Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057452.t1 | XP_013447567.1 | 82.8 | 58 | 9 | 1 | 22 | 79 | 563 | 619 | 3.80E-08 | 67.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057452.t1 | A0A072TWR4 | 82.8 | 58 | 9 | 1 | 22 | 79 | 563 | 619 | 2.8e-08 | 67.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene057452 | -0.839612 | 1.43E-57 | -1.69E-46 |
| MS.gene04917 | MS.gene057452 | -0.831959 | 1.24E-55 | -1.69E-46 |
| MS.gene050114 | MS.gene057452 | -0.848481 | 5.96E-60 | -1.69E-46 |
| MS.gene050288 | MS.gene057452 | -0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene051245 | MS.gene057452 | -0.839838 | 1.25E-57 | -1.69E-46 |
| MS.gene051748 | MS.gene057452 | -0.801747 | 7.78E-49 | -1.69E-46 |
| MS.gene051756 | MS.gene057452 | -0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene057452 | 0.815244 | 1.02E-51 | -1.69E-46 |
| MS.gene056752 | MS.gene057452 | -0.857956 | 1.15E-62 | -1.69E-46 |
| MS.gene056849 | MS.gene057452 | -0.837772 | 4.27E-57 | -1.69E-46 |
| MS.gene057451 | MS.gene057452 | 0.943321 | 1.49E-102 | -1.69E-46 |
| MS.gene057452 | MS.gene057999 | -0.816802 | 4.58E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene058182 | -0.816944 | 4.26E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene058238 | -0.814778 | 1.30E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene058661 | 0.838723 | 2.43E-57 | -1.69E-46 |
| MS.gene057452 | MS.gene059719 | -0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene059872 | 0.829027 | 6.47E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene060084 | -0.818961 | 1.49E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene060297 | -0.838189 | 3.33E-57 | -1.69E-46 |
| MS.gene057452 | MS.gene060563 | -0.806806 | 6.88E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene060869 | -0.83656 | 8.71E-57 | -1.69E-46 |
| MS.gene057452 | MS.gene061004 | -0.809546 | 1.79E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene06131 | -0.826063 | 3.33E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene061958 | -0.811503 | 6.78E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene06503 | -0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene066426 | -0.805279 | 1.44E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene067219 | -0.81301 | 3.18E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene068683 | 0.836375 | 9.71E-57 | -1.69E-46 |
| MS.gene057452 | MS.gene069225 | -0.826352 | 2.84E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene069571 | 0.858893 | 6.03E-63 | -1.69E-46 |
| MS.gene057452 | MS.gene070011 | -0.801627 | 8.24E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene070222 | -0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene07088 | -0.829021 | 6.50E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene07101 | -0.815331 | 9.77E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene072057 | -0.82488 | 6.35E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene072285 | 0.809452 | 1.88E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene072386 | -0.848091 | 7.65E-60 | -1.69E-46 |
| MS.gene057452 | MS.gene072424 | -0.815642 | 8.33E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene072564 | -0.825318 | 5.00E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene072565 | -0.824429 | 8.11E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene072732 | -0.804616 | 1.98E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene072969 | -0.851879 | 6.66E-61 | -1.69E-46 |
| MS.gene057452 | MS.gene072970 | -0.830847 | 2.33E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene07339 | -0.810614 | 1.06E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene073564 | -0.846892 | 1.63E-59 | -1.69E-46 |
| MS.gene057452 | MS.gene073780 | -0.803301 | 3.72E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene074000 | -0.818341 | 2.06E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene07404 | -0.832036 | 1.19E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene07575 | 0.813461 | 2.53E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene08889 | -0.834922 | 2.26E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene08894 | -0.820026 | 8.52E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene09032 | -0.830272 | 3.22E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene20407 | 0.864489 | 1.17E-64 | -1.69E-46 |
| MS.gene057452 | MS.gene21659 | -0.808268 | 3.37E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene22314 | -0.821764 | 3.39E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene22545 | -0.827282 | 1.71E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene23484 | -0.824871 | 6.38E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene23961 | -0.849645 | 2.83E-60 | -1.69E-46 |
| MS.gene057452 | MS.gene24227 | -0.83322 | 6.04E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene25015 | -0.801999 | 6.91E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene25942 | -0.80507 | 1.59E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene26267 | -0.811136 | 8.14E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene26717 | -0.806471 | 8.10E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene26740 | -0.809182 | 2.15E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene26743 | -0.803386 | 3.57E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene27228 | -0.832357 | 9.90E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene28621 | -0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene28684 | -0.810045 | 1.40E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene29047 | -0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene057452 | MS.gene29053 | 0.823487 | 1.35E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene29109 | -0.825874 | 3.70E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene30668 | -0.830622 | 2.65E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene30792 | 0.898988 | 3.09E-77 | -1.69E-46 |
| MS.gene057452 | MS.gene33183 | -0.818337 | 2.07E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene34314 | 0.802034 | 6.80E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene34317 | 0.807427 | 5.08E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene34907 | -0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene35211 | -0.822165 | 2.74E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene36124 | -0.830513 | 2.81E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene36147 | -0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene36482 | -0.835684 | 1.45E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene36627 | -0.821613 | 3.68E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene37238 | -0.819912 | 9.05E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene37434 | 0.833963 | 3.94E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene37653 | -0.859252 | 4.70E-63 | -1.69E-46 |
| MS.gene057452 | MS.gene37990 | -0.800043 | 1.73E-48 | -1.69E-46 |
| MS.gene057452 | MS.gene38070 | -0.842604 | 2.34E-58 | -1.69E-46 |
| MS.gene057452 | MS.gene38786 | -0.825774 | 3.90E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene39139 | -0.808726 | 2.69E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene39313 | -0.839385 | 1.64E-57 | -1.69E-46 |
| MS.gene057452 | MS.gene39317 | -0.833087 | 6.52E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene39855 | -0.80811 | 3.64E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene40028 | -0.823971 | 1.04E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene40917 | 0.827367 | 1.63E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene41775 | -0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene41867 | -0.802793 | 4.74E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene42767 | -0.816856 | 4.46E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene43113 | -0.813981 | 1.94E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene43862 | -0.802178 | 6.35E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene44260 | -0.824586 | 7.45E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene45785 | -0.812478 | 4.15E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene46355 | -0.812726 | 3.67E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene46922 | -0.819688 | 1.02E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene48393 | 0.867176 | 1.66E-65 | -1.69E-46 |
| MS.gene057452 | MS.gene49777 | -0.834267 | 3.31E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene50005 | -0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene50641 | -0.81257 | 3.97E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene51515 | -0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene51557 | -0.816424 | 5.57E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene51920 | -0.840905 | 6.56E-58 | -1.69E-46 |
| MS.gene057452 | MS.gene52153 | -0.823315 | 1.48E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene52281 | -0.813666 | 2.28E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene52610 | -0.8089 | 2.47E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene52973 | -0.836519 | 8.93E-57 | -1.69E-46 |
| MS.gene057452 | MS.gene54353 | -0.818381 | 2.02E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene54356 | -0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene54547 | -0.807886 | 4.06E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene55062 | -0.829312 | 5.52E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene55544 | -0.84655 | 2.02E-59 | -1.69E-46 |
| MS.gene057452 | MS.gene56493 | -0.821619 | 3.67E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene56931 | 0.853335 | 2.56E-61 | -1.69E-46 |
| MS.gene057452 | MS.gene58616 | -0.856422 | 3.25E-62 | -1.69E-46 |
| MS.gene057452 | MS.gene59358 | -0.801483 | 8.81E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene60265 | -0.822157 | 2.75E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene60300 | -0.833108 | 6.44E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene60359 | -0.803142 | 4.01E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene60372 | -0.819253 | 1.28E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene61001 | -0.818675 | 1.73E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene62956 | -0.800404 | 1.46E-48 | -1.69E-46 |
| MS.gene057452 | MS.gene63281 | -0.834051 | 3.75E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene64170 | -0.807561 | 4.76E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene65412 | -0.811129 | 8.17E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene66408 | -0.819335 | 1.23E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene67107 | -0.823836 | 1.12E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene67141 | -0.810113 | 1.35E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene67269 | -0.850076 | 2.14E-60 | -1.69E-46 |
| MS.gene057452 | MS.gene68171 | -0.825313 | 5.02E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene69097 | -0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene69314 | -0.808807 | 2.58E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene70314 | -0.82864 | 8.03E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene70325 | -0.816456 | 5.48E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene70530 | -0.833051 | 6.66E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene70596 | -0.812826 | 3.49E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene71547 | -0.811348 | 7.32E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene72312 | -0.823079 | 1.68E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene73748 | -0.828149 | 1.06E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene73925 | -0.812378 | 4.37E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene74407 | -0.852324 | 4.97E-61 | -1.69E-46 |
| MS.gene057452 | MS.gene74854 | -0.809222 | 2.11E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene74919 | -0.80961 | 1.74E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene76046 | -0.808515 | 2.98E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene76440 | -0.827712 | 1.34E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene76478 | -0.843143 | 1.68E-58 | -1.69E-46 |
| MS.gene057452 | MS.gene78314 | -0.812918 | 3.33E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene79605 | -0.803228 | 3.85E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene79862 | -0.825982 | 3.48E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene80182 | 0.804687 | 1.92E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene81715 | -0.847291 | 1.27E-59 | -1.69E-46 |
| MS.gene057452 | MS.gene81946 | -0.807786 | 4.26E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene82350 | -0.838117 | 3.48E-57 | -1.69E-46 |
| MS.gene057452 | MS.gene82352 | -0.832439 | 9.45E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene82354 | -0.8206 | 6.30E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene82624 | -0.857179 | 1.95E-62 | -1.69E-46 |
| MS.gene057452 | MS.gene82976 | -0.835502 | 1.62E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene82978 | -0.820919 | 5.32E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene82983 | -0.824818 | 6.57E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene82992 | -0.802578 | 5.25E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene83187 | -0.802422 | 5.65E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene83188 | -0.818318 | 2.09E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene86061 | -0.83575 | 1.40E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene86392 | -0.805862 | 1.09E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene86937 | -0.801371 | 9.29E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene87924 | -0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene87972 | -0.834747 | 2.51E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene88427 | -0.806705 | 7.23E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene88733 | -0.812961 | 3.26E-51 | -1.69E-46 |
| MS.gene057452 | MS.gene88859 | -0.821631 | 3.64E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene88976 | -0.875866 | 2.20E-68 | -1.69E-46 |
| MS.gene057452 | MS.gene89027 | -0.800672 | 1.29E-48 | -1.69E-46 |
| MS.gene057452 | MS.gene89663 | -0.807846 | 4.14E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene89677 | -0.808324 | 3.28E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene90003 | -0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene90077 | -0.807446 | 5.03E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene90442 | -0.827404 | 1.59E-54 | -1.69E-46 |
| MS.gene057452 | MS.gene90965 | -0.853278 | 2.66E-61 | -1.69E-46 |
| MS.gene057452 | MS.gene91524 | -0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene91625 | 0.828368 | 9.35E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene92070 | 0.818312 | 2.09E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene92572 | -0.816515 | 5.32E-52 | -1.69E-46 |
| MS.gene057452 | MS.gene93983 | -0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene057452 | MS.gene95280 | 0.808547 | 2.93E-50 | -1.69E-46 |
| MS.gene057452 | MS.gene95469 | -0.832428 | 9.51E-56 | -1.69E-46 |
| MS.gene057452 | MS.gene97411 | -0.805919 | 1.06E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene98791 | 0.803809 | 2.92E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene99313 | -0.80492 | 1.71E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene99465 | -0.806958 | 6.39E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057452.t1 | MTR_7g013700 | 82.812 | 64 | 10 | 1 | 18 | 81 | 559 | 621 | 4.28e-20 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 23 sgRNAs with CRISPR-Local
Find 37 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGGCTCAAAAGCCTTTC+TGG | 0.117481 | 7.2:+83661192 | MS.gene057452:CDS |
| CCTTGCCCCACCCAAGCAAT+TGG | 0.244168 | 7.2:+83661174 | MS.gene057452:CDS |
| TCAGTTGAATCATAAAATTT+AGG | 0.266358 | 7.2:-83660812 | None:intergenic |
| AATTTAGGTGGAGGAGGTGG+TGG | 0.310202 | 7.2:-83660797 | None:intergenic |
| AGATACTTTAGTCAAGCTAA+TGG | 0.358969 | 7.2:+83661092 | MS.gene057452:intron |
| CTTGCCCCACCCAAGCAATT+GGG | 0.378546 | 7.2:+83661175 | MS.gene057452:CDS |
| TTAGTCAAGCTAATGGAATA+TGG | 0.379441 | 7.2:+83661099 | MS.gene057452:CDS |
| TTGGGCTCAAAAGCCTTTCT+GGG | 0.382975 | 7.2:+83661193 | MS.gene057452:CDS |
| ACAAAATCTGATGCAGTTCC+TGG | 0.384698 | 7.2:+83660872 | MS.gene057452:CDS |
| AAGACAAGAGCAATAGTTTA+CGG | 0.386481 | 7.2:+83660846 | MS.gene057452:CDS |
| TTAGGTGGAGGAGGTGGTGG+GGG | 0.386881 | 7.2:-83660794 | None:intergenic |
| TTTAGGTGGAGGAGGTGGTG+GGG | 0.401933 | 7.2:-83660795 | None:intergenic |
| TTGAGCCCAATTGCTTGGGT+GGG | 0.419719 | 7.2:-83661180 | None:intergenic |
| TTTGAGCCCAATTGCTTGGG+TGG | 0.431489 | 7.2:-83661181 | None:intergenic |
| TGAGCCCAATTGCTTGGGTG+GGG | 0.436460 | 7.2:-83661179 | None:intergenic |
| CCAATTGCTTGGGTGGGGCA+AGG | 0.495513 | 7.2:-83661174 | None:intergenic |
| ATTTAGGTGGAGGAGGTGGT+GGG | 0.510960 | 7.2:-83660796 | None:intergenic |
| TAAAATTTAGGTGGAGGAGG+TGG | 0.516302 | 7.2:-83660800 | None:intergenic |
| TCATAAAATTTAGGTGGAGG+AGG | 0.523877 | 7.2:-83660803 | None:intergenic |
| GAATCATAAAATTTAGGTGG+AGG | 0.526336 | 7.2:-83660806 | None:intergenic |
| GTTGAATCATAAAATTTAGG+TGG | 0.536412 | 7.2:-83660809 | None:intergenic |
| ACAGATCATAAAGCCCAGAA+AGG | 0.597506 | 7.2:-83661206 | None:intergenic |
| ATTGCTTGGGTGGGGCAAGG+AGG | 0.609227 | 7.2:-83661171 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAGTTGAATCATAAAATTT+AGG | - | chr7.2:83660815-83660834 | None:intergenic | 20.0% |
| !!! | TTAGATTTGTTTGTAACTTT+AGG | + | chr7.2:83661059-83661078 | MS.gene057452:intron | 20.0% |
| ! | AGCATTACAAAGTCAATTAA+AGG | - | chr7.2:83661021-83661040 | None:intergenic | 25.0% |
| ! | GCATTACAAAGTCAATTAAA+GGG | - | chr7.2:83661020-83661039 | None:intergenic | 25.0% |
| ! | GTTGAATCATAAAATTTAGG+TGG | - | chr7.2:83660812-83660831 | None:intergenic | 25.0% |
| AAGACAAGAGCAATAGTTTA+CGG | + | chr7.2:83660846-83660865 | MS.gene057452:CDS | 30.0% | |
| AGATACTTTAGTCAAGCTAA+TGG | + | chr7.2:83661092-83661111 | MS.gene057452:intron | 30.0% | |
| GAATCATAAAATTTAGGTGG+AGG | - | chr7.2:83660809-83660828 | None:intergenic | 30.0% | |
| TTAGTCAAGCTAATGGAATA+TGG | + | chr7.2:83661099-83661118 | MS.gene057452:CDS | 30.0% | |
| AAGCAAGTTTAATGCTAACC+AGG | - | chr7.2:83660893-83660912 | None:intergenic | 35.0% | |
| TCATAAAATTTAGGTGGAGG+AGG | - | chr7.2:83660806-83660825 | None:intergenic | 35.0% | |
| ACAAAATCTGATGCAGTTCC+TGG | + | chr7.2:83660872-83660891 | MS.gene057452:CDS | 40.0% | |
| ACAGATCATAAAGCCCAGAA+AGG | - | chr7.2:83661209-83661228 | None:intergenic | 40.0% | |
| TAAAATTTAGGTGGAGGAGG+TGG | - | chr7.2:83660803-83660822 | None:intergenic | 40.0% | |
| !! | TTACCGTCTGCTTTTAAGTG+TGG | + | chr7.2:83660994-83661013 | MS.gene057452:intron | 40.0% |
| ATTGGGCTCAAAAGCCTTTC+TGG | + | chr7.2:83661192-83661211 | MS.gene057452:CDS | 45.0% | |
| TTGGGCTCAAAAGCCTTTCT+GGG | + | chr7.2:83661193-83661212 | MS.gene057452:CDS | 45.0% | |
| ! | GCTTTTGAGCCCAATTGCTT+GGG | - | chr7.2:83661187-83661206 | None:intergenic | 45.0% |
| !! | ATAGCTCTTTTTGGAGGAGG+TGG | - | chr7.2:83660773-83660792 | None:intergenic | 45.0% |
| AATTTAGGTGGAGGAGGTGG+TGG | - | chr7.2:83660800-83660819 | None:intergenic | 50.0% | |
| ATTTAGGTGGAGGAGGTGGT+GGG | - | chr7.2:83660799-83660818 | None:intergenic | 50.0% | |
| GGGCCACACTTAAAAGCAGA+CGG | - | chr7.2:83661000-83661019 | None:intergenic | 50.0% | |
| TTGAGCCCAATTGCTTGGGT+GGG | - | chr7.2:83661183-83661202 | None:intergenic | 50.0% | |
| TTTGAGCCCAATTGCTTGGG+TGG | - | chr7.2:83661184-83661203 | None:intergenic | 50.0% | |
| ! | GGCTTTTGAGCCCAATTGCT+TGG | - | chr7.2:83661188-83661207 | None:intergenic | 50.0% |
| !! | GGCATAGCTCTTTTTGGAGG+AGG | - | chr7.2:83660776-83660795 | None:intergenic | 50.0% |
| CTTGCCCCACCCAAGCAATT+GGG | + | chr7.2:83661175-83661194 | MS.gene057452:CDS | 55.0% | |
| TGAGCCCAATTGCTTGGGTG+GGG | - | chr7.2:83661182-83661201 | None:intergenic | 55.0% | |
| TTTAGGTGGAGGAGGTGGTG+GGG | - | chr7.2:83660798-83660817 | None:intergenic | 55.0% | |
| !! | CTTTTTGGAGGAGGTGGTGG+AGG | - | chr7.2:83660767-83660786 | None:intergenic | 55.0% |
| !! | GCTCTTTTTGGAGGAGGTGG+TGG | - | chr7.2:83660770-83660789 | None:intergenic | 55.0% |
| !! | GGGGGCATAGCTCTTTTTGG+AGG | - | chr7.2:83660779-83660798 | None:intergenic | 55.0% |
| !! | GGTGGGGGCATAGCTCTTTT+TGG | - | chr7.2:83660782-83660801 | None:intergenic | 55.0% |
| ATTGCTTGGGTGGGGCAAGG+AGG | - | chr7.2:83661174-83661193 | None:intergenic | 60.0% | |
| CCAATTGCTTGGGTGGGGCA+AGG | - | chr7.2:83661177-83661196 | None:intergenic | 60.0% | |
| CCTTGCCCCACCCAAGCAAT+TGG | + | chr7.2:83661174-83661193 | MS.gene057452:CDS | 60.0% | |
| ! | TTAGGTGGAGGAGGTGGTGG+GGG | - | chr7.2:83660797-83660816 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 83660761 | 83661230 | 83660761 | ID=MS.gene057452 |
| chr7.2 | mRNA | 83660761 | 83661230 | 83660761 | ID=MS.gene057452.t1;Parent=MS.gene057452 |
| chr7.2 | exon | 83660761 | 83660893 | 83660761 | ID=MS.gene057452.t1.exon1;Parent=MS.gene057452.t1 |
| chr7.2 | CDS | 83660761 | 83660893 | 83660761 | ID=cds.MS.gene057452.t1;Parent=MS.gene057452.t1 |
| chr7.2 | exon | 83661094 | 83661230 | 83661094 | ID=MS.gene057452.t1.exon2;Parent=MS.gene057452.t1 |
| chr7.2 | CDS | 83661094 | 83661230 | 83661094 | ID=cds.MS.gene057452.t1;Parent=MS.gene057452.t1 |
| Gene Sequence |
| Protein sequence |
