Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39137.t1 | XP_003625034.1 | 93.7 | 429 | 21 | 3 | 1 | 426 | 1 | 426 | 1.60E-213 | 751.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39137.t1 | Q9FLE8 | 30.6 | 379 | 225 | 10 | 64 | 425 | 32 | 389 | 3.8e-38 | 160.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39137.t1 | A2Q2Z6 | 93.7 | 429 | 21 | 3 | 1 | 426 | 1 | 426 | 1.2e-213 | 751.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051663 | MS.gene39137 | 0.800551 | 1.37E-48 | -1.69E-46 |
MS.gene057260 | MS.gene39137 | 0.815485 | 9.02E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39137.t1 | MTR_7g090230 | 96.037 | 429 | 11 | 3 | 1 | 426 | 1 | 426 | 0.0 | 841 |
MS.gene39137.t1 | MTR_1g051180 | 52.955 | 440 | 118 | 11 | 1 | 426 | 1 | 365 | 5.23e-133 | 387 |
MS.gene39137.t1 | MTR_8g038440 | 65.806 | 155 | 51 | 1 | 273 | 425 | 101 | 255 | 4.20e-69 | 219 |
MS.gene39137.t1 | MTR_3g017490 | 63.158 | 152 | 55 | 1 | 273 | 424 | 110 | 260 | 9.54e-68 | 217 |
MS.gene39137.t1 | MTR_7g104720 | 34.184 | 392 | 209 | 12 | 75 | 425 | 22 | 405 | 1.23e-49 | 173 |
MS.gene39137.t1 | MTR_3g465550 | 47.305 | 167 | 84 | 3 | 256 | 420 | 64 | 228 | 2.53e-48 | 165 |
MS.gene39137.t1 | MTR_5g083110 | 51.592 | 157 | 73 | 3 | 268 | 424 | 85 | 238 | 1.67e-47 | 163 |
MS.gene39137.t1 | MTR_5g072400 | 40.284 | 211 | 116 | 4 | 221 | 424 | 46 | 253 | 1.04e-45 | 159 |
MS.gene39137.t1 | MTR_6g011640 | 28.767 | 438 | 193 | 14 | 64 | 425 | 3 | 397 | 2.18e-43 | 157 |
MS.gene39137.t1 | MTR_7g010090 | 31.092 | 357 | 162 | 13 | 90 | 425 | 139 | 432 | 2.05e-39 | 147 |
MS.gene39137.t1 | MTR_7g106500 | 44.375 | 160 | 79 | 2 | 274 | 425 | 122 | 279 | 2.15e-38 | 140 |
MS.gene39137.t1 | MTR_3g071510 | 43.085 | 188 | 98 | 6 | 239 | 424 | 54 | 234 | 2.71e-38 | 139 |
MS.gene39137.t1 | MTR_1g090400 | 43.046 | 151 | 83 | 2 | 274 | 424 | 221 | 368 | 5.78e-37 | 139 |
MS.gene39137.t1 | MTR_8g099665 | 39.130 | 161 | 84 | 3 | 274 | 424 | 211 | 367 | 6.81e-33 | 127 |
MS.gene39137.t1 | MTR_8g106900 | 41.026 | 156 | 86 | 4 | 274 | 424 | 119 | 273 | 9.75e-31 | 119 |
MS.gene39137.t1 | MTR_3g030520 | 38.608 | 158 | 80 | 3 | 285 | 425 | 142 | 299 | 1.96e-26 | 108 |
MS.gene39137.t1 | MTR_5g048870 | 40.230 | 87 | 50 | 1 | 279 | 363 | 70 | 156 | 6.84e-14 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39137.t1 | AT2G41330 | 50.000 | 390 | 154 | 10 | 53 | 425 | 36 | 401 | 1.84e-112 | 336 |
MS.gene39137.t1 | AT3G57070 | 48.737 | 396 | 174 | 8 | 48 | 425 | 32 | 416 | 4.78e-112 | 335 |
MS.gene39137.t1 | AT5G13810 | 64.162 | 173 | 60 | 2 | 254 | 426 | 104 | 274 | 4.33e-72 | 228 |
MS.gene39137.t1 | AT5G39865 | 31.842 | 380 | 219 | 13 | 64 | 425 | 32 | 389 | 5.28e-48 | 169 |
MS.gene39137.t1 | AT5G58530 | 48.125 | 160 | 73 | 3 | 273 | 424 | 108 | 265 | 7.59e-45 | 157 |
MS.gene39137.t1 | AT5G03870 | 31.472 | 394 | 190 | 14 | 76 | 424 | 25 | 383 | 7.00e-40 | 147 |
MS.gene39137.t1 | AT5G06470 | 41.772 | 158 | 81 | 3 | 274 | 424 | 85 | 238 | 4.47e-37 | 135 |
MS.gene39137.t1 | AT4G10630 | 31.165 | 369 | 173 | 14 | 75 | 424 | 27 | 333 | 9.29e-37 | 137 |
MS.gene39137.t1 | AT3G28850 | 41.477 | 176 | 74 | 3 | 279 | 425 | 252 | 427 | 1.17e-36 | 139 |
MS.gene39137.t1 | AT1G64500 | 41.772 | 158 | 85 | 2 | 274 | 424 | 208 | 365 | 7.01e-36 | 135 |
MS.gene39137.t1 | AT1G32760 | 42.197 | 173 | 92 | 4 | 258 | 424 | 143 | 313 | 1.49e-33 | 128 |
MS.gene39137.t1 | AT3G11773 | 42.143 | 140 | 77 | 3 | 285 | 424 | 14 | 149 | 1.02e-32 | 121 |
MS.gene39137.t1 | AT5G01420 | 38.816 | 152 | 89 | 3 | 274 | 424 | 252 | 400 | 2.53e-30 | 121 |
MS.gene39137.t1 | AT3G11773 | 40.179 | 112 | 63 | 3 | 313 | 424 | 92 | 199 | 2.98e-22 | 94.4 |
Find 55 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGTTTCTGTTAGCAACTA+TGG | 0.271791 | 7.4:-18638936 | None:intergenic |
TTTCAATGGATTCATCTTAT+AGG | 0.287479 | 7.4:+18639854 | MS.gene39137:CDS |
TGTGTTCATTGTAATGAAAA+TGG | 0.321593 | 7.4:+18640135 | MS.gene39137:CDS |
TGATCATGAGGGGTAAAGTT+AGG | 0.340853 | 7.4:-18639193 | None:intergenic |
TTGAAACAATTGAATGAATC+TGG | 0.363003 | 7.4:+18639967 | MS.gene39137:CDS |
AGAAGCTTTGCTTGCTAAGT+TGG | 0.365047 | 7.4:+18639546 | MS.gene39137:CDS |
TGTTTATCTGAGAAACTCAT+TGG | 0.370099 | 7.4:-18639367 | None:intergenic |
AAGGAGTTGCAGAATGCATT+TGG | 0.393748 | 7.4:+18639877 | MS.gene39137:CDS |
AAAGAAGAACAAGGATTCAT+AGG | 0.402640 | 7.4:-18639679 | None:intergenic |
GATGAATAAGAGGCATTGTA+AGG | 0.415383 | 7.4:-18639081 | None:intergenic |
AAAGAAACAGAAGGTGTTGT+TGG | 0.422488 | 7.4:-18638965 | None:intergenic |
TTTCAGATGTGTAAGGTCAA+TGG | 0.435956 | 7.4:+18639648 | MS.gene39137:CDS |
TCACTCACTTCCACTACCTA+TGG | 0.439023 | 7.4:+18639142 | MS.gene39137:CDS |
GTGAGATGGGGTTGATCATG+AGG | 0.444128 | 7.4:-18639205 | None:intergenic |
GTTGGAGGGTGATGAATAAG+AGG | 0.449999 | 7.4:-18639091 | None:intergenic |
GTAATAATTGCAATGGTAGC+AGG | 0.462789 | 7.4:+18640076 | MS.gene39137:CDS |
CTGTAACTCCAAGCAACACT+TGG | 0.466501 | 7.4:-18639571 | None:intergenic |
AAGAACAAGGTAAATTGAAA+AGG | 0.483693 | 7.4:+18640112 | MS.gene39137:CDS |
CATCAACACTTGGGAACTCA+TGG | 0.487477 | 7.4:+18639273 | MS.gene39137:CDS |
AGTTGGATCCAAGTGTTGCT+TGG | 0.490779 | 7.4:+18639563 | MS.gene39137:CDS |
CTACCATTGCAATTATTACA+AGG | 0.490905 | 7.4:-18640072 | None:intergenic |
CAAGTGTTGATGACAGAATC+TGG | 0.492141 | 7.4:-18639262 | None:intergenic |
CAGATTCTGTCATCAACACT+TGG | 0.496185 | 7.4:+18639263 | MS.gene39137:CDS |
TTGACCTTACACATCTGAAA+AGG | 0.497664 | 7.4:-18639645 | None:intergenic |
GAGAAGAGAACCATAGGTAG+TGG | 0.505781 | 7.4:-18639152 | None:intergenic |
GATCATGAGGGGTAAAGTTA+GGG | 0.512539 | 7.4:-18639192 | None:intergenic |
TGGTAGCAGGAAAGTGTTTG+AGG | 0.513533 | 7.4:+18640089 | MS.gene39137:CDS |
AATGGATTCATCTTATAGGA+AGG | 0.527593 | 7.4:+18639858 | MS.gene39137:CDS |
TGAGATGGGGTTGATCATGA+GGG | 0.532269 | 7.4:-18639204 | None:intergenic |
TGATGAAAGAGATATTTCAA+TGG | 0.533526 | 7.4:+18639840 | MS.gene39137:CDS |
AATTAGGAGAAGAGAACCAT+AGG | 0.536814 | 7.4:-18639158 | None:intergenic |
ATCAGTAGTGACATTGCCAC+AGG | 0.554763 | 7.4:+18639906 | MS.gene39137:CDS |
AAAATCTCAAGAAACCACTT+TGG | 0.555258 | 7.4:+18639509 | MS.gene39137:CDS |
GAAGATTGAAAAGAAACAGA+AGG | 0.555642 | 7.4:-18638974 | None:intergenic |
TCTGATAAATGCTGCCAAAG+TGG | 0.561325 | 7.4:-18639523 | None:intergenic |
TAGTGGAAGTGAGTGAAACA+AGG | 0.572068 | 7.4:-18639135 | None:intergenic |
ACAAACCAAGGATCTTGAGT+TGG | 0.577028 | 7.4:-18640018 | None:intergenic |
CAGATAAACACAGTTCATGC+AGG | 0.580945 | 7.4:+18639380 | MS.gene39137:CDS |
GAGTTGCAGAATGCATTTGG+TGG | 0.586689 | 7.4:+18639880 | MS.gene39137:CDS |
GAATTAGCTAGAATGTTGAA+AGG | 0.590447 | 7.4:+18639991 | MS.gene39137:CDS |
AACACTTGGGAACTCATGGA+TGG | 0.595857 | 7.4:+18639277 | MS.gene39137:CDS |
TGGTTTGTTTGTGACAAATG+TGG | 0.596999 | 7.4:+18640033 | MS.gene39137:CDS |
TTTATCAGAGGGAAGCATGT+GGG | 0.599499 | 7.4:+18639931 | MS.gene39137:CDS |
GAAATCTTCAGAAACAGTGA+TGG | 0.600720 | 7.4:+18639459 | MS.gene39137:CDS |
GTGCCTTGTAATAATTGCAA+TGG | 0.616885 | 7.4:+18640069 | MS.gene39137:CDS |
ATGAATAAGAGGCATTGTAA+GGG | 0.620378 | 7.4:-18639080 | None:intergenic |
GCATTGTCATCAAGACAACT+AGG | 0.624676 | 7.4:+18639598 | MS.gene39137:CDS |
GTTTATTGCACAAGTTTGCG+AGG | 0.649260 | 7.4:+18639751 | MS.gene39137:CDS |
AGATTCTGTCATCAACACTT+GGG | 0.657274 | 7.4:+18639264 | MS.gene39137:CDS |
CATTTGTCACAAACAAACCA+AGG | 0.669189 | 7.4:-18640030 | None:intergenic |
TTATCAAACAAAGAAGAACA+AGG | 0.689315 | 7.4:-18639688 | None:intergenic |
GAGATGGGGTTGATCATGAG+GGG | 0.692266 | 7.4:-18639203 | None:intergenic |
ATGAAGATTGTTGTGCAGTG+AGG | 0.704749 | 7.4:+18639788 | MS.gene39137:CDS |
AAAGTGTTTGAGGAAGAACA+AGG | 0.708450 | 7.4:+18640099 | MS.gene39137:CDS |
TTGTCATCAAGACAACTAGG+TGG | 0.763609 | 7.4:+18639601 | MS.gene39137:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAGAACAAGGTAAATTGAAA+AGG | + | chr7.4:18640112-18640131 | MS.gene39137:CDS | 25.0% |
! | TGATGAAAGAGATATTTCAA+TGG | + | chr7.4:18639840-18639859 | MS.gene39137:CDS | 25.0% |
! | TGTGTTCATTGTAATGAAAA+TGG | + | chr7.4:18640135-18640154 | MS.gene39137:CDS | 25.0% |
! | TTATCAAACAAAGAAGAACA+AGG | - | chr7.4:18639691-18639710 | None:intergenic | 25.0% |
! | TTGAAACAATTGAATGAATC+TGG | + | chr7.4:18639967-18639986 | MS.gene39137:CDS | 25.0% |
!! | TTTCAATGGATTCATCTTAT+AGG | + | chr7.4:18639854-18639873 | MS.gene39137:CDS | 25.0% |
!!! | TGGTTTCTTGAGATTTTTTT+TGG | - | chr7.4:18639506-18639525 | None:intergenic | 25.0% |
!!! | TTCTTCATTTTGAGAAGTTT+TGG | - | chr7.4:18639230-18639249 | None:intergenic | 25.0% |
AAAATCTCAAGAAACCACTT+TGG | + | chr7.4:18639509-18639528 | MS.gene39137:CDS | 30.0% | |
AAAGAAGAACAAGGATTCAT+AGG | - | chr7.4:18639682-18639701 | None:intergenic | 30.0% | |
ACTCATTGGATTGTCAAAAA+AGG | - | chr7.4:18639356-18639375 | None:intergenic | 30.0% | |
ATTGGATTGTCAAAAAAGGA+AGG | - | chr7.4:18639352-18639371 | None:intergenic | 30.0% | |
CTACCATTGCAATTATTACA+AGG | - | chr7.4:18640075-18640094 | None:intergenic | 30.0% | |
GAAGATTGAAAAGAAACAGA+AGG | - | chr7.4:18638977-18638996 | None:intergenic | 30.0% | |
GAATTAGCTAGAATGTTGAA+AGG | + | chr7.4:18639991-18640010 | MS.gene39137:CDS | 30.0% | |
TGTTTATCTGAGAAACTCAT+TGG | - | chr7.4:18639370-18639389 | None:intergenic | 30.0% | |
! | AATGGATTCATCTTATAGGA+AGG | + | chr7.4:18639858-18639877 | MS.gene39137:CDS | 30.0% |
!! | ATGAATAAGAGGCATTGTAA+GGG | - | chr7.4:18639083-18639102 | None:intergenic | 30.0% |
!!! | AACTATGGTTGTTGTTTTTG+AGG | - | chr7.4:18638924-18638943 | None:intergenic | 30.0% |
AATTAGGAGAAGAGAACCAT+AGG | - | chr7.4:18639161-18639180 | None:intergenic | 35.0% | |
AGATTCTGTCATCAACACTT+GGG | + | chr7.4:18639264-18639283 | MS.gene39137:CDS | 35.0% | |
CATTTGTCACAAACAAACCA+AGG | - | chr7.4:18640033-18640052 | None:intergenic | 35.0% | |
GAAATCTTCAGAAACAGTGA+TGG | + | chr7.4:18639459-18639478 | MS.gene39137:CDS | 35.0% | |
GTAATAATTGCAATGGTAGC+AGG | + | chr7.4:18640076-18640095 | MS.gene39137:CDS | 35.0% | |
GTGCCTTGTAATAATTGCAA+TGG | + | chr7.4:18640069-18640088 | MS.gene39137:CDS | 35.0% | |
TTGACCTTACACATCTGAAA+AGG | - | chr7.4:18639648-18639667 | None:intergenic | 35.0% | |
TTTCAGATGTGTAAGGTCAA+TGG | + | chr7.4:18639648-18639667 | MS.gene39137:CDS | 35.0% | |
! | AAAGTGTTTGAGGAAGAACA+AGG | + | chr7.4:18640099-18640118 | MS.gene39137:CDS | 35.0% |
! | AAGAGTTTGTGTCTTTTACC+TGG | + | chr7.4:18639709-18639728 | MS.gene39137:CDS | 35.0% |
! | ACTATTCTGTTTTCAGTACC+AGG | - | chr7.4:18639730-18639749 | None:intergenic | 35.0% |
! | AGAACCTTTTCAGATGTGTA+AGG | + | chr7.4:18639641-18639660 | MS.gene39137:CDS | 35.0% |
! | TGTGTTTCTGTTAGCAACTA+TGG | - | chr7.4:18638939-18638958 | None:intergenic | 35.0% |
!! | AAAGAAACAGAAGGTGTTGT+TGG | - | chr7.4:18638968-18638987 | None:intergenic | 35.0% |
!! | GATGAATAAGAGGCATTGTA+AGG | - | chr7.4:18639084-18639103 | None:intergenic | 35.0% |
!! | TAGGGACTTTTTGGTCAATT+AGG | - | chr7.4:18639177-18639196 | None:intergenic | 35.0% |
!! | TGGTTTGTTTGTGACAAATG+TGG | + | chr7.4:18640033-18640052 | MS.gene39137:CDS | 35.0% |
!! | TTGAGAAGTTTTGGTGAGAT+GGG | - | chr7.4:18639221-18639240 | None:intergenic | 35.0% |
!! | TTTGAGAAGTTTTGGTGAGA+TGG | - | chr7.4:18639222-18639241 | None:intergenic | 35.0% |
AAGGAGTTGCAGAATGCATT+TGG | + | chr7.4:18639877-18639896 | MS.gene39137:CDS | 40.0% | |
ACAAACCAAGGATCTTGAGT+TGG | - | chr7.4:18640021-18640040 | None:intergenic | 40.0% | |
ATGAAGATTGTTGTGCAGTG+AGG | + | chr7.4:18639788-18639807 | MS.gene39137:CDS | 40.0% | |
CAGATAAACACAGTTCATGC+AGG | + | chr7.4:18639380-18639399 | MS.gene39137:CDS | 40.0% | |
CAGATTCTGTCATCAACACT+TGG | + | chr7.4:18639263-18639282 | MS.gene39137:CDS | 40.0% | |
GATCATGAGGGGTAAAGTTA+GGG | - | chr7.4:18639195-18639214 | None:intergenic | 40.0% | |
GCATTGTCATCAAGACAACT+AGG | + | chr7.4:18639598-18639617 | MS.gene39137:CDS | 40.0% | |
GTTTATTGCACAAGTTTGCG+AGG | + | chr7.4:18639751-18639770 | MS.gene39137:CDS | 40.0% | |
TAGTGGAAGTGAGTGAAACA+AGG | - | chr7.4:18639138-18639157 | None:intergenic | 40.0% | |
TCTGATAAATGCTGCCAAAG+TGG | - | chr7.4:18639526-18639545 | None:intergenic | 40.0% | |
TGATCATGAGGGGTAAAGTT+AGG | - | chr7.4:18639196-18639215 | None:intergenic | 40.0% | |
TTCCCTCTGATAAAAACCTG+TGG | - | chr7.4:18639925-18639944 | None:intergenic | 40.0% | |
TTGTCATCAAGACAACTAGG+TGG | + | chr7.4:18639601-18639620 | MS.gene39137:CDS | 40.0% | |
! | AGAAGCTTTGCTTGCTAAGT+TGG | + | chr7.4:18639546-18639565 | MS.gene39137:CDS | 40.0% |
! | AGGGACAAAGCTTTTCTAAC+TGG | - | chr7.4:18639064-18639083 | None:intergenic | 40.0% |
! | GACAAAGCTTTTCTAACTGG+TGG | - | chr7.4:18639061-18639080 | None:intergenic | 40.0% |
! | GGGTAAAGTTAGGGACTTTT+TGG | - | chr7.4:18639186-18639205 | None:intergenic | 40.0% |
! | GTTTTCCAACTCAAGATCCT+TGG | + | chr7.4:18640013-18640032 | MS.gene39137:CDS | 40.0% |
! | TGCAGGTACACAACTTTTGA+TGG | + | chr7.4:18639397-18639416 | MS.gene39137:CDS | 40.0% |
! | TGCAGTGAGGATGATTTTGA+GGG | + | chr7.4:18639801-18639820 | MS.gene39137:CDS | 40.0% |
! | TGCCACAGGTTTTTATCAGA+GGG | + | chr7.4:18639920-18639939 | MS.gene39137:CDS | 40.0% |
! | TTGCCACAGGTTTTTATCAG+AGG | + | chr7.4:18639919-18639938 | MS.gene39137:CDS | 40.0% |
! | TTTATCAGAGGGAAGCATGT+GGG | + | chr7.4:18639931-18639950 | MS.gene39137:CDS | 40.0% |
!! | CAAGTGTTGATGACAGAATC+TGG | - | chr7.4:18639265-18639284 | None:intergenic | 40.0% |
!! | TGAGAAGTTTTGGTGAGATG+GGG | - | chr7.4:18639220-18639239 | None:intergenic | 40.0% |
!! | TTTTATCAGAGGGAAGCATG+TGG | + | chr7.4:18639930-18639949 | MS.gene39137:CDS | 40.0% |
!!! | GTGATGAGTGTCACCTTTTT+TGG | - | chr7.4:18639116-18639135 | None:intergenic | 40.0% |
!!! | TGAGTGTCACCTTTTTTGGT+TGG | - | chr7.4:18639112-18639131 | None:intergenic | 40.0% |
!!! | TGTCACCTTTTTTGGTTGGA+GGG | - | chr7.4:18639108-18639127 | None:intergenic | 40.0% |
AACACTTGGGAACTCATGGA+TGG | + | chr7.4:18639277-18639296 | MS.gene39137:CDS | 45.0% | |
ATCAGTAGTGACATTGCCAC+AGG | + | chr7.4:18639906-18639925 | MS.gene39137:CDS | 45.0% | |
CATCAACACTTGGGAACTCA+TGG | + | chr7.4:18639273-18639292 | MS.gene39137:CDS | 45.0% | |
CATCACCCTCCAACCAAAAA+AGG | + | chr7.4:18639100-18639119 | MS.gene39137:CDS | 45.0% | |
CTGTAACTCCAAGCAACACT+TGG | - | chr7.4:18639574-18639593 | None:intergenic | 45.0% | |
GAGAAGAGAACCATAGGTAG+TGG | - | chr7.4:18639155-18639174 | None:intergenic | 45.0% | |
GAGTTGCAGAATGCATTTGG+TGG | + | chr7.4:18639880-18639899 | MS.gene39137:CDS | 45.0% | |
GTTGGAGGGTGATGAATAAG+AGG | - | chr7.4:18639094-18639113 | None:intergenic | 45.0% | |
TCACTCACTTCCACTACCTA+TGG | + | chr7.4:18639142-18639161 | MS.gene39137:CDS | 45.0% | |
! | AGTTGGATCCAAGTGTTGCT+TGG | + | chr7.4:18639563-18639582 | MS.gene39137:CDS | 45.0% |
! | GCAGTGAGGATGATTTTGAG+GGG | + | chr7.4:18639802-18639821 | MS.gene39137:CDS | 45.0% |
! | GTGCAGTGAGGATGATTTTG+AGG | + | chr7.4:18639800-18639819 | MS.gene39137:CDS | 45.0% |
! | TGAGATGGGGTTGATCATGA+GGG | - | chr7.4:18639207-18639226 | None:intergenic | 45.0% |
!! | TGGTAGCAGGAAAGTGTTTG+AGG | + | chr7.4:18640089-18640108 | MS.gene39137:CDS | 45.0% |
!!! | GTGTCACCTTTTTTGGTTGG+AGG | - | chr7.4:18639109-18639128 | None:intergenic | 45.0% |
! | GAGATGGGGTTGATCATGAG+GGG | - | chr7.4:18639206-18639225 | None:intergenic | 50.0% |
! | GTGAGATGGGGTTGATCATG+AGG | - | chr7.4:18639208-18639227 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 18638908 | 18640188 | 18638908 | ID=MS.gene39137 |
chr7.4 | mRNA | 18638908 | 18640188 | 18638908 | ID=MS.gene39137.t1;Parent=MS.gene39137 |
chr7.4 | exon | 18638908 | 18640188 | 18638908 | ID=MS.gene39137.t1.exon1;Parent=MS.gene39137.t1 |
chr7.4 | CDS | 18638908 | 18640188 | 18638908 | ID=cds.MS.gene39137.t1;Parent=MS.gene39137.t1 |
Gene Sequence |
Protein sequence |