Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39670.t1 | XP_003626806.1 | 93.8 | 465 | 29 | 0 | 1 | 465 | 1 | 465 | 4.40E-257 | 896.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39670.t1 | Q9M903 | 35.2 | 494 | 274 | 13 | 1 | 464 | 1 | 478 | 4.7e-66 | 253.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39670.t1 | G7LDE8 | 93.8 | 465 | 29 | 0 | 1 | 465 | 1 | 465 | 3.2e-257 | 896.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052789 | MS.gene39670 | 0.808245 | 3.40E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39670.t1 | MTR_8g009290 | 93.763 | 465 | 29 | 0 | 1 | 465 | 1 | 465 | 0.0 | 902 |
| MS.gene39670.t1 | MTR_2g035830 | 36.907 | 485 | 267 | 14 | 1 | 464 | 1 | 467 | 5.84e-79 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39670.t1 | AT2G44640 | 52.321 | 474 | 194 | 8 | 1 | 465 | 1 | 451 | 4.56e-153 | 443 |
| MS.gene39670.t1 | AT3G06960 | 35.223 | 494 | 274 | 13 | 1 | 464 | 1 | 478 | 9.97e-77 | 248 |
| MS.gene39670.t1 | AT3G06960 | 37.829 | 304 | 177 | 6 | 1 | 294 | 1 | 302 | 7.20e-54 | 184 |
Find 126 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTGTGCTTCCTGGATT+TGG | 0.253326 | 8.3:+79740698 | MS.gene39670:CDS |
| CAGGTAGCTCCTGTGCTTCC+TGG | 0.270782 | 8.3:+79740692 | MS.gene39670:intron |
| TTGCTTGGTATTCACCAAAA+AGG | 0.275530 | 8.3:+79741816 | MS.gene39670:CDS |
| CGAGTCTATATCAGTTGATT+TGG | 0.278646 | 8.3:+79739239 | MS.gene39670:CDS |
| CAGCCATTGATTCATCATTC+TGG | 0.279261 | 8.3:+79736441 | MS.gene39670:CDS |
| CAAAGAATCAATCGAAATTC+TGG | 0.282288 | 8.3:-79741699 | None:intergenic |
| CCTTCAACATCTGTGTTGTT+TGG | 0.283212 | 8.3:+79738789 | MS.gene39670:CDS |
| GGAAGATTCACAAAGAAGTT+TGG | 0.289114 | 8.3:+79740832 | MS.gene39670:CDS |
| GAAGATTCACAAAGAAGTTT+GGG | 0.296464 | 8.3:+79740833 | MS.gene39670:CDS |
| GGCATCCCTTGCGGCTCGTC+GGG | 0.306127 | 8.3:+79739260 | MS.gene39670:CDS |
| GTACCTCATGCAGCAGTATC+TGG | 0.307606 | 8.3:+79739486 | MS.gene39670:CDS |
| GACTCCACATCGCTAGCTTT+AGG | 0.309022 | 8.3:-79741782 | None:intergenic |
| ATCTGTGTTGTTTGGTTTAG+AGG | 0.310418 | 8.3:+79738797 | MS.gene39670:CDS |
| TCCACATTACCACGGACTTA+TGG | 0.315616 | 8.3:+79739464 | MS.gene39670:CDS |
| ACTCCACATCGCTAGCTTTA+GGG | 0.317436 | 8.3:-79741781 | None:intergenic |
| GCAGCAGTATCTGGAATTAT+TGG | 0.335779 | 8.3:+79739495 | MS.gene39670:CDS |
| CTTTGTGGTCAACAAACAAC+TGG | 0.341171 | 8.3:-79739197 | None:intergenic |
| TTTCTTCTCTTTGACACAGC+TGG | 0.345108 | 8.3:-79740754 | None:intergenic |
| AAAGGAACCATACTCCTTCT+TGG | 0.350882 | 8.3:-79736633 | None:intergenic |
| TTGACCACAAAGGAAGATAC+TGG | 0.352098 | 8.3:+79739208 | MS.gene39670:CDS |
| CGGGGATTGCGATACCGCTT+TGG | 0.356101 | 8.3:+79739279 | MS.gene39670:CDS |
| CGGAAAGAACCTTATTGATT+CGG | 0.383096 | 8.3:+79740723 | MS.gene39670:CDS |
| TATAGGTGGCTTGCAGCAAC+TGG | 0.383507 | 8.3:+79738615 | MS.gene39670:intron |
| GATCCTCTCCCGAATCAATA+AGG | 0.384097 | 8.3:-79740732 | None:intergenic |
| GGGGATTGCGATACCGCTTT+GGG | 0.386728 | 8.3:+79739280 | MS.gene39670:CDS |
| GGTTGGGCCAAGTTTGTTCC+TGG | 0.387086 | 8.3:+79736497 | MS.gene39670:CDS |
| TAACTTAATCTTTCAACAAC+AGG | 0.387771 | 8.3:+79740981 | MS.gene39670:CDS |
| CCTTCTCCCAAGAAGGAGTA+TGG | 0.388810 | 8.3:+79736626 | MS.gene39670:CDS |
| ACTGAAGCGTCAAGAGGAAT+AGG | 0.389532 | 8.3:-79736524 | None:intergenic |
| TTTCGATTGATTCTTTGAAC+AGG | 0.390812 | 8.3:+79741705 | MS.gene39670:CDS |
| GGAAAGAACCTTATTGATTC+GGG | 0.392979 | 8.3:+79740724 | MS.gene39670:CDS |
| AATGTCTAATTGTAGGTTGC+AGG | 0.396953 | 8.3:+79741653 | MS.gene39670:intron |
| CTAGATATATCTTCAGCTTC+CGG | 0.399624 | 8.3:+79740880 | MS.gene39670:CDS |
| AAAGCTAGCGATGTGGAGTC+TGG | 0.420043 | 8.3:+79741785 | MS.gene39670:CDS |
| AGCCATTGATTCATCATTCT+GGG | 0.424530 | 8.3:+79736442 | MS.gene39670:CDS |
| TTCACAAAACCTCGATGGTT+GGG | 0.430228 | 8.3:+79736481 | MS.gene39670:CDS |
| CAACTGGACAATTCCGTCCT+AGG | 0.440660 | 8.3:+79738631 | MS.gene39670:CDS |
| GGAAAATGATGAGTGATATG+AGG | 0.441130 | 8.3:-79736578 | None:intergenic |
| TCACTTCTCCTTGATTTCAC+TGG | 0.444371 | 8.3:+79736665 | MS.gene39670:CDS |
| GAATCTGCTCGAAATACAAC+TGG | 0.446191 | 8.3:-79741677 | None:intergenic |
| ATTCAATCTCTCCACAGTTA+AGG | 0.455924 | 8.3:+79738698 | MS.gene39670:CDS |
| AGAAGTTTGGGGACTTAACC+CGG | 0.462716 | 8.3:+79740845 | MS.gene39670:CDS |
| CTTCACAAAACCTCGATGGT+TGG | 0.467365 | 8.3:+79736480 | MS.gene39670:CDS |
| CATCCCAGTATCTTCCTTTG+TGG | 0.468934 | 8.3:-79739212 | None:intergenic |
| GCTGCAAATGAAATCTTCAA+TGG | 0.468982 | 8.3:-79741741 | None:intergenic |
| GAGAAGTGACTGAAATGAAA+AGG | 0.473027 | 8.3:-79736651 | None:intergenic |
| TGGCATCCCTTGCGGCTCGT+CGG | 0.473221 | 8.3:+79739259 | MS.gene39670:CDS |
| GTTGAAAGATTAAGTTAAGC+CGG | 0.476484 | 8.3:-79740975 | None:intergenic |
| AAGGAACCATACTCCTTCTT+GGG | 0.477484 | 8.3:-79736632 | None:intergenic |
| GTCCCAGAATGATGAATCAA+TGG | 0.487363 | 8.3:-79736444 | None:intergenic |
| CTTGCGAAGAAAATTCTGAA+TGG | 0.488339 | 8.3:+79740904 | MS.gene39670:CDS |
| CTCAGCTCCTTCTCCCAAGA+AGG | 0.491627 | 8.3:+79736619 | MS.gene39670:CDS |
| CCAAACAACACAGATGTTGA+AGG | 0.492018 | 8.3:-79738789 | None:intergenic |
| GTTCTTTCCGTTCCAAATCC+AGG | 0.492275 | 8.3:-79740710 | None:intergenic |
| ACACCGCTGTCTCTACTGCC+AGG | 0.495012 | 8.3:+79739354 | MS.gene39670:CDS |
| ATCATAAGTAACAGCCGCCT+TGG | 0.496861 | 8.3:-79739385 | None:intergenic |
| ATGATAAGATCAAGTACCTC+TGG | 0.501416 | 8.3:+79739403 | MS.gene39670:CDS |
| AACGATGACCAGTGAAATCA+AGG | 0.503727 | 8.3:-79736673 | None:intergenic |
| GAAAATGATGAGTGATATGA+GGG | 0.506868 | 8.3:-79736577 | None:intergenic |
| CTGAAGCGTCAAGAGGAATA+GGG | 0.513543 | 8.3:-79736523 | None:intergenic |
| GATTCTTTGAACAGGAAACA+TGG | 0.515337 | 8.3:+79741713 | MS.gene39670:CDS |
| TCTGTGTTGTTTGGTTTAGA+GGG | 0.522771 | 8.3:+79738798 | MS.gene39670:CDS |
| TTGAAAGATTAAGTTAAGCC+GGG | 0.527812 | 8.3:-79740974 | None:intergenic |
| TGATATGAGGGAGTTGTTGA+TGG | 0.527979 | 8.3:-79736565 | None:intergenic |
| TAAGAACAACGGTAGTCCTC+AGG | 0.529738 | 8.3:+79739308 | MS.gene39670:CDS |
| TTGGGAGAAGGAGCTGAGGA+AGG | 0.531214 | 8.3:-79736614 | None:intergenic |
| TATCTAGACGAGCATCTACC+CGG | 0.531804 | 8.3:-79740864 | None:intergenic |
| TCCTCTTCACAAAACCTCGA+TGG | 0.536756 | 8.3:+79736476 | MS.gene39670:CDS |
| GCCGCCTTGGCACATAACCC+TGG | 0.538068 | 8.3:-79739372 | None:intergenic |
| CCATACTCCTTCTTGGGAGA+AGG | 0.543963 | 8.3:-79736626 | None:intergenic |
| AGGGTCACCAGGAACAAACT+TGG | 0.547546 | 8.3:-79736504 | None:intergenic |
| TTGATTTCACTGGTCATCGT+TGG | 0.548954 | 8.3:+79736675 | MS.gene39670:CDS |
| CAATCCCCGACGAGCCGCAA+GGG | 0.554722 | 8.3:-79739265 | None:intergenic |
| ACCATAAGTCCGTGGTAATG+TGG | 0.556100 | 8.3:-79739465 | None:intergenic |
| CAAATCAACTGATATAGACT+CGG | 0.556932 | 8.3:-79739238 | None:intergenic |
| GAACCTTATTGATTCGGGAG+AGG | 0.559230 | 8.3:+79740729 | MS.gene39670:CDS |
| GATTAAGTTAAGCCGGGGTG+AGG | 0.564997 | 8.3:-79740968 | None:intergenic |
| ATTCTTTGAACAGGAAACAT+GGG | 0.573586 | 8.3:+79741714 | MS.gene39670:CDS |
| CATCATCATCATCAATGGCT+AGG | 0.576200 | 8.3:+79736411 | None:intergenic |
| AGTTGATTTGGCATCCCTTG+CGG | 0.581307 | 8.3:+79739251 | MS.gene39670:CDS |
| GTTCCAAATCCAGGAAGCAC+AGG | 0.585341 | 8.3:-79740701 | None:intergenic |
| TGTGCTTCCTGGATTTGGAA+CGG | 0.585569 | 8.3:+79740703 | MS.gene39670:CDS |
| TTGTTTGGTTTAGAGGGCCA+TGG | 0.586865 | 8.3:+79738804 | MS.gene39670:CDS |
| GCATCCCTTGCGGCTCGTCG+GGG | 0.592046 | 8.3:+79739261 | MS.gene39670:CDS |
| GCAATCCCCGACGAGCCGCA+AGG | 0.592970 | 8.3:-79739266 | None:intergenic |
| TCAAGAGGAATAGGGTCACC+AGG | 0.593510 | 8.3:-79736515 | None:intergenic |
| ATCTTACAGTGGAGGCAGCA+TGG | 0.599269 | 8.3:+79739172 | MS.gene39670:CDS |
| GTTTGCTATACTTTGCAGCA+AGG | 0.605503 | 8.3:+79740811 | MS.gene39670:CDS |
| ACTGCCAGGGTTATGTGCCA+AGG | 0.607980 | 8.3:+79739368 | MS.gene39670:CDS |
| CTTTGCAACGTCCTTAACTG+TGG | 0.610680 | 8.3:-79738709 | None:intergenic |
| TGGGAGAAGGAGCTGAGGAA+GGG | 0.611872 | 8.3:-79736613 | None:intergenic |
| CACCGCTGTCTCTACTGCCA+GGG | 0.614848 | 8.3:+79739355 | MS.gene39670:CDS |
| CTGGAGAAACACGGAGACTG+AGG | 0.616034 | 8.3:+79739422 | MS.gene39670:CDS |
| TTTGTGGTCAACAAACAACT+GGG | 0.617540 | 8.3:-79739196 | None:intergenic |
| CAGTCTCCGTGTTTCTCCAG+AGG | 0.618270 | 8.3:-79739419 | None:intergenic |
| CTGGAAACTGAAGCGTCAAG+AGG | 0.619867 | 8.3:-79736530 | None:intergenic |
| TTAAGCCGGGGTGAGGCTGA+CGG | 0.619931 | 8.3:-79740961 | None:intergenic |
| GAAGTTTGGGGACTTAACCC+GGG | 0.623442 | 8.3:+79740846 | MS.gene39670:CDS |
| GAGGAAGGGATAATGCCAAA+GGG | 0.625924 | 8.3:-79736599 | None:intergenic |
| TGATCACGATCTTACAGTGG+AGG | 0.626341 | 8.3:+79739164 | MS.gene39670:CDS |
| TGAGGAAGGGATAATGCCAA+AGG | 0.630223 | 8.3:-79736600 | None:intergenic |
| TTGATGGCGATAGAGTCTGC+TGG | 0.631814 | 8.3:-79736549 | None:intergenic |
| GCCAGGGTTATGTGCCAAGG+CGG | 0.636658 | 8.3:+79739371 | MS.gene39670:CDS |
| CTTCTTGGGAGAAGGAGCTG+AGG | 0.640737 | 8.3:-79736618 | None:intergenic |
| GGCTTGTTTCCACATTACCA+CGG | 0.643480 | 8.3:+79739456 | MS.gene39670:CDS |
| AACAACCGTCAGCCTCACCC+CGG | 0.648424 | 8.3:+79740956 | MS.gene39670:CDS |
| AAGATTCACAAAGAAGTTTG+GGG | 0.651005 | 8.3:+79740834 | MS.gene39670:CDS |
| ATTCCAGATACTGCTGCATG+AGG | 0.653346 | 8.3:-79739489 | None:intergenic |
| TTCTGATCACGATCTTACAG+TGG | 0.653407 | 8.3:+79739161 | MS.gene39670:CDS |
| ATCTAGACGAGCATCTACCC+GGG | 0.654861 | 8.3:-79740863 | None:intergenic |
| GAGAAACACGGAGACTGAGG+AGG | 0.661282 | 8.3:+79739425 | MS.gene39670:CDS |
| CAAGTACCTCTGGAGAAACA+CGG | 0.661736 | 8.3:+79739413 | MS.gene39670:CDS |
| AAATCAACTGATATAGACTC+GGG | 0.662894 | 8.3:-79739237 | None:intergenic |
| CAGTTGTTTGTTGACCACAA+AGG | 0.665261 | 8.3:+79739198 | MS.gene39670:CDS |
| TGACCACAAAGGAAGATACT+GGG | 0.665611 | 8.3:+79739209 | MS.gene39670:CDS |
| TGAAAGATTAAGTTAAGCCG+GGG | 0.665959 | 8.3:-79740973 | None:intergenic |
| TCAGTTGCATTAGTAGCCTG+AGG | 0.666364 | 8.3:-79739324 | None:intergenic |
| TGTTCTTATGCATCCCAAAG+CGG | 0.671112 | 8.3:-79739293 | None:intergenic |
| TGACCCTAAAGCTAGCGATG+TGG | 0.680404 | 8.3:+79741778 | MS.gene39670:CDS |
| AACCCTGGCAGTAGAGACAG+CGG | 0.710115 | 8.3:-79739357 | None:intergenic |
| CATGAGGTACCATAAGTCCG+TGG | 0.716130 | 8.3:-79739473 | None:intergenic |
| TTTGGGATGCATAAGAACAA+CGG | 0.717493 | 8.3:+79739297 | MS.gene39670:CDS |
| GAGACTGAGGAGGAATACGA+AGG | 0.720894 | 8.3:+79739435 | MS.gene39670:CDS |
| CAAACTTGGCCCAACCATCG+AGG | 0.733200 | 8.3:-79736490 | None:intergenic |
| AGGAGATAAAGCAAACTGTG+AGG | 0.736725 | 8.3:-79738769 | None:intergenic |
| TTGTGGTCAACAAACAACTG+GGG | 0.748911 | 8.3:-79739195 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTGGATTATTTTTTT+TGG | + | chr8.3:79737301-79737320 | MS.gene39670:intron | 10.0% |
| !!! | AAAATTGGATTATTTTTTTT+GGG | + | chr8.3:79737302-79737321 | MS.gene39670:intron | 10.0% |
| !!! | TAATTATTTTTGTTTTGTTA+TGG | + | chr8.3:79740656-79740675 | MS.gene39670:intron | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr8.3:79738012-79738031 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr8.3:79738011-79738030 | MS.gene39670:intron | 15.0% |
| !! | AATCAAATAGTAAATGAAAT+AGG | + | chr8.3:79739853-79739872 | MS.gene39670:intron | 15.0% |
| !! | AATGATTAAAAGAAAAAGAA+TGG | - | chr8.3:79738045-79738064 | None:intergenic | 15.0% |
| !! | GAAATGAAAATACAATATTA+AGG | + | chr8.3:79741619-79741638 | MS.gene39670:intron | 15.0% |
| !! | TCATTTCTTGAATAAAAAAT+AGG | + | chr8.3:79737652-79737671 | MS.gene39670:intron | 15.0% |
| !! | TGTATAATTTGAATTTGAAT+GGG | + | chr8.3:79737512-79737531 | MS.gene39670:intron | 15.0% |
| !! | TTAATTCAATATACTGAAAT+TGG | + | chr8.3:79741544-79741563 | MS.gene39670:intron | 15.0% |
| !! | TTTCATTTACTATTTGATTA+AGG | - | chr8.3:79739852-79739871 | None:intergenic | 15.0% |
| !!! | AAAGAAGCATATAAAAAAAA+CGG | - | chr8.3:79736800-79736819 | None:intergenic | 15.0% |
| !!! | ACATTTTTTTTATAAAAGAG+AGG | + | chr8.3:79740154-79740173 | MS.gene39670:intron | 15.0% |
| !!! | ATATTTTTCAATTTCAGAAA+AGG | - | chr8.3:79739003-79739022 | None:intergenic | 15.0% |
| !!! | ATTTATTGTGTTGATTTTTT+TGG | + | chr8.3:79739960-79739979 | MS.gene39670:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr8.3:79737885-79737904 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTATAAAAGAGA+GGG | + | chr8.3:79740155-79740174 | MS.gene39670:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr8.3:79737988-79738007 | None:intergenic | 15.0% |
| !!! | TCAAACATTTTAATCATAAT+GGG | + | chr8.3:79736760-79736779 | MS.gene39670:intron | 15.0% |
| !!! | TTATATGCTTCTTTAAAAAT+TGG | + | chr8.3:79736806-79736825 | MS.gene39670:intron | 15.0% |
| !!! | TTCAAACATTTTAATCATAA+TGG | + | chr8.3:79736759-79736778 | MS.gene39670:intron | 15.0% |
| !!! | TTTTATAGATTACATAAACA+TGG | - | chr8.3:79738541-79738560 | None:intergenic | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr8.3:79738002-79738021 | MS.gene39670:intron | 20.0% |
| !! | AAGAGAGAATAAAACATAAA+AGG | - | chr8.3:79739673-79739692 | None:intergenic | 20.0% |
| !! | AATAAACTCTTATTGGATTA+AGG | - | chr8.3:79740111-79740130 | None:intergenic | 20.0% |
| !! | AATGAAACTTTAGACAATTT+AGG | + | chr8.3:79736894-79736913 | MS.gene39670:intron | 20.0% |
| !! | AGAAAAAAATGTTAACAAAC+AGG | + | chr8.3:79737175-79737194 | MS.gene39670:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr8.3:79737925-79737944 | None:intergenic | 20.0% |
| !! | AGAGAGAATAAAACATAAAA+GGG | - | chr8.3:79739672-79739691 | None:intergenic | 20.0% |
| !! | ATATTTATAAGTTAGTCCAA+CGG | - | chr8.3:79737056-79737075 | None:intergenic | 20.0% |
| !! | ATGTAATCTATAAAACATCA+TGG | + | chr8.3:79738546-79738565 | MS.gene39670:intron | 20.0% |
| !! | CAAAGATAAAATAGTCAAAT+TGG | + | chr8.3:79741134-79741153 | MS.gene39670:intron | 20.0% |
| !! | CAACTCATAATACTATAAAT+TGG | + | chr8.3:79739027-79739046 | MS.gene39670:intron | 20.0% |
| !! | CTATACTATTCAAATGAAAA+AGG | + | chr8.3:79741488-79741507 | MS.gene39670:intron | 20.0% |
| !! | GTGTATAATTTGAATTTGAA+TGG | + | chr8.3:79737511-79737530 | MS.gene39670:intron | 20.0% |
| !! | TAATCCAATAAGAGTTTATT+GGG | + | chr8.3:79740111-79740130 | MS.gene39670:intron | 20.0% |
| !! | TTAATCCAATAAGAGTTTAT+TGG | + | chr8.3:79740110-79740129 | MS.gene39670:intron | 20.0% |
| !! | TTATAAGCTATAAGCTTAAA+GGG | + | chr8.3:79737219-79737238 | MS.gene39670:intron | 20.0% |
| !! | TTATGGTTCATAATAAATTC+AGG | + | chr8.3:79740673-79740692 | MS.gene39670:intron | 20.0% |
| !! | TTTATTCAAGAAATGAGAAT+TGG | - | chr8.3:79737648-79737667 | None:intergenic | 20.0% |
| !! | TTTCAATTTCTTACTTTGAT+GGG | + | chr8.3:79737364-79737383 | MS.gene39670:intron | 20.0% |
| !!! | AAGTTTTTTAAGAGTTTGTT+AGG | + | chr8.3:79740203-79740222 | MS.gene39670:intron | 20.0% |
| !!! | AGATTTAATGCCAAAATTTT+TGG | + | chr8.3:79740784-79740803 | MS.gene39670:CDS | 20.0% |
| !!! | GTAACTGTAAAGAATTTTTA+CGG | + | chr8.3:79741320-79741339 | MS.gene39670:intron | 20.0% |
| !!! | GTTTCTTATTTCACTATATT+AGG | + | chr8.3:79738462-79738481 | MS.gene39670:intron | 20.0% |
| !!! | TAGATTTTGCTTAATTTTCA+GGG | - | chr8.3:79740453-79740472 | None:intergenic | 20.0% |
| !!! | TATGTTTTGATCATTAGTTT+CGG | + | chr8.3:79737802-79737821 | MS.gene39670:intron | 20.0% |
| !!! | TCTTTTTCATTTTTATGGTT+CGG | + | chr8.3:79739594-79739613 | MS.gene39670:intron | 20.0% |
| !!! | TCTTTTTTTGCTAGAATTAT+AGG | + | chr8.3:79739689-79739708 | MS.gene39670:intron | 20.0% |
| !!! | TGTTATGCTTCTTTAAAAAT+TGG | + | chr8.3:79737287-79737306 | MS.gene39670:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAAAA+TGG | - | chr8.3:79741053-79741072 | None:intergenic | 20.0% |
| !!! | TTATTTTTCATTATCTGATG+TGG | + | chr8.3:79738893-79738912 | MS.gene39670:intron | 20.0% |
| ! | AAAAAATGTTCCTAAAACTC+AGG | - | chr8.3:79740143-79740162 | None:intergenic | 25.0% |
| ! | AAAAATGTTCCTAAAACTCA+GGG | - | chr8.3:79740142-79740161 | None:intergenic | 25.0% |
| ! | AAATATGAAAATCACTCTGA+TGG | + | chr8.3:79739886-79739905 | MS.gene39670:intron | 25.0% |
| ! | AAATCAACACAATAAATCTC+AGG | - | chr8.3:79739957-79739976 | None:intergenic | 25.0% |
| ! | AAGAGTTTGTATGAAAATCA+AGG | - | chr8.3:79740577-79740596 | None:intergenic | 25.0% |
| ! | AATATGAAAATCACTCTGAT+GGG | + | chr8.3:79739887-79739906 | MS.gene39670:intron | 25.0% |
| ! | AATCTAGACATGCTAATAAT+AGG | + | chr8.3:79740467-79740486 | MS.gene39670:intron | 25.0% |
| ! | AATTAATCAACATTTCACTG+CGG | - | chr8.3:79741530-79741549 | None:intergenic | 25.0% |
| ! | ACATTGTCTCATATTATTAC+TGG | + | chr8.3:79738302-79738321 | MS.gene39670:intron | 25.0% |
| ! | ACCATAAAAATGAAAAAGAG+TGG | - | chr8.3:79739593-79739612 | None:intergenic | 25.0% |
| ! | ACTTATGGAATCAATATGAA+TGG | + | chr8.3:79740514-79740533 | MS.gene39670:intron | 25.0% |
| ! | AGAGTTTGTATGAAAATCAA+GGG | - | chr8.3:79740576-79740595 | None:intergenic | 25.0% |
| ! | AGATATCGTACTTCATATAT+TGG | + | chr8.3:79738147-79738166 | MS.gene39670:intron | 25.0% |
| ! | ATAGGATTAGGTAAAGAAAA+AGG | + | chr8.3:79739707-79739726 | MS.gene39670:intron | 25.0% |
| ! | ATAGTTAATAAGCTAGGTTA+TGG | + | chr8.3:79736940-79736959 | MS.gene39670:intron | 25.0% |
| ! | CTGATTGAATTTGTAATGTT+TGG | + | chr8.3:79737021-79737040 | MS.gene39670:intron | 25.0% |
| ! | CTTATAAGCTATAAGCTTAA+AGG | + | chr8.3:79737218-79737237 | MS.gene39670:intron | 25.0% |
| ! | GAATAAAAAATAGGAGTTGT+TGG | + | chr8.3:79737661-79737680 | MS.gene39670:intron | 25.0% |
| ! | GATAGAACTAGTAAATTCAA+AGG | - | chr8.3:79740365-79740384 | None:intergenic | 25.0% |
| ! | GTTTCAATTTCTTACTTTGA+TGG | + | chr8.3:79737363-79737382 | MS.gene39670:intron | 25.0% |
| ! | TAACTTAATCTTTCAACAAC+AGG | + | chr8.3:79740981-79741000 | MS.gene39670:CDS | 25.0% |
| ! | TAAGCTCATATGACAAAAAA+AGG | - | chr8.3:79737202-79737221 | None:intergenic | 25.0% |
| ! | TACTATTCAAATGAAAAAGG+AGG | + | chr8.3:79741491-79741510 | MS.gene39670:intron | 25.0% |
| ! | TCATTATGTTACAAACTACT+TGG | + | chr8.3:79740425-79740444 | MS.gene39670:intron | 25.0% |
| ! | TTATGGATAGTTAATAAGCT+AGG | + | chr8.3:79736934-79736953 | MS.gene39670:intron | 25.0% |
| ! | TTCAATTTCTTACTTTGATG+GGG | + | chr8.3:79737365-79737384 | MS.gene39670:intron | 25.0% |
| ! | TTGATTAAGGATTAAAAGTC+CGG | - | chr8.3:79739839-79739858 | None:intergenic | 25.0% |
| ! | TTTGCTAGAATTATAGGATT+AGG | + | chr8.3:79739695-79739714 | MS.gene39670:intron | 25.0% |
| !! | AATCAATATGAATGGATTCA+AGG | + | chr8.3:79740522-79740541 | MS.gene39670:intron | 25.0% |
| !! | AATCTTGTTTATGATCTTCA+TGG | + | chr8.3:79741438-79741457 | MS.gene39670:intron | 25.0% |
| !! | ATATCAACTATCATTTTCCT+AGG | - | chr8.3:79738651-79738670 | None:intergenic | 25.0% |
| !! | CTAGATTTTGCTTAATTTTC+AGG | - | chr8.3:79740454-79740473 | None:intergenic | 25.0% |
| !! | TATCCTTTTTATCATAGTAC+CGG | + | chr8.3:79739817-79739836 | MS.gene39670:intron | 25.0% |
| !! | TATGTTGATAGAAAAGAAGA+GGG | + | chr8.3:79737565-79737584 | MS.gene39670:intron | 25.0% |
| !! | TTATGTTGATAGAAAAGAAG+AGG | + | chr8.3:79737564-79737583 | MS.gene39670:intron | 25.0% |
| !! | TTTAATTTACTTGAGCATGA+TGG | + | chr8.3:79736869-79736888 | MS.gene39670:intron | 25.0% |
| !! | TTTTCGAAATGTCTAATTGT+AGG | + | chr8.3:79741646-79741665 | MS.gene39670:intron | 25.0% |
| !!! | ACAAGTCACTTTTTTCATAT+GGG | + | chr8.3:79738742-79738761 | MS.gene39670:CDS | 25.0% |
| !!! | ACCACTCTTTTTCATTTTTA+TGG | + | chr8.3:79739589-79739608 | MS.gene39670:intron | 25.0% |
| !!! | ACTTTTTTCAAGTAAGATGA+CGG | + | chr8.3:79737113-79737132 | MS.gene39670:intron | 25.0% |
| !!! | ATGATGTTTGATTTTGTTGT+TGG | + | chr8.3:79737472-79737491 | MS.gene39670:intron | 25.0% |
| !!! | ATTGGATTATTTTTTTTGGG+TGG | + | chr8.3:79737305-79737324 | MS.gene39670:intron | 25.0% |
| !!! | TCAACATTTTGAGAGTATAA+AGG | - | chr8.3:79738940-79738959 | None:intergenic | 25.0% |
| !!! | TGTTTAGCTTTTCATTCATT+TGG | - | chr8.3:79737539-79737558 | None:intergenic | 25.0% |
| !!! | TTGGATTATTTTTTTTGGGT+GGG | + | chr8.3:79737306-79737325 | MS.gene39670:intron | 25.0% |
| !!! | TTTACTAGTTCTATCAAACT+CGG | + | chr8.3:79740370-79740389 | MS.gene39670:intron | 25.0% |
| AAAATGTTCCTAAAACTCAG+GGG | - | chr8.3:79740141-79740160 | None:intergenic | 30.0% | |
| AAAGATAGTTGCTCTTATCA+AGG | - | chr8.3:79741017-79741036 | None:intergenic | 30.0% | |
| AAATCAACTGATATAGACTC+GGG | - | chr8.3:79739240-79739259 | None:intergenic | 30.0% | |
| AACTATCTTTAGGTGTCTTT+AGG | + | chr8.3:79741027-79741046 | MS.gene39670:intron | 30.0% | |
| AAGATTCACAAAGAAGTTTG+GGG | + | chr8.3:79740834-79740853 | MS.gene39670:CDS | 30.0% | |
| AGCTTAATTATGGTCGATAT+AGG | + | chr8.3:79738598-79738617 | MS.gene39670:intron | 30.0% | |
| AGTATAAAGGAAGTCTATCA+TGG | - | chr8.3:79738927-79738946 | None:intergenic | 30.0% | |
| ATCATGACTGAAACAATCAT+TGG | - | chr8.3:79740059-79740078 | None:intergenic | 30.0% | |
| ATGTCCCAATAAACTCTTAT+TGG | - | chr8.3:79740118-79740137 | None:intergenic | 30.0% | |
| ATTCACCAAAAAGGAATGAA+GGG | + | chr8.3:79741825-79741844 | MS.gene39670:CDS | 30.0% | |
| ATTCTTTGAACAGGAAACAT+GGG | + | chr8.3:79741714-79741733 | MS.gene39670:CDS | 30.0% | |
| CAAAGAATCAATCGAAATTC+TGG | - | chr8.3:79741702-79741721 | None:intergenic | 30.0% | |
| CAAAGGTAACACTGTATTAT+TGG | - | chr8.3:79740348-79740367 | None:intergenic | 30.0% | |
| CAAATCAACTGATATAGACT+CGG | - | chr8.3:79739241-79739260 | None:intergenic | 30.0% | |
| CATTAGTATGTTTGTGTACT+CGG | + | chr8.3:79739564-79739583 | MS.gene39670:intron | 30.0% | |
| CTATAAATTGGATCATGCAA+TGG | + | chr8.3:79739039-79739058 | MS.gene39670:intron | 30.0% | |
| CTATGTTTGGCAAGAAATTA+TGG | + | chr8.3:79736917-79736936 | MS.gene39670:intron | 30.0% | |
| GAAAAAGGAGAACATAGTTA+AGG | + | chr8.3:79739722-79739741 | MS.gene39670:intron | 30.0% | |
| GAAAATGATGAGTGATATGA+GGG | - | chr8.3:79736580-79736599 | None:intergenic | 30.0% | |
| GAAGATTCACAAAGAAGTTT+GGG | + | chr8.3:79740833-79740852 | MS.gene39670:CDS | 30.0% | |
| GAGTTTGTATGAAAATCAAG+GGG | - | chr8.3:79740575-79740594 | None:intergenic | 30.0% | |
| GTTGAAAGATTAAGTTAAGC+CGG | - | chr8.3:79740978-79740997 | None:intergenic | 30.0% | |
| TAGACAATTTAGGCTATGTT+TGG | + | chr8.3:79736904-79736923 | MS.gene39670:intron | 30.0% | |
| TATTCACCAAAAAGGAATGA+AGG | + | chr8.3:79741824-79741843 | MS.gene39670:CDS | 30.0% | |
| TCAATTTCTTACTTTGATGG+GGG | + | chr8.3:79737366-79737385 | MS.gene39670:intron | 30.0% | |
| TCATTTCTGAATCATAGCTA+TGG | - | chr8.3:79741606-79741625 | None:intergenic | 30.0% | |
| TCATTTGAATAGTATAGCCA+AGG | - | chr8.3:79741485-79741504 | None:intergenic | 30.0% | |
| TGATAAGAGCAACTATCTTT+AGG | + | chr8.3:79741017-79741036 | MS.gene39670:intron | 30.0% | |
| TTAATTATGGTCGATATAGG+TGG | + | chr8.3:79738601-79738620 | MS.gene39670:intron | 30.0% | |
| TTCAAATGAAAAAGGAGGAA+CGG | + | chr8.3:79741496-79741515 | MS.gene39670:intron | 30.0% | |
| TTGAAAGATTAAGTTAAGCC+GGG | - | chr8.3:79740977-79740996 | None:intergenic | 30.0% | |
| ! | ATTATGAGTACGTTGATAAG+TGG | - | chr8.3:79738506-79738525 | None:intergenic | 30.0% |
| ! | GCAAACTGAACCAAAAATTT+TGG | - | chr8.3:79740797-79740816 | None:intergenic | 30.0% |
| ! | GTAAAGAATTTTTACGGAGT+AGG | + | chr8.3:79741326-79741345 | MS.gene39670:intron | 30.0% |
| ! | TTTCGATTGATTCTTTGAAC+AGG | + | chr8.3:79741705-79741724 | MS.gene39670:CDS | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr8.3:79738094-79738113 | MS.gene39670:intron | 30.0% |
| !! | CATATTGATTCCATAAGTGA+GGG | - | chr8.3:79740512-79740531 | None:intergenic | 30.0% |
| !! | TCATATTGATTCCATAAGTG+AGG | - | chr8.3:79740513-79740532 | None:intergenic | 30.0% |
| !!! | ACAAACTCTTTTTTCGTCAT+CGG | + | chr8.3:79740587-79740606 | MS.gene39670:intron | 30.0% |
| !!! | ATGTTTGATTTTGTTGTTGG+TGG | + | chr8.3:79737475-79737494 | MS.gene39670:intron | 30.0% |
| !!! | ATTTTTTTGGTCTTAACCTC+TGG | + | chr8.3:79739973-79739992 | MS.gene39670:intron | 30.0% |
| !!! | CAAAAAAGTGGTGTTTTTTC+AGG | + | chr8.3:79738845-79738864 | MS.gene39670:CDS | 30.0% |
| !!! | CTTTTTTCAAGTAAGATGAC+GGG | + | chr8.3:79737114-79737133 | MS.gene39670:intron | 30.0% |
| !!! | GAAAAAACACCACTTTTTTG+CGG | - | chr8.3:79738845-79738864 | None:intergenic | 30.0% |
| !!! | GACAAGTCACTTTTTTCATA+TGG | + | chr8.3:79738741-79738760 | MS.gene39670:CDS | 30.0% |
| !!! | TGGATTATTTTTTTTGGGTG+GGG | + | chr8.3:79737307-79737326 | MS.gene39670:intron | 30.0% |
| !!! | TGTTTGATTTTGTTGTTGGT+GGG | + | chr8.3:79737476-79737495 | MS.gene39670:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr8.3:79738093-79738112 | None:intergenic | 30.0% |
| AATGTCTAATTGTAGGTTGC+AGG | + | chr8.3:79741653-79741672 | MS.gene39670:intron | 35.0% | |
| AATTGGATCATGCAATGGTT+TGG | + | chr8.3:79739044-79739063 | MS.gene39670:intron | 35.0% | |
| AGTCCGGTACTATGATAAAA+AGG | - | chr8.3:79739823-79739842 | None:intergenic | 35.0% | |
| AGTCTGGAAAAATTGTTGCT+TGG | + | chr8.3:79741801-79741820 | MS.gene39670:CDS | 35.0% | |
| ATGATAAGATCAAGTACCTC+TGG | + | chr8.3:79739403-79739422 | MS.gene39670:CDS | 35.0% | |
| ATTCAATCTCTCCACAGTTA+AGG | + | chr8.3:79738698-79738717 | MS.gene39670:CDS | 35.0% | |
| CGAGTACACAAACATACTAA+TGG | - | chr8.3:79739566-79739585 | None:intergenic | 35.0% | |
| CGAGTCTATATCAGTTGATT+TGG | + | chr8.3:79739239-79739258 | MS.gene39670:CDS | 35.0% | |
| CTAGATATATCTTCAGCTTC+CGG | + | chr8.3:79740880-79740899 | MS.gene39670:CDS | 35.0% | |
| CTATTGAATGGCTTAAATGG+GGG | + | chr8.3:79737331-79737350 | MS.gene39670:intron | 35.0% | |
| CTTGCGAAGAAAATTCTGAA+TGG | + | chr8.3:79740904-79740923 | MS.gene39670:CDS | 35.0% | |
| GAGAAGTGACTGAAATGAAA+AGG | - | chr8.3:79736654-79736673 | None:intergenic | 35.0% | |
| GAGTTTATGGGAACAACTTA+TGG | - | chr8.3:79741215-79741234 | None:intergenic | 35.0% | |
| GATTCTTTGAACAGGAAACA+TGG | + | chr8.3:79741713-79741732 | MS.gene39670:CDS | 35.0% | |
| GCACTCATACAGCTTAATTA+TGG | + | chr8.3:79738588-79738607 | MS.gene39670:intron | 35.0% | |
| GCTATTGAATGGCTTAAATG+GGG | + | chr8.3:79737330-79737349 | MS.gene39670:intron | 35.0% | |
| GCTGCAAATGAAATCTTCAA+TGG | - | chr8.3:79741744-79741763 | None:intergenic | 35.0% | |
| GGAAAATGATGAGTGATATG+AGG | - | chr8.3:79736581-79736600 | None:intergenic | 35.0% | |
| GGAAGATTCACAAAGAAGTT+TGG | + | chr8.3:79740832-79740851 | MS.gene39670:CDS | 35.0% | |
| GGCTATTGAATGGCTTAAAT+GGG | + | chr8.3:79737329-79737348 | MS.gene39670:intron | 35.0% | |
| GTAACACTGTATTATTGGAC+TGG | - | chr8.3:79740343-79740362 | None:intergenic | 35.0% | |
| GTCATGATTCAAACTCTGAT+AGG | + | chr8.3:79740071-79740090 | MS.gene39670:intron | 35.0% | |
| TAAGCTATAAGCTTAAAGGG+TGG | + | chr8.3:79737222-79737241 | MS.gene39670:intron | 35.0% | |
| TATTGAATGGCTTAAATGGG+GGG | + | chr8.3:79737332-79737351 | MS.gene39670:intron | 35.0% | |
| TCCAATATACATGTTCGTGT+CGG | + | chr8.3:79737702-79737721 | MS.gene39670:intron | 35.0% | |
| TCCAATATCTGTGTTTGTGT+CGG | + | chr8.3:79738345-79738364 | MS.gene39670:intron | 35.0% | |
| TGAAAGATTAAGTTAAGCCG+GGG | - | chr8.3:79740976-79740995 | None:intergenic | 35.0% | |
| TGATCTAGAAGCTCTTACAA+TGG | - | chr8.3:79740313-79740332 | None:intergenic | 35.0% | |
| TGTTTGGTAAAATTAGCCGT+TGG | + | chr8.3:79737037-79737056 | MS.gene39670:intron | 35.0% | |
| TTGCTTGGTATTCACCAAAA+AGG | + | chr8.3:79741816-79741835 | MS.gene39670:CDS | 35.0% | |
| TTTCTGAATCATAGCTATGG+TGG | - | chr8.3:79741603-79741622 | None:intergenic | 35.0% | |
| TTTGTGGTCAACAAACAACT+GGG | - | chr8.3:79739199-79739218 | None:intergenic | 35.0% | |
| ! | AATTTTTACGGAGTAGGAAG+AGG | + | chr8.3:79741332-79741351 | MS.gene39670:intron | 35.0% |
| ! | AGAGAAATTTTCTCTGGTCT+AGG | + | chr8.3:79740226-79740245 | MS.gene39670:intron | 35.0% |
| ! | ATAAACATTCGTGACTGGTT+GGG | - | chr8.3:79741239-79741258 | None:intergenic | 35.0% |
| ! | ATAAGCTAGCTTGTAGCTTA+TGG | + | chr8.3:79736987-79737006 | MS.gene39670:intron | 35.0% |
| ! | ATCACTCATCATTTTCCCTT+TGG | + | chr8.3:79736584-79736603 | MS.gene39670:CDS | 35.0% |
| ! | ATGCCTTTAATCTGAAGTGT+CGG | - | chr8.3:79738211-79738230 | None:intergenic | 35.0% |
| ! | CAACTATCATTTTCCTAGGA+CGG | - | chr8.3:79738647-79738666 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr8.3:79737963-79737982 | None:intergenic | 35.0% |
| ! | GTTAGGAGAGAAATTTTCTC+TGG | + | chr8.3:79740220-79740239 | MS.gene39670:intron | 35.0% |
| ! | TAAGCTAGCTTGTAGCTTAT+GGG | + | chr8.3:79736988-79737007 | MS.gene39670:intron | 35.0% |
| ! | TCTGTTTTCATAAGCTACCT+TGG | + | chr8.3:79741173-79741192 | MS.gene39670:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr8.3:79737959-79737978 | None:intergenic | 35.0% |
| ! | TTTGGGATGCATAAGAACAA+CGG | + | chr8.3:79739297-79739316 | MS.gene39670:CDS | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr8.3:79737859-79737878 | None:intergenic | 35.0% |
| !! | AGCCATTGATTCATCATTCT+GGG | + | chr8.3:79736442-79736461 | MS.gene39670:CDS | 35.0% |
| !! | ATCTGTGTTGTTTGGTTTAG+AGG | + | chr8.3:79738797-79738816 | MS.gene39670:CDS | 35.0% |
| !! | GGAGTTGTTGGTTATTTTCA+AGG | + | chr8.3:79737673-79737692 | MS.gene39670:intron | 35.0% |
| !! | TCTGTGTTGTTTGGTTTAGA+GGG | + | chr8.3:79738798-79738817 | MS.gene39670:CDS | 35.0% |
| !!! | AAAAGTGGTGTTTTTTCAGG+AGG | + | chr8.3:79738848-79738867 | MS.gene39670:CDS | 35.0% |
| !!! | AGGGTGGTTTTTGTTTTTTG+TGG | + | chr8.3:79737238-79737257 | MS.gene39670:intron | 35.0% |
| !!! | GGATTATTTTTTTTGGGTGG+GGG | + | chr8.3:79737308-79737327 | MS.gene39670:intron | 35.0% |
| !!! | GGGTGGTTTTTGTTTTTTGT+GGG | + | chr8.3:79737239-79737258 | MS.gene39670:intron | 35.0% |
| !!! | GTTTGATTTTGTTGTTGGTG+GGG | + | chr8.3:79737477-79737496 | MS.gene39670:intron | 35.0% |
| AAAGGAACCATACTCCTTCT+TGG | - | chr8.3:79736636-79736655 | None:intergenic | 40.0% | |
| AACCATGATTGTAGACACCT+TGG | + | chr8.3:79741465-79741484 | MS.gene39670:intron | 40.0% | |
| AACGATGACCAGTGAAATCA+AGG | - | chr8.3:79736676-79736695 | None:intergenic | 40.0% | |
| AAGGAACCATACTCCTTCTT+GGG | - | chr8.3:79736635-79736654 | None:intergenic | 40.0% | |
| ACCAAAAAGGAATGAAGGGA+TGG | + | chr8.3:79741829-79741848 | MS.gene39670:CDS | 40.0% | |
| ACCGACACAAACACAGATAT+TGG | - | chr8.3:79738349-79738368 | None:intergenic | 40.0% | |
| ACCGACACGAACATGTATAT+TGG | - | chr8.3:79737706-79737725 | None:intergenic | 40.0% | |
| AGGAGATAAAGCAAACTGTG+AGG | - | chr8.3:79738772-79738791 | None:intergenic | 40.0% | |
| CATAAACATTCGTGACTGGT+TGG | - | chr8.3:79741240-79741259 | None:intergenic | 40.0% | |
| CCAAACAACACAGATGTTGA+AGG | - | chr8.3:79738792-79738811 | None:intergenic | 40.0% | |
| CTGAAATTGGCATTGTGTTC+CGG | + | chr8.3:79741557-79741576 | MS.gene39670:intron | 40.0% | |
| CTTTGTGGTCAACAAACAAC+TGG | - | chr8.3:79739200-79739219 | None:intergenic | 40.0% | |
| GAATCTGCTCGAAATACAAC+TGG | - | chr8.3:79741680-79741699 | None:intergenic | 40.0% | |
| GGGCTATTGAATGGCTTAAA+TGG | + | chr8.3:79737328-79737347 | MS.gene39670:intron | 40.0% | |
| GTCCCAGAATGATGAATCAA+TGG | - | chr8.3:79736447-79736466 | None:intergenic | 40.0% | |
| GTTACAAACTCCCTCACTTA+TGG | + | chr8.3:79740499-79740518 | MS.gene39670:intron | 40.0% | |
| TCACTTCTCCTTGATTTCAC+TGG | + | chr8.3:79736665-79736684 | MS.gene39670:CDS | 40.0% | |
| TCAGCATAAACATTCGTGAC+TGG | - | chr8.3:79741244-79741263 | None:intergenic | 40.0% | |
| TGACCACAAAGGAAGATACT+GGG | + | chr8.3:79739209-79739228 | MS.gene39670:CDS | 40.0% | |
| TGATATGAGGGAGTTGTTGA+TGG | - | chr8.3:79736568-79736587 | None:intergenic | 40.0% | |
| TGTTAGCTCGCTAGACATTA+CGG | + | chr8.3:79740622-79740641 | MS.gene39670:intron | 40.0% | |
| TGTTCTTATGCATCCCAAAG+CGG | - | chr8.3:79739296-79739315 | None:intergenic | 40.0% | |
| TTATTACTGGTGCCTTGTGT+TGG | + | chr8.3:79738315-79738334 | MS.gene39670:intron | 40.0% | |
| TTCACAAAACCTCGATGGTT+GGG | + | chr8.3:79736481-79736500 | MS.gene39670:CDS | 40.0% | |
| TTCTGATCACGATCTTACAG+TGG | + | chr8.3:79739161-79739180 | MS.gene39670:CDS | 40.0% | |
| TTGACCACAAAGGAAGATAC+TGG | + | chr8.3:79739208-79739227 | MS.gene39670:CDS | 40.0% | |
| TTGATTTCACTGGTCATCGT+TGG | + | chr8.3:79736675-79736694 | MS.gene39670:CDS | 40.0% | |
| TTGTGGTCAACAAACAACTG+GGG | - | chr8.3:79739198-79739217 | None:intergenic | 40.0% | |
| TTTCGTCATCGGTGAATTGA+TGG | + | chr8.3:79740598-79740617 | MS.gene39670:intron | 40.0% | |
| TTTCTTCTCTTTGACACAGC+TGG | - | chr8.3:79740757-79740776 | None:intergenic | 40.0% | |
| ! | AAGCTAGCTTGTAGCTTATG+GGG | + | chr8.3:79736989-79737008 | MS.gene39670:intron | 40.0% |
| ! | ACCATCCCTTCATTCCTTTT+TGG | - | chr8.3:79741833-79741852 | None:intergenic | 40.0% |
| ! | CAGAATTTTCTTCGCAAGTC+CGG | - | chr8.3:79740902-79740921 | None:intergenic | 40.0% |
| ! | CAGTTGTTTGTTGACCACAA+AGG | + | chr8.3:79739198-79739217 | MS.gene39670:CDS | 40.0% |
| ! | CCTTCAACATCTGTGTTGTT+TGG | + | chr8.3:79738789-79738808 | MS.gene39670:CDS | 40.0% |
| ! | GCAGCAGTATCTGGAATTAT+TGG | + | chr8.3:79739495-79739514 | MS.gene39670:CDS | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr8.3:79737960-79737979 | None:intergenic | 40.0% |
| ! | TAAACATTCGTGACTGGTTG+GGG | - | chr8.3:79741238-79741257 | None:intergenic | 40.0% |
| ! | TTTGAAACGGAGGGAGTATA+AGG | + | chr8.3:79738107-79738126 | MS.gene39670:intron | 40.0% |
| !! | AGATGACGGGTAAAATTGAG+AGG | + | chr8.3:79737127-79737146 | MS.gene39670:intron | 40.0% |
| !! | AGGTGTCTTTAGGCCATTTT+TGG | + | chr8.3:79741037-79741056 | MS.gene39670:intron | 40.0% |
| !! | CAGCCATTGATTCATCATTC+TGG | + | chr8.3:79736441-79736460 | MS.gene39670:CDS | 40.0% |
| !! | GTTTGCTATACTTTGCAGCA+AGG | + | chr8.3:79740811-79740830 | MS.gene39670:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.3:79738098-79738117 | MS.gene39670:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.3:79738117-79738098 | None:intergenic | 40.0% |
| AAGCCTAGTGAGTGAGTCAT+TGG | + | chr8.3:79740178-79740197 | MS.gene39670:intron | 45.0% | |
| AAGCTACCTTGGAGAGCTTA+TGG | + | chr8.3:79741184-79741203 | MS.gene39670:intron | 45.0% | |
| AGAAGTTTGGGGACTTAACC+CGG | + | chr8.3:79740845-79740864 | MS.gene39670:CDS | 45.0% | |
| AGCCTAGTGAGTGAGTCATT+GGG | + | chr8.3:79740179-79740198 | MS.gene39670:intron | 45.0% | |
| ATCATAAGTAACAGCCGCCT+TGG | - | chr8.3:79739388-79739407 | None:intergenic | 45.0% | |
| ATTCCAGATACTGCTGCATG+AGG | - | chr8.3:79739492-79739511 | None:intergenic | 45.0% | |
| ATTGGCATTGTGTTCCGGAT+CGG | + | chr8.3:79741562-79741581 | MS.gene39670:intron | 45.0% | |
| CATCCCAGTATCTTCCTTTG+TGG | - | chr8.3:79739215-79739234 | None:intergenic | 45.0% | |
| CTAAACATGTGATGCCGTGT+TGG | - | chr8.3:79738266-79738285 | None:intergenic | 45.0% | |
| CTTCACAAAACCTCGATGGT+TGG | + | chr8.3:79736480-79736499 | MS.gene39670:CDS | 45.0% | |
| CTTTGCAACGTCCTTAACTG+TGG | - | chr8.3:79738712-79738731 | None:intergenic | 45.0% | |
| GAGGAAGGGATAATGCCAAA+GGG | - | chr8.3:79736602-79736621 | None:intergenic | 45.0% | |
| GATCCTCTCCCGAATCAATA+AGG | - | chr8.3:79740735-79740754 | None:intergenic | 45.0% | |
| GGATCTGGTAATCCGGAATT+CGG | + | chr8.3:79740011-79740030 | MS.gene39670:intron | 45.0% | |
| GTTAGGAGTTCGTAGAACTC+TGG | + | chr8.3:79740261-79740280 | MS.gene39670:intron | 45.0% | |
| TAAGAACAACGGTAGTCCTC+AGG | + | chr8.3:79739308-79739327 | MS.gene39670:CDS | 45.0% | |
| TATCTAGACGAGCATCTACC+CGG | - | chr8.3:79740867-79740886 | None:intergenic | 45.0% | |
| TCAAACTCTGATAGGACCCT+GGG | + | chr8.3:79740079-79740098 | MS.gene39670:intron | 45.0% | |
| TCAGTTGCATTAGTAGCCTG+AGG | - | chr8.3:79739327-79739346 | None:intergenic | 45.0% | |
| TCCACATTACCACGGACTTA+TGG | + | chr8.3:79739464-79739483 | MS.gene39670:CDS | 45.0% | |
| TCCTCTTCACAAAACCTCGA+TGG | + | chr8.3:79736476-79736495 | MS.gene39670:CDS | 45.0% | |
| TGAGGAAGGGATAATGCCAA+AGG | - | chr8.3:79736603-79736622 | None:intergenic | 45.0% | |
| TGATCACGATCTTACAGTGG+AGG | + | chr8.3:79739164-79739183 | MS.gene39670:CDS | 45.0% | |
| TTCAAACTCTGATAGGACCC+TGG | + | chr8.3:79740078-79740097 | MS.gene39670:intron | 45.0% | |
| TTCCCAATGACTCACTCACT+AGG | - | chr8.3:79740184-79740203 | None:intergenic | 45.0% | |
| TTGGACACAACACCAACACA+AGG | - | chr8.3:79738330-79738349 | None:intergenic | 45.0% | |
| TTTCGTGTCTGACACCAACA+CGG | + | chr8.3:79738249-79738268 | MS.gene39670:intron | 45.0% | |
| ! | AAACATTCGTGACTGGTTGG+GGG | - | chr8.3:79741237-79741256 | None:intergenic | 45.0% |
| ! | ACCATAAGTCCGTGGTAATG+TGG | - | chr8.3:79739468-79739487 | None:intergenic | 45.0% |
| ! | ACTGAAGCGTCAAGAGGAAT+AGG | - | chr8.3:79736527-79736546 | None:intergenic | 45.0% |
| ! | AGCCAAGGTGTCTACAATCA+TGG | - | chr8.3:79741470-79741489 | None:intergenic | 45.0% |
| ! | CAAGTACCTCTGGAGAAACA+CGG | + | chr8.3:79739413-79739432 | MS.gene39670:CDS | 45.0% |
| ! | CTGAAGCGTCAAGAGGAATA+GGG | - | chr8.3:79736526-79736545 | None:intergenic | 45.0% |
| ! | GCACCGACACTTCAGATTAA+AGG | + | chr8.3:79738205-79738224 | MS.gene39670:intron | 45.0% |
| ! | GGCTTGTTTCCACATTACCA+CGG | + | chr8.3:79739456-79739475 | MS.gene39670:CDS | 45.0% |
| ! | TTGTTTGGTTTAGAGGGCCA+TGG | + | chr8.3:79738804-79738823 | MS.gene39670:CDS | 45.0% |
| !! | ACCATCGAGGTTTTGTGAAG+AGG | - | chr8.3:79736480-79736499 | None:intergenic | 45.0% |
| !! | ACTCCACATCGCTAGCTTTA+GGG | - | chr8.3:79741784-79741803 | None:intergenic | 45.0% |
| !! | AGAAAAGCGCCGCAAAAAAG+TGG | + | chr8.3:79738833-79738852 | MS.gene39670:CDS | 45.0% |
| !! | AGTTGATTTGGCATCCCTTG+CGG | + | chr8.3:79739251-79739270 | MS.gene39670:CDS | 45.0% |
| !! | GAACCTTATTGATTCGGGAG+AGG | + | chr8.3:79740729-79740748 | MS.gene39670:CDS | 45.0% |
| !! | GGCGCTTTTCTTTTTCACCA+TGG | - | chr8.3:79738824-79738843 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8.3:79738097-79738116 | MS.gene39670:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8.3:79738116-79738097 | None:intergenic | 45.0% |
| AAAGCTAGCGATGTGGAGTC+TGG | + | chr8.3:79741785-79741804 | MS.gene39670:CDS | 50.0% | |
| ACGAACTCCTAACCAGAGCT+AGG | - | chr8.3:79740254-79740273 | None:intergenic | 50.0% | |
| AGGGTCACCAGGAACAAACT+TGG | - | chr8.3:79736507-79736526 | None:intergenic | 50.0% | |
| ATCTAGACGAGCATCTACCC+GGG | - | chr8.3:79740866-79740885 | None:intergenic | 50.0% | |
| ATCTTACAGTGGAGGCAGCA+TGG | + | chr8.3:79739172-79739191 | MS.gene39670:CDS | 50.0% | |
| CAACTGGACAATTCCGTCCT+AGG | + | chr8.3:79738631-79738650 | MS.gene39670:CDS | 50.0% | |
| CCAGCTGTGATAAACCGATC+CGG | - | chr8.3:79741579-79741598 | None:intergenic | 50.0% | |
| CCATACTCCTTCTTGGGAGA+AGG | - | chr8.3:79736629-79736648 | None:intergenic | 50.0% | |
| CCTTCTCCCAAGAAGGAGTA+TGG | + | chr8.3:79736626-79736645 | MS.gene39670:CDS | 50.0% | |
| CTGGTAATCCGGAATTCGGA+CGG | + | chr8.3:79740015-79740034 | MS.gene39670:intron | 50.0% | |
| GAAGTTTGGGGACTTAACCC+GGG | + | chr8.3:79740846-79740865 | MS.gene39670:CDS | 50.0% | |
| GAGACTGAGGAGGAATACGA+AGG | + | chr8.3:79739435-79739454 | MS.gene39670:CDS | 50.0% | |
| GATTAAGTTAAGCCGGGGTG+AGG | - | chr8.3:79740971-79740990 | None:intergenic | 50.0% | |
| GCATGTCCATAAGCTCTCCA+AGG | - | chr8.3:79741193-79741212 | None:intergenic | 50.0% | |
| GCTTAAATGGGGGGAAGTAG+GGG | + | chr8.3:79737341-79737360 | MS.gene39670:intron | 50.0% | |
| GGAAAGGGGATCTGGTAATC+CGG | + | chr8.3:79740004-79740023 | MS.gene39670:intron | 50.0% | |
| GGCTTAAATGGGGGGAAGTA+GGG | + | chr8.3:79737340-79737359 | MS.gene39670:intron | 50.0% | |
| GTACCTCATGCAGCAGTATC+TGG | + | chr8.3:79739486-79739505 | MS.gene39670:CDS | 50.0% | |
| GTCTTAACCTCTGGTCCCTA+GGG | + | chr8.3:79739982-79740001 | MS.gene39670:intron | 50.0% | |
| TCAAGAGGAATAGGGTCACC+AGG | - | chr8.3:79736518-79736537 | None:intergenic | 50.0% | |
| TCTGATAGGACCCTGGGTTT+GGG | + | chr8.3:79740085-79740104 | MS.gene39670:intron | 50.0% | |
| TCTTAACCTCTGGTCCCTAG+GGG | + | chr8.3:79739983-79740002 | MS.gene39670:intron | 50.0% | |
| TGACCCTAAAGCTAGCGATG+TGG | + | chr8.3:79741778-79741797 | MS.gene39670:CDS | 50.0% | |
| TGGATTAAGGCCCAAACCCA+GGG | - | chr8.3:79740098-79740117 | None:intergenic | 50.0% | |
| TGGCTTAAATGGGGGGAAGT+AGG | + | chr8.3:79737339-79737358 | MS.gene39670:intron | 50.0% | |
| TGGTAATCCGGAATTCGGAC+GGG | + | chr8.3:79740016-79740035 | MS.gene39670:intron | 50.0% | |
| TTGGATTAAGGCCCAAACCC+AGG | - | chr8.3:79740099-79740118 | None:intergenic | 50.0% | |
| TTTGGGTGGGGGCTATTGAA+TGG | + | chr8.3:79737319-79737338 | MS.gene39670:intron | 50.0% | |
| ! | CATGAGGTACCATAAGTCCG+TGG | - | chr8.3:79739476-79739495 | None:intergenic | 50.0% |
| ! | CTGGAAACTGAAGCGTCAAG+AGG | - | chr8.3:79736533-79736552 | None:intergenic | 50.0% |
| ! | GACTGGTTGGGGGAGTTTAT+GGG | - | chr8.3:79741227-79741246 | None:intergenic | 50.0% |
| ! | GTTCCAAATCCAGGAAGCAC+AGG | - | chr8.3:79740704-79740723 | None:intergenic | 50.0% |
| ! | TATAGGTGGCTTGCAGCAAC+TGG | + | chr8.3:79738615-79738634 | MS.gene39670:intron | 50.0% |
| ! | TGACTGGTTGGGGGAGTTTA+TGG | - | chr8.3:79741228-79741247 | None:intergenic | 50.0% |
| ! | TGGGACATCCCCTGAGTTTT+AGG | + | chr8.3:79740130-79740149 | MS.gene39670:intron | 50.0% |
| !! | GACTCCACATCGCTAGCTTT+AGG | - | chr8.3:79741785-79741804 | None:intergenic | 50.0% |
| !! | TTGATGGCGATAGAGTCTGC+TGG | - | chr8.3:79736552-79736571 | None:intergenic | 50.0% |
| AACCCTGGCAGTAGAGACAG+CGG | - | chr8.3:79739360-79739379 | None:intergenic | 55.0% | |
| ACCAGATCCCCTTTCCCCTA+GGG | - | chr8.3:79740000-79740019 | None:intergenic | 55.0% | |
| ACTGCCAGGGTTATGTGCCA+AGG | + | chr8.3:79739368-79739387 | MS.gene39670:CDS | 55.0% | |
| CAAACTTGGCCCAACCATCG+AGG | - | chr8.3:79736493-79736512 | None:intergenic | 55.0% | |
| CAGTCTCCGTGTTTCTCCAG+AGG | - | chr8.3:79739422-79739441 | None:intergenic | 55.0% | |
| CTCAGCTCCTTCTCCCAAGA+AGG | + | chr8.3:79736619-79736638 | MS.gene39670:CDS | 55.0% | |
| CTCTGATAGGACCCTGGGTT+TGG | + | chr8.3:79740084-79740103 | MS.gene39670:intron | 55.0% | |
| CTGGAGAAACACGGAGACTG+AGG | + | chr8.3:79739422-79739441 | MS.gene39670:CDS | 55.0% | |
| CTTACCTCCCGTCCGAATTC+CGG | - | chr8.3:79740026-79740045 | None:intergenic | 55.0% | |
| CTTCTTGGGAGAAGGAGCTG+AGG | - | chr8.3:79736621-79736640 | None:intergenic | 55.0% | |
| GAGAAACACGGAGACTGAGG+AGG | + | chr8.3:79739425-79739444 | MS.gene39670:CDS | 55.0% | |
| GCTCCTGTGCTTCCTGGATT+TGG | + | chr8.3:79740698-79740717 | MS.gene39670:CDS | 55.0% | |
| GGGGATTGCGATACCGCTTT+GGG | + | chr8.3:79739280-79739299 | MS.gene39670:CDS | 55.0% | |
| GGTCTTAACCTCTGGTCCCT+AGG | + | chr8.3:79739981-79740000 | MS.gene39670:intron | 55.0% | |
| TAATCCGGAATTCGGACGGG+AGG | + | chr8.3:79740019-79740038 | MS.gene39670:intron | 55.0% | |
| TACCAGATCCCCTTTCCCCT+AGG | - | chr8.3:79740001-79740020 | None:intergenic | 55.0% | |
| TGGGAGAAGGAGCTGAGGAA+GGG | - | chr8.3:79736616-79736635 | None:intergenic | 55.0% | |
| TTGGGAGAAGGAGCTGAGGA+AGG | - | chr8.3:79736617-79736636 | None:intergenic | 55.0% | |
| ! | CCGGATCGGTTTATCACAGC+TGG | + | chr8.3:79741576-79741595 | MS.gene39670:intron | 55.0% |
| ! | GGTTGGGCCAAGTTTGTTCC+TGG | + | chr8.3:79736497-79736516 | MS.gene39670:CDS | 55.0% |
| !! | CTAGGAGCCTAGCTCTGGTT+AGG | + | chr8.3:79740244-79740263 | MS.gene39670:intron | 55.0% |
| AACAACCGTCAGCCTCACCC+CGG | + | chr8.3:79740956-79740975 | MS.gene39670:CDS | 60.0% | |
| ACACCGCTGTCTCTACTGCC+AGG | + | chr8.3:79739354-79739373 | MS.gene39670:CDS | 60.0% | |
| ACCTCTGGTCCCTAGGGGAA+AGG | + | chr8.3:79739988-79740007 | MS.gene39670:intron | 60.0% | |
| CACCGCTGTCTCTACTGCCA+GGG | + | chr8.3:79739355-79739374 | MS.gene39670:CDS | 60.0% | |
| CAGGTAGCTCCTGTGCTTCC+TGG | + | chr8.3:79740692-79740711 | MS.gene39670:intron | 60.0% | |
| CCTCTGGTCCCTAGGGGAAA+GGG | + | chr8.3:79739989-79740008 | MS.gene39670:intron | 60.0% | |
| CGGGGATTGCGATACCGCTT+TGG | + | chr8.3:79739279-79739298 | MS.gene39670:CDS | 60.0% | |
| CTCTGGTCCCTAGGGGAAAG+GGG | + | chr8.3:79739990-79740009 | MS.gene39670:intron | 60.0% | |
| CTGGTCTAGGAGCCTAGCTC+TGG | + | chr8.3:79740239-79740258 | MS.gene39670:intron | 60.0% | |
| GCCAGGGTTATGTGCCAAGG+CGG | + | chr8.3:79739371-79739390 | MS.gene39670:CDS | 60.0% | |
| TCCCTAGGGGAAAGGGGATC+TGG | + | chr8.3:79739996-79740015 | MS.gene39670:intron | 60.0% | |
| TTAAGCCGGGGTGAGGCTGA+CGG | - | chr8.3:79740964-79740983 | None:intergenic | 60.0% | |
| CAATCCCCGACGAGCCGCAA+GGG | - | chr8.3:79739268-79739287 | None:intergenic | 65.0% | |
| CCCTTTCCCCTAGGGACCAG+AGG | - | chr8.3:79739992-79740011 | None:intergenic | 65.0% | |
| GCCGCCTTGGCACATAACCC+TGG | - | chr8.3:79739375-79739394 | None:intergenic | 65.0% | |
| TGGCATCCCTTGCGGCTCGT+CGG | + | chr8.3:79739259-79739278 | MS.gene39670:CDS | 65.0% | |
| GCAATCCCCGACGAGCCGCA+AGG | - | chr8.3:79739269-79739288 | None:intergenic | 70.0% | |
| GCATCCCTTGCGGCTCGTCG+GGG | + | chr8.3:79739261-79739280 | MS.gene39670:CDS | 70.0% | |
| GGCATCCCTTGCGGCTCGTC+GGG | + | chr8.3:79739260-79739279 | MS.gene39670:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 79736425 | 79741877 | 79736425 | ID=MS.gene39670 |
| chr8.3 | mRNA | 79736425 | 79741877 | 79736425 | ID=MS.gene39670.t1;Parent=MS.gene39670 |
| chr8.3 | exon | 79736425 | 79736696 | 79736425 | ID=MS.gene39670.t1.exon1;Parent=MS.gene39670.t1 |
| chr8.3 | CDS | 79736425 | 79736696 | 79736425 | ID=cds.MS.gene39670.t1;Parent=MS.gene39670.t1 |
| chr8.3 | exon | 79738620 | 79738869 | 79738620 | ID=MS.gene39670.t1.exon2;Parent=MS.gene39670.t1 |
| chr8.3 | CDS | 79738620 | 79738869 | 79738620 | ID=cds.MS.gene39670.t1;Parent=MS.gene39670.t1 |
| chr8.3 | exon | 79739159 | 79739516 | 79739159 | ID=MS.gene39670.t1.exon3;Parent=MS.gene39670.t1 |
| chr8.3 | CDS | 79739159 | 79739516 | 79739159 | ID=cds.MS.gene39670.t1;Parent=MS.gene39670.t1 |
| chr8.3 | exon | 79740695 | 79741002 | 79740695 | ID=MS.gene39670.t1.exon4;Parent=MS.gene39670.t1 |
| chr8.3 | CDS | 79740695 | 79741002 | 79740695 | ID=cds.MS.gene39670.t1;Parent=MS.gene39670.t1 |
| chr8.3 | exon | 79741668 | 79741877 | 79741668 | ID=MS.gene39670.t1.exon5;Parent=MS.gene39670.t1 |
| chr8.3 | CDS | 79741668 | 79741877 | 79741668 | ID=cds.MS.gene39670.t1;Parent=MS.gene39670.t1 |
| Gene Sequence |
| Protein sequence |
