Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39855.t1 | XP_013460341.1 | 66.3 | 92 | 1 | 1 | 241 | 302 | 561 | 652 | 1.00E-18 | 104.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39855.t1 | Q94K71 | 88.5 | 52 | 6 | 0 | 67 | 118 | 252 | 303 | 7.5e-18 | 92.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39855.t1 | A0A072UXV6 | 66.3 | 92 | 1 | 1 | 241 | 302 | 561 | 652 | 7.5e-19 | 104.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057452 | MS.gene39855 | -0.80811 | 3.64E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39855.t1 | MTR_3g075230 | 92.308 | 52 | 4 | 0 | 67 | 118 | 256 | 307 | 2.80e-22 | 95.5 |
| MS.gene39855.t1 | MTR_3g090510 | 65.753 | 73 | 23 | 1 | 19 | 89 | 202 | 274 | 1.07e-21 | 95.1 |
| MS.gene39855.t1 | MTR_1g037030 | 78.431 | 51 | 11 | 0 | 15 | 65 | 115 | 165 | 7.13e-21 | 89.7 |
| MS.gene39855.t1 | MTR_4g061200 | 54.545 | 88 | 33 | 1 | 19 | 106 | 198 | 278 | 4.90e-20 | 90.9 |
| MS.gene39855.t1 | MTR_4g061200 | 69.231 | 65 | 18 | 1 | 19 | 81 | 198 | 262 | 5.23e-20 | 90.9 |
| MS.gene39855.t1 | MTR_4g061200 | 54.545 | 88 | 33 | 1 | 19 | 106 | 198 | 278 | 5.71e-20 | 89.7 |
| MS.gene39855.t1 | MTR_4g061200 | 69.231 | 65 | 18 | 1 | 19 | 81 | 198 | 262 | 6.33e-20 | 90.1 |
| MS.gene39855.t1 | MTR_3g465430 | 60.759 | 79 | 1 | 1 | 241 | 289 | 561 | 639 | 4.02e-19 | 88.6 |
| MS.gene39855.t1 | MTR_7g061190 | 59.155 | 71 | 26 | 2 | 21 | 88 | 50 | 120 | 2.38e-18 | 80.9 |
| MS.gene39855.t1 | MTR_2g093060 | 61.111 | 72 | 25 | 2 | 20 | 88 | 202 | 273 | 9.41e-18 | 84.0 |
| MS.gene39855.t1 | MTR_2g093060 | 61.111 | 72 | 25 | 2 | 20 | 88 | 202 | 273 | 9.53e-18 | 84.0 |
| MS.gene39855.t1 | MTR_4g094868 | 41.803 | 122 | 58 | 3 | 21 | 134 | 89 | 205 | 2.59e-17 | 82.0 |
| MS.gene39855.t1 | MTR_4g094868 | 41.803 | 122 | 58 | 3 | 21 | 134 | 245 | 361 | 2.97e-17 | 82.8 |
| MS.gene39855.t1 | MTR_2g093060 | 43.590 | 117 | 47 | 3 | 20 | 124 | 202 | 311 | 4.45e-17 | 82.0 |
| MS.gene39855.t1 | MTR_7g100590 | 58.333 | 72 | 27 | 2 | 20 | 88 | 207 | 278 | 5.20e-17 | 82.0 |
| MS.gene39855.t1 | MTR_4g094868 | 59.155 | 71 | 26 | 2 | 21 | 88 | 245 | 315 | 5.24e-17 | 82.0 |
| MS.gene39855.t1 | MTR_5g016810 | 60.563 | 71 | 25 | 2 | 21 | 88 | 221 | 291 | 6.36e-17 | 81.6 |
| MS.gene39855.t1 | MTR_7g060560 | 62.121 | 66 | 23 | 1 | 26 | 89 | 201 | 266 | 1.13e-16 | 80.5 |
| MS.gene39855.t1 | MTR_5g016810 | 69.388 | 49 | 15 | 0 | 21 | 69 | 221 | 269 | 1.99e-15 | 77.4 |
| MS.gene39855.t1 | MTR_7g055620 | 72.727 | 44 | 12 | 0 | 26 | 69 | 6 | 49 | 6.61e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39855.t1 | AT3G48420 | 88.462 | 52 | 6 | 0 | 67 | 118 | 252 | 303 | 3.25e-19 | 87.0 |
| MS.gene39855.t1 | AT2G28550 | 56.338 | 71 | 31 | 0 | 20 | 90 | 221 | 291 | 9.72e-18 | 83.2 |
| MS.gene39855.t1 | AT2G28550 | 75.510 | 49 | 12 | 0 | 20 | 68 | 55 | 103 | 2.10e-17 | 81.3 |
| MS.gene39855.t1 | AT4G36920 | 44.037 | 109 | 56 | 3 | 21 | 124 | 200 | 308 | 2.28e-17 | 82.8 |
| MS.gene39855.t1 | AT4G36920 | 44.037 | 109 | 56 | 3 | 21 | 124 | 200 | 308 | 2.28e-17 | 82.8 |
| MS.gene39855.t1 | AT2G28550 | 77.083 | 48 | 11 | 0 | 20 | 67 | 221 | 268 | 3.78e-17 | 80.5 |
| MS.gene39855.t1 | AT2G28550 | 77.083 | 48 | 11 | 0 | 20 | 67 | 221 | 268 | 3.78e-17 | 80.5 |
| MS.gene39855.t1 | AT2G28550 | 71.154 | 52 | 15 | 0 | 20 | 71 | 221 | 272 | 3.89e-17 | 82.4 |
| MS.gene39855.t1 | AT2G28550 | 75.510 | 49 | 12 | 0 | 20 | 68 | 221 | 269 | 9.00e-17 | 81.3 |
| MS.gene39855.t1 | AT5G67180 | 54.054 | 74 | 31 | 2 | 21 | 92 | 165 | 237 | 2.91e-16 | 77.8 |
| MS.gene39855.t1 | AT5G67180 | 56.338 | 71 | 28 | 2 | 21 | 88 | 165 | 235 | 1.01e-15 | 76.6 |
| MS.gene39855.t1 | AT5G67180 | 56.338 | 71 | 28 | 2 | 21 | 88 | 165 | 235 | 1.27e-15 | 77.0 |
| MS.gene39855.t1 | AT5G67180 | 56.338 | 71 | 28 | 2 | 21 | 88 | 165 | 235 | 1.52e-15 | 76.3 |
Find 70 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTACATGGGAGGATTAA+AGG | 0.234605 | 5.4:+68657993 | MS.gene39855:CDS |
| AGTTGATGATGTTGGTTCTT+TGG | 0.313516 | 5.4:+68658103 | MS.gene39855:intron |
| GTTTCAGAACTTACCTCTTA+AGG | 0.317681 | 5.4:-68657279 | None:intergenic |
| GAACGATTATATACCTTTGT+AGG | 0.358428 | 5.4:-68657113 | None:intergenic |
| CAGTATTTGCCGGTAGAATC+AGG | 0.358742 | 5.4:-68658549 | None:intergenic |
| AACTCTAGCAGGCTCTTTCC+AGG | 0.361101 | 5.4:-68658155 | None:intergenic |
| TTTCAGAACTTACCTCTTAA+GGG | 0.361709 | 5.4:-68657278 | None:intergenic |
| ATTGCACTTGCAGTTCATAT+TGG | 0.363079 | 5.4:+68657207 | MS.gene39855:intron |
| CAAAAGTCCTACAGATCATT+AGG | 0.366008 | 5.4:+68654301 | MS.gene39855:CDS |
| GCATTGATTCTTCCCTTAAG+AGG | 0.406835 | 5.4:+68657266 | MS.gene39855:CDS |
| GATAGACTTGCAGTATTTGC+CGG | 0.410071 | 5.4:-68658559 | None:intergenic |
| GACGTTGTATTTGACTTCAT+TGG | 0.414112 | 5.4:+68656148 | MS.gene39855:CDS |
| AAATGCATTATGCAGATATA+CGG | 0.416006 | 5.4:+68656102 | MS.gene39855:intron |
| TTAGATGGACAATGAATTTG+AGG | 0.417084 | 5.4:+68656580 | MS.gene39855:intron |
| CAGATCATTAGGATCATCTC+AGG | 0.432627 | 5.4:+68654312 | MS.gene39855:CDS |
| GCAAAATCAGGCTCTACTAT+TGG | 0.434597 | 5.4:+68657244 | MS.gene39855:CDS |
| TTTACTATGAGAGAGAGAAA+TGG | 0.447988 | 5.4:+68656719 | MS.gene39855:intron |
| CTAGCAGCCGCTAAAGTAGC+TGG | 0.453585 | 5.4:+68655849 | MS.gene39855:CDS |
| TGGCAGCAAAGTGCAAAATC+AGG | 0.459814 | 5.4:+68657232 | MS.gene39855:CDS |
| GTCTATCACAAAATCAAAGA+AGG | 0.465270 | 5.4:+68658575 | MS.gene39855:CDS |
| GTGGTCGAGGACAGCGCTAT+AGG | 0.473850 | 5.4:+68655825 | MS.gene39855:CDS |
| TGGCAGTTGGGAAGCTCGAA+TGG | 0.485503 | 5.4:+68654851 | MS.gene39855:CDS |
| GCTAACTACATAACTTTACA+TGG | 0.496572 | 5.4:+68657981 | MS.gene39855:CDS |
| CTTCATCCCAGCTACTTTAG+CGG | 0.503426 | 5.4:-68655856 | None:intergenic |
| GCCAGATCAAACCTCTCCTC+AGG | 0.506138 | 5.4:-68656178 | None:intergenic |
| CAGATGCTAGAGAATGAGCC+TGG | 0.507226 | 5.4:+68658137 | MS.gene39855:CDS |
| CACTGCACAAATGTGGCAGT+TGG | 0.508097 | 5.4:+68654838 | MS.gene39855:CDS |
| GCTCGAATGGGTCAATTCCT+TGG | 0.510521 | 5.4:+68654864 | MS.gene39855:CDS |
| ACTGCACAAATGTGGCAGTT+GGG | 0.511914 | 5.4:+68654839 | MS.gene39855:CDS |
| AGATACTTGCCTGATTCTAC+CGG | 0.514786 | 5.4:+68658540 | MS.gene39855:CDS |
| AACGATTATATACCTTTGTA+GGG | 0.515993 | 5.4:-68657112 | None:intergenic |
| ACAAGCAACTTCTGATATGA+TGG | 0.520935 | 5.4:+68656607 | MS.gene39855:CDS |
| TTACAGATGTGTCGTGGTCG+AGG | 0.524433 | 5.4:+68655812 | MS.gene39855:intron |
| AGTTATGTAGTTAGCCTCCA+TGG | 0.526706 | 5.4:-68657973 | None:intergenic |
| CTGAAAGCAGGAACGAAAAG+AGG | 0.532794 | 5.4:-68657475 | None:intergenic |
| TCCCTCTCATAGCTGAAAGC+AGG | 0.546840 | 5.4:-68657487 | None:intergenic |
| TCCTGCTTTCAGCTATGAGA+GGG | 0.547312 | 5.4:+68657486 | MS.gene39855:CDS |
| TTCCTGCTTTCAGCTATGAG+AGG | 0.550089 | 5.4:+68657485 | MS.gene39855:CDS |
| GTCTGTCGCTACTACTCTTG+AGG | 0.550215 | 5.4:+68658180 | MS.gene39855:CDS |
| TTGGTGATCCTCCTGAGGAG+AGG | 0.552332 | 5.4:+68656167 | MS.gene39855:CDS |
| TATTAGAGCTTTGTTAACCA+TGG | 0.554431 | 5.4:+68657956 | MS.gene39855:CDS |
| AGATGATCCTAATGATCTGT+AGG | 0.555523 | 5.4:-68654308 | None:intergenic |
| TTATGCAGATATACGGCAGA+TGG | 0.564981 | 5.4:+68656109 | MS.gene39855:intron |
| ATGGACAATGAATTTGAGGA+TGG | 0.570269 | 5.4:+68656584 | MS.gene39855:CDS |
| GGCAGTTGGGAAGCTCGAAT+GGG | 0.571868 | 5.4:+68654852 | MS.gene39855:CDS |
| AGTGTATAGTAACAAAGAGC+GGG | 0.580787 | 5.4:+68655877 | MS.gene39855:CDS |
| TGGTATTCAGTTGATGATGT+TGG | 0.588095 | 5.4:+68658095 | MS.gene39855:intron |
| GCGACAGACGAAACTCTAGC+AGG | 0.588210 | 5.4:-68658166 | None:intergenic |
| TCTATCACAAAATCAAAGAA+GGG | 0.593364 | 5.4:+68658576 | MS.gene39855:CDS |
| AGATCATTAGGATCATCTCA+GGG | 0.599057 | 5.4:+68654313 | MS.gene39855:CDS |
| TCTTATTTACAGATGTGTCG+TGG | 0.600555 | 5.4:+68655806 | MS.gene39855:intron |
| TGTTGCAAAATGCCCTACAA+AGG | 0.603887 | 5.4:+68657100 | MS.gene39855:CDS |
| AATGGAAGGACAATAGAAAG+TGG | 0.612556 | 5.4:+68656737 | MS.gene39855:CDS |
| ACTTGCAGTTCATATTGGCA+TGG | 0.614305 | 5.4:+68657212 | MS.gene39855:intron |
| AGGATCATCTCAGGGGTGGA+CGG | 0.614978 | 5.4:+68654321 | MS.gene39855:CDS |
| TAGCAGCCGCTAAAGTAGCT+GGG | 0.615799 | 5.4:+68655850 | MS.gene39855:CDS |
| TAGAGCTTTGTTAACCATGG+AGG | 0.620374 | 5.4:+68657959 | MS.gene39855:CDS |
| CTTCATTGGTGATCCTCCTG+AGG | 0.623430 | 5.4:+68656162 | MS.gene39855:CDS |
| AGATCAAACCTCTCCTCAGG+AGG | 0.625024 | 5.4:-68656175 | None:intergenic |
| ACTACATAACTTTACATGGG+AGG | 0.625525 | 5.4:+68657985 | MS.gene39855:CDS |
| AAGTGTATAGTAACAAAGAG+CGG | 0.628437 | 5.4:+68655876 | MS.gene39855:CDS |
| CATTAGGATCATCTCAGGGG+TGG | 0.630656 | 5.4:+68654317 | MS.gene39855:CDS |
| GGAGTAACACTGCACAAATG+TGG | 0.639362 | 5.4:+68654831 | MS.gene39855:CDS |
| AGTGGTTCAATTGATTCACA+TGG | 0.642905 | 5.4:+68656755 | MS.gene39855:CDS |
| TGATGGCAAGCAGTCAACAA+AGG | 0.657586 | 5.4:+68656624 | MS.gene39855:CDS |
| AGAGGGAGTTCGAAGTACAG+AGG | 0.669918 | 5.4:+68654810 | MS.gene39855:CDS |
| CTAACTACATAACTTTACAT+GGG | 0.671104 | 5.4:+68657982 | MS.gene39855:CDS |
| CTATGAGAGAGAGAAATGGA+AGG | 0.671735 | 5.4:+68656723 | MS.gene39855:intron |
| AAATGTTTCTGCAAGCTGTG+CGG | 0.691119 | 5.4:-68657075 | None:intergenic |
| GATCATTAGGATCATCTCAG+GGG | 0.736352 | 5.4:+68654314 | MS.gene39855:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAATATTATTGATCA+TGG | + | chr5.4:68658648-68658667 | MS.gene39855:intron | 10.0% |
| !!! | ATAATCTTTTTTATTGTAAT+AGG | + | chr5.4:68656853-68656872 | MS.gene39855:intron | 10.0% |
| !!! | ATTATATGATTTACTATTTT+AGG | + | chr5.4:68654392-68654411 | MS.gene39855:intron | 10.0% |
| !!! | TTGTGTAATTAATTTTTTTA+TGG | + | chr5.4:68654525-68654544 | MS.gene39855:intron | 10.0% |
| !! | ACTTCAGTTAAATTAAAAAT+AGG | - | chr5.4:68654903-68654922 | None:intergenic | 15.0% |
| !! | ATATTTATACGAAAATGAAA+GGG | - | chr5.4:68657787-68657806 | None:intergenic | 15.0% |
| !! | CTTTGTTCAATTTATTTAAA+TGG | + | chr5.4:68655206-68655225 | MS.gene39855:intron | 15.0% |
| !! | TAATTTAACTGAAGTTATTT+AGG | + | chr5.4:68654908-68654927 | MS.gene39855:intron | 15.0% |
| !! | TATATTTATACGAAAATGAA+AGG | - | chr5.4:68657788-68657807 | None:intergenic | 15.0% |
| !! | TCAACTATTTAACATATAAA+TGG | - | chr5.4:68656904-68656923 | None:intergenic | 15.0% |
| !! | TCATATATTAATTTCCAAAT+TGG | + | chr5.4:68657405-68657424 | MS.gene39855:intron | 15.0% |
| !! | TTCAATTTATTTAAATGGTT+TGG | + | chr5.4:68655211-68655230 | MS.gene39855:intron | 15.0% |
| !!! | AATTTGTATTTGATTTTTGT+AGG | + | chr5.4:68654443-68654462 | MS.gene39855:intron | 15.0% |
| !!! | ACTATTTTTTTCTTTGATTT+TGG | + | chr5.4:68654356-68654375 | MS.gene39855:intron | 15.0% |
| !!! | GATTATTTTGTTTTTTTAGA+TGG | + | chr5.4:68656565-68656584 | MS.gene39855:intron | 15.0% |
| !!! | TTTATTTTTCACTTCATTTT+AGG | + | chr5.4:68654137-68654156 | MS.gene39855:intron | 15.0% |
| !! | AAATAAAAACTTGGAAAGAT+AGG | - | chr5.4:68654124-68654143 | None:intergenic | 20.0% |
| !! | AATTTCCAAATTGGTTAATT+TGG | + | chr5.4:68657414-68657433 | MS.gene39855:intron | 20.0% |
| !! | CAGGAAGAATTATAATAAAA+TGG | - | chr5.4:68656964-68656983 | None:intergenic | 20.0% |
| !! | GAAAAGATCAATGTTTATAT+TGG | + | chr5.4:68656351-68656370 | MS.gene39855:intron | 20.0% |
| !! | TAGGTCAAATTTGAAAAATT+AGG | - | chr5.4:68658244-68658263 | None:intergenic | 20.0% |
| !! | TATAACCAAATTAACCAATT+TGG | - | chr5.4:68657422-68657441 | None:intergenic | 20.0% |
| !! | TCAATTCATTAAAACTATCA+AGG | - | chr5.4:68655395-68655414 | None:intergenic | 20.0% |
| !! | TGAAGTGAAAAATAAAAACT+TGG | - | chr5.4:68654133-68654152 | None:intergenic | 20.0% |
| !! | TTGTAGTTTATCTAAATTAG+AGG | + | chr5.4:68656798-68656817 | MS.gene39855:intron | 20.0% |
| !!! | AATAAGTTGCTCTAAAATTT+TGG | - | chr5.4:68655629-68655648 | None:intergenic | 20.0% |
| !!! | AATTTATTTAAATGGTTTGG+TGG | + | chr5.4:68655214-68655233 | MS.gene39855:intron | 20.0% |
| !!! | ATGGTCTTTTTTATATTTTC+AGG | + | chr5.4:68658667-68658686 | MS.gene39855:intron | 20.0% |
| !!! | CATTTTATTATAATTCTTCC+TGG | + | chr5.4:68656962-68656981 | MS.gene39855:intron | 20.0% |
| !!! | GCAACTTTATGTTTTTTTAT+AGG | + | chr5.4:68655925-68655944 | MS.gene39855:intron | 20.0% |
| !!! | GTATATTTCTATTTACTGAA+TGG | + | chr5.4:68655899-68655918 | MS.gene39855:intron | 20.0% |
| !!! | TAATGTTGTTGGATTATTTT+GGG | + | chr5.4:68656502-68656521 | MS.gene39855:intron | 20.0% |
| !!! | TAGTGTAACATTTTAAATTG+TGG | + | chr5.4:68655022-68655041 | MS.gene39855:intron | 20.0% |
| !!! | TGATAGTTTTAATGAATTGA+AGG | + | chr5.4:68655395-68655414 | MS.gene39855:intron | 20.0% |
| !!! | TTAATGTTGTTGGATTATTT+TGG | + | chr5.4:68656501-68656520 | MS.gene39855:intron | 20.0% |
| ! | AAAGAAAATGAATAGAAAGG+AGG | - | chr5.4:68655124-68655143 | None:intergenic | 25.0% |
| ! | AAATGCATTATGCAGATATA+CGG | + | chr5.4:68656102-68656121 | MS.gene39855:intron | 25.0% |
| ! | AACCTATCTGATACTTTATT+TGG | + | chr5.4:68655695-68655714 | MS.gene39855:intron | 25.0% |
| ! | AACGATTATATACCTTTGTA+GGG | - | chr5.4:68657115-68657134 | None:intergenic | 25.0% |
| ! | AATTTAACAGTTGCTTATTC+TGG | + | chr5.4:68656649-68656668 | MS.gene39855:intron | 25.0% |
| ! | AGGAAAGAAAATGAATAGAA+AGG | - | chr5.4:68655127-68655146 | None:intergenic | 25.0% |
| ! | AGTATCAATGCTACATATAT+AGG | - | chr5.4:68658263-68658282 | None:intergenic | 25.0% |
| ! | ATATTGAAACATCATGTATC+TGG | + | chr5.4:68654993-68655012 | MS.gene39855:intron | 25.0% |
| ! | ATGTAGTTAGATAAGTTTCT+AGG | + | chr5.4:68657852-68657871 | MS.gene39855:intron | 25.0% |
| ! | ATTTAACAGTTGCTTATTCT+GGG | + | chr5.4:68656650-68656669 | MS.gene39855:intron | 25.0% |
| ! | CTAACTACATAACTTTACAT+GGG | + | chr5.4:68657982-68658001 | MS.gene39855:CDS | 25.0% |
| ! | GAATTGAAGGATATAGATTA+TGG | + | chr5.4:68655408-68655427 | MS.gene39855:intron | 25.0% |
| ! | TCTATCACAAAATCAAAGAA+GGG | + | chr5.4:68658576-68658595 | MS.gene39855:CDS | 25.0% |
| ! | TGGATCATTGTTTCATAATT+TGG | + | chr5.4:68657361-68657380 | MS.gene39855:intron | 25.0% |
| ! | TTCGTATAAATATAGAGCAT+TGG | + | chr5.4:68657794-68657813 | MS.gene39855:intron | 25.0% |
| ! | TTGAACAAAGTTATTGTATC+AGG | - | chr5.4:68655196-68655215 | None:intergenic | 25.0% |
| ! | TTGATGAATGTGAAATTAGA+TGG | + | chr5.4:68654687-68654706 | MS.gene39855:intron | 25.0% |
| ! | TTGATGCTAATTAATGTTGT+TGG | + | chr5.4:68656491-68656510 | MS.gene39855:intron | 25.0% |
| !! | AAATCAATGTTTTCTCAAGA+GGG | + | chr5.4:68654793-68654812 | MS.gene39855:CDS | 25.0% |
| !! | AACATTGATCTTTTCATCAT+TGG | - | chr5.4:68656346-68656365 | None:intergenic | 25.0% |
| !! | ATCCAAATAAAGTATCAGAT+AGG | - | chr5.4:68655700-68655719 | None:intergenic | 25.0% |
| !! | TTATGATGATGATCTTAAAC+AGG | + | chr5.4:68654643-68654662 | MS.gene39855:intron | 25.0% |
| !! | TTTCTATTCATTTTCTTTCC+TGG | + | chr5.4:68655126-68655145 | MS.gene39855:intron | 25.0% |
| !!! | AAGAGAAAAAGGTTTTGATT+TGG | + | chr5.4:68657737-68657756 | MS.gene39855:intron | 25.0% |
| !!! | AATTTTGTTTTTGAACTGCA+TGG | + | chr5.4:68655749-68655768 | MS.gene39855:intron | 25.0% |
| !!! | AGTTACTTTTGTTTATGGAA+TGG | + | chr5.4:68657522-68657541 | MS.gene39855:CDS | 25.0% |
| !!! | GTTGACTTTTGTATTTTATC+AGG | + | chr5.4:68657032-68657051 | MS.gene39855:intron | 25.0% |
| !!! | TTACGAGTTACTTTTGTTTA+TGG | + | chr5.4:68657517-68657536 | MS.gene39855:CDS | 25.0% |
| !!! | TTGTATTTGATTTTTGTAGG+TGG | + | chr5.4:68654446-68654465 | MS.gene39855:intron | 25.0% |
| !!! | TTTTCATCATTGGCTTAATA+GGG | - | chr5.4:68656336-68656355 | None:intergenic | 25.0% |
| AAAAGTTAATGTATCAGAGC+TGG | - | chr5.4:68655172-68655191 | None:intergenic | 30.0% | |
| AAACATCAGGAAGTTGTTTA+AGG | + | chr5.4:68655255-68655274 | MS.gene39855:intron | 30.0% | |
| AAGTGTATAGTAACAAAGAG+CGG | + | chr5.4:68655876-68655895 | MS.gene39855:CDS | 30.0% | |
| AGCAATTCTCTGTTATATCA+CGG | - | chr5.4:68655060-68655079 | None:intergenic | 30.0% | |
| AGTAAACATCTTCCAGATAA+AGG | - | chr5.4:68656705-68656724 | None:intergenic | 30.0% | |
| ATATTCGAGTATAAACCAGT+TGG | + | chr5.4:68657678-68657697 | MS.gene39855:intron | 30.0% | |
| ATGCCATAAAATTCTACTGT+TGG | - | chr5.4:68655597-68655616 | None:intergenic | 30.0% | |
| ATTGCTTCTACAGACAAAAA+TGG | - | chr5.4:68657605-68657624 | None:intergenic | 30.0% | |
| ATTTGAGGAGAAGCAAATAA+AGG | + | chr5.4:68657821-68657840 | MS.gene39855:intron | 30.0% | |
| CACGTGTTAGTAAATACAAT+TGG | + | chr5.4:68658448-68658467 | MS.gene39855:intron | 30.0% | |
| CAGCAATAGAGAAAATCAAA+AGG | - | chr5.4:68654238-68654257 | None:intergenic | 30.0% | |
| GAACATATTAAACTGTCAGA+AGG | + | chr5.4:68658509-68658528 | MS.gene39855:intron | 30.0% | |
| GAACGATTATATACCTTTGT+AGG | - | chr5.4:68657116-68657135 | None:intergenic | 30.0% | |
| GCTAACTACATAACTTTACA+TGG | + | chr5.4:68657981-68658000 | MS.gene39855:CDS | 30.0% | |
| GTCTATCACAAAATCAAAGA+AGG | + | chr5.4:68658575-68658594 | MS.gene39855:CDS | 30.0% | |
| TAGAATTCAGAAGAAGAATC+AGG | + | chr5.4:68658043-68658062 | MS.gene39855:intron | 30.0% | |
| TGATAGCTTATGAAAGTTAC+TGG | - | chr5.4:68657388-68657407 | None:intergenic | 30.0% | |
| TTAGATGGACAATGAATTTG+AGG | + | chr5.4:68656580-68656599 | MS.gene39855:intron | 30.0% | |
| TTGCTTCTACAGACAAAAAT+GGG | - | chr5.4:68657604-68657623 | None:intergenic | 30.0% | |
| TTTACTATGAGAGAGAGAAA+TGG | + | chr5.4:68656719-68656738 | MS.gene39855:intron | 30.0% | |
| TTTCAGAACTTACCTCTTAA+GGG | - | chr5.4:68657281-68657300 | None:intergenic | 30.0% | |
| ! | AAATTCTACTGTTGGTGAAT+AGG | - | chr5.4:68655589-68655608 | None:intergenic | 30.0% |
| ! | AGGCTCTGATATTCAAAATT+TGG | - | chr5.4:68654562-68654581 | None:intergenic | 30.0% |
| ! | AGTAAGTTATGTTAGTTTCC+CGG | + | chr5.4:68655956-68655975 | MS.gene39855:intron | 30.0% |
| ! | CAAATCAATGTTTTCTCAAG+AGG | + | chr5.4:68654792-68654811 | MS.gene39855:CDS | 30.0% |
| ! | GATTTTCTGATTCTGATTCT+GGG | + | chr5.4:68656539-68656558 | MS.gene39855:intron | 30.0% |
| ! | TAAACAACTTCCTGATGTTT+TGG | - | chr5.4:68655255-68655274 | None:intergenic | 30.0% |
| ! | TCAACCTTATTTGAAGTGTA+TGG | + | chr5.4:68655650-68655669 | MS.gene39855:intron | 30.0% |
| ! | TCACCAACAGTAGAATTTTA+TGG | + | chr5.4:68655591-68655610 | MS.gene39855:intron | 30.0% |
| ! | TGACATATTGCTTCTAAAGA+AGG | - | chr5.4:68656216-68656235 | None:intergenic | 30.0% |
| ! | TGATTTTCTGATTCTGATTC+TGG | + | chr5.4:68656538-68656557 | MS.gene39855:intron | 30.0% |
| !! | CAAATCTCTGTTAGTTTGTA+AGG | + | chr5.4:68655431-68655450 | MS.gene39855:intron | 30.0% |
| !! | TAGAGCATTGGAAAAATTTG+AGG | + | chr5.4:68657806-68657825 | MS.gene39855:intron | 30.0% |
| !! | TATTAGAGCTTTGTTAACCA+TGG | + | chr5.4:68657956-68657975 | MS.gene39855:CDS | 30.0% |
| !!! | CTTTTCATCATTGGCTTAAT+AGG | - | chr5.4:68656337-68656356 | None:intergenic | 30.0% |
| AATGGAAGGACAATAGAAAG+TGG | + | chr5.4:68656737-68656756 | MS.gene39855:CDS | 35.0% | |
| ACAAGCAACTTCTGATATGA+TGG | + | chr5.4:68656607-68656626 | MS.gene39855:CDS | 35.0% | |
| ACAATGATCCATCAGTAAGT+AGG | - | chr5.4:68657352-68657371 | None:intergenic | 35.0% | |
| ACTACATAACTTTACATGGG+AGG | + | chr5.4:68657985-68658004 | MS.gene39855:CDS | 35.0% | |
| ACTTTACATGGGAGGATTAA+AGG | + | chr5.4:68657993-68658012 | MS.gene39855:CDS | 35.0% | |
| AGATCATTAGGATCATCTCA+GGG | + | chr5.4:68654313-68654332 | MS.gene39855:CDS | 35.0% | |
| AGATGATCCTAATGATCTGT+AGG | - | chr5.4:68654311-68654330 | None:intergenic | 35.0% | |
| AGTGTATAGTAACAAAGAGC+GGG | + | chr5.4:68655877-68655896 | MS.gene39855:CDS | 35.0% | |
| ATCAGGAAGTTGTTTAAGGA+TGG | + | chr5.4:68655259-68655278 | MS.gene39855:intron | 35.0% | |
| ATGGACAATGAATTTGAGGA+TGG | + | chr5.4:68656584-68656603 | MS.gene39855:CDS | 35.0% | |
| ATTGCACTTGCAGTTCATAT+TGG | + | chr5.4:68657207-68657226 | MS.gene39855:intron | 35.0% | |
| ATTTGTCCAATGATCGGAAA+TGG | + | chr5.4:68657151-68657170 | MS.gene39855:intron | 35.0% | |
| CAAAAGTCCTACAGATCATT+AGG | + | chr5.4:68654301-68654320 | MS.gene39855:CDS | 35.0% | |
| CACTCCATACACTTCAAATA+AGG | - | chr5.4:68655657-68655676 | None:intergenic | 35.0% | |
| CATTACATGATGCAATCTAC+AGG | + | chr5.4:68655081-68655100 | MS.gene39855:intron | 35.0% | |
| CTAACTACGAGGATTATTCA+GGG | + | chr5.4:68657558-68657577 | MS.gene39855:intron | 35.0% | |
| CTTACCAACAAAATTGTGCA+CGG | + | chr5.4:68654936-68654955 | MS.gene39855:intron | 35.0% | |
| GATATTCCATTTCCGATCAT+TGG | - | chr5.4:68657160-68657179 | None:intergenic | 35.0% | |
| GGTAAGAGTGAAAAGAAATG+AGG | - | chr5.4:68656315-68656334 | None:intergenic | 35.0% | |
| GTTTCAGAACTTACCTCTTA+AGG | - | chr5.4:68657282-68657301 | None:intergenic | 35.0% | |
| TAACTACGAGGATTATTCAG+GGG | + | chr5.4:68657559-68657578 | MS.gene39855:intron | 35.0% | |
| TCTTCCTGGATCTTCATTTA+TGG | + | chr5.4:68656976-68656995 | MS.gene39855:intron | 35.0% | |
| TGCAATATGGGAAGAGAAAA+AGG | + | chr5.4:68657726-68657745 | MS.gene39855:intron | 35.0% | |
| TGCTTCTACAGACAAAAATG+GGG | - | chr5.4:68657603-68657622 | None:intergenic | 35.0% | |
| TGTGATTTCAGTCCTTTATC+TGG | + | chr5.4:68656690-68656709 | MS.gene39855:intron | 35.0% | |
| TTAAGGATGGCTTCATTATC+AGG | + | chr5.4:68655272-68655291 | MS.gene39855:intron | 35.0% | |
| TTAGTTGTGCTGAGTATTCT+AGG | + | chr5.4:68655537-68655556 | MS.gene39855:intron | 35.0% | |
| ! | ACCTGATTGTTTAGAGTTGA+AGG | + | chr5.4:68657887-68657906 | MS.gene39855:intron | 35.0% |
| ! | AGTGGTTCAATTGATTCACA+TGG | + | chr5.4:68656755-68656774 | MS.gene39855:CDS | 35.0% |
| ! | ATTGTTTAGAGTTGAAGGCT+TGG | + | chr5.4:68657892-68657911 | MS.gene39855:intron | 35.0% |
| ! | CTATTCATTTTCTTTCCTGG+AGG | + | chr5.4:68655129-68655148 | MS.gene39855:intron | 35.0% |
| ! | CTTGTCATTTGTCCAATGAT+CGG | + | chr5.4:68657145-68657164 | MS.gene39855:intron | 35.0% |
| ! | GACGTTGTATTTGACTTCAT+TGG | + | chr5.4:68656148-68656167 | MS.gene39855:CDS | 35.0% |
| ! | GTGCACGGTTTAGTTTATAT+TGG | + | chr5.4:68654951-68654970 | MS.gene39855:intron | 35.0% |
| ! | GTTTCAATTTGGGATGTTAC+TGG | + | chr5.4:68654087-68654106 | MS.gene39855:intron | 35.0% |
| ! | TAAACCGTGCACAATTTTGT+TGG | - | chr5.4:68654943-68654962 | None:intergenic | 35.0% |
| ! | TCTTATTTACAGATGTGTCG+TGG | + | chr5.4:68655806-68655825 | MS.gene39855:intron | 35.0% |
| !! | AGCACTGATAGAAATAGTGA+AGG | - | chr5.4:68656287-68656306 | None:intergenic | 35.0% |
| !! | AGTTGATGATGTTGGTTCTT+TGG | + | chr5.4:68658103-68658122 | MS.gene39855:intron | 35.0% |
| !! | ATCTCTGTTAGTTTGTAAGG+TGG | + | chr5.4:68655434-68655453 | MS.gene39855:intron | 35.0% |
| !! | CTTTTGTTTATGGAATGGCT+AGG | + | chr5.4:68657527-68657546 | MS.gene39855:CDS | 35.0% |
| !! | TGGTATTCAGTTGATGATGT+TGG | + | chr5.4:68658095-68658114 | MS.gene39855:intron | 35.0% |
| !!! | TAGGTTCTCACTTTTTACCA+AGG | - | chr5.4:68654884-68654903 | None:intergenic | 35.0% |
| AAGGGACGTCATTCTAGATA+TGG | + | chr5.4:68655352-68655371 | MS.gene39855:intron | 40.0% | |
| AATGTATCAGAGCTGGAACA+GGG | - | chr5.4:68655165-68655184 | None:intergenic | 40.0% | |
| ACTCTTGAGGTAAGCATCTT+CGG | + | chr5.4:68658193-68658212 | MS.gene39855:intron | 40.0% | |
| ACTTGCAGTTCATATTGGCA+TGG | + | chr5.4:68657212-68657231 | MS.gene39855:intron | 40.0% | |
| AGAGATCTCAGATTTGATCC+GGG | - | chr5.4:68655977-68655996 | None:intergenic | 40.0% | |
| AGATACTTGCCTGATTCTAC+CGG | + | chr5.4:68658540-68658559 | MS.gene39855:CDS | 40.0% | |
| ATCGAGCTGCGATTAAATTC+AGG | + | chr5.4:68654585-68654604 | MS.gene39855:intron | 40.0% | |
| CAGAGATCTCAGATTTGATC+CGG | - | chr5.4:68655978-68655997 | None:intergenic | 40.0% | |
| CAGATCATTAGGATCATCTC+AGG | + | chr5.4:68654312-68654331 | MS.gene39855:CDS | 40.0% | |
| CAGGGGATAAGAATTATCAG+AGG | + | chr5.4:68657576-68657595 | MS.gene39855:intron | 40.0% | |
| CTATGAGAGAGAGAAATGGA+AGG | + | chr5.4:68656723-68656742 | MS.gene39855:intron | 40.0% | |
| GAGGATTAAAGGTAAGTGCT+TGG | + | chr5.4:68658004-68658023 | MS.gene39855:intron | 40.0% | |
| GATAGACTTGCAGTATTTGC+CGG | - | chr5.4:68658562-68658581 | None:intergenic | 40.0% | |
| GATAGGGAGTGAATCTTAGT+TGG | - | chr5.4:68655301-68655320 | None:intergenic | 40.0% | |
| GATCATTAGGATCATCTCAG+GGG | + | chr5.4:68654314-68654333 | MS.gene39855:CDS | 40.0% | |
| GCAAAATCAGGCTCTACTAT+TGG | + | chr5.4:68657244-68657263 | MS.gene39855:CDS | 40.0% | |
| GCCTTCAACTCTAAACAATC+AGG | - | chr5.4:68657891-68657910 | None:intergenic | 40.0% | |
| GCTAACTACGAGGATTATTC+AGG | + | chr5.4:68657557-68657576 | MS.gene39855:intron | 40.0% | |
| GTTGCCATAAATGAAGATCC+AGG | - | chr5.4:68656983-68657002 | None:intergenic | 40.0% | |
| TAATGTATCAGAGCTGGAAC+AGG | - | chr5.4:68655166-68655185 | None:intergenic | 40.0% | |
| TAGCAAACTGTGAAGTGATG+AGG | + | chr5.4:68656238-68656257 | MS.gene39855:intron | 40.0% | |
| TCATTCGTGGAGCAAATTAC+AGG | - | chr5.4:68656448-68656467 | None:intergenic | 40.0% | |
| TCGAGCTGCGATTAAATTCA+GGG | + | chr5.4:68654586-68654605 | MS.gene39855:intron | 40.0% | |
| TCGAGTATAAACCAGTTGGT+TGG | + | chr5.4:68657682-68657701 | MS.gene39855:intron | 40.0% | |
| TCTTGATACATCCAACCAAC+TGG | - | chr5.4:68657696-68657715 | None:intergenic | 40.0% | |
| TGATGCAATCTACAGGATGA+TGG | + | chr5.4:68655088-68655107 | MS.gene39855:intron | 40.0% | |
| TGTTGCAAAATGCCCTACAA+AGG | + | chr5.4:68657100-68657119 | MS.gene39855:CDS | 40.0% | |
| TTATGCAGATATACGGCAGA+TGG | + | chr5.4:68656109-68656128 | MS.gene39855:intron | 40.0% | |
| TTTAATCGCAGCTCGATCAT+AGG | - | chr5.4:68654582-68654601 | None:intergenic | 40.0% | |
| ! | AAATGTTTCTGCAAGCTGTG+CGG | - | chr5.4:68657078-68657097 | None:intergenic | 40.0% |
| ! | AGGTTTGATCTGGCATTTTG+TGG | + | chr5.4:68656187-68656206 | MS.gene39855:intron | 40.0% |
| ! | AGTTATGTAGTTAGCCTCCA+TGG | - | chr5.4:68657976-68657995 | None:intergenic | 40.0% |
| ! | TTTTCTTTCCTGGAGGATGA+TGG | + | chr5.4:68655136-68655155 | MS.gene39855:intron | 40.0% |
| !! | AGAAGAATCAGGTTGACTGT+TGG | + | chr5.4:68658054-68658073 | MS.gene39855:intron | 40.0% |
| !! | AGAGAGAGCATTGTGCAATA+TGG | + | chr5.4:68657713-68657732 | MS.gene39855:intron | 40.0% |
| !! | GAGAGAGCATTGTGCAATAT+GGG | + | chr5.4:68657714-68657733 | MS.gene39855:intron | 40.0% |
| !! | GCATTGATTCTTCCCTTAAG+AGG | + | chr5.4:68657266-68657285 | MS.gene39855:CDS | 40.0% |
| !! | TAGAGCTTTGTTAACCATGG+AGG | + | chr5.4:68657959-68657978 | MS.gene39855:CDS | 40.0% |
| ACTGCACAAATGTGGCAGTT+GGG | + | chr5.4:68654839-68654858 | MS.gene39855:CDS | 45.0% | |
| CAGAGAAGCTAACTCATTCG+TGG | - | chr5.4:68656461-68656480 | None:intergenic | 45.0% | |
| CAGTATTTGCCGGTAGAATC+AGG | - | chr5.4:68658552-68658571 | None:intergenic | 45.0% | |
| CGAGCTGCGATTAAATTCAG+GGG | + | chr5.4:68654587-68654606 | MS.gene39855:intron | 45.0% | |
| CTCTGTTATATCACGGACCA+TGG | - | chr5.4:68655053-68655072 | None:intergenic | 45.0% | |
| CTGAAAGCAGGAACGAAAAG+AGG | - | chr5.4:68657478-68657497 | None:intergenic | 45.0% | |
| GCGATTAAATTCAGGGGAGT+TGG | + | chr5.4:68654593-68654612 | MS.gene39855:intron | 45.0% | |
| GGAGTAACACTGCACAAATG+TGG | + | chr5.4:68654831-68654850 | MS.gene39855:CDS | 45.0% | |
| TCCTGCTTTCAGCTATGAGA+GGG | + | chr5.4:68657486-68657505 | MS.gene39855:CDS | 45.0% | |
| TCTTTGCAGGCCAAAACATC+AGG | + | chr5.4:68655242-68655261 | MS.gene39855:intron | 45.0% | |
| TGATGGCAAGCAGTCAACAA+AGG | + | chr5.4:68656624-68656643 | MS.gene39855:CDS | 45.0% | |
| TGCAGAAGCCTACTTACTGA+TGG | + | chr5.4:68657341-68657360 | MS.gene39855:intron | 45.0% | |
| TGGCAGCAAAGTGCAAAATC+AGG | + | chr5.4:68657232-68657251 | MS.gene39855:CDS | 45.0% | |
| TTAGAAGTCCCACACTACGA+AGG | - | chr5.4:68656044-68656063 | None:intergenic | 45.0% | |
| TTCCTGCTTTCAGCTATGAG+AGG | + | chr5.4:68657485-68657504 | MS.gene39855:CDS | 45.0% | |
| ! | CTTCATCCCAGCTACTTTAG+CGG | - | chr5.4:68655859-68655878 | None:intergenic | 45.0% |
| AACTCTAGCAGGCTCTTTCC+AGG | - | chr5.4:68658158-68658177 | None:intergenic | 50.0% | |
| ACACAGCTCATGTTGCTGCT+AGG | + | chr5.4:68654474-68654493 | MS.gene39855:intron | 50.0% | |
| AGAATGACGTCCCTTCCTCT+TGG | - | chr5.4:68655347-68655366 | None:intergenic | 50.0% | |
| AGAGGGAGTTCGAAGTACAG+AGG | + | chr5.4:68654810-68654829 | MS.gene39855:CDS | 50.0% | |
| AGATCAAACCTCTCCTCAGG+AGG | - | chr5.4:68656178-68656197 | None:intergenic | 50.0% | |
| AGGTTGTGCAGCTAACTACG+AGG | + | chr5.4:68657547-68657566 | MS.gene39855:intron | 50.0% | |
| ATGAAGGAGGCCAAGAGGAA+GGG | + | chr5.4:68655334-68655353 | MS.gene39855:intron | 50.0% | |
| CACTGCACAAATGTGGCAGT+TGG | + | chr5.4:68654838-68654857 | MS.gene39855:CDS | 50.0% | |
| CAGATGCTAGAGAATGAGCC+TGG | + | chr5.4:68658137-68658156 | MS.gene39855:CDS | 50.0% | |
| CATTAGGATCATCTCAGGGG+TGG | + | chr5.4:68654317-68654336 | MS.gene39855:CDS | 50.0% | |
| GCTCGAATGGGTCAATTCCT+TGG | + | chr5.4:68654864-68654883 | MS.gene39855:CDS | 50.0% | |
| GGTGAGCTAAGGGACATTGA+AGG | - | chr5.4:68656011-68656030 | None:intergenic | 50.0% | |
| GTCGACATGATTCTCACACG+TGG | + | chr5.4:68658312-68658331 | MS.gene39855:intron | 50.0% | |
| GTCTGTCGCTACTACTCTTG+AGG | + | chr5.4:68658180-68658199 | MS.gene39855:CDS | 50.0% | |
| TAGCAGCCGCTAAAGTAGCT+GGG | + | chr5.4:68655850-68655869 | MS.gene39855:CDS | 50.0% | |
| TCCCTCTCATAGCTGAAAGC+AGG | - | chr5.4:68657490-68657509 | None:intergenic | 50.0% | |
| TCCTGAGGAGAGGTTTGATC+TGG | + | chr5.4:68656177-68656196 | MS.gene39855:intron | 50.0% | |
| TTACAGATGTGTCGTGGTCG+AGG | + | chr5.4:68655812-68655831 | MS.gene39855:intron | 50.0% | |
| TTATATCACGGACCATGGCG+CGG | - | chr5.4:68655048-68655067 | None:intergenic | 50.0% | |
| TTCACTCCCTATCCTGTGCT+AGG | + | chr5.4:68655308-68655327 | MS.gene39855:intron | 50.0% | |
| TTTAAATTGTGGCCGCGCCA+TGG | + | chr5.4:68655033-68655052 | MS.gene39855:intron | 50.0% | |
| ! | CTTCATTGGTGATCCTCCTG+AGG | + | chr5.4:68656162-68656181 | MS.gene39855:CDS | 50.0% |
| ! | TTTGGTGGCTCTCTCTTTGC+AGG | + | chr5.4:68655229-68655248 | MS.gene39855:intron | 50.0% |
| AGGATCATCTCAGGGGTGGA+CGG | + | chr5.4:68654321-68654340 | MS.gene39855:CDS | 55.0% | |
| ATCCTGTGCTAGGCGCATGA+AGG | + | chr5.4:68655318-68655337 | MS.gene39855:intron | 55.0% | |
| CAGGGTAACCATCATCCTCC+AGG | - | chr5.4:68655147-68655166 | None:intergenic | 55.0% | |
| CATGAAGGAGGCCAAGAGGA+AGG | + | chr5.4:68655333-68655352 | MS.gene39855:intron | 55.0% | |
| CATGCGCCTAGCACAGGATA+GGG | - | chr5.4:68655317-68655336 | None:intergenic | 55.0% | |
| CTAGCAGCCGCTAAAGTAGC+TGG | + | chr5.4:68655849-68655868 | MS.gene39855:CDS | 55.0% | |
| GCCAGATCAAACCTCTCCTC+AGG | - | chr5.4:68656181-68656200 | None:intergenic | 55.0% | |
| GCGACAGACGAAACTCTAGC+AGG | - | chr5.4:68658169-68658188 | None:intergenic | 55.0% | |
| GGCAGTTGGGAAGCTCGAAT+GGG | + | chr5.4:68654852-68654871 | MS.gene39855:CDS | 55.0% | |
| TCATGCGCCTAGCACAGGAT+AGG | - | chr5.4:68655318-68655337 | None:intergenic | 55.0% | |
| TGGCAGTTGGGAAGCTCGAA+TGG | + | chr5.4:68654851-68654870 | MS.gene39855:CDS | 55.0% | |
| ! | TTGGTGATCCTCCTGAGGAG+AGG | + | chr5.4:68656167-68656186 | MS.gene39855:CDS | 55.0% |
| !! | CAGCTCGGTTGGTGAGCTAA+GGG | - | chr5.4:68656021-68656040 | None:intergenic | 55.0% |
| ACCGAGCTGCCTTCGTAGTG+TGG | + | chr5.4:68656032-68656051 | MS.gene39855:intron | 60.0% | |
| CACTACGAAGGCAGCTCGGT+TGG | - | chr5.4:68656032-68656051 | None:intergenic | 60.0% | |
| CCCACACTACGAAGGCAGCT+CGG | - | chr5.4:68656036-68656055 | None:intergenic | 60.0% | |
| CCGAGCTGCCTTCGTAGTGT+GGG | + | chr5.4:68656033-68656052 | MS.gene39855:intron | 60.0% | |
| CTCCTTCATGCGCCTAGCAC+AGG | - | chr5.4:68655323-68655342 | None:intergenic | 60.0% | |
| CTGTGCTAGGCGCATGAAGG+AGG | + | chr5.4:68655321-68655340 | MS.gene39855:intron | 60.0% | |
| GTGGTCGAGGACAGCGCTAT+AGG | + | chr5.4:68655825-68655844 | MS.gene39855:CDS | 60.0% | |
| !! | GCAGCTCGGTTGGTGAGCTA+AGG | - | chr5.4:68656022-68656041 | None:intergenic | 60.0% |
| GGCGCATGAAGGAGGCCAAG+AGG | + | chr5.4:68655329-68655348 | MS.gene39855:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 68654079 | 68658697 | 68654079 | ID=MS.gene39855 |
| chr5.4 | mRNA | 68654079 | 68658697 | 68654079 | ID=MS.gene39855.t1;Parent=MS.gene39855 |
| chr5.4 | exon | 68654079 | 68654082 | 68654079 | ID=MS.gene39855.t1.exon1;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68654079 | 68654082 | 68654079 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68654293 | 68654342 | 68654293 | ID=MS.gene39855.t1.exon2;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68654293 | 68654342 | 68654293 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68654747 | 68654892 | 68654747 | ID=MS.gene39855.t1.exon3;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68654747 | 68654892 | 68654747 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68655818 | 68655898 | 68655818 | ID=MS.gene39855.t1.exon4;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68655818 | 68655898 | 68655818 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68656117 | 68656188 | 68656117 | ID=MS.gene39855.t1.exon5;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68656117 | 68656188 | 68656117 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68656408 | 68656447 | 68656408 | ID=MS.gene39855.t1.exon6;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68656408 | 68656447 | 68656408 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68656584 | 68656645 | 68656584 | ID=MS.gene39855.t1.exon7;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68656584 | 68656645 | 68656584 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68656730 | 68656776 | 68656730 | ID=MS.gene39855.t1.exon8;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68656730 | 68656776 | 68656730 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68657054 | 68657121 | 68657054 | ID=MS.gene39855.t1.exon9;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68657054 | 68657121 | 68657054 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68657220 | 68657287 | 68657220 | ID=MS.gene39855.t1.exon10;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68657220 | 68657287 | 68657220 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68657463 | 68657548 | 68657463 | ID=MS.gene39855.t1.exon11;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68657463 | 68657548 | 68657463 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68657931 | 68658014 | 68657931 | ID=MS.gene39855.t1.exon12;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68657931 | 68658014 | 68657931 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68658105 | 68658201 | 68658105 | ID=MS.gene39855.t1.exon13;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68658105 | 68658201 | 68658105 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68658528 | 68658597 | 68658528 | ID=MS.gene39855.t1.exon14;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68658528 | 68658597 | 68658528 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| chr5.4 | exon | 68658689 | 68658697 | 68658689 | ID=MS.gene39855.t1.exon15;Parent=MS.gene39855.t1 |
| chr5.4 | CDS | 68658689 | 68658697 | 68658689 | ID=cds.MS.gene39855.t1;Parent=MS.gene39855.t1 |
| Gene Sequence |
| Protein sequence |
