG | 0.507328 | 7.4:-17771414 | MS.gene39071:intron |
| AACTAGTATATTTGAATCTG+CGG | 0.510360 | 7.4:+17769632 | None:intergenic |
| AGGATCTACATTTAAAGACT+TGG | 0.512293 | 7.4:+17769602 | None:intergenic |
| ATCTCTAAGCATCATGAGAT+GGG | 0.513813 | 7.4:-17768280 | MS.gene39071:CDS |
| GGGTTAAAGATCTGTGTGAC+TGG | 0.518889 | 7.4:-17771426 | MS.gene39071:CDS |
| AAACATTGAGAACCACTTCA+AGG | 0.518932 | 7.4:-17768164 | MS.gene39071:CDS |
| AAGAATGGACGATGACTTGA+GGG | 0.519266 | 7.4:-17768407 | MS.gene39071:CDS |
| GCTGTCAAAATACTTGCCTC+TGG | 0.520073 | 7.4:-17772896 | MS.gene39071:CDS |
| GGCTTATAAGCTTTATGAGG+AGG | 0.520574 | 7.4:-17768329 | MS.gene39071:CDS |
| GGAATTAAAGAGACGACAAA+AGG | 0.520847 | 7.4:-17768449 | MS.gene39071:CDS |
| TGTTAAAACCTCTTGGCTTG+AGG | 0.521313 | 7.4:-17769006 | MS.gene39071:CDS |
| TGAATTAATGATTGAAATGG+GGG | 0.522521 | 7.4:-17772555 | MS.gene39071:CDS |
| TTCTGCAATCTGCTAAATAC+CGG | 0.522822 | 7.4:+17769430 | None:intergenic |
| AACATTGAGAACCACTTCAA+GGG | 0.524205 | 7.4:-17768163 | MS.gene39071:CDS |
| ATGTACCAGACCTTATACTC+TGG | 0.528773 | 7.4:+17772470 | None:intergenic |
| AGCGCAACATAGCCAGGAAA+AGG | 0.529842 | 7.4:-17769691 | MS.gene39071:CDS |
| CAGATCTTTAACCCAGAGAA+AGG | 0.530794 | 7.4:+17771435 | None:intergenic |
| GTGAAGGCTTGTTTGGGCAG+AGG | 0.531750 | 7.4:+17772938 | None:intergenic |
| CATCTCTAAGCATCATGAGA+TGG | 0.536901 | 7.4:-17768281 | MS.gene39071:CDS |
| GTTCTTCAATGTGCTAAAGA+AGG | 0.540178 | 7.4:-17772965 | MS.gene39071:CDS |
| CACTTGCTGCTTAACTATGG+AGG | 0.540521 | 7.4:-17772918 | MS.gene39071:CDS |
| AGTTGACGCACATAGTAGTC+GGG | 0.543297 | 7.4:-17769314 | MS.gene39071:CDS |
| CTAAGTAATATGGTGCGTAA+AGG | 0.550132 | 7.4:-17769369 | MS.gene39071:CDS |
| ATGAATTAATGATTGAAATG+GGG | 0.551763 | 7.4:-17772556 | MS.gene39071:CDS |
| TTGATTATGCTGCTTCTCGT+AGG | 0.553243 | 7.4:-17768504 | MS.gene39071:CDS |
| AGATGTCGAAGTTATTTGAA+GGG | 0.554510 | 7.4:-17773650 | MS.gene39071:CDS |
| CTGAGTCTGATGACAATGAC+CGG | 0.572569 | 7.4:-17769449 | MS.gene39071:CDS |
| AGATCCACTCTCAACAGGGT+TGG | 0.574398 | 7.4:+17769746 | None:intergenic |
| AAGTTGACGCACATAGTAGT+CGG | 0.576552 | 7.4:-17769315 | MS.gene39071:CDS |
| TTGACCGCCGTTCTCTTCAA+CGG | 0.577697 | 7.4:+17773566 | None:intergenic |
| GCGGAAATAGGTGTCGCGAT+AGG | 0.579534 | 7.4:+17773616 | None:intergenic |
| GAGGAGGATTGTAAGTCTAA+GGG | 0.581483 | 7.4:-17768313 | MS.gene39071:CDS |
| TTCAATGTGCTAAAGAAGGA+AGG | 0.584964 | 7.4:-17772961 | MS.gene39071:CDS |
| TCAAAATCATCCCCTTGAAG+TGG | 0.585463 | 7.4:+17768152 | None:intergenic |
| TAAGAATGGACGATGACTTG+AGG | 0.588663 | 7.4:-17768408 | MS.gene39071:CDS |
| AATATGGTGCGTAAAGGTGG+AGG | 0.590391 | 7.4:-17769363 | MS.gene39071:CDS |
| ACGACAAAAGGAGATGGAGA+TGG | 0.591211 | 7.4:-17768437 | MS.gene39071:CDS |
| CTCAAAGCCGTTGAAGAGAA+CGG | 0.591219 | 7.4:-17773573 | MS.gene39071:CDS |
| AAAGAGACGACAAAAGGAGA+TGG | 0.591489 | 7.4:-17768443 | MS.gene39071:CDS |
| GTAGTGAAAACTGTTGCTCT+AGG | 0.594407 | 7.4:-17769041 | MS.gene39071:CDS |
| AAGCTTATTCTACAAAATGG+TGG | 0.594920 | 7.4:-17771293 | MS.gene39071:CDS |
| GATGGGATTTAAGAAAGCAA+TGG | 0.597083 | 7.4:-17768263 | MS.gene39071:CDS |
| GAGTCCAACCCTGTTGAGAG+TGG | 0.598020 | 7.4:-17769750 | MS.gene39071:CDS |
| TGTTGACTTAGCACAAGTGC+TGG | 0.601901 | 7.4:-17768527 | MS.gene39071:CDS |
| TGTGCCCTCTTTGAATATGG+AGG | 0.602441 | 7.4:+17768049 | None:intergenic |
| ACTTGCCTCTGGCTTTGATG+CGG | 0.603394 | 7.4:-17772885 | MS.gene39071:CDS |
| ACCAATCATCTTACAGCCGA+AGG | 0.605335 | 7.4:+17773366 | None:intergenic |
| TCCGCCTGACAAATTTGATG+CGG | 0.608919 | 7.4:-17773598 | MS.gene39071:CDS |
| CATAGTTAAGCAGCAAGTGA+AGG | 0.611723 | 7.4:+17772922 | None:intergenic |
| ATGAGCCTCCATATTCAAAG+AGG | 0.613128 | 7.4:-17768054 | MS.gene39071:CDS |
| AGAACCATATATGACTCTTG+AGG | 0.617430 | 7.4:+17771459 | None:intergenic |
| TGAAGGTGATAAGTATAAGA+CGG | 0.620903 | 7.4:-17770052 | MS.gene39071:CDS |
| TATAAGACGGCAAAACTTTG+GGG | 0.621024 | 7.4:-17770039 | MS.gene39071:CDS |
| ACAAAGTTTAAATCTGATGA+CGG | 0.625224 | 7.4:+17772515 | None:intergenic |
| CATCTCATGATGCTTAGAGA+TGG | 0.626228 | 7.4:+17768282 | None:intergenic |
| GATGAATCTATTGCTCGAAG+AGG | 0.630129 | 7.4:-17769985 | MS.gene39071:intron |
| ACATTGAGAACCACTTCAAG+GGG | 0.633314 | 7.4:-17768162 | MS.gene39071:CDS |
| ACCGCATCAAATTTGTCAGG+CGG | 0.635534 | 7.4:+17773597 | None:intergenic |
| GGGATTTAAGAAAGCAATGG+AGG | 0.638447 | 7.4:-17768260 | MS.gene39071:CDS |
| TAATCAACCTGAAGAACAGG+AGG | 0.638857 | 7.4:-17768017 | MS.gene39071:CDS |
| AACAAGTCCATGTTCTACAA+CGG | 0.651160 | 7.4:-17768965 | MS.gene39071:CDS |
| TTGATCCGCATCAAAGCCAG+AGG | 0.652199 | 7.4:+17772880 | None:intergenic |
| TCATTGCTGGTCTGTAATGG+AGG | 0.662412 | 7.4:+17769504 | None:intergenic |
| TGAGCCTCCATATTCAAAGA+GGG | 0.666941 | 7.4:-17768053 | MS.gene39071:CDS |
| ATCACAATCCTCAAGCCAAG+AGG | 0.666970 | 7.4:+17768998 | None:intergenic |
| ATAAAGATCCACTCTCAACA+GGG | 0.671428 | 7.4:+17769742 | None:intergenic |
| CTGTTATTGAGGTTTGAACG+TGG | 0.709076 | 7.4:-17770109 | MS.gene39071:intron |
| AACGGCGGTCAAGTTCACAT+CGG | 0.709798 | 7.4:-17773555 | MS.gene39071:CDS |
| GAATTAATGATTGAAATGGG+GGG | 0.725048 | 7.4:-17772554 | MS.gene39071:CDS |
| TATTCAAAGAGGGCACAGAG+TGG | 0.749556 | 7.4:-17768043 | MS.gene39071:CDS |
| AAAGCCGTTGAAGAGAACGG+CGG | 0.786017 | 7.4:-17773570 | MS.gene39071:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTAAGAATAAATTTAA+TGG | - | chr7.4:17772360-17772379 | MS.gene39071:intron | 10.0% |
| !!! | TTAATATTTTGAGTTTAAAT+AGG | - | chr7.4:17770759-17770778 | MS.gene39071:intron | 10.0% |
| !!! | TTTTATATATTTGTTTTGTA+AGG | - | chr7.4:17771323-17771342 | MS.gene39071:intron | 10.0% |
| !! | ACAACTTTAATATTTACAAT+AGG | + | chr7.4:17769947-17769966 | None:intergenic | 15.0% |
| !! | AGAAGATAAATCATAAATAT+AGG | + | chr7.4:17772529-17772548 | None:intergenic | 15.0% |
| !! | TAAATCATAAATATAGGAAA+AGG | + | chr7.4:17772523-17772542 | None:intergenic | 15.0% |
| !! | TATTTGATAGAATTGTAAAA+AGG | + | chr7.4:17770410-17770429 | None:intergenic | 15.0% |
| !!! | AAAACTTTAAAATTTTTGAG+TGG | - | chr7.4:17772920-17772939 | MS.gene39071:CDS | 15.0% |
| !!! | ATAAAATTTGTTAGTATAAG+CGG | + | chr7.4:17770740-17770759 | None:intergenic | 15.0% |
| !!! | TACTTTTTCGTATTTTTATA+CGG | - | chr7.4:17771833-17771852 | MS.gene39071:intron | 15.0% |
| !! | AAAGAACAATATGATAGTAT+TGG | + | chr7.4:17768842-17768861 | None:intergenic | 20.0% |
| !! | AAGCAAAAAAAAAAAAGTGA+AGG | + | chr7.4:17769781-17769800 | None:intergenic | 20.0% |
| !! | AATAACAAAAAATCAGATAG+TGG | + | chr7.4:17768206-17768225 | None:intergenic | 20.0% |
| !! | AATAAGTGTAAAGAAATGAA+AGG | + | chr7.4:17771757-17771776 | None:intergenic | 20.0% |
| !! | AGATGAATTAATGATTGAAA+TGG | - | chr7.4:17769066-17769085 | MS.gene39071:intron | 20.0% |
| !! | ATAACAAAAAATCAGATAGT+GGG | + | chr7.4:17768205-17768224 | None:intergenic | 20.0% |
| !! | ATCATTTAAATACAAGCATT+GGG | + | chr7.4:17772289-17772308 | None:intergenic | 20.0% |
| !! | ATGAATTAATGATTGAAATG+GGG | - | chr7.4:17769068-17769087 | MS.gene39071:intron | 20.0% |
| !! | ATTATTAATAAGTGCAAACA+AGG | + | chr7.4:17770658-17770677 | None:intergenic | 20.0% |
| !! | GACTTTATTAATTGTTTGAA+TGG | - | chr7.4:17772993-17773012 | MS.gene39071:intron | 20.0% |
| !! | GATGAATTAATGATTGAAAT+GGG | - | chr7.4:17769067-17769086 | MS.gene39071:intron | 20.0% |
| !! | TAAATATAGGAAAAGGAATA+TGG | + | chr7.4:17772516-17772535 | None:intergenic | 20.0% |
| !! | TATCATTTAAATACAAGCAT+TGG | + | chr7.4:17772290-17772309 | None:intergenic | 20.0% |
| !! | TCATAGTCACAATATTAATA+TGG | + | chr7.4:17771611-17771630 | None:intergenic | 20.0% |
| !! | TGGTATTGTAAAATTAGTAA+AGG | - | chr7.4:17769598-17769617 | MS.gene39071:CDS | 20.0% |
| !! | TTAATATTGTGACTATGAAA+TGG | - | chr7.4:17771613-17771632 | MS.gene39071:intron | 20.0% |
| !! | TTATTAATAAGTGCAAACAA+GGG | + | chr7.4:17770657-17770676 | None:intergenic | 20.0% |
| !!! | AAGTTGAAATTTTGTTTAAC+AGG | - | chr7.4:17771267-17771286 | MS.gene39071:CDS | 20.0% |
| !!! | ATAGATTTTTTGTTTTAGAC+CGG | - | chr7.4:17768479-17768498 | MS.gene39071:CDS | 20.0% |
| !!! | ATTCATTTTTACAAGAATTC+AGG | - | chr7.4:17770793-17770812 | MS.gene39071:intron | 20.0% |
| !!! | ATTCTTCTTTTTTATCCTAT+TGG | + | chr7.4:17773048-17773067 | None:intergenic | 20.0% |
| !!! | GTTTTCTAGTTCTTAAATTT+AGG | - | chr7.4:17772828-17772847 | MS.gene39071:intron | 20.0% |
| !!! | TATGATATTCTTTTTCCAAA+AGG | - | chr7.4:17772691-17772710 | MS.gene39071:intron | 20.0% |
| !!! | TATTTTGAGTTTAAATAGGT+AGG | - | chr7.4:17770763-17770782 | MS.gene39071:intron | 20.0% |
| !!! | TTCAATTTTAACATATAGTG+TGG | + | chr7.4:17770953-17770972 | None:intergenic | 20.0% |
| !!! | TTCACTTTTTTTTTTTTGCT+TGG | - | chr7.4:17769780-17769799 | MS.gene39071:intron | 20.0% |
| !!! | TTTAAAGATCTAAAATCCTT+CGG | - | chr7.4:17768242-17768261 | MS.gene39071:CDS | 20.0% |
| !!! | TTTTATAGTATCTGTAGATT+TGG | - | chr7.4:17770985-17771004 | MS.gene39071:intron | 20.0% |
| ! | AAAATGAAATATGAACTGTG+AGG | - | chr7.4:17773650-17773669 | MS.gene39071:CDS | 25.0% |
| ! | AACCAATAGTTACTTATGAA+TGG | - | chr7.4:17770109-17770128 | MS.gene39071:intron | 25.0% |
| ! | AACCATTCATAAGTAACTAT+TGG | + | chr7.4:17770114-17770133 | None:intergenic | 25.0% |
| ! | AACTAGTATATTTGAATCTG+CGG | + | chr7.4:17771995-17772014 | None:intergenic | 25.0% |
| ! | AATTCAAAGATCTGTTATTG+AGG | - | chr7.4:17771504-17771523 | MS.gene39071:CDS | 25.0% |
| ! | ACAAAGTTTAAATCTGATGA+CGG | + | chr7.4:17769112-17769131 | None:intergenic | 25.0% |
| ! | ACAATTAAAATCTCAGAGAT+TGG | + | chr7.4:17770015-17770034 | None:intergenic | 25.0% |
| ! | AGGATAAAAAAGAAGAATCT+AGG | - | chr7.4:17773050-17773069 | MS.gene39071:intron | 25.0% |
| ! | AGTAGTATGAATAAAACAGA+AGG | + | chr7.4:17769270-17769289 | None:intergenic | 25.0% |
| ! | ATACATTTAGTCAAGAATTC+GGG | - | chr7.4:17771084-17771103 | MS.gene39071:intron | 25.0% |
| ! | ATTAAAGTTCAATTCATTGC+TGG | + | chr7.4:17772136-17772155 | None:intergenic | 25.0% |
| ! | ATTAATTGTTTGAATGGTTC+AGG | - | chr7.4:17772999-17773018 | MS.gene39071:intron | 25.0% |
| ! | ATTTCTCCTATAATTAAGTG+CGG | + | chr7.4:17768338-17768357 | None:intergenic | 25.0% |
| ! | CAATGAATTGAACTTTAATC+GGG | - | chr7.4:17772137-17772156 | MS.gene39071:intron | 25.0% |
| ! | CATAAAATTTACAACCTGTT+TGG | + | chr7.4:17770227-17770246 | None:intergenic | 25.0% |
| ! | CTAAAAGGTAATAGACTAAT+AGG | + | chr7.4:17770702-17770721 | None:intergenic | 25.0% |
| ! | GAAAAAAACTGCATAAATCA+AGG | + | chr7.4:17770495-17770514 | None:intergenic | 25.0% |
| ! | GAAAAGCTTATTCTACAAAA+TGG | - | chr7.4:17770328-17770347 | MS.gene39071:intron | 25.0% |
| ! | GATACATTTAGTCAAGAATT+CGG | - | chr7.4:17771083-17771102 | MS.gene39071:intron | 25.0% |
| ! | GATTTATCTTGAACTAAAGA+TGG | - | chr7.4:17769524-17769543 | MS.gene39071:CDS | 25.0% |
| ! | GCAATGAATTGAACTTTAAT+CGG | - | chr7.4:17772136-17772155 | MS.gene39071:intron | 25.0% |
| ! | GCTTTCCTATGAATTTAATT+TGG | - | chr7.4:17772486-17772505 | MS.gene39071:CDS | 25.0% |
| ! | GTAAAGAAATGAAAGGATAA+CGG | + | chr7.4:17771750-17771769 | None:intergenic | 25.0% |
| ! | GTTTGCCAAATTAAATTCAT+AGG | + | chr7.4:17772494-17772513 | None:intergenic | 25.0% |
| ! | TAACTGATAACTTAAACCTT+AGG | + | chr7.4:17768957-17768976 | None:intergenic | 25.0% |
| ! | TGAATTAATGATTGAAATGG+GGG | - | chr7.4:17769069-17769088 | MS.gene39071:intron | 25.0% |
| ! | TGATAAAAGAAACAAAACTG+AGG | + | chr7.4:17768620-17768639 | None:intergenic | 25.0% |
| ! | TTACACTGGTAATAATAACT+AGG | - | chr7.4:17771061-17771080 | MS.gene39071:intron | 25.0% |
| ! | TTCCAATTGAGAACAAAAAT+AGG | + | chr7.4:17769015-17769034 | None:intergenic | 25.0% |
| ! | TTCTTATCTGTTAGAATGAA+TGG | - | chr7.4:17770871-17770890 | MS.gene39071:intron | 25.0% |
| !! | AGAAACAAATTTTGCAACAT+CGG | + | chr7.4:17773522-17773541 | None:intergenic | 25.0% |
| !! | GGTGGTAGTATAAATATTTT+AGG | - | chr7.4:17769465-17769484 | MS.gene39071:CDS | 25.0% |
| !! | TAAAAATGAGTTGAAGATTG+AGG | - | chr7.4:17773274-17773293 | MS.gene39071:intron | 25.0% |
| !! | TCTCTAAAAATAACCATTGT+TGG | - | chr7.4:17769732-17769751 | MS.gene39071:CDS | 25.0% |
| !! | TCTTTCACAAATTTGCTTTA+AGG | - | chr7.4:17770529-17770548 | MS.gene39071:intron | 25.0% |
| !! | TGTTCCATTATTTGTTAAAG+AGG | - | chr7.4:17772083-17772102 | MS.gene39071:intron | 25.0% |
| !! | TGTTTCTTTTATCATTGAGT+AGG | - | chr7.4:17768626-17768645 | MS.gene39071:intron | 25.0% |
| !! | TTAAACCTTAGGATTTTAGA+GGG | + | chr7.4:17768946-17768965 | None:intergenic | 25.0% |
| !! | TTTTATTCTTCCAGTCTAAT+TGG | - | chr7.4:17769227-17769246 | MS.gene39071:intron | 25.0% |
| !!! | AATCTTTTTTCTACATTAGC+TGG | - | chr7.4:17771237-17771256 | MS.gene39071:CDS | 25.0% |
| !!! | AGTTATCAGTTATTTTCTCT+TGG | - | chr7.4:17768965-17768984 | MS.gene39071:CDS | 25.0% |
| !!! | CAGTATTCAACAATTTGTTA+TGG | - | chr7.4:17770845-17770864 | MS.gene39071:intron | 25.0% |
| !!! | CTACTTTTTGGTTATCTATT+AGG | - | chr7.4:17772754-17772773 | MS.gene39071:intron | 25.0% |
| !!! | TAAATTGATTTTCATAGCAG+AGG | - | chr7.4:17768583-17768602 | MS.gene39071:CDS | 25.0% |
| !!! | TCAATCTTCAACTCATTTTT+AGG | + | chr7.4:17773275-17773294 | None:intergenic | 25.0% |
| !!! | TTCCTATTTTTGTTCTCAAT+TGG | - | chr7.4:17769010-17769029 | MS.gene39071:CDS | 25.0% |
| AAAGAAGAATCTAGGAATGA+AGG | - | chr7.4:17773058-17773077 | MS.gene39071:intron | 30.0% | |
| AAGCTTATCTTATGGTAACA+GGG | + | chr7.4:17771795-17771814 | None:intergenic | 30.0% | |
| AAGCTTATTCTACAAAATGG+TGG | - | chr7.4:17770331-17770350 | MS.gene39071:intron | 30.0% | |
| AATGGAGAAGCTAAGTAATA+TGG | - | chr7.4:17772245-17772264 | MS.gene39071:intron | 30.0% | |
| AATTAATAAAGTCGACGAAG+TGG | + | chr7.4:17772986-17773005 | None:intergenic | 30.0% | |
| ACTTAATTATTCAGTCAGAG+AGG | + | chr7.4:17771479-17771498 | None:intergenic | 30.0% | |
| AGGATCTACATTTAAAGACT+TGG | + | chr7.4:17772025-17772044 | None:intergenic | 30.0% | |
| ATGTATCAATACATCAAAGC+AGG | + | chr7.4:17770823-17770842 | None:intergenic | 30.0% | |
| ATTATCATTTGTGCCAGATA+AGG | + | chr7.4:17770608-17770627 | None:intergenic | 30.0% | |
| GAATTAATGATTGAAATGGG+GGG | - | chr7.4:17769070-17769089 | MS.gene39071:intron | 30.0% | |
| GTAAAAATCATGTAGTCCAA+GGG | - | chr7.4:17769386-17769405 | MS.gene39071:CDS | 30.0% | |
| GTATCAATGTATACGATTTC+TGG | - | chr7.4:17772443-17772462 | MS.gene39071:intron | 30.0% | |
| GTATGAATAAAACAGAAGGA+AGG | + | chr7.4:17769266-17769285 | None:intergenic | 30.0% | |
| TAAGTAATCATCTAGATGCA+GGG | + | chr7.4:17769912-17769931 | None:intergenic | 30.0% | |
| TAATAATCAACCTGAAGAAC+AGG | - | chr7.4:17773604-17773623 | MS.gene39071:CDS | 30.0% | |
| TAGGTCAACAATATTTAGTC+AGG | + | chr7.4:17770683-17770702 | None:intergenic | 30.0% | |
| TCAAAACGTACGTAATTTCT+TGG | - | chr7.4:17768143-17768162 | MS.gene39071:CDS | 30.0% | |
| TCTGCCTCTTTAACAAATAA+TGG | + | chr7.4:17772090-17772109 | None:intergenic | 30.0% | |
| TGAAGGTGATAAGTATAAGA+CGG | - | chr7.4:17771572-17771591 | MS.gene39071:intron | 30.0% | |
| TGTAAAAATCATGTAGTCCA+AGG | - | chr7.4:17769385-17769404 | MS.gene39071:CDS | 30.0% | |
| TGTCATCGTGAAAAATGTTT+GGG | - | chr7.4:17769129-17769148 | MS.gene39071:intron | 30.0% | |
| TTGTCATCGTGAAAAATGTT+TGG | - | chr7.4:17769128-17769147 | MS.gene39071:intron | 30.0% | |
| ! | AAACATGATAACACACCTTT+TGG | + | chr7.4:17772709-17772728 | None:intergenic | 30.0% |
| ! | AGAAATTACGTACGTTTTGA+CGG | + | chr7.4:17768143-17768162 | None:intergenic | 30.0% |
| ! | AGTGCTTTTATGTGATACAT+TGG | + | chr7.4:17769341-17769360 | None:intergenic | 30.0% |
| ! | CTACAACAAACGTTTTTCAT+TGG | - | chr7.4:17769755-17769774 | MS.gene39071:CDS | 30.0% |
| ! | CTTAAACCTTAGGATTTTAG+AGG | + | chr7.4:17768947-17768966 | None:intergenic | 30.0% |
| ! | GAAACAAATTTTGCAACATC+GGG | + | chr7.4:17773521-17773540 | None:intergenic | 30.0% |
| ! | GCGTTAATTAACTCTACTTT+TGG | - | chr7.4:17769431-17769450 | MS.gene39071:CDS | 30.0% |
| ! | GTGCTTTTATGTGATACATT+GGG | + | chr7.4:17769340-17769359 | None:intergenic | 30.0% |
| ! | TCAATGTTTTCCTTTCTAAC+CGG | + | chr7.4:17773449-17773468 | None:intergenic | 30.0% |
| ! | TGCTTTGATGTATTGATACA+TGG | - | chr7.4:17770822-17770841 | MS.gene39071:intron | 30.0% |
| ! | TGCTTTTATGTGATACATTG+GGG | + | chr7.4:17769339-17769358 | None:intergenic | 30.0% |
| ! | TGTTTAGTTCAAAACCCAAA+AGG | + | chr7.4:17771699-17771718 | None:intergenic | 30.0% |
| !! | AAAAACCCTCTAAAATCCTA+AGG | - | chr7.4:17768938-17768957 | MS.gene39071:CDS | 30.0% |
| !! | AAATTTGTTAGTATAAGCGG+AGG | + | chr7.4:17770737-17770756 | None:intergenic | 30.0% |
| !! | AAGTAACTATTGGTTTCTTC+AGG | + | chr7.4:17770104-17770123 | None:intergenic | 30.0% |
| !! | ATCATGTGTTAGTGTTGTTT+AGG | - | chr7.4:17768373-17768392 | MS.gene39071:CDS | 30.0% |
| !! | ATTTGTGTTTTTACAGGGAA+AGG | - | chr7.4:17772554-17772573 | MS.gene39071:CDS | 30.0% |
| !! | TCAACTCATTTTTAGGCTTT+TGG | + | chr7.4:17773268-17773287 | None:intergenic | 30.0% |
| !! | TCACTGGTTGTATTATTTTC+TGG | - | chr7.4:17769578-17769597 | MS.gene39071:CDS | 30.0% |
| !! | TGGTCTATCTCATTTAGTTT+TGG | - | chr7.4:17769869-17769888 | MS.gene39071:intron | 30.0% |
| !! | TTTGTGTTTTTACAGGGAAA+GGG | - | chr7.4:17772555-17772574 | MS.gene39071:CDS | 30.0% |
| !!! | AGCTCATATGTTTTGTTTCT+TGG | - | chr7.4:17769849-17769868 | MS.gene39071:intron | 30.0% |
| !!! | ATCTCATTTAGTTTTGGGTT+TGG | - | chr7.4:17769875-17769894 | MS.gene39071:intron | 30.0% |
| !!! | ATTCATCTATTTTAACCTGC+AGG | + | chr7.4:17769054-17769073 | None:intergenic | 30.0% |
| !!! | GGTCTATCTCATTTAGTTTT+GGG | - | chr7.4:17769870-17769889 | MS.gene39071:intron | 30.0% |
| !!! | TAGGTATCGTAGTGTTTTTT+AGG | - | chr7.4:17772847-17772866 | MS.gene39071:intron | 30.0% |
| AAACATTGAGAACCACTTCA+AGG | - | chr7.4:17773460-17773479 | MS.gene39071:intron | 35.0% | |
| AACAAGTCCATGTTCTACAA+CGG | - | chr7.4:17772659-17772678 | MS.gene39071:intron | 35.0% | |
| AACATTGAGAACCACTTCAA+GGG | - | chr7.4:17773461-17773480 | MS.gene39071:intron | 35.0% | |
| AGAACCATATATGACTCTTG+AGG | + | chr7.4:17770168-17770187 | None:intergenic | 35.0% | |
| AGATTGGATAAGTGTGGAAT+TGG | + | chr7.4:17769999-17770018 | None:intergenic | 35.0% | |
| AGGAAGATTCTGGTCATATT+TGG | - | chr7.4:17769409-17769428 | MS.gene39071:CDS | 35.0% | |
| AGGTATGGATGTTCTCTAAA+AGG | + | chr7.4:17770717-17770736 | None:intergenic | 35.0% | |
| AGTATAAGACGGCAAAACTT+TGG | - | chr7.4:17771583-17771602 | MS.gene39071:intron | 35.0% | |
| ATAAAGATCCACTCTCAACA+GGG | + | chr7.4:17771885-17771904 | None:intergenic | 35.0% | |
| ATAAGGGATACTAATGCCTA+AGG | + | chr7.4:17771398-17771417 | None:intergenic | 35.0% | |
| ATAGCCAGGAAAAGGATATT+GGG | - | chr7.4:17771941-17771960 | MS.gene39071:intron | 35.0% | |
| ATATGGTTCTTCCTTTCTCT+GGG | - | chr7.4:17770178-17770197 | MS.gene39071:intron | 35.0% | |
| ATCTCTAAGCATCATGAGAT+GGG | - | chr7.4:17773344-17773363 | MS.gene39071:intron | 35.0% | |
| ATTACGCTGTTAAAACCTCT+TGG | - | chr7.4:17772611-17772630 | MS.gene39071:intron | 35.0% | |
| ATTTGTGCCAGATAAGGAAA+AGG | + | chr7.4:17770602-17770621 | None:intergenic | 35.0% | |
| CAAGCTTATCTTATGGTAAC+AGG | + | chr7.4:17771796-17771815 | None:intergenic | 35.0% | |
| CTAACACCGCACTTAATTAT+AGG | - | chr7.4:17768329-17768348 | MS.gene39071:CDS | 35.0% | |
| CTGTTACCATAAGATAAGCT+TGG | - | chr7.4:17771794-17771813 | MS.gene39071:intron | 35.0% | |
| GAAAAGGTTAATGCAGACAT+GGG | + | chr7.4:17770586-17770605 | None:intergenic | 35.0% | |
| GAAGAAAAGACCAATTAGAC+TGG | + | chr7.4:17769240-17769259 | None:intergenic | 35.0% | |
| GAATAGACTCACATTTCTGT+TGG | + | chr7.4:17772339-17772358 | None:intergenic | 35.0% | |
| GAGAACAAAAATAGGAAGAG+AGG | + | chr7.4:17769007-17769026 | None:intergenic | 35.0% | |
| GATATTGGGATAATGCAATC+TGG | - | chr7.4:17771955-17771974 | MS.gene39071:intron | 35.0% | |
| GATGGGATTTAAGAAAGCAA+TGG | - | chr7.4:17773361-17773380 | MS.gene39071:intron | 35.0% | |
| GATTGCAGAATATCACTTGT+TGG | - | chr7.4:17772207-17772226 | MS.gene39071:intron | 35.0% | |
| GGAATTAAAGAGACGACAAA+AGG | - | chr7.4:17773175-17773194 | MS.gene39071:intron | 35.0% | |
| GGAGATGGAATATGTAAGAA+TGG | - | chr7.4:17773202-17773221 | MS.gene39071:intron | 35.0% | |
| GTAAGTAATCATCTAGATGC+AGG | + | chr7.4:17769913-17769932 | None:intergenic | 35.0% | |
| GTATAAGACGGCAAAACTTT+GGG | - | chr7.4:17771584-17771603 | MS.gene39071:intron | 35.0% | |
| GTCTTATACTTATCACCTTC+AGG | + | chr7.4:17771573-17771592 | None:intergenic | 35.0% | |
| GTTCTTCAATGTGCTAAAGA+AGG | - | chr7.4:17768659-17768678 | MS.gene39071:intron | 35.0% | |
| TAAAAACCTGTCTGCACAAA+AGG | + | chr7.4:17771308-17771327 | None:intergenic | 35.0% | |
| TATAAGACGGCAAAACTTTG+GGG | - | chr7.4:17771585-17771604 | MS.gene39071:intron | 35.0% | |
| TATATGGTTCTTCCTTTCTC+TGG | - | chr7.4:17770177-17770196 | MS.gene39071:intron | 35.0% | |
| TATTATTGTATGTGACCTGC+AGG | - | chr7.4:17769036-17769055 | MS.gene39071:CDS | 35.0% | |
| TGAAGCTTATGTTAGTTCAC+TGG | - | chr7.4:17769562-17769581 | MS.gene39071:CDS | 35.0% | |
| TGTTACGTACTTGAATGATC+CGG | - | chr7.4:17773427-17773446 | MS.gene39071:intron | 35.0% | |
| TGTTCCTCAAGAGTCATATA+TGG | - | chr7.4:17770161-17770180 | MS.gene39071:intron | 35.0% | |
| TTCAAATGTTCCTTGAGAAG+AGG | - | chr7.4:17770457-17770476 | MS.gene39071:intron | 35.0% | |
| TTCAATGTGCTAAAGAAGGA+AGG | - | chr7.4:17768663-17768682 | MS.gene39071:intron | 35.0% | |
| TTCTGCAATCTGCTAAATAC+CGG | + | chr7.4:17772197-17772216 | None:intergenic | 35.0% | |
| ! | AAAGTGCAACAAAAGTGTGT+GGG | + | chr7.4:17768426-17768445 | None:intergenic | 35.0% |
| ! | AATTCATTGCTGGTCTGTAA+TGG | + | chr7.4:17772126-17772145 | None:intergenic | 35.0% |
| ! | AGCGTTTAGGTTTAAGCATT+CGG | - | chr7.4:17768510-17768529 | MS.gene39071:CDS | 35.0% |
| ! | CGCTGATTGTAAGTACATAA+GGG | + | chr7.4:17771414-17771433 | None:intergenic | 35.0% |
| ! | GCATTAACCTTTTCCTTATC+TGG | - | chr7.4:17770592-17770611 | MS.gene39071:intron | 35.0% |
| ! | GCTTTTATGTGATACATTGG+GGG | + | chr7.4:17769338-17769357 | None:intergenic | 35.0% |
| ! | GGATGTTAGTTTCAGAAATG+TGG | - | chr7.4:17772464-17772483 | MS.gene39071:intron | 35.0% |
| ! | TCGCTGATTGTAAGTACATA+AGG | + | chr7.4:17771415-17771434 | None:intergenic | 35.0% |
| ! | TGAGGCTTATAAGCTTTATG+AGG | - | chr7.4:17773292-17773311 | MS.gene39071:intron | 35.0% |
| ! | TTATCCCAATATCCTTTTCC+TGG | + | chr7.4:17771948-17771967 | None:intergenic | 35.0% |
| !! | AAAATCAGATAGTGGGATAG+TGG | + | chr7.4:17768198-17768217 | None:intergenic | 35.0% |
| !! | AGGATTTTAGAGGGTTTTTG+AGG | + | chr7.4:17768937-17768956 | None:intergenic | 35.0% |
| !! | CCTGCATTTGTGTTTTTACA+GGG | - | chr7.4:17772549-17772568 | MS.gene39071:CDS | 35.0% |
| !! | CTACTTTTGGCAAGTAGTTT+AGG | - | chr7.4:17769444-17769463 | MS.gene39071:CDS | 35.0% |
| !! | GGATTTTAGAGGGTTTTTGA+GGG | + | chr7.4:17768936-17768955 | None:intergenic | 35.0% |
| !! | GTATCACATAAAAGCACTCA+GGG | - | chr7.4:17769343-17769362 | MS.gene39071:CDS | 35.0% |
| !! | TCCTGCATTTGTGTTTTTAC+AGG | - | chr7.4:17772548-17772567 | MS.gene39071:CDS | 35.0% |
| !! | TGTATCACATAAAAGCACTC+AGG | - | chr7.4:17769342-17769361 | MS.gene39071:CDS | 35.0% |
| !! | TGTGTTCTGTGTCTACTTTT+TGG | - | chr7.4:17772742-17772761 | MS.gene39071:intron | 35.0% |
| !! | TGTTAGTGTTGTTTAGGTGT+CGG | - | chr7.4:17768379-17768398 | MS.gene39071:CDS | 35.0% |
| !!! | AGTGTTTTTTAGGAGTTTGG+AGG | - | chr7.4:17772857-17772876 | MS.gene39071:intron | 35.0% |
| !!! | CATATGTTTTGACTGTGTAG+CGG | + | chr7.4:17772049-17772068 | None:intergenic | 35.0% |
| !!! | CGTAGTGTTTTTTAGGAGTT+TGG | - | chr7.4:17772854-17772873 | MS.gene39071:intron | 35.0% |
| !!! | GTGTTTTTTAGGAGTTTGGA+GGG | - | chr7.4:17772858-17772877 | MS.gene39071:intron | 35.0% |
| !!! | TGGTTTTGAAGCTTCTGAAA+TGG | - | chr7.4:17772227-17772246 | MS.gene39071:intron | 35.0% |
| !!! | TGTTTTTTAGGAGTTTGGAG+GGG | - | chr7.4:17772859-17772878 | MS.gene39071:intron | 35.0% |
| AAAATCATGTAGTCCAAGGG+AGG | - | chr7.4:17769389-17769408 | MS.gene39071:CDS | 40.0% | |
| AAAGAGACGACAAAAGGAGA+TGG | - | chr7.4:17773181-17773200 | MS.gene39071:intron | 40.0% | |
| AAATAGGAAGAGAGGAGTGA+AGG | + | chr7.4:17768999-17769018 | None:intergenic | 40.0% | |
| AAGAATGGACGATGACTTGA+GGG | - | chr7.4:17773217-17773236 | MS.gene39071:intron | 40.0% | |
| AAGTTGACGCACATAGTAGT+CGG | - | chr7.4:17772309-17772328 | MS.gene39071:intron | 40.0% | |
| ACATTGAGAACCACTTCAAG+GGG | - | chr7.4:17773462-17773481 | MS.gene39071:intron | 40.0% | |
| ACCTAAACGCTCTAATTGTC+CGG | + | chr7.4:17768501-17768520 | None:intergenic | 40.0% | |
| ACGAAGTGGCAGAAATCATA+AGG | + | chr7.4:17772972-17772991 | None:intergenic | 40.0% | |
| ACGGATAGCATGTCTGAATA+AGG | - | chr7.4:17771852-17771871 | MS.gene39071:intron | 40.0% | |
| ACTGCACGTGTATATATGTG+TGG | + | chr7.4:17768563-17768582 | None:intergenic | 40.0% | |
| ACTTCTTCCGTCATATCACA+TGG | + | chr7.4:17768451-17768470 | None:intergenic | 40.0% | |
| ACTTTCGCCATGTGATATGA+CGG | - | chr7.4:17768441-17768460 | MS.gene39071:CDS | 40.0% | |
| AGAACCGCATCAAATTTGTC+AGG | + | chr7.4:17768033-17768052 | None:intergenic | 40.0% | |
| AGTCAGCCAAGCTTATCTTA+TGG | + | chr7.4:17771803-17771822 | None:intergenic | 40.0% | |
| AGTGAAAGTCGAGTTTACAC+TGG | - | chr7.4:17771047-17771066 | MS.gene39071:intron | 40.0% | |
| ATAAGATAAGCTTGGCTGAC+TGG | - | chr7.4:17771802-17771821 | MS.gene39071:intron | 40.0% | |
| ATGAGCCTCCATATTCAAAG+AGG | - | chr7.4:17773570-17773589 | MS.gene39071:CDS | 40.0% | |
| ATGTACCAGACCTTATACTC+TGG | + | chr7.4:17769157-17769176 | None:intergenic | 40.0% | |
| CAAATTTGTCAGGCGGAAAT+AGG | + | chr7.4:17768023-17768042 | None:intergenic | 40.0% | |
| CAGATCTTTAACCCAGAGAA+AGG | + | chr7.4:17770192-17770211 | None:intergenic | 40.0% | |
| CATAGCCAGGAAAAGGATAT+TGG | - | chr7.4:17771940-17771959 | MS.gene39071:intron | 40.0% | |
| CATAGTTAAGCAGCAAGTGA+AGG | + | chr7.4:17768705-17768724 | None:intergenic | 40.0% | |
| CATCTCATGATGCTTAGAGA+TGG | + | chr7.4:17773345-17773364 | None:intergenic | 40.0% | |
| CATCTCTAAGCATCATGAGA+TGG | - | chr7.4:17773343-17773362 | MS.gene39071:intron | 40.0% | |
| CCCTGTAAAAACACAAATGC+AGG | + | chr7.4:17772552-17772571 | None:intergenic | 40.0% | |
| CTGTTATTGAGGTTTGAACG+TGG | - | chr7.4:17771515-17771534 | MS.gene39071:CDS | 40.0% | |
| CTTGAATGATCCGGTTAGAA+AGG | - | chr7.4:17773436-17773455 | MS.gene39071:intron | 40.0% | |
| GAGGAGGATTGTAAGTCTAA+GGG | - | chr7.4:17773311-17773330 | MS.gene39071:intron | 40.0% | |
| GATAAAGATCCACTCTCAAC+AGG | + | chr7.4:17771886-17771905 | None:intergenic | 40.0% | |
| GATGAATCTATTGCTCGAAG+AGG | - | chr7.4:17771639-17771658 | MS.gene39071:intron | 40.0% | |
| GCAATGTTAGGTCCTCTTTA+TGG | - | chr7.4:17773239-17773258 | MS.gene39071:intron | 40.0% | |
| GGAAAAGGTTAATGCAGACA+TGG | + | chr7.4:17770587-17770606 | None:intergenic | 40.0% | |
| GGGATTTAAGAAAGCAATGG+AGG | - | chr7.4:17773364-17773383 | MS.gene39071:intron | 40.0% | |
| GTAGTGAAAACTGTTGCTCT+AGG | - | chr7.4:17772583-17772602 | MS.gene39071:intron | 40.0% | |
| GTCATCAGACTCAGAATCAT+TGG | + | chr7.4:17772169-17772188 | None:intergenic | 40.0% | |
| TAAGAATGGACGATGACTTG+AGG | - | chr7.4:17773216-17773235 | MS.gene39071:intron | 40.0% | |
| TAATCAACCTGAAGAACAGG+AGG | - | chr7.4:17773607-17773626 | MS.gene39071:CDS | 40.0% | |
| TATCTTCACGTAACGTGACT+AGG | - | chr7.4:17771902-17771921 | MS.gene39071:intron | 40.0% | |
| TATGTGATACATTGGGGGAT+AGG | + | chr7.4:17769333-17769352 | None:intergenic | 40.0% | |
| TCAAAATCATCCCCTTGAAG+TGG | + | chr7.4:17773475-17773494 | None:intergenic | 40.0% | |
| TCAGAAACTTCACTTCAGAC+TGG | + | chr7.4:17771210-17771229 | None:intergenic | 40.0% | |
| TCTCAGAGATTGGATAAGTG+TGG | + | chr7.4:17770005-17770024 | None:intergenic | 40.0% | |
| TGAGCCTCCATATTCAAAGA+GGG | - | chr7.4:17773571-17773590 | MS.gene39071:CDS | 40.0% | |
| TGAGGAGGATTGTAAGTCTA+AGG | - | chr7.4:17773310-17773329 | MS.gene39071:intron | 40.0% | |
| TGCATGTTCCAATACTCTCA+CGG | - | chr7.4:17768796-17768815 | MS.gene39071:intron | 40.0% | |
| TGCTTTAATGCTGCATGTTG+TGG | - | chr7.4:17771671-17771690 | MS.gene39071:intron | 40.0% | |
| TGGTGGCTAATATGACTCTA+TGG | - | chr7.4:17769826-17769845 | MS.gene39071:intron | 40.0% | |
| TGGTTCAGGTCAGAAAAAGT+TGG | - | chr7.4:17773013-17773032 | MS.gene39071:intron | 40.0% | |
| TGTTAGTATAAGCGGAGGTA+TGG | + | chr7.4:17770732-17770751 | None:intergenic | 40.0% | |
| TTCAGATAAGCGCAAAGAGA+TGG | - | chr7.4:17770306-17770325 | MS.gene39071:intron | 40.0% | |
| TTCAGGTCAGAAAAAGTTGG+TGG | - | chr7.4:17773016-17773035 | MS.gene39071:intron | 40.0% | |
| ! | ACTTCAAGGGGATGATTTTG+AGG | - | chr7.4:17773474-17773493 | MS.gene39071:intron | 40.0% |
| ! | ATAATCGTTTTCGCCATTGC+GGG | + | chr7.4:17768106-17768125 | None:intergenic | 40.0% |
| ! | CTTCACTTGCTGCTTAACTA+TGG | - | chr7.4:17768703-17768722 | MS.gene39071:intron | 40.0% |
| ! | CTTTTGGCAAGTAGTTTAGG+TGG | - | chr7.4:17769447-17769466 | MS.gene39071:CDS | 40.0% |
| ! | GAAAGTGCAACAAAAGTGTG+TGG | + | chr7.4:17768427-17768446 | None:intergenic | 40.0% |
| ! | GATAATCGTTTTCGCCATTG+CGG | + | chr7.4:17768107-17768126 | None:intergenic | 40.0% |
| ! | GATTTTCTCTCCTCTTCTCA+AGG | + | chr7.4:17770470-17770489 | None:intergenic | 40.0% |
| ! | GGCTTATAAGCTTTATGAGG+AGG | - | chr7.4:17773295-17773314 | MS.gene39071:intron | 40.0% |
| ! | GGCTTTTGGTATCCATAAAG+AGG | + | chr7.4:17773254-17773273 | None:intergenic | 40.0% |
| ! | GTCTGAAGTGAAGTTTCTGA+TGG | - | chr7.4:17771210-17771229 | MS.gene39071:CDS | 40.0% |
| ! | TGCATGTTGTGGTACCTTTT+GGG | - | chr7.4:17771682-17771701 | MS.gene39071:intron | 40.0% |
| ! | TGTTAAAACCTCTTGGCTTG+AGG | - | chr7.4:17772618-17772637 | MS.gene39071:intron | 40.0% |
| ! | TTGATTATGCTGCTTCTCGT+AGG | - | chr7.4:17773120-17773139 | MS.gene39071:intron | 40.0% |
| ! | TTTGACGCATTGATACTTGG+TGG | - | chr7.4:17771116-17771135 | MS.gene39071:intron | 40.0% |
| !! | AAGAAAGCAATGGAGGCATT+TGG | - | chr7.4:17773371-17773390 | MS.gene39071:CDS | 40.0% |
| !! | ACGTTTGTTGTAGCCAACAA+TGG | + | chr7.4:17769748-17769767 | None:intergenic | 40.0% |
| !! | CTTGGTTTTTGTCCCAGATT+GGG | - | chr7.4:17769798-17769817 | MS.gene39071:intron | 40.0% |
| !! | GGTTTTAATCTTTCCCGCAA+TGG | - | chr7.4:17768090-17768109 | MS.gene39071:CDS | 40.0% |
| !! | GTATTTCTAGCAGTCTGCAA+CGG | - | chr7.4:17770907-17770926 | MS.gene39071:intron | 40.0% |
| !!! | GGGATGATTTTGAGGTTTTC+TGG | - | chr7.4:17773482-17773501 | MS.gene39071:intron | 40.0% |
| ACCAATCATCTTACAGCCGA+AGG | + | chr7.4:17768261-17768280 | None:intergenic | 45.0% | |
| ACCACGTTATGTCTTGCAGT+GGG | - | chr7.4:17770068-17770087 | MS.gene39071:CDS | 45.0% | |
| ACCGCATCAAATTTGTCAGG+CGG | + | chr7.4:17768030-17768049 | None:intergenic | 45.0% | |
| ACGACAAAAGGAGATGGAGA+TGG | - | chr7.4:17773187-17773206 | MS.gene39071:intron | 45.0% | |
| AGTTGACGCACATAGTAGTC+GGG | - | chr7.4:17772310-17772329 | MS.gene39071:intron | 45.0% | |
| ATCACAATCCTCAAGCCAAG+AGG | + | chr7.4:17772629-17772648 | None:intergenic | 45.0% | |
| ATTTGAATCTGCGGCTCTTG+AGG | + | chr7.4:17771986-17772005 | None:intergenic | 45.0% | |
| CACTGTACCGTTGTAGAACA+TGG | + | chr7.4:17772669-17772688 | None:intergenic | 45.0% | |
| CTCAAAGCCGTTGAAGAGAA+CGG | - | chr7.4:17768051-17768070 | MS.gene39071:CDS | 45.0% | |
| CTCTGTGCCCTCTTTGAATA+TGG | + | chr7.4:17773581-17773600 | None:intergenic | 45.0% | |
| CTGAGTCTGATGACAATGAC+CGG | - | chr7.4:17772175-17772194 | MS.gene39071:intron | 45.0% | |
| GATGACTTGAGGGCAATGTT+AGG | - | chr7.4:17773227-17773246 | MS.gene39071:intron | 45.0% | |
| GCTGTCAAAATACTTGCCTC+TGG | - | chr7.4:17768728-17768747 | MS.gene39071:intron | 45.0% | |
| GGGTTAAAGATCTGTGTGAC+TGG | - | chr7.4:17770198-17770217 | MS.gene39071:intron | 45.0% | |
| GTCTTCTATTGCACTGCCTT+AGG | - | chr7.4:17771379-17771398 | MS.gene39071:intron | 45.0% | |
| GTGGGATCTTTAGACGTGTA+TGG | + | chr7.4:17768408-17768427 | None:intergenic | 45.0% | |
| TCCGCCTGACAAATTTGATG+CGG | - | chr7.4:17768026-17768045 | MS.gene39071:CDS | 45.0% | |
| TCCTTCGGCTGTAAGATGAT+TGG | - | chr7.4:17768257-17768276 | MS.gene39071:CDS | 45.0% | |
| TGTGAAAGACACTGAAGCTG+CGG | + | chr7.4:17770518-17770537 | None:intergenic | 45.0% | |
| TGTGCCCTCTTTGAATATGG+AGG | + | chr7.4:17773578-17773597 | None:intergenic | 45.0% | |
| TGTGTGACTGGAATCCAAAC+AGG | - | chr7.4:17770210-17770229 | MS.gene39071:intron | 45.0% | |
| TGTTTGGGCTCCAGAGTATA+AGG | - | chr7.4:17769144-17769163 | MS.gene39071:intron | 45.0% | |
| TTGTCCCAGATTGGGATTTG+TGG | - | chr7.4:17769806-17769825 | MS.gene39071:intron | 45.0% | |
| ! | ACCGGACAATTAGAGCGTTT+AGG | - | chr7.4:17768497-17768516 | MS.gene39071:CDS | 45.0% |
| ! | AGTGAACCTTTTGTGCAGAC+AGG | - | chr7.4:17771299-17771318 | MS.gene39071:CDS | 45.0% |
| ! | CACTTGCTGCTTAACTATGG+AGG | - | chr7.4:17768706-17768725 | MS.gene39071:intron | 45.0% |
| ! | CAGCAAGTGAAGGCTTGTTT+GGG | + | chr7.4:17768695-17768714 | None:intergenic | 45.0% |
| ! | CGCTTTGACGCATTGATACT+TGG | - | chr7.4:17771113-17771132 | MS.gene39071:intron | 45.0% |
| ! | CTGCATGTTGTGGTACCTTT+TGG | - | chr7.4:17771681-17771700 | MS.gene39071:intron | 45.0% |
| ! | TATTCAAAGAGGGCACAGAG+TGG | - | chr7.4:17773581-17773600 | MS.gene39071:CDS | 45.0% |
| ! | TCATTGCTGGTCTGTAATGG+AGG | + | chr7.4:17772123-17772142 | None:intergenic | 45.0% |
| ! | TTATGTCTTGCAGTGGGCTT+TGG | - | chr7.4:17770074-17770093 | MS.gene39071:CDS | 45.0% |
| !! | AGGTCAGAAAAAGTTGGTGG+AGG | - | chr7.4:17773019-17773038 | MS.gene39071:intron | 45.0% |
| !! | GCTTGGTTTTTGTCCCAGAT+TGG | - | chr7.4:17769797-17769816 | MS.gene39071:intron | 45.0% |
| !! | GTGTTTTTACAGGGAAAGGG+AGG | - | chr7.4:17772558-17772577 | MS.gene39071:CDS | 45.0% |
| !! | TGGCTTTGATGCGGATCAAA+AGG | - | chr7.4:17768748-17768767 | MS.gene39071:intron | 45.0% |
| !! | TGTTGACTTAGCACAAGTGC+TGG | - | chr7.4:17773097-17773116 | MS.gene39071:intron | 45.0% |
| !! | TTTTAGGAGTTTGGAGGGGA+GGG | - | chr7.4:17772863-17772882 | MS.gene39071:intron | 45.0% |
| !! | TTTTTAGGAGTTTGGAGGGG+AGG | - | chr7.4:17772862-17772881 | MS.gene39071:intron | 45.0% |
| !!! | GACTGTTTTTACGCTCCTGA+AGG | - | chr7.4:17771555-17771574 | MS.gene39071:intron | 45.0% |
| AAAGCCGTTGAAGAGAACGG+CGG | - | chr7.4:17768054-17768073 | MS.gene39071:CDS | 50.0% | |
| AACGGCGGTCAAGTTCACAT+CGG | - | chr7.4:17768069-17768088 | MS.gene39071:CDS | 50.0% | |
| AGATCCACTCTCAACAGGGT+TGG | + | chr7.4:17771881-17771900 | None:intergenic | 50.0% | |
| AGCCACCACAAATCCCAATC+TGG | + | chr7.4:17769814-17769833 | None:intergenic | 50.0% | |
| AGCGCAACATAGCCAGGAAA+AGG | - | chr7.4:17771933-17771952 | MS.gene39071:intron | 50.0% | |
| AGTCCAAGGGAGGAAGATTC+TGG | - | chr7.4:17769399-17769418 | MS.gene39071:CDS | 50.0% | |
| CACCACGTTATGTCTTGCAG+TGG | - | chr7.4:17770067-17770086 | MS.gene39071:CDS | 50.0% | |
| GCAATGCTCAGATGAGCATC+AGG | - | chr7.4:17770137-17770156 | MS.gene39071:intron | 50.0% | |
| GCCACCACAAATCCCAATCT+GGG | + | chr7.4:17769813-17769832 | None:intergenic | 50.0% | |
| GTGAAAGACACTGAAGCTGC+GGG | + | chr7.4:17770517-17770536 | None:intergenic | 50.0% | |
| TCCCAGATTGGGATTTGTGG+TGG | - | chr7.4:17769809-17769828 | MS.gene39071:intron | 50.0% | |
| TGACCAGAATCTTCCTCCCT+TGG | + | chr7.4:17769405-17769424 | None:intergenic | 50.0% | |
| TTGACCGCCGTTCTCTTCAA+CGG | + | chr7.4:17768061-17768080 | None:intergenic | 50.0% | |
| TTGAGCACCTCCTGTTCTTC+AGG | + | chr7.4:17773617-17773636 | None:intergenic | 50.0% | |
| TTGATCCGCATCAAAGCCAG+AGG | + | chr7.4:17768747-17768766 | None:intergenic | 50.0% | |
| ! | GCAGCAAGTGAAGGCTTGTT+TGG | + | chr7.4:17768696-17768715 | None:intergenic | 50.0% |
| !! | ACTTGCCTCTGGCTTTGATG+CGG | - | chr7.4:17768739-17768758 | MS.gene39071:intron | 50.0% |
| !! | AGTTGGTGGAGGCATCCAAT+AGG | - | chr7.4:17773030-17773049 | MS.gene39071:intron | 50.0% |
| !!! | TGTTTTGACTGTGTAGCGGC+AGG | + | chr7.4:17772045-17772064 | None:intergenic | 50.0% |
| CTCAACAGCGCAACATAGCC+AGG | - | chr7.4:17771927-17771946 | MS.gene39071:intron | 55.0% | |
| GAGTCCAACCCTGTTGAGAG+TGG | - | chr7.4:17771874-17771893 | MS.gene39071:intron | 55.0% | |
| GCCCACTGCAAGACATAACG+TGG | + | chr7.4:17770072-17770091 | None:intergenic | 55.0% | |
| GCGCGTTTGCTTCGAGATTG+CGG | - | chr7.4:17773154-17773173 | MS.gene39071:intron | 55.0% | |
| GGGCTCCAGAGTATAAGGTC+TGG | - | chr7.4:17769149-17769168 | MS.gene39071:intron | 55.0% | |
| ! | GAGTTTGGAGGGGAGGGTTT+TGG | - | chr7.4:17772869-17772888 | MS.gene39071:intron | 55.0% |
| ! | GCGGAAATAGGTGTCGCGAT+AGG | + | chr7.4:17768011-17768030 | None:intergenic | 55.0% |
| ! | GTGAAGGCTTGTTTGGGCAG+AGG | + | chr7.4:17768689-17768708 | None:intergenic | 55.0% |
| !! | TTTGGAGGGGAGGGTTTTGG+AGG | - | chr7.4:17772872-17772891 | MS.gene39071:intron | 55.0% |
| !!! | TTGGAGGGGAGGGTTTTGGA+GGG | - | chr7.4:17772873-17772892 | MS.gene39071:intron | 55.0% |
| ! | GCGACGCACCGTGAGAGTAT+TGG | + | chr7.4:17768807-17768826 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 17767976 | 17773670 | 17767976 | ID=MS.gene39071 |
| chr7.4 | mRNA | 17767976 | 17773670 | 17767976 | ID=MS.gene39071.t1;Parent=MS.gene39071 |
| chr7.4 | exon | 17773497 | 17773670 | 17773497 | ID=MS.gene39071.t1.exon1;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17773497 | 17773670 | 17773497 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17773368 | 17773410 | 17773368 | ID=MS.gene39071.t1.exon2;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17773368 | 17773410 | 17773368 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17772877 | 17772998 | 17772877 | ID=MS.gene39071.t1.exon3;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17772877 | 17772998 | 17772877 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17772481 | 17772588 | 17772481 | ID=MS.gene39071.t1.exon4;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17772481 | 17772588 | 17772481 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17771415 | 17771559 | 17771415 | ID=MS.gene39071.t1.exon5;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17771415 | 17771559 | 17771415 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17771183 | 17771335 | 17771183 | ID=MS.gene39071.t1.exon6;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17771183 | 17771335 | 17771183 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17769986 | 17770120 | 17769986 | ID=MS.gene39071.t1.exon7;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17769986 | 17770120 | 17769986 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17769300 | 17769786 | 17769300 | ID=MS.gene39071.t1.exon8;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17769300 | 17769786 | 17769300 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17768934 | 17769076 | 17768934 | ID=MS.gene39071.t1.exon9;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17768934 | 17769076 | 17768934 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| chr7.4 | exon | 17767976 | 17768625 | 17767976 | ID=MS.gene39071.t1.exon10;Parent=MS.gene39071.t1 |
| chr7.4 | CDS | 17767976 | 17768625 | 17767976 | ID=cds.MS.gene39071.t1;Parent=MS.gene39071.t1 |
| Gene Sequence |
| Protein sequence |
