Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39730.t1 | KEH22715.1 | 96.7 | 600 | 20 | 0 | 1 | 600 | 6 | 605 | 0.00E+00 | 1147.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39730.t1 | F4J7S8 | 54.9 | 597 | 236 | 12 | 5 | 595 | 4 | 573 | 2.3e-169 | 597.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39730.t1 | A0A072UA43 | 96.7 | 600 | 20 | 0 | 1 | 600 | 6 | 605 | 0.0e+00 | 1147.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene68793 | MS.gene39730 | PPI |
MS.gene39730 | MS.gene68200 | PPI |
MS.gene063145 | MS.gene39730 | PPI |
MS.gene003698 | MS.gene39730 | PPI |
MS.gene23312 | MS.gene39730 | PPI |
MS.gene50746 | MS.gene39730 | PPI |
MS.gene39730 | MS.gene014259 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39730.t1 | MTR_7g056587 | 96.667 | 600 | 20 | 0 | 1 | 600 | 6 | 605 | 0.0 | 1208 |
MS.gene39730.t1 | MTR_7g056587 | 96.321 | 598 | 22 | 0 | 3 | 600 | 22 | 619 | 0.0 | 1201 |
MS.gene39730.t1 | MTR_7g056587 | 95.932 | 590 | 22 | 1 | 1 | 590 | 6 | 593 | 0.0 | 1145 |
MS.gene39730.t1 | MTR_7g056587 | 96.068 | 585 | 21 | 1 | 6 | 590 | 3 | 585 | 0.0 | 1137 |
MS.gene39730.t1 | MTR_7g056587 | 96.667 | 480 | 16 | 0 | 121 | 600 | 1 | 480 | 0.0 | 971 |
MS.gene39730.t1 | MTR_3g117100 | 44.032 | 620 | 301 | 14 | 7 | 590 | 14 | 623 | 4.83e-168 | 492 |
MS.gene39730.t1 | MTR_1g022480 | 46.026 | 604 | 295 | 11 | 14 | 589 | 20 | 620 | 6.41e-166 | 487 |
MS.gene39730.t1 | MTR_1g022480 | 45.695 | 604 | 295 | 11 | 14 | 589 | 20 | 618 | 1.54e-165 | 486 |
MS.gene39730.t1 | MTR_1g022480 | 45.172 | 611 | 295 | 12 | 14 | 589 | 20 | 625 | 9.57e-163 | 479 |
MS.gene39730.t1 | MTR_3g112150 | 43.216 | 597 | 296 | 11 | 9 | 590 | 4 | 572 | 1.00e-150 | 446 |
MS.gene39730.t1 | MTR_5g021050 | 52.985 | 402 | 168 | 6 | 36 | 436 | 11 | 392 | 3.63e-148 | 436 |
MS.gene39730.t1 | MTR_5g021050 | 52.985 | 402 | 168 | 6 | 36 | 436 | 11 | 392 | 6.01e-148 | 436 |
MS.gene39730.t1 | MTR_4g070810 | 63.279 | 305 | 111 | 1 | 45 | 348 | 48 | 352 | 1.08e-147 | 440 |
MS.gene39730.t1 | MTR_8g076880 | 44.068 | 531 | 239 | 10 | 66 | 572 | 42 | 538 | 5.90e-143 | 426 |
MS.gene39730.t1 | MTR_4g070720 | 43.031 | 574 | 275 | 12 | 14 | 571 | 12 | 549 | 2.00e-140 | 419 |
MS.gene39730.t1 | MTR_1g022480 | 46.169 | 509 | 244 | 9 | 106 | 589 | 31 | 534 | 1.39e-139 | 416 |
MS.gene39730.t1 | MTR_8g071000 | 43.304 | 575 | 282 | 10 | 41 | 582 | 33 | 596 | 9.67e-139 | 417 |
MS.gene39730.t1 | MTR_3g010190 | 59.942 | 342 | 135 | 2 | 7 | 346 | 5 | 346 | 4.18e-138 | 412 |
MS.gene39730.t1 | MTR_3g117090 | 41.681 | 571 | 275 | 13 | 21 | 571 | 18 | 550 | 1.36e-133 | 402 |
MS.gene39730.t1 | MTR_3g117090 | 58.934 | 319 | 128 | 2 | 21 | 339 | 18 | 333 | 6.36e-129 | 389 |
MS.gene39730.t1 | MTR_4g070790 | 53.558 | 267 | 124 | 0 | 80 | 346 | 61 | 327 | 4.77e-105 | 323 |
MS.gene39730.t1 | MTR_6g015645 | 65.347 | 202 | 70 | 0 | 139 | 340 | 8 | 209 | 6.09e-98 | 306 |
MS.gene39730.t1 | MTR_5g012460 | 44.578 | 332 | 174 | 4 | 16 | 344 | 32 | 356 | 1.03e-96 | 303 |
MS.gene39730.t1 | MTR_4g070780 | 48.551 | 276 | 111 | 4 | 66 | 341 | 26 | 270 | 6.14e-84 | 268 |
MS.gene39730.t1 | MTR_4g070730 | 42.857 | 329 | 142 | 6 | 66 | 393 | 32 | 315 | 2.44e-78 | 253 |
MS.gene39730.t1 | MTR_6g034285 | 51.515 | 99 | 48 | 0 | 139 | 237 | 195 | 293 | 1.10e-25 | 110 |
MS.gene39730.t1 | MTR_3g098530 | 29.699 | 266 | 140 | 10 | 67 | 315 | 29 | 264 | 1.00e-20 | 92.8 |
MS.gene39730.t1 | MTR_2g027140 | 29.439 | 214 | 135 | 5 | 103 | 310 | 38 | 241 | 2.24e-18 | 87.0 |
MS.gene39730.t1 | MTR_3g060670 | 29.461 | 241 | 145 | 6 | 98 | 327 | 26 | 252 | 3.47e-18 | 86.7 |
MS.gene39730.t1 | MTR_8g096170 | 31.048 | 248 | 143 | 11 | 71 | 313 | 21 | 245 | 1.34e-14 | 74.3 |
MS.gene39730.t1 | MTR_8g095360 | 27.650 | 217 | 138 | 6 | 104 | 313 | 182 | 386 | 5.35e-14 | 75.1 |
MS.gene39730.t1 | MTR_2g027140 | 28.061 | 196 | 125 | 5 | 121 | 310 | 1 | 186 | 4.24e-13 | 70.5 |
MS.gene39730.t1 | MTR_4g033435 | 25.877 | 228 | 150 | 6 | 93 | 313 | 262 | 477 | 3.72e-12 | 69.7 |
MS.gene39730.t1 | MTR_4g033435 | 25.243 | 206 | 136 | 5 | 93 | 292 | 262 | 455 | 6.81e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39730.t1 | AT3G24840 | 54.682 | 598 | 239 | 11 | 4 | 595 | 3 | 574 | 0.0 | 630 |
MS.gene39730.t1 | AT3G24840 | 54.682 | 598 | 239 | 11 | 4 | 595 | 3 | 574 | 0.0 | 630 |
MS.gene39730.t1 | AT3G24840 | 54.682 | 598 | 239 | 11 | 4 | 595 | 3 | 574 | 0.0 | 630 |
MS.gene39730.t1 | AT3G24840 | 54.849 | 598 | 237 | 12 | 4 | 595 | 3 | 573 | 0.0 | 628 |
MS.gene39730.t1 | AT3G24840 | 54.849 | 598 | 237 | 12 | 4 | 595 | 3 | 573 | 0.0 | 628 |
MS.gene39730.t1 | AT3G24840 | 54.849 | 598 | 237 | 12 | 4 | 595 | 3 | 573 | 0.0 | 628 |
MS.gene39730.t1 | AT3G24840 | 54.849 | 598 | 237 | 12 | 4 | 595 | 3 | 573 | 0.0 | 628 |
MS.gene39730.t1 | AT4G39170 | 43.590 | 585 | 302 | 9 | 7 | 571 | 14 | 590 | 1.78e-161 | 475 |
MS.gene39730.t1 | AT4G39170 | 43.568 | 583 | 303 | 8 | 7 | 571 | 14 | 588 | 9.47e-161 | 473 |
MS.gene39730.t1 | AT2G21520 | 41.340 | 612 | 318 | 11 | 7 | 583 | 18 | 623 | 6.83e-155 | 459 |
MS.gene39730.t1 | AT2G21520 | 41.340 | 612 | 318 | 11 | 7 | 583 | 18 | 623 | 6.83e-155 | 459 |
MS.gene39730.t1 | AT2G21520 | 41.340 | 612 | 318 | 11 | 7 | 583 | 14 | 619 | 1.15e-154 | 459 |
MS.gene39730.t1 | AT4G36490 | 42.606 | 568 | 268 | 11 | 26 | 576 | 5 | 531 | 7.12e-153 | 451 |
MS.gene39730.t1 | AT2G21540 | 42.984 | 563 | 269 | 10 | 15 | 568 | 10 | 529 | 9.90e-152 | 448 |
MS.gene39730.t1 | AT2G21540 | 42.984 | 563 | 269 | 10 | 15 | 568 | 10 | 529 | 9.90e-152 | 448 |
MS.gene39730.t1 | AT2G21540 | 42.984 | 563 | 269 | 10 | 15 | 568 | 10 | 529 | 9.90e-152 | 448 |
MS.gene39730.t1 | AT2G21540 | 42.984 | 563 | 269 | 10 | 15 | 568 | 10 | 529 | 9.90e-152 | 448 |
MS.gene39730.t1 | AT2G21540 | 42.806 | 563 | 264 | 8 | 15 | 568 | 10 | 523 | 2.87e-150 | 444 |
MS.gene39730.t1 | AT2G21540 | 42.806 | 563 | 264 | 8 | 15 | 568 | 10 | 523 | 2.87e-150 | 444 |
MS.gene39730.t1 | AT2G18180 | 42.424 | 561 | 258 | 12 | 36 | 576 | 19 | 534 | 1.23e-149 | 442 |
MS.gene39730.t1 | AT2G18180 | 42.424 | 561 | 258 | 12 | 36 | 576 | 19 | 534 | 1.58e-149 | 443 |
MS.gene39730.t1 | AT4G39180 | 42.957 | 575 | 282 | 13 | 10 | 576 | 5 | 541 | 2.58e-149 | 442 |
MS.gene39730.t1 | AT4G39180 | 42.957 | 575 | 282 | 13 | 10 | 576 | 5 | 541 | 2.58e-149 | 442 |
MS.gene39730.t1 | AT1G55690 | 44.137 | 614 | 287 | 13 | 16 | 583 | 14 | 617 | 3.32e-149 | 444 |
MS.gene39730.t1 | AT1G55690 | 44.137 | 614 | 287 | 13 | 16 | 583 | 14 | 617 | 3.32e-149 | 444 |
MS.gene39730.t1 | AT1G55690 | 44.137 | 614 | 287 | 13 | 16 | 583 | 14 | 617 | 3.32e-149 | 444 |
MS.gene39730.t1 | AT1G55690 | 44.137 | 614 | 287 | 13 | 16 | 583 | 14 | 617 | 3.32e-149 | 444 |
MS.gene39730.t1 | AT1G55690 | 44.137 | 614 | 287 | 13 | 16 | 583 | 14 | 617 | 3.65e-149 | 444 |
MS.gene39730.t1 | AT4G39180 | 43.304 | 575 | 281 | 14 | 10 | 576 | 5 | 542 | 5.44e-149 | 441 |
MS.gene39730.t1 | AT4G34580 | 41.993 | 562 | 294 | 10 | 21 | 576 | 7 | 542 | 2.90e-141 | 421 |
MS.gene39730.t1 | AT4G34580 | 41.993 | 562 | 294 | 10 | 21 | 576 | 7 | 542 | 2.90e-141 | 421 |
MS.gene39730.t1 | AT5G56160 | 42.288 | 577 | 302 | 12 | 23 | 585 | 15 | 574 | 3.11e-140 | 419 |
MS.gene39730.t1 | AT5G56160 | 42.288 | 577 | 302 | 12 | 23 | 585 | 15 | 574 | 3.11e-140 | 419 |
MS.gene39730.t1 | AT1G75370 | 40.902 | 621 | 308 | 12 | 7 | 590 | 14 | 612 | 6.21e-139 | 417 |
MS.gene39730.t1 | AT1G75370 | 41.205 | 614 | 301 | 12 | 7 | 583 | 14 | 604 | 1.23e-136 | 413 |
MS.gene39730.t1 | AT1G19650 | 39.052 | 612 | 317 | 11 | 14 | 590 | 18 | 608 | 1.69e-135 | 409 |
MS.gene39730.t1 | AT2G18180 | 42.455 | 497 | 226 | 9 | 100 | 576 | 7 | 463 | 6.54e-135 | 402 |
MS.gene39730.t1 | AT2G18180 | 42.455 | 497 | 226 | 9 | 100 | 576 | 7 | 463 | 1.02e-134 | 402 |
MS.gene39730.t1 | AT2G16380 | 40.360 | 555 | 302 | 8 | 23 | 576 | 9 | 535 | 2.74e-129 | 390 |
MS.gene39730.t1 | AT2G16380 | 40.360 | 555 | 302 | 8 | 23 | 576 | 9 | 535 | 2.74e-129 | 390 |
MS.gene39730.t1 | AT1G19650 | 55.828 | 326 | 141 | 3 | 14 | 339 | 18 | 340 | 2.31e-128 | 384 |
MS.gene39730.t1 | AT5G56160 | 56.308 | 325 | 138 | 3 | 23 | 345 | 15 | 337 | 3.15e-127 | 383 |
MS.gene39730.t1 | AT2G18180 | 41.597 | 476 | 218 | 9 | 121 | 576 | 1 | 436 | 1.26e-124 | 375 |
MS.gene39730.t1 | AT1G19650 | 39.583 | 528 | 265 | 9 | 98 | 590 | 28 | 536 | 6.15e-121 | 369 |
MS.gene39730.t1 | AT2G16380 | 40.821 | 463 | 244 | 8 | 121 | 582 | 1 | 434 | 8.87e-106 | 326 |
MS.gene39730.t1 | AT5G47510 | 49.421 | 259 | 131 | 0 | 78 | 336 | 26 | 284 | 7.29e-92 | 287 |
MS.gene39730.t1 | AT5G47510 | 49.421 | 259 | 131 | 0 | 78 | 336 | 25 | 283 | 1.38e-91 | 287 |
MS.gene39730.t1 | AT5G47510 | 49.421 | 259 | 131 | 0 | 78 | 336 | 26 | 284 | 1.64e-91 | 287 |
MS.gene39730.t1 | AT5G47510 | 49.558 | 226 | 114 | 0 | 111 | 336 | 2 | 227 | 1.09e-80 | 257 |
MS.gene39730.t1 | AT5G47730 | 28.571 | 245 | 154 | 6 | 78 | 310 | 6 | 241 | 3.28e-19 | 89.7 |
MS.gene39730.t1 | AT5G47730 | 28.571 | 245 | 154 | 6 | 78 | 310 | 6 | 241 | 3.28e-19 | 89.7 |
MS.gene39730.t1 | AT1G55840 | 30.081 | 246 | 149 | 7 | 78 | 310 | 6 | 241 | 1.03e-18 | 88.2 |
MS.gene39730.t1 | AT1G55840 | 29.545 | 220 | 139 | 5 | 98 | 310 | 4 | 214 | 2.25e-17 | 83.6 |
MS.gene39730.t1 | AT5G47730 | 28.718 | 195 | 125 | 4 | 121 | 310 | 1 | 186 | 2.95e-15 | 77.0 |
MS.gene39730.t1 | AT5G47730 | 28.718 | 195 | 125 | 4 | 121 | 310 | 1 | 186 | 2.95e-15 | 77.0 |
MS.gene39730.t1 | AT1G01630 | 31.604 | 212 | 120 | 9 | 106 | 313 | 55 | 245 | 9.54e-15 | 75.1 |
Find 126 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTATCAATGTCAAACTTTC+TGG | 0.107098 | 7.1:+44794838 | None:intergenic |
GAAAGTATATACAATTATTT+TGG | 0.177223 | 7.1:+44790866 | None:intergenic |
GCAACAAAGCCAACGAAATT+TGG | 0.209682 | 7.1:-44790421 | MS.gene39730:CDS |
ACATAGGAAATTAGCTTCTT+TGG | 0.223417 | 7.1:+44786472 | None:intergenic |
CACTCATCCTCAGAGGTTTC+AGG | 0.242229 | 7.1:+44795592 | None:intergenic |
TTGGCAGAGGTTGCGGGATT+TGG | 0.245490 | 7.1:-44786266 | MS.gene39730:CDS |
TCCCGCAACCTCTGCCAAAT+TGG | 0.260370 | 7.1:+44786271 | None:intergenic |
ATCAACATCACCAACTTCTT+TGG | 0.271039 | 7.1:+44788362 | None:intergenic |
AGATGAGAGGAGTAGAAGTT+TGG | 0.288981 | 7.1:-44795617 | MS.gene39730:CDS |
CGGATATAAAGGAGCCAATT+TGG | 0.295504 | 7.1:-44786285 | MS.gene39730:CDS |
TAGCATGGTCACTCATAAAT+TGG | 0.316701 | 7.1:-44790356 | MS.gene39730:intron |
GTTCCAGAGCAGATTGTTAG+AGG | 0.330860 | 7.1:-44790761 | MS.gene39730:CDS |
ATGATGTCATACTTTCAAAA+TGG | 0.332799 | 7.1:+44790548 | None:intergenic |
CAAATTGGCTCCTTTATATC+CGG | 0.334464 | 7.1:+44786286 | None:intergenic |
CCAAGACATCCTCCATCATT+TGG | 0.336385 | 7.1:+44790600 | None:intergenic |
GAGTCGTTGAGTCGTATAAA+AGG | 0.338314 | 7.1:-44786175 | MS.gene39730:CDS |
ATTAACAACCCCGGATATAA+AGG | 0.348145 | 7.1:-44786296 | MS.gene39730:CDS |
GCCAATTTGGCAGAGGTTGC+GGG | 0.352833 | 7.1:-44786272 | MS.gene39730:CDS |
TTCTCACGAGGAATTGTTCT+CGG | 0.353462 | 7.1:+44786214 | None:intergenic |
AATAGGTATACTCATCTTCC+AGG | 0.355517 | 7.1:+44785373 | None:intergenic |
GTTACGGCGACTGATGATTC+TGG | 0.366621 | 7.1:-44795668 | None:intergenic |
ATTCACGGCTTCTTCCTCTT+TGG | 0.367424 | 7.1:+44795432 | None:intergenic |
CTCTATTGGAGAAAGGAGTA+TGG | 0.370264 | 7.1:-44794791 | MS.gene39730:CDS |
TATGTAGGATTTCGTATATA+AGG | 0.388118 | 7.1:-44794519 | MS.gene39730:intron |
CAACTTCCACCCAGAAAATC+AGG | 0.390012 | 7.1:+44790630 | None:intergenic |
GTAGTGGGTTCAAGCTAGTA+TGG | 0.398113 | 7.1:-44790926 | MS.gene39730:CDS |
GTTGCTTCTGACGTTGATCC+AGG | 0.406245 | 7.1:+44790196 | None:intergenic |
AGAGCATATCTGCCCACATC+TGG | 0.406835 | 7.1:+44794810 | None:intergenic |
CAGCTCACATTCTCGCTAGA+AGG | 0.408987 | 7.1:+44790142 | None:intergenic |
ATGCCTTCTTGGTTGGTTGT+TGG | 0.409707 | 7.1:+44786357 | None:intergenic |
TGTGGGCAGATATGCTCTAT+TGG | 0.412952 | 7.1:-44794805 | MS.gene39730:CDS |
AGCCAATTTGGCAGAGGTTG+CGG | 0.422478 | 7.1:-44786273 | MS.gene39730:CDS |
AGCTGAGCTTGCTGAGTCAC+TGG | 0.422989 | 7.1:-44785873 | MS.gene39730:CDS |
TTCATTGTCAATGCTGGTAG+TGG | 0.424448 | 7.1:-44790942 | MS.gene39730:CDS |
CAAGACATCCTCCATCATTT+GGG | 0.424664 | 7.1:+44790601 | None:intergenic |
AGTCTCGAGCTAGATCTCTT+AGG | 0.425872 | 7.1:-44795564 | MS.gene39730:CDS |
CAGCATTGACAATGAACATC+TGG | 0.433020 | 7.1:+44790949 | None:intergenic |
AACAATAATGCCAAAGAAGT+TGG | 0.444155 | 7.1:-44788372 | MS.gene39730:CDS |
GCATTGTGTGATAATTATCA+TGG | 0.445665 | 7.1:+44795365 | None:intergenic |
TGATAATTATCATGGGAATC+TGG | 0.446600 | 7.1:+44795373 | None:intergenic |
AAAGTTTGACATTGATAAAA+CGG | 0.449185 | 7.1:-44794834 | MS.gene39730:CDS |
AGAAGCTAATTTCCTATGTC+AGG | 0.450183 | 7.1:-44786468 | MS.gene39730:CDS |
AAATTGGCTCCTTTATATCC+GGG | 0.459277 | 7.1:+44786287 | None:intergenic |
CTAGTATGGAATACAGCAAA+AGG | 0.461742 | 7.1:-44790912 | MS.gene39730:CDS |
TGCCAGTCTAAACGAATTCA+CGG | 0.469564 | 7.1:+44795417 | None:intergenic |
CATTATTGTTTGCCTCAACT+AGG | 0.471434 | 7.1:+44788385 | None:intergenic |
GCAGAGGTTGCGGGATTTGG+AGG | 0.478420 | 7.1:-44786263 | MS.gene39730:CDS |
AACAATTCCTCGTGAGAAAG+AGG | 0.480731 | 7.1:-44786209 | MS.gene39730:CDS |
GAGAGCTGGATTCCACTGGC+TGG | 0.485435 | 7.1:+44786326 | None:intergenic |
CAAGGCTCACTTATAGTCTC+AGG | 0.490076 | 7.1:-44795519 | MS.gene39730:CDS |
TGTTAATTGATTGAGAGAGC+TGG | 0.490138 | 7.1:+44786312 | None:intergenic |
TATGCAGTATTTGCAGCACT+TGG | 0.496661 | 7.1:-44786403 | MS.gene39730:CDS |
GAAGAACTTCCAAATTTCGT+TGG | 0.502786 | 7.1:+44790412 | None:intergenic |
TAACCTCTAACAATCTGCTC+TGG | 0.504827 | 7.1:+44790758 | None:intergenic |
GGTGACATTCATCAACTTGA+TGG | 0.510932 | 7.1:+44794400 | None:intergenic |
CACCCAGAAAATCAGGAAGT+TGG | 0.516687 | 7.1:+44790637 | None:intergenic |
ACTGATTGCACAAAGGTTGA+AGG | 0.517097 | 7.1:+44790166 | None:intergenic |
CAGATGTTCATTGTCAATGC+TGG | 0.517230 | 7.1:-44790948 | MS.gene39730:CDS |
CCAAATGATGGAGGATGTCT+TGG | 0.520026 | 7.1:-44790600 | MS.gene39730:CDS |
TTGATAAAACGGTCCAGATG+TGG | 0.520171 | 7.1:-44794823 | MS.gene39730:CDS |
AGCCGTGAATTCGTTTAGAC+TGG | 0.521499 | 7.1:-44795419 | MS.gene39730:CDS |
TGTTAGAGGTTATAGACTCA+TGG | 0.523254 | 7.1:-44790747 | MS.gene39730:intron |
AATTTATGAGTGACCATGCT+AGG | 0.523447 | 7.1:+44790358 | None:intergenic |
TTGAGAGAGCTGGATTCCAC+TGG | 0.524978 | 7.1:+44786322 | None:intergenic |
TGTCATACTTTCAAAATGGA+AGG | 0.528732 | 7.1:+44790552 | None:intergenic |
TTGGATCTAACAAGGGACCT+TGG | 0.533848 | 7.1:-44790581 | MS.gene39730:CDS |
CCAGTGTATATTGAGAGACT+TGG | 0.541011 | 7.1:-44794434 | MS.gene39730:CDS |
GCCTCAACTAGGTTACAGAT+AGG | 0.545335 | 7.1:+44788396 | None:intergenic |
CGTATATAAGGAGTTTGAAG+AGG | 0.552893 | 7.1:-44794507 | MS.gene39730:CDS |
TTAATGCTGCAGGTTTCTGA+AGG | 0.556005 | 7.1:-44794861 | MS.gene39730:intron |
AGTTGTTCATGCCCAAATGA+TGG | 0.558876 | 7.1:-44790612 | MS.gene39730:CDS |
GTTCAGCGTTATTACCCTCA+TGG | 0.565031 | 7.1:-44794485 | MS.gene39730:CDS |
AGATATGCTCTATTGGAGAA+AGG | 0.568841 | 7.1:-44794798 | MS.gene39730:CDS |
TAAAGGAGCCAATTTGGCAG+AGG | 0.574281 | 7.1:-44786279 | MS.gene39730:CDS |
ATAGGTATACTCATCTTCCA+GGG | 0.575238 | 7.1:+44785374 | None:intergenic |
TAATAGTTCAAGAAGATGAG+AGG | 0.575754 | 7.1:-44795630 | MS.gene39730:CDS |
TTTGCTGCTATAGAACATGC+AGG | 0.579513 | 7.1:+44794314 | None:intergenic |
TTCCTATGTCAGGAGTACAT+TGG | 0.581773 | 7.1:-44786458 | MS.gene39730:CDS |
TGATAAAACGGTCCAGATGT+GGG | 0.584450 | 7.1:-44794822 | MS.gene39730:CDS |
GTCATACTTTCAAAATGGAA+GGG | 0.587968 | 7.1:+44790553 | None:intergenic |
TATTACCCTCATGGTATGCA+TGG | 0.591911 | 7.1:-44794476 | MS.gene39730:CDS |
AAAATGGAAGGGTCATTCCA+AGG | 0.592390 | 7.1:+44790564 | None:intergenic |
CATTGTGTGATAATTATCAT+GGG | 0.600169 | 7.1:+44795366 | None:intergenic |
TCATTGTCAATGCTGGTAGT+GGG | 0.602158 | 7.1:-44790941 | MS.gene39730:CDS |
AGCACTGAAATATCTGAACC+TGG | 0.603140 | 7.1:-44790214 | MS.gene39730:CDS |
CTGCCAACAACCAACCAAGA+AGG | 0.607907 | 7.1:-44786360 | MS.gene39730:CDS |
CTGAAACCTCTGAGGATGAG+TGG | 0.608958 | 7.1:-44795591 | MS.gene39730:CDS |
TGCATGGTGTGGACAAAGAG+GGG | 0.609270 | 7.1:-44794460 | MS.gene39730:CDS |
TGACTTGCAAAAGACAAGGA+AGG | 0.610536 | 7.1:-44786143 | MS.gene39730:intron |
TACAGGGGACAAAATCATGT+TGG | 0.611303 | 7.1:-44785417 | MS.gene39730:intron |
ATGCATGGTGTGGACAAAGA+GGG | 0.611322 | 7.1:-44794461 | MS.gene39730:CDS |
AATTGGCTCCTTTATATCCG+GGG | 0.612008 | 7.1:+44786288 | None:intergenic |
AGGATGTCTTGGATCTAACA+AGG | 0.613016 | 7.1:-44790589 | MS.gene39730:CDS |
ATCCAATGTACTCCTGACAT+AGG | 0.617075 | 7.1:+44786456 | None:intergenic |
CCAAGTCTCTCAATATACAC+TGG | 0.623189 | 7.1:+44794434 | None:intergenic |
GAGCAATGACTGCTTCAACA+AGG | 0.624288 | 7.1:-44795537 | MS.gene39730:CDS |
GTGACATTCATCAACTTGAT+GGG | 0.624480 | 7.1:+44794401 | None:intergenic |
ACCTATCTGTAACCTAGTTG+AGG | 0.624693 | 7.1:-44788397 | MS.gene39730:CDS |
AGATGTTCGGGATGCCAAAG+AGG | 0.626648 | 7.1:-44795446 | MS.gene39730:CDS |
CCCTCATGGTATGCATGGTG+TGG | 0.629363 | 7.1:-44794471 | MS.gene39730:CDS |
CACCGAGTCATATCCTAGCA+TGG | 0.636928 | 7.1:-44790371 | MS.gene39730:CDS |
TATGCATGGTGTGGACAAAG+AGG | 0.640193 | 7.1:-44794462 | MS.gene39730:CDS |
GACCATGCTAGGATATGACT+CGG | 0.641917 | 7.1:+44790369 | None:intergenic |
GCATCAGAAAATCCAGCCAG+TGG | 0.642065 | 7.1:-44786338 | MS.gene39730:CDS |
AGAATATCCTCTTTCTCACG+AGG | 0.648401 | 7.1:+44786202 | None:intergenic |
CTTCCGCCACTCATCCTCAG+AGG | 0.659075 | 7.1:+44795585 | None:intergenic |
TTGCTGCTATAGAACATGCA+GGG | 0.661177 | 7.1:+44794315 | None:intergenic |
ATAATTATCACACAATGCTG+AGG | 0.661865 | 7.1:-44795360 | MS.gene39730:intron |
CCACACCATGCATACCATGA+GGG | 0.664021 | 7.1:+44794471 | None:intergenic |
TCTCAATCAATTAACAACCC+CGG | 0.665682 | 7.1:-44786305 | MS.gene39730:CDS |
GGAGGCAGTAGTGACTGAGA+TGG | 0.665960 | 7.1:-44786245 | MS.gene39730:CDS |
CATGTTCTATAGCAGCAAAG+CGG | 0.666814 | 7.1:-44794310 | MS.gene39730:CDS |
ACTACAATAATTGATGTGCA+CGG | 0.666903 | 7.1:-44794272 | MS.gene39730:CDS |
AATTTGACTTGCAAAAGACA+AGG | 0.678812 | 7.1:-44786147 | MS.gene39730:CDS |
AAACCTCTGAGGATGAGTGG+CGG | 0.687461 | 7.1:-44795588 | MS.gene39730:CDS |
TCCACACCATGCATACCATG+AGG | 0.688993 | 7.1:+44794470 | None:intergenic |
AATAATTGATGTGCACGGCG+TGG | 0.689010 | 7.1:-44794267 | MS.gene39730:intron |
GGATGTCTTGGATCTAACAA+GGG | 0.691292 | 7.1:-44790588 | MS.gene39730:CDS |
AGAAGGAACTGATTGCACAA+AGG | 0.692917 | 7.1:+44790159 | None:intergenic |
TTTGGAGCCTGAAACCTCTG+AGG | 0.697641 | 7.1:-44795599 | MS.gene39730:CDS |
ATGGTGTGGACAAAGAGGGG+CGG | 0.702284 | 7.1:-44794457 | MS.gene39730:CDS |
CTAGGTTACAGATAGGTGCA+CGG | 0.703555 | 7.1:+44788403 | None:intergenic |
GAAGCGTAATAAGCGAGTAG+CGG | 0.706077 | 7.1:-44795497 | MS.gene39730:CDS |
TAGGTATACTCATCTTCCAG+GGG | 0.708380 | 7.1:+44785375 | None:intergenic |
TGTTCATGCCCAAATGATGG+AGG | 0.726201 | 7.1:-44790609 | MS.gene39730:CDS |
TGATGGCGATAATTACCCTG+AGG | 0.747686 | 7.1:-44794104 | MS.gene39730:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 44785384 | 44795677 | 44785384 | ID=MS.gene39730 |
chr7.1 | mRNA | 44785384 | 44795677 | 44785384 | ID=MS.gene39730.t1;Parent=MS.gene39730 |
chr7.1 | exon | 44795361 | 44795677 | 44795361 | ID=MS.gene39730.t1.exon1;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44795361 | 44795677 | 44795361 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44794772 | 44794871 | 44794772 | ID=MS.gene39730.t1.exon2;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44794772 | 44794871 | 44794772 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44794268 | 44794534 | 44794268 | ID=MS.gene39730.t1.exon3;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44794268 | 44794534 | 44794268 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44794105 | 44794182 | 44794105 | ID=MS.gene39730.t1.exon4;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44794105 | 44794182 | 44794105 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44790878 | 44790979 | 44790878 | ID=MS.gene39730.t1.exon5;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44790878 | 44790979 | 44790878 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44790748 | 44790797 | 44790748 | ID=MS.gene39730.t1.exon6;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44790748 | 44790797 | 44790748 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44790560 | 44790659 | 44790560 | ID=MS.gene39730.t1.exon7;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44790560 | 44790659 | 44790560 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44790357 | 44790461 | 44790357 | ID=MS.gene39730.t1.exon8;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44790357 | 44790461 | 44790357 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44790150 | 44790242 | 44790150 | ID=MS.gene39730.t1.exon9;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44790150 | 44790242 | 44790150 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44788355 | 44788439 | 44788355 | ID=MS.gene39730.t1.exon10;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44788355 | 44788439 | 44788355 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44786144 | 44786523 | 44786144 | ID=MS.gene39730.t1.exon11;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44786144 | 44786523 | 44786144 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44785847 | 44785921 | 44785847 | ID=MS.gene39730.t1.exon12;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44785847 | 44785921 | 44785847 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
chr7.1 | exon | 44785384 | 44785434 | 44785384 | ID=MS.gene39730.t1.exon13;Parent=MS.gene39730.t1 |
chr7.1 | CDS | 44785384 | 44785434 | 44785384 | ID=cds.MS.gene39730.t1;Parent=MS.gene39730.t1 |
Gene Sequence |
Protein sequence |