Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39968.t1 | XP_024627930.1 | 68.8 | 442 | 117 | 3 | 1 | 435 | 1 | 428 | 8.10E-140 | 507.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39968.t1 | A0A396I0R2 | 63.8 | 506 | 129 | 5 | 1 | 495 | 1 | 463 | 2.4e-125 | 458.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056356 | MS.gene39968 | 0.813808 | 2.12E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39968.t1 | MTR_2g020090 | 71.852 | 135 | 37 | 1 | 352 | 486 | 49 | 182 | 9.75e-60 | 196 |
| MS.gene39968.t1 | MTR_3g058800 | 76.667 | 120 | 27 | 1 | 367 | 486 | 10 | 128 | 2.04e-56 | 186 |
| MS.gene39968.t1 | MTR_4g023110 | 74.590 | 122 | 30 | 1 | 365 | 486 | 7 | 127 | 1.11e-55 | 182 |
| MS.gene39968.t1 | MTR_4g017750 | 78.462 | 130 | 28 | 0 | 366 | 495 | 110 | 239 | 2.91e-55 | 186 |
| MS.gene39968.t1 | MTR_0029s0140 | 79.528 | 127 | 26 | 0 | 365 | 491 | 241 | 367 | 3.55e-53 | 184 |
| MS.gene39968.t1 | MTR_0029s0140 | 82.051 | 78 | 14 | 0 | 157 | 234 | 162 | 239 | 3.91e-41 | 152 |
| MS.gene39968.t1 | MTR_1g023240 | 72.222 | 144 | 34 | 1 | 348 | 491 | 17 | 154 | 1.71e-52 | 179 |
| MS.gene39968.t1 | MTR_5g080310 | 78.400 | 125 | 27 | 0 | 367 | 491 | 122 | 246 | 1.82e-52 | 179 |
| MS.gene39968.t1 | MTR_2g102860 | 78.151 | 119 | 26 | 0 | 373 | 491 | 13 | 131 | 8.32e-51 | 171 |
| MS.gene39968.t1 | MTR_6g463490 | 78.351 | 97 | 21 | 0 | 395 | 491 | 3 | 99 | 1.77e-46 | 158 |
| MS.gene39968.t1 | MTR_8g027455 | 58.197 | 122 | 49 | 2 | 365 | 485 | 23 | 143 | 3.21e-38 | 145 |
| MS.gene39968.t1 | MTR_1g077650 | 62.500 | 104 | 38 | 1 | 366 | 469 | 46 | 148 | 7.10e-37 | 134 |
| MS.gene39968.t1 | MTR_7g035425 | 37.576 | 165 | 88 | 5 | 173 | 325 | 179 | 340 | 2.67e-24 | 103 |
| MS.gene39968.t1 | MTR_7g037680 | 27.982 | 218 | 107 | 6 | 278 | 485 | 17 | 194 | 2.95e-18 | 84.7 |
| MS.gene39968.t1 | MTR_2g077640 | 28.111 | 217 | 112 | 7 | 235 | 447 | 34 | 210 | 2.05e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 158 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCTGGTTTAGGCTCTTTC+AGG | 0.183435 | 1.4:-58933058 | MS.gene39968:intron |
| CATGATTGAGGGTTAGTCTT+AGG | 0.184506 | 1.4:+58931123 | None:intergenic |
| GGGATTTGTTGTTGGGAAAA+AGG | 0.249414 | 1.4:+58933456 | None:intergenic |
| CTGGCGCCAGCTGAGGCTGC+TGG | 0.269654 | 1.4:+58931087 | None:intergenic |
| TGATGAATTGGTTAAGTATT+GGG | 0.285226 | 1.4:-58932794 | MS.gene39968:CDS |
| CCCGCCTATCTTTGATGAAT+TGG | 0.292649 | 1.4:-58932806 | MS.gene39968:CDS |
| TATGGCACCATACCTCCTTA+TGG | 0.295998 | 1.4:-58933573 | MS.gene39968:CDS |
| TTGCCCTTGCTCTTTCCATT+AGG | 0.302043 | 1.4:+58933804 | None:intergenic |
| ATAACTGCTATCATCACTTT+TGG | 0.303053 | 1.4:-58933116 | MS.gene39968:CDS |
| TTGCTCTTTCCATTAGGTTT+CGG | 0.328125 | 1.4:+58933810 | None:intergenic |
| TTGTTGTGGAGGGATTTGTT+GGG | 0.339007 | 1.4:+58933485 | None:intergenic |
| TAATGCAGACCAAGTGTTCT+TGG | 0.346146 | 1.4:-58932954 | MS.gene39968:intron |
| CCGGTTCTTCTTTGCTTTGT+CGG | 0.346522 | 1.4:+58932747 | None:intergenic |
| GGAGGGATTTGTTGGGGAAG+GGG | 0.347586 | 1.4:+58933492 | None:intergenic |
| CCAGTACATCCTGGATATTA+TGG | 0.365206 | 1.4:-58933591 | MS.gene39968:CDS |
| TTTGTTGTGGAGGGATTTGT+TGG | 0.368070 | 1.4:+58933484 | None:intergenic |
| TGTGGGAGGGACCTTGAGCC+TGG | 0.375892 | 1.4:+58930932 | None:intergenic |
| TCTTCTAGCCAGGGATCACC+TGG | 0.378638 | 1.4:-58933681 | MS.gene39968:CDS |
| CGAGAATCTCTCGGATAATC+CGG | 0.382446 | 1.4:+58933294 | None:intergenic |
| ATGATTGAGGGTTAGTCTTA+GGG | 0.390145 | 1.4:+58931124 | None:intergenic |
| TTGTGGAGGGATTTGTTGTT+GGG | 0.391855 | 1.4:+58933449 | None:intergenic |
| TTGTCTCCTCAAACCGCATA+CGG | 0.400455 | 1.4:+58932851 | None:intergenic |
| GTCCTCCCAGCAGCCTCAGC+TGG | 0.405008 | 1.4:-58931093 | MS.gene39968:CDS |
| ATCTGCTGCATCTTCTAGCC+AGG | 0.410992 | 1.4:-58933691 | MS.gene39968:CDS |
| GAAGAACCGGGCGTCGGAAA+AGG | 0.413034 | 1.4:-58932734 | MS.gene39968:CDS |
| GCTATACGGTCTTGGTAACT+TGG | 0.413255 | 1.4:-58931180 | MS.gene39968:CDS |
| TTGATGAATTGGTTAAGTAT+TGG | 0.416006 | 1.4:-58932795 | MS.gene39968:CDS |
| GATTGCTTCAGCAGCCGGTT+TGG | 0.416531 | 1.4:+58933152 | None:intergenic |
| TGTTGTTGTTGGGGTTGTGG+TGG | 0.418549 | 1.4:+58933393 | None:intergenic |
| TGAATATGGTGGTAAATGAT+AGG | 0.419203 | 1.4:+58933533 | None:intergenic |
| TGAATAAGCTCTCGCATCTC+TGG | 0.419643 | 1.4:+58931068 | None:intergenic |
| GTGGAGGGATTTGTTGGGGA+AGG | 0.419957 | 1.4:+58933490 | None:intergenic |
| GTTGTTGTTGGGGTTGTGGT+GGG | 0.422252 | 1.4:+58933394 | None:intergenic |
| CCGACAAAGCAAAGAAGAAC+CGG | 0.424122 | 1.4:-58932747 | MS.gene39968:CDS |
| ATGGCACCATACCTCCTTAT+GGG | 0.425132 | 1.4:-58933572 | MS.gene39968:CDS |
| TGGCGCCAGCTGAGGCTGCT+GGG | 0.425737 | 1.4:+58931088 | None:intergenic |
| CAGGAGCAGCTACACTAGCC+TGG | 0.433549 | 1.4:+58933652 | None:intergenic |
| AGGAGCAGCTGGCTCAGTTT+AGG | 0.434219 | 1.4:-58930959 | MS.gene39968:CDS |
| GTTGTGGAGGGATTTGTTGT+TGG | 0.434305 | 1.4:+58933448 | None:intergenic |
| AATGCAGACCAAGTGTTCTT+GGG | 0.435174 | 1.4:-58932953 | MS.gene39968:intron |
| CGCATCTCTGGCGCCAGCTG+AGG | 0.435501 | 1.4:+58931080 | None:intergenic |
| TGGAGGGATTTGTTGGGGAA+GGG | 0.440672 | 1.4:+58933491 | None:intergenic |
| GGAATGCCTCCGAAACCTAA+TGG | 0.442258 | 1.4:-58933819 | MS.gene39968:CDS |
| CTCGTCGTCGATTCATCTTA+AGG | 0.445948 | 1.4:-58933275 | MS.gene39968:CDS |
| TTTCTTGTTGGGGCTGTGGT+GGG | 0.448866 | 1.4:+58933367 | None:intergenic |
| AAGAAGAAGGGAAAGCTATA+CGG | 0.450481 | 1.4:-58931194 | MS.gene39968:CDS |
| TTAACCAATTCATCAAAGAT+AGG | 0.456166 | 1.4:+58932802 | None:intergenic |
| CCATAATATCCAGGATGTAC+TGG | 0.458343 | 1.4:+58933591 | None:intergenic |
| GATCTGATTGCTTCAGCAGC+CGG | 0.463673 | 1.4:+58933147 | None:intergenic |
| TGGCTCAGTTTAGGCAAGCC+AGG | 0.464149 | 1.4:-58930950 | MS.gene39968:CDS |
| GGATTTGTTGGGGAAGGGGA+AGG | 0.465106 | 1.4:+58933496 | None:intergenic |
| GGGAGGACCCAGGTGATCCC+TGG | 0.467266 | 1.4:+58933673 | None:intergenic |
| AGGACCCTTCACCATGATTG+AGG | 0.467659 | 1.4:+58931111 | None:intergenic |
| CACAGCTTCCCAAGAACACT+TGG | 0.469604 | 1.4:+58932945 | None:intergenic |
| AAGAGCCCGTATGCGGTTTG+AGG | 0.473397 | 1.4:-58932857 | MS.gene39968:CDS |
| AAGGGAAAGCTATACGGTCT+TGG | 0.480141 | 1.4:-58931188 | MS.gene39968:CDS |
| GCTCCTCATATGACCTTTGA+CGG | 0.484551 | 1.4:+58930976 | None:intergenic |
| TAGCACGCTCGTCGCAGTAT+TGG | 0.486252 | 1.4:+58932496 | None:intergenic |
| TTGATGCAACACTACCCTTC+CGG | 0.489648 | 1.4:+58931147 | None:intergenic |
| CGGAGAGCACGCTGAGCGTA+TGG | 0.490492 | 1.4:-58932677 | MS.gene39968:intron |
| CGAAGAGGGTGGTGGAGAGC+TGG | 0.490661 | 1.4:-58933337 | MS.gene39968:CDS |
| GGGATCACCTGGGTCCTCCC+AGG | 0.492872 | 1.4:-58933670 | MS.gene39968:CDS |
| TCGTGAAGCTCGTTAATAAA+CGG | 0.493110 | 1.4:+58932543 | None:intergenic |
| GCGGTATAATACTCACTTAG+TGG | 0.494631 | 1.4:-58933772 | MS.gene39968:CDS |
| TGTTGTGGAGGGATTTGTTG+GGG | 0.500135 | 1.4:+58933486 | None:intergenic |
| TTGGGCGTCTGAGGCGTTCA+AGG | 0.500299 | 1.4:-58932776 | MS.gene39968:CDS |
| AAGAACCGGGCGTCGGAAAA+GGG | 0.501037 | 1.4:-58932733 | MS.gene39968:CDS |
| CTCTTTCCATTAGGTTTCGG+AGG | 0.502358 | 1.4:+58933813 | None:intergenic |
| GAAAGAGCAAGGGCAACAGC+AGG | 0.505028 | 1.4:-58933797 | MS.gene39968:CDS |
| ATAGGCTAGGAGGTTGCGTC+GGG | 0.507036 | 1.4:-58932568 | MS.gene39968:intron |
| ATTCTTTGACCTTCAACACT+TGG | 0.510375 | 1.4:-58931235 | MS.gene39968:CDS |
| AAGATTTGCTTAACCGTCAA+AGG | 0.511841 | 1.4:-58930989 | MS.gene39968:CDS |
| TGTTGTTGTTGAGGAACAGG+TGG | 0.512691 | 1.4:+58933420 | None:intergenic |
| TGAGGAGCAGAAGCCGTCGC+AGG | 0.513097 | 1.4:+58933633 | None:intergenic |
| AATACTGCGACGAGCGTGCT+AGG | 0.515851 | 1.4:-58932494 | MS.gene39968:CDS |
| ATGATAGCAGTTATGAATGA+TGG | 0.523463 | 1.4:+58933125 | None:intergenic |
| GCTTCAGCAGCCGGTTTGGA+AGG | 0.524446 | 1.4:+58933156 | None:intergenic |
| AGACAAGAAAGCGGCCACAT+TGG | 0.524562 | 1.4:-58932834 | MS.gene39968:CDS |
| TATGGTGGTAAATGATAGGT+CGG | 0.525246 | 1.4:+58933537 | None:intergenic |
| GGAGGAAGGAAGGTCCCATA+AGG | 0.527593 | 1.4:+58933558 | None:intergenic |
| AGAAAGCGGCCACATTGGAT+TGG | 0.531391 | 1.4:-58932829 | MS.gene39968:CDS |
| GGACCCTTCACCATGATTGA+GGG | 0.531656 | 1.4:+58931112 | None:intergenic |
| TACTGGAGGGCACATGTAAG+TGG | 0.532234 | 1.4:+58933608 | None:intergenic |
| CCAATTCATCAAAGATAGGC+GGG | 0.535490 | 1.4:+58932806 | None:intergenic |
| AGGAGCAGCTACACTAGCCT+GGG | 0.541346 | 1.4:+58933653 | None:intergenic |
| TAACCGTCAAAGGTCATATG+AGG | 0.541572 | 1.4:-58930979 | MS.gene39968:CDS |
| GTTGTTGTTGAGGAACAGGT+GGG | 0.541984 | 1.4:+58933421 | None:intergenic |
| GAAGGTCCCATAAGGAGGTA+TGG | 0.543026 | 1.4:+58933566 | None:intergenic |
| TAGTAGAAATGACAGGCATC+GGG | 0.543147 | 1.4:+58933724 | None:intergenic |
| TTAAAAGCGGCGCACTAGTG+TGG | 0.545514 | 1.4:+58930914 | None:intergenic |
| GTAGTAGAAATGACAGGCAT+CGG | 0.546041 | 1.4:+58933723 | None:intergenic |
| AAGGTCATATGAGGAGCAGC+TGG | 0.548144 | 1.4:-58930970 | MS.gene39968:CDS |
| AAATAGCCTCGGCAAGCTGC+CGG | 0.549139 | 1.4:+58931279 | None:intergenic |
| TAAAAGCGGCGCACTAGTGT+GGG | 0.551339 | 1.4:+58930915 | None:intergenic |
| CAAGAAAATGTGGTCGAAGA+GGG | 0.555530 | 1.4:-58933351 | MS.gene39968:CDS |
| ATGTGCCCTCCAGTACATCC+TGG | 0.557262 | 1.4:-58933600 | MS.gene39968:CDS |
| CGAGCGTGCTAGGAGTGTGC+AGG | 0.557294 | 1.4:-58932484 | MS.gene39968:intron |
| AGTTGCTGGAGACAAGAAGA+AGG | 0.557374 | 1.4:-58931207 | MS.gene39968:CDS |
| CTAAGACTAACCCTCAATCA+TGG | 0.562434 | 1.4:-58931122 | MS.gene39968:CDS |
| AATAGGCTAGGAGGTTGCGT+CGG | 0.563005 | 1.4:-58932569 | MS.gene39968:intron |
| GGTATGGTGCCATAATATCC+AGG | 0.563962 | 1.4:+58933582 | None:intergenic |
| GCAAGGGCAACAGCAGGAAG+CGG | 0.568162 | 1.4:-58933791 | MS.gene39968:CDS |
| GTAACTTGGCTGCTAACTAC+CGG | 0.570124 | 1.4:-58931166 | MS.gene39968:CDS |
| ACGCTCGTCGCAGTATTGGC+CGG | 0.570260 | 1.4:+58932500 | None:intergenic |
| TGTCTCCTCAAACCGCATAC+GGG | 0.571839 | 1.4:+58932852 | None:intergenic |
| AATGTGGTCGAAGAGGGTGG+TGG | 0.572688 | 1.4:-58933345 | MS.gene39968:CDS |
| TCTGCTGCATCTTCTAGCCA+GGG | 0.572703 | 1.4:-58933690 | MS.gene39968:CDS |
| ATGATAGGTCGGAGGAAGGA+AGG | 0.575427 | 1.4:+58933548 | None:intergenic |
| GGTTAAGTATTGGGCGTCTG+AGG | 0.575914 | 1.4:-58932785 | MS.gene39968:CDS |
| TAGTGTAGCTGCTCCTGCGA+CGG | 0.577442 | 1.4:-58933646 | MS.gene39968:CDS |
| CTTAGTGGACGCAGCGACAG+AGG | 0.579770 | 1.4:-58933757 | MS.gene39968:CDS |
| AGCAAAGAAGAACCGGGCGT+CGG | 0.582886 | 1.4:-58932740 | MS.gene39968:CDS |
| GTAGATGTAGTAGAAATGAC+AGG | 0.584368 | 1.4:+58933717 | None:intergenic |
| TTGAACAGGAGGAGTATGAC+CGG | 0.586858 | 1.4:-58931298 | MS.gene39968:intron |
| GAGAATCTCTCGGATAATCC+GGG | 0.586945 | 1.4:+58933295 | None:intergenic |
| GTAAATGATAGGTCGGAGGA+AGG | 0.587191 | 1.4:+58933544 | None:intergenic |
| CTAACCCTCAATCATGGTGA+AGG | 0.587704 | 1.4:-58931116 | MS.gene39968:CDS |
| CGCCAGCTGAGGCTGCTGGG+AGG | 0.589233 | 1.4:+58931091 | None:intergenic |
| TGAACTTACGAGTTTCCACT+AGG | 0.589440 | 1.4:+58933252 | None:intergenic |
| GGGCACATGTAAGTGGGATG+AGG | 0.589794 | 1.4:+58933615 | None:intergenic |
| GAAACCTAATGGAAAGAGCA+AGG | 0.595131 | 1.4:-58933808 | MS.gene39968:CDS |
| CTTGTGACAAATAGGCTAGG+AGG | 0.597967 | 1.4:-58932578 | MS.gene39968:intron |
| AAGCGGCGCACTAGTGTGGG+AGG | 0.600468 | 1.4:+58930918 | None:intergenic |
| GTATGACCGGCAGCTTGCCG+AGG | 0.601524 | 1.4:-58931285 | MS.gene39968:CDS |
| CGATTCATCTTAAGGCCTAG+TGG | 0.601629 | 1.4:-58933267 | MS.gene39968:CDS |
| CGACAAAGCAAAGAAGAACC+GGG | 0.601764 | 1.4:-58932746 | MS.gene39968:CDS |
| AGAGCAATTAACGCAACAGA+TGG | 0.604437 | 1.4:-58931033 | MS.gene39968:CDS |
| ACAAGAAAATGTGGTCGAAG+AGG | 0.610168 | 1.4:-58933352 | MS.gene39968:CDS |
| ACCAATTCATCAAAGATAGG+CGG | 0.615254 | 1.4:+58932805 | None:intergenic |
| TACTTAGAAGAGCCCGTATG+CGG | 0.616606 | 1.4:-58932864 | MS.gene39968:CDS |
| GTTTAGGCAAGCCAGGCTCA+AGG | 0.620563 | 1.4:-58930943 | MS.gene39968:CDS |
| TAATATCCAGGATGTACTGG+AGG | 0.622903 | 1.4:+58933594 | None:intergenic |
| CTTGGCTGCTAACTACCGGA+AGG | 0.625442 | 1.4:-58931162 | MS.gene39968:CDS |
| CTTCTAGCCAGGGATCACCT+GGG | 0.625749 | 1.4:-58933680 | MS.gene39968:CDS |
| GTTGCTGGAGACAAGAAGAA+GGG | 0.632114 | 1.4:-58931206 | MS.gene39968:CDS |
| AATCGACGACGAGAATCTCT+CGG | 0.634346 | 1.4:+58933285 | None:intergenic |
| GGAAGGAAGGTCCCATAAGG+AGG | 0.636273 | 1.4:+58933561 | None:intergenic |
| TAACCCTCAATCATGGTGAA+GGG | 0.637969 | 1.4:-58931115 | MS.gene39968:CDS |
| TGTGGTGGGACTGAATATGG+TGG | 0.638237 | 1.4:+58933522 | None:intergenic |
| AAACCTAATGGAAAGAGCAA+GGG | 0.642664 | 1.4:-58933807 | MS.gene39968:CDS |
| ACACTAGCCTGGGAGGACCC+AGG | 0.643294 | 1.4:+58933663 | None:intergenic |
| GGTGGTAAATGATAGGTCGG+AGG | 0.646104 | 1.4:+58933540 | None:intergenic |
| ACTGGTGGTTGCTTAAGCAA+CGG | 0.650281 | 1.4:-58932697 | MS.gene39968:CDS |
| TTGGAAGACATATGGTGATG+TGG | 0.652180 | 1.4:-58933097 | MS.gene39968:CDS |
| TCAACATTGGGACTTAAAAG+CGG | 0.654070 | 1.4:+58930901 | None:intergenic |
| AGCGGCGCACTAGTGTGGGA+GGG | 0.654626 | 1.4:+58930919 | None:intergenic |
| AGCAGCTACACTAGCCTGGG+AGG | 0.655945 | 1.4:+58933656 | None:intergenic |
| TTGGCTGCTAACTACCGGAA+GGG | 0.659168 | 1.4:-58931161 | MS.gene39968:CDS |
| GGAGGATGCATTCACACTGG+TGG | 0.660778 | 1.4:-58932712 | MS.gene39968:CDS |
| GAAAATGTGGTCGAAGAGGG+TGG | 0.661104 | 1.4:-58933348 | MS.gene39968:CDS |
| GCAACAGATGGCAAGTCAAG+CGG | 0.662263 | 1.4:-58931021 | MS.gene39968:CDS |
| AACCGGGCGTCGGAAAAGGG+AGG | 0.663571 | 1.4:-58932730 | MS.gene39968:CDS |
| ACAGCCCCAACAAGAAAATG+TGG | 0.669400 | 1.4:-58933361 | MS.gene39968:CDS |
| AAGGGAGGATGCATTCACAC+TGG | 0.674246 | 1.4:-58932715 | MS.gene39968:CDS |
| AATATCCAGGATGTACTGGA+GGG | 0.686056 | 1.4:+58933595 | None:intergenic |
| ACTGGAGGGCACATGTAAGT+GGG | 0.711086 | 1.4:+58933609 | None:intergenic |
| ATAGGCGGGCCAATCCAATG+TGG | 0.757504 | 1.4:+58932820 | None:intergenic |
| GGTTTGAGGAGACAAGAAAG+CGG | 0.763875 | 1.4:-58932843 | MS.gene39968:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATCAAAATTAAATGATA+TGG | + | chr1.4:58932107-58932126 | None:intergenic | 15.0% |
| !!! | AAAATTGAGGATTTTATAAA+AGG | - | chr1.4:58932815-58932834 | MS.gene39968:CDS | 15.0% |
| !!! | TATTTTGTTATTATTTGAAC+AGG | - | chr1.4:58933418-58933437 | MS.gene39968:CDS | 15.0% |
| !!! | TTTTGATAATAAACGAAATA+AGG | + | chr1.4:58933325-58933344 | None:intergenic | 15.0% |
| !! | CAGTAAAAATGAAATTGATA+TGG | + | chr1.4:58933066-58933085 | None:intergenic | 20.0% |
| !! | TCACTATGAAATATATGATT+TGG | - | chr1.4:58932460-58932479 | MS.gene39968:intron | 20.0% |
| !! | TGAAATATTTGAGAAAAATC+AGG | - | chr1.4:58932975-58932994 | MS.gene39968:intron | 20.0% |
| !!! | TTTTATTTCTTGTGACAAAT+AGG | - | chr1.4:58932144-58932163 | MS.gene39968:intron | 20.0% |
| !!! | TTTTTTTTTAATCCGAATTG+TGG | - | chr1.4:58932363-58932382 | MS.gene39968:intron | 20.0% |
| ! | AACTAATCATAAGCAATAAC+AGG | + | chr1.4:58933301-58933320 | None:intergenic | 25.0% |
| ! | AATTTCAGTTAAGCAAAAGT+TGG | + | chr1.4:58932396-58932415 | None:intergenic | 25.0% |
| ! | ACTAATCATAAGCAATAACA+GGG | + | chr1.4:58933300-58933319 | None:intergenic | 25.0% |
| ! | ATATATTTCATAGTGAAGAC+TGG | + | chr1.4:58932456-58932475 | None:intergenic | 25.0% |
| ! | ATTTCAGTTAAGCAAAAGTT+GGG | + | chr1.4:58932395-58932414 | None:intergenic | 25.0% |
| ! | TAAGACTTATGATAAAACTC+TGG | + | chr1.4:58932912-58932931 | None:intergenic | 25.0% |
| ! | TGATGAATTGGTTAAGTATT+GGG | - | chr1.4:58931936-58931955 | MS.gene39968:intron | 25.0% |
| ! | TTAACCAATTCATCAAAGAT+AGG | + | chr1.4:58931931-58931950 | None:intergenic | 25.0% |
| ! | TTGATGAATTGGTTAAGTAT+TGG | - | chr1.4:58931935-58931954 | MS.gene39968:intron | 25.0% |
| ! | TTTGTCAATCTAATGAAATG+AGG | - | chr1.4:58932781-58932800 | MS.gene39968:CDS | 25.0% |
| !! | ACTTTTGCTTAACTGAAATT+TGG | - | chr1.4:58932396-58932415 | MS.gene39968:intron | 25.0% |
| !!! | GCTTTTTGAAAGAATAGAAA+AGG | - | chr1.4:58933024-58933043 | MS.gene39968:intron | 25.0% |
| !!! | GTTTTTTAATGATGTTTTCC+CGG | - | chr1.4:58931417-58931436 | MS.gene39968:intron | 25.0% |
| !!! | TTTGTTATTATTTGAACAGG+AGG | - | chr1.4:58933421-58933440 | MS.gene39968:CDS | 25.0% |
| AAAGTCGATTAAAATTACCG+CGG | + | chr1.4:58933256-58933275 | None:intergenic | 30.0% | |
| AATAACAGAGAAACAGTGTA+AGG | + | chr1.4:58933374-58933393 | None:intergenic | 30.0% | |
| ATGATAGCAGTTATGAATGA+TGG | + | chr1.4:58931608-58931627 | None:intergenic | 30.0% | |
| ATTTAAGAACAGAACTTGCA+AGG | + | chr1.4:58933399-58933418 | None:intergenic | 30.0% | |
| CATTACATAGCTCAATTCTT+CGG | + | chr1.4:58933132-58933151 | None:intergenic | 30.0% | |
| GGTTTCTGTCAAAAAAATTG+AGG | - | chr1.4:58932802-58932821 | MS.gene39968:CDS | 30.0% | |
| TGAATATGGTGGTAAATGAT+AGG | + | chr1.4:58931200-58931219 | None:intergenic | 30.0% | |
| TGTGAATTATGATCGATTGT+TGG | - | chr1.4:58932862-58932881 | MS.gene39968:CDS | 30.0% | |
| TGTTGTTGAATTTCTCTGAT+TGG | - | chr1.4:58933084-58933103 | MS.gene39968:CDS | 30.0% | |
| TTATGATAAAACTCTGGTGA+GGG | + | chr1.4:58932906-58932925 | None:intergenic | 30.0% | |
| TTTCAGTTAAGCAAAAGTTG+GGG | + | chr1.4:58932394-58932413 | None:intergenic | 30.0% | |
| ! | ATAACTGCTATCATCACTTT+TGG | - | chr1.4:58931614-58931633 | MS.gene39968:intron | 30.0% |
| ! | CTCTTGTTCTAGATATGATT+TGG | - | chr1.4:58932425-58932444 | MS.gene39968:intron | 30.0% |
| ! | GTAGGAATAACTAAGAGTAT+TGG | - | chr1.4:58932698-58932717 | MS.gene39968:CDS | 30.0% |
| !!! | AACTTTTTTCCAAGTGTTGA+AGG | + | chr1.4:58933507-58933526 | None:intergenic | 30.0% |
| AAACCTAATGGAAAGAGCAA+GGG | - | chr1.4:58930923-58930942 | MS.gene39968:CDS | 35.0% | |
| AACACTTGGAAAAAAGTTGC+TGG | - | chr1.4:58933509-58933528 | MS.gene39968:CDS | 35.0% | |
| AACCTACTGCCTTAATTGTA+TGG | - | chr1.4:58932750-58932769 | MS.gene39968:CDS | 35.0% | |
| AAGAAGAAGGGAAAGCTATA+CGG | - | chr1.4:58933536-58933555 | MS.gene39968:CDS | 35.0% | |
| AAGACTCATACGTCAACATT+AGG | + | chr1.4:58933211-58933230 | None:intergenic | 35.0% | |
| AATGACAAACAAGACAGAAC+TGG | + | chr1.4:58932336-58932355 | None:intergenic | 35.0% | |
| ACCAATTCATCAAAGATAGG+CGG | + | chr1.4:58931928-58931947 | None:intergenic | 35.0% | |
| AGACCCATTAAAAATAGCCT+CGG | + | chr1.4:58933465-58933484 | None:intergenic | 35.0% | |
| AGCATCAGACCATACAATTA+AGG | + | chr1.4:58932762-58932781 | None:intergenic | 35.0% | |
| ATCTCAAGAGTTGCATCTTT+AGG | + | chr1.4:58932937-58932956 | None:intergenic | 35.0% | |
| ATTCTTTGACCTTCAACACT+TGG | - | chr1.4:58933495-58933514 | MS.gene39968:CDS | 35.0% | |
| CGAAGAATTGAGCTATGTAA+TGG | - | chr1.4:58933130-58933149 | MS.gene39968:CDS | 35.0% | |
| CTTATGATAAAACTCTGGTG+AGG | + | chr1.4:58932907-58932926 | None:intergenic | 35.0% | |
| GAAACGCACAAAAATAAGTC+CGG | - | chr1.4:58932211-58932230 | MS.gene39968:intron | 35.0% | |
| GTAGATGTAGTAGAAATGAC+AGG | + | chr1.4:58931016-58931035 | None:intergenic | 35.0% | |
| TATGGTGGTAAATGATAGGT+CGG | + | chr1.4:58931196-58931215 | None:intergenic | 35.0% | |
| TCGTGAAGCTCGTTAATAAA+CGG | + | chr1.4:58932190-58932209 | None:intergenic | 35.0% | |
| TTGCTCTTTCCATTAGGTTT+CGG | + | chr1.4:58930923-58930942 | None:intergenic | 35.0% | |
| TTTCTTGTGACAAATAGGCT+AGG | - | chr1.4:58932149-58932168 | MS.gene39968:intron | 35.0% | |
| ! | AAGATTTGCTTAACCGTCAA+AGG | - | chr1.4:58933741-58933760 | MS.gene39968:CDS | 35.0% |
| ! | ATGATAATGAAAAAGAGCGC+TGG | - | chr1.4:58931656-58931675 | MS.gene39968:intron | 35.0% |
| ! | TTCGACCACATTTTCTTGTT+GGG | + | chr1.4:58931377-58931396 | None:intergenic | 35.0% |
| ! | TTTTAATCCGAATTGTGGTC+TGG | - | chr1.4:58932368-58932387 | MS.gene39968:intron | 35.0% |
| !! | ATGATTGAGGGTTAGTCTTA+GGG | + | chr1.4:58933609-58933628 | None:intergenic | 35.0% |
| !! | ATTTGTTGTTGGGAAAAAGG+TGG | + | chr1.4:58931274-58931293 | None:intergenic | 35.0% |
| !! | CATCACTTTTGGAAGACATA+TGG | - | chr1.4:58931625-58931644 | MS.gene39968:intron | 35.0% |
| !! | CGACTTTGTTGATTCTTACA+AGG | - | chr1.4:58933269-58933288 | MS.gene39968:CDS | 35.0% |
| !! | GTTCTGTCTTGTTTGTCATT+TGG | - | chr1.4:58932336-58932355 | MS.gene39968:intron | 35.0% |
| !! | TTTGTTGTTGGGAAAAAGGT+GGG | + | chr1.4:58931273-58931292 | None:intergenic | 35.0% |
| !!! | GCACTATTTTTGTTGCAGTT+TGG | - | chr1.4:58932308-58932327 | MS.gene39968:intron | 35.0% |
| !!! | TTGCCGAGGCTATTTTTAAT+GGG | - | chr1.4:58933459-58933478 | MS.gene39968:CDS | 35.0% |
| !!! | TTTTGTTGTTGTTGAGGAAC+AGG | + | chr1.4:58931316-58931335 | None:intergenic | 35.0% |
| AATATCCAGGATGTACTGGA+GGG | + | chr1.4:58931138-58931157 | None:intergenic | 40.0% | |
| AATGCAGACCAAGTGTTCTT+GGG | - | chr1.4:58931777-58931796 | MS.gene39968:intron | 40.0% | |
| ACAAGAAAATGTGGTCGAAG+AGG | - | chr1.4:58931378-58931397 | MS.gene39968:intron | 40.0% | |
| ACAATTAAGGCAGTAGGTTC+TGG | + | chr1.4:58932749-58932768 | None:intergenic | 40.0% | |
| AGAGCAATTAACGCAACAGA+TGG | - | chr1.4:58933697-58933716 | MS.gene39968:CDS | 40.0% | |
| CAAGAAAATGTGGTCGAAGA+GGG | - | chr1.4:58931379-58931398 | MS.gene39968:intron | 40.0% | |
| CAATTAAGGCAGTAGGTTCT+GGG | + | chr1.4:58932748-58932767 | None:intergenic | 40.0% | |
| CCAATTCATCAAAGATAGGC+GGG | + | chr1.4:58931927-58931946 | None:intergenic | 40.0% | |
| CCAGTACATCCTGGATATTA+TGG | - | chr1.4:58931139-58931158 | MS.gene39968:CDS | 40.0% | |
| CCATAATATCCAGGATGTAC+TGG | + | chr1.4:58931142-58931161 | None:intergenic | 40.0% | |
| CTAAGACTAACCCTCAATCA+TGG | - | chr1.4:58933608-58933627 | MS.gene39968:CDS | 40.0% | |
| GAAACCTAATGGAAAGAGCA+AGG | - | chr1.4:58930922-58930941 | MS.gene39968:CDS | 40.0% | |
| GACCATACAATTAAGGCAGT+AGG | + | chr1.4:58932755-58932774 | None:intergenic | 40.0% | |
| GCGGTATAATACTCACTTAG+TGG | - | chr1.4:58930958-58930977 | MS.gene39968:CDS | 40.0% | |
| GTAGTAGAAATGACAGGCAT+CGG | + | chr1.4:58931010-58931029 | None:intergenic | 40.0% | |
| GTCTGTAACAAGCTTAAGTG+TGG | - | chr1.4:58932507-58932526 | MS.gene39968:CDS | 40.0% | |
| TAACCCTCAATCATGGTGAA+GGG | - | chr1.4:58933615-58933634 | MS.gene39968:CDS | 40.0% | |
| TAACCGTCAAAGGTCATATG+AGG | - | chr1.4:58933751-58933770 | MS.gene39968:CDS | 40.0% | |
| TAATATCCAGGATGTACTGG+AGG | + | chr1.4:58931139-58931158 | None:intergenic | 40.0% | |
| TAATGCAGACCAAGTGTTCT+TGG | - | chr1.4:58931776-58931795 | MS.gene39968:intron | 40.0% | |
| TAGTAGAAATGACAGGCATC+GGG | + | chr1.4:58931009-58931028 | None:intergenic | 40.0% | |
| TGAACTTACGAGTTTCCACT+AGG | + | chr1.4:58931481-58931500 | None:intergenic | 40.0% | |
| TTAAAATTACCGCGGACAGA+TGG | + | chr1.4:58933248-58933267 | None:intergenic | 40.0% | |
| TTTCATAGTGAAGACTGGCA+AGG | + | chr1.4:58932451-58932470 | None:intergenic | 40.0% | |
| ! | CAGATTTTTGCCTTCCAAAC+CGG | - | chr1.4:58931564-58931583 | MS.gene39968:intron | 40.0% |
| ! | CTTCGACCACATTTTCTTGT+TGG | + | chr1.4:58931378-58931397 | None:intergenic | 40.0% |
| ! | CTTGTCGTATCTCTCAGTTT+TGG | - | chr1.4:58932273-58932292 | MS.gene39968:intron | 40.0% |
| ! | TCGACCACATTTTCTTGTTG+GGG | + | chr1.4:58931376-58931395 | None:intergenic | 40.0% |
| ! | TGTGGTAAGCTTTAGCTCAA+GGG | - | chr1.4:58932525-58932544 | MS.gene39968:CDS | 40.0% |
| ! | TTGGAAGACATATGGTGATG+TGG | - | chr1.4:58931633-58931652 | MS.gene39968:intron | 40.0% |
| ! | TTGTTGTGGAGGGATTTGTT+GGG | + | chr1.4:58931248-58931267 | None:intergenic | 40.0% |
| ! | TTTGTTGTGGAGGGATTTGT+TGG | + | chr1.4:58931249-58931268 | None:intergenic | 40.0% |
| !! | AGAGTATTGGCTCCAAAAGT+TGG | - | chr1.4:58932711-58932730 | MS.gene39968:CDS | 40.0% |
| !! | ATGAAAAAGAGCGCTGGTTT+AGG | - | chr1.4:58931662-58931681 | MS.gene39968:intron | 40.0% |
| !! | CATGATTGAGGGTTAGTCTT+AGG | + | chr1.4:58933610-58933629 | None:intergenic | 40.0% |
| !! | GAGTATTGGCTCCAAAAGTT+GGG | - | chr1.4:58932712-58932731 | MS.gene39968:CDS | 40.0% |
| !! | GGGATTTGTTGTTGGGAAAA+AGG | + | chr1.4:58931277-58931296 | None:intergenic | 40.0% |
| !! | TTGTGGAGGGATTTGTTGTT+GGG | + | chr1.4:58931284-58931303 | None:intergenic | 40.0% |
| !! | TTTTGTGGTGGGACTGAATA+TGG | + | chr1.4:58931214-58931233 | None:intergenic | 40.0% |
| !!! | CTTGCCGAGGCTATTTTTAA+TGG | - | chr1.4:58933458-58933477 | MS.gene39968:CDS | 40.0% |
| !!! | GAAAAAGGTGGGTTTTGTTG+TGG | + | chr1.4:58931262-58931281 | None:intergenic | 40.0% |
| !!! | TGGTGGGTTTTGTTGTTGTT+GGG | + | chr1.4:58931323-58931342 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGTTG+TGG | + | chr1.4:58931343-58931362 | None:intergenic | 40.0% |
| AAGGGAAAGCTATACGGTCT+TGG | - | chr1.4:58933542-58933561 | MS.gene39968:CDS | 45.0% | |
| AATCGACGACGAGAATCTCT+CGG | + | chr1.4:58931448-58931467 | None:intergenic | 45.0% | |
| ACAGCCCCAACAAGAAAATG+TGG | - | chr1.4:58931369-58931388 | MS.gene39968:intron | 45.0% | |
| ACTGGTGGTTGCTTAAGCAA+CGG | - | chr1.4:58932033-58932052 | MS.gene39968:intron | 45.0% | |
| AGTTGCTGGAGACAAGAAGA+AGG | - | chr1.4:58933523-58933542 | MS.gene39968:CDS | 45.0% | |
| ATGGCACCATACCTCCTTAT+GGG | - | chr1.4:58931158-58931177 | MS.gene39968:CDS | 45.0% | |
| CCCGCCTATCTTTGATGAAT+TGG | - | chr1.4:58931924-58931943 | MS.gene39968:intron | 45.0% | |
| CCGACAAAGCAAAGAAGAAC+CGG | - | chr1.4:58931983-58932002 | MS.gene39968:intron | 45.0% | |
| CCGGTTCTTCTTTGCTTTGT+CGG | + | chr1.4:58931986-58932005 | None:intergenic | 45.0% | |
| CGACAAAGCAAAGAAGAACC+GGG | - | chr1.4:58931984-58932003 | MS.gene39968:intron | 45.0% | |
| CGAGAATCTCTCGGATAATC+CGG | + | chr1.4:58931439-58931458 | None:intergenic | 45.0% | |
| CGATTCATCTTAAGGCCTAG+TGG | - | chr1.4:58931463-58931482 | MS.gene39968:intron | 45.0% | |
| CTAACCCTCAATCATGGTGA+AGG | - | chr1.4:58933614-58933633 | MS.gene39968:CDS | 45.0% | |
| CTCTTTCCATTAGGTTTCGG+AGG | + | chr1.4:58930920-58930939 | None:intergenic | 45.0% | |
| CTTGTGACAAATAGGCTAGG+AGG | - | chr1.4:58932152-58932171 | MS.gene39968:intron | 45.0% | |
| GAGAATCTCTCGGATAATCC+GGG | + | chr1.4:58931438-58931457 | None:intergenic | 45.0% | |
| GATAAAACTCTGGTGAGGGA+AGG | + | chr1.4:58932902-58932921 | None:intergenic | 45.0% | |
| GCTCCTCATATGACCTTTGA+CGG | + | chr1.4:58933757-58933776 | None:intergenic | 45.0% | |
| GGTTTGAGGAGACAAGAAAG+CGG | - | chr1.4:58931887-58931906 | MS.gene39968:intron | 45.0% | |
| GTAAATGATAGGTCGGAGGA+AGG | + | chr1.4:58931189-58931208 | None:intergenic | 45.0% | |
| GTAACTTGGCTGCTAACTAC+CGG | - | chr1.4:58933564-58933583 | MS.gene39968:CDS | 45.0% | |
| GTTGCTGGAGACAAGAAGAA+GGG | - | chr1.4:58933524-58933543 | MS.gene39968:CDS | 45.0% | |
| TACTTAGAAGAGCCCGTATG+CGG | - | chr1.4:58931866-58931885 | MS.gene39968:intron | 45.0% | |
| TATGGCACCATACCTCCTTA+TGG | - | chr1.4:58931157-58931176 | MS.gene39968:CDS | 45.0% | |
| TGAATAAGCTCTCGCATCTC+TGG | + | chr1.4:58933665-58933684 | None:intergenic | 45.0% | |
| TTGATGCAACACTACCCTTC+CGG | + | chr1.4:58933586-58933605 | None:intergenic | 45.0% | |
| TTGCCCTTGCTCTTTCCATT+AGG | + | chr1.4:58930929-58930948 | None:intergenic | 45.0% | |
| TTGTCTCCTCAAACCGCATA+CGG | + | chr1.4:58931882-58931901 | None:intergenic | 45.0% | |
| TTGTGATATCAGCAGCAACG+AGG | + | chr1.4:58933156-58933175 | None:intergenic | 45.0% | |
| ! | ACATTTTCTTGTTGGGGCTG+TGG | + | chr1.4:58931370-58931389 | None:intergenic | 45.0% |
| ! | ATTGGCTCCAAAAGTTGGGT+GGG | - | chr1.4:58932716-58932735 | MS.gene39968:CDS | 45.0% |
| ! | GACATTTCCCACCCAACTTT+TGG | + | chr1.4:58932726-58932745 | None:intergenic | 45.0% |
| ! | GCTATACGGTCTTGGTAACT+TGG | - | chr1.4:58933550-58933569 | MS.gene39968:CDS | 45.0% |
| ! | GTGTGGTAAGCTTTAGCTCA+AGG | - | chr1.4:58932524-58932543 | MS.gene39968:CDS | 45.0% |
| ! | GTTGTTGTTGAGGAACAGGT+GGG | + | chr1.4:58931312-58931331 | None:intergenic | 45.0% |
| ! | TGTTGTTGTTGAGGAACAGG+TGG | + | chr1.4:58931313-58931332 | None:intergenic | 45.0% |
| ! | TTGAACAGGAGGAGTATGAC+CGG | - | chr1.4:58933432-58933451 | MS.gene39968:CDS | 45.0% |
| !! | CTCGTCGTCGATTCATCTTA+AGG | - | chr1.4:58931455-58931474 | MS.gene39968:intron | 45.0% |
| !! | GGTATGGTGCCATAATATCC+AGG | + | chr1.4:58931151-58931170 | None:intergenic | 45.0% |
| !! | GTTGCAGCTCATAGTCTTGT+AGG | - | chr1.4:58932680-58932699 | MS.gene39968:CDS | 45.0% |
| !! | GTTGTGGAGGGATTTGTTGT+TGG | + | chr1.4:58931285-58931304 | None:intergenic | 45.0% |
| !! | TATTGGCTCCAAAAGTTGGG+TGG | - | chr1.4:58932715-58932734 | MS.gene39968:CDS | 45.0% |
| !! | TGTTGTGGAGGGATTTGTTG+GGG | + | chr1.4:58931247-58931266 | None:intergenic | 45.0% |
| !!! | AAAGGTGGGTTTTGTTGTGG+AGG | + | chr1.4:58931259-58931278 | None:intergenic | 45.0% |
| !!! | AAGGTGGGTTTTGTTGTGGA+GGG | + | chr1.4:58931258-58931277 | None:intergenic | 45.0% |
| !!! | GGTGGGTTTTGTTGTTGTTG+AGG | + | chr1.4:58931322-58931341 | None:intergenic | 45.0% |
| !!! | GGTGGGTTTTGTTGTTGTTG+GGG | + | chr1.4:58931322-58931341 | None:intergenic | 45.0% |
| !!! | GTGGTGGGTTTTGTTGTTGT+TGG | + | chr1.4:58931324-58931343 | None:intergenic | 45.0% |
| AAGGGAGGATGCATTCACAC+TGG | - | chr1.4:58932015-58932034 | MS.gene39968:intron | 50.0% | |
| AAGGTCATATGAGGAGCAGC+TGG | - | chr1.4:58933760-58933779 | MS.gene39968:CDS | 50.0% | |
| AATAGGCTAGGAGGTTGCGT+CGG | - | chr1.4:58932161-58932180 | MS.gene39968:intron | 50.0% | |
| AATTACCGCGGACAGATGGT+TGG | + | chr1.4:58933244-58933263 | None:intergenic | 50.0% | |
| AGAAAGCGGCCACATTGGAT+TGG | - | chr1.4:58931901-58931920 | MS.gene39968:intron | 50.0% | |
| AGACAAGAAAGCGGCCACAT+TGG | - | chr1.4:58931896-58931915 | MS.gene39968:intron | 50.0% | |
| AGGACCCTTCACCATGATTG+AGG | + | chr1.4:58933622-58933641 | None:intergenic | 50.0% | |
| ATCTGCTGCATCTTCTAGCC+AGG | - | chr1.4:58931039-58931058 | MS.gene39968:CDS | 50.0% | |
| ATGATAGGTCGGAGGAAGGA+AGG | + | chr1.4:58931185-58931204 | None:intergenic | 50.0% | |
| CACAGCTTCCCAAGAACACT+TGG | + | chr1.4:58931788-58931807 | None:intergenic | 50.0% | |
| GAAAATGTGGTCGAAGAGGG+TGG | - | chr1.4:58931382-58931401 | MS.gene39968:intron | 50.0% | |
| GAAGGTCCCATAAGGAGGTA+TGG | + | chr1.4:58931167-58931186 | None:intergenic | 50.0% | |
| GATCTGATTGCTTCAGCAGC+CGG | + | chr1.4:58931586-58931605 | None:intergenic | 50.0% | |
| GCAACAGATGGCAAGTCAAG+CGG | - | chr1.4:58933709-58933728 | MS.gene39968:CDS | 50.0% | |
| GGACCCTTCACCATGATTGA+GGG | + | chr1.4:58933621-58933640 | None:intergenic | 50.0% | |
| GGTGGTAAATGATAGGTCGG+AGG | + | chr1.4:58931193-58931212 | None:intergenic | 50.0% | |
| TAAAAGCGGCGCACTAGTGT+GGG | + | chr1.4:58933818-58933837 | None:intergenic | 50.0% | |
| TCTGCTGCATCTTCTAGCCA+GGG | - | chr1.4:58931040-58931059 | MS.gene39968:CDS | 50.0% | |
| TCTGGTGAGGGAAGGAGTTA+GGG | + | chr1.4:58932894-58932913 | None:intergenic | 50.0% | |
| TGTCTCCTCAAACCGCATAC+GGG | + | chr1.4:58931881-58931900 | None:intergenic | 50.0% | |
| TTAAAAGCGGCGCACTAGTG+TGG | + | chr1.4:58933819-58933838 | None:intergenic | 50.0% | |
| TTGGCTGCTAACTACCGGAA+GGG | - | chr1.4:58933569-58933588 | MS.gene39968:CDS | 50.0% | |
| TTTCTTGTTGGGGCTGTGGT+GGG | + | chr1.4:58931366-58931385 | None:intergenic | 50.0% | |
| ! | ACTGGAGGGCACATGTAAGT+GGG | + | chr1.4:58931124-58931143 | None:intergenic | 50.0% |
| ! | CAGAGCTGCTGCACGTTTTT+CGG | - | chr1.4:58931840-58931859 | MS.gene39968:intron | 50.0% |
| ! | GTTGTTGTTGGGGTTGTGGT+GGG | + | chr1.4:58931339-58931358 | None:intergenic | 50.0% |
| ! | TACTGGAGGGCACATGTAAG+TGG | + | chr1.4:58931125-58931144 | None:intergenic | 50.0% |
| ! | TGTGGTGGGACTGAATATGG+TGG | + | chr1.4:58931211-58931230 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGTTGTGG+TGG | + | chr1.4:58931340-58931359 | None:intergenic | 50.0% |
| ! | TTTTCTTGTTGGGGCTGTGG+TGG | + | chr1.4:58931367-58931386 | None:intergenic | 50.0% |
| !! | GAAGGGGAAGGTTTTGTGGT+GGG | + | chr1.4:58931225-58931244 | None:intergenic | 50.0% |
| !! | GGTTAAGTATTGGGCGTCTG+AGG | - | chr1.4:58931945-58931964 | MS.gene39968:intron | 50.0% |
| !! | TGGAGGGATTTGTTGGGGAA+GGG | + | chr1.4:58931242-58931261 | None:intergenic | 50.0% |
| !!! | ACAGGTGGGTTTTGTTGTGG+AGG | + | chr1.4:58931298-58931317 | None:intergenic | 50.0% |
| !!! | CAGGTGGGTTTTGTTGTGGA+GGG | + | chr1.4:58931297-58931316 | None:intergenic | 50.0% |
| !!! | GGAACAGGTGGGTTTTGTTG+TGG | + | chr1.4:58931301-58931320 | None:intergenic | 50.0% |
| AAATAGCCTCGGCAAGCTGC+CGG | + | chr1.4:58933454-58933473 | None:intergenic | 55.0% | |
| AAGAGCCCGTATGCGGTTTG+AGG | - | chr1.4:58931873-58931892 | MS.gene39968:intron | 55.0% | |
| AATACTGCGACGAGCGTGCT+AGG | - | chr1.4:58932236-58932255 | MS.gene39968:intron | 55.0% | |
| AATGTGGTCGAAGAGGGTGG+TGG | - | chr1.4:58931385-58931404 | MS.gene39968:intron | 55.0% | |
| AGCAAAGAAGAACCGGGCGT+CGG | - | chr1.4:58931990-58932009 | MS.gene39968:intron | 55.0% | |
| ATAGGCGGGCCAATCCAATG+TGG | + | chr1.4:58931913-58931932 | None:intergenic | 55.0% | |
| ATAGGCTAGGAGGTTGCGTC+GGG | - | chr1.4:58932162-58932181 | MS.gene39968:intron | 55.0% | |
| ATGTGCCCTCCAGTACATCC+TGG | - | chr1.4:58931130-58931149 | MS.gene39968:CDS | 55.0% | |
| CTCTGGTGAGGGAAGGAGTT+AGG | + | chr1.4:58932895-58932914 | None:intergenic | 55.0% | |
| CTTCTAGCCAGGGATCACCT+GGG | - | chr1.4:58931050-58931069 | MS.gene39968:CDS | 55.0% | |
| CTTGGCTGCTAACTACCGGA+AGG | - | chr1.4:58933568-58933587 | MS.gene39968:CDS | 55.0% | |
| GAAAGAGCAAGGGCAACAGC+AGG | - | chr1.4:58930933-58930952 | MS.gene39968:CDS | 55.0% | |
| GATTGCTTCAGCAGCCGGTT+TGG | + | chr1.4:58931581-58931600 | None:intergenic | 55.0% | |
| GGAAGGAAGGTCCCATAAGG+AGG | + | chr1.4:58931172-58931191 | None:intergenic | 55.0% | |
| GGAGGAAGGAAGGTCCCATA+AGG | + | chr1.4:58931175-58931194 | None:intergenic | 55.0% | |
| GGAGGATGCATTCACACTGG+TGG | - | chr1.4:58932018-58932037 | MS.gene39968:intron | 55.0% | |
| GGGCACATGTAAGTGGGATG+AGG | + | chr1.4:58931118-58931137 | None:intergenic | 55.0% | |
| GTTGGGGCCAGACCACAATT+CGG | + | chr1.4:58932378-58932397 | None:intergenic | 55.0% | |
| GTTTAGGCAAGCCAGGCTCA+AGG | - | chr1.4:58933787-58933806 | MS.gene39968:CDS | 55.0% | |
| TAGCACGCTCGTCGCAGTAT+TGG | + | chr1.4:58932237-58932256 | None:intergenic | 55.0% | |
| TAGTGTAGCTGCTCCTGCGA+CGG | - | chr1.4:58931084-58931103 | MS.gene39968:CDS | 55.0% | |
| TCTTCTAGCCAGGGATCACC+TGG | - | chr1.4:58931049-58931068 | MS.gene39968:CDS | 55.0% | |
| TGCATCCAACCATCTGTCCG+CGG | - | chr1.4:58933236-58933255 | MS.gene39968:intron | 55.0% | |
| TGGCTCAGTTTAGGCAAGCC+AGG | - | chr1.4:58933780-58933799 | MS.gene39968:CDS | 55.0% | |
| ! | AGGAGCAGCTACACTAGCCT+GGG | + | chr1.4:58931080-58931099 | None:intergenic | 55.0% |
| ! | AGGAGCAGCTGGCTCAGTTT+AGG | - | chr1.4:58933771-58933790 | MS.gene39968:CDS | 55.0% |
| ! | TGGGGAAGGGGAAGGTTTTG+TGG | + | chr1.4:58931229-58931248 | None:intergenic | 55.0% |
| !! | AAGAACCGGGCGTCGGAAAA+GGG | - | chr1.4:58931997-58932016 | MS.gene39968:intron | 55.0% |
| !! | GCGCTGGTTTAGGCTCTTTC+AGG | - | chr1.4:58931672-58931691 | MS.gene39968:intron | 55.0% |
| !! | GGAAGGGGAAGGTTTTGTGG+TGG | + | chr1.4:58931226-58931245 | None:intergenic | 55.0% |
| !! | GGAGGGATTTGTTGGGGAAG+GGG | + | chr1.4:58931241-58931260 | None:intergenic | 55.0% |
| !! | GGATTTGTTGGGGAAGGGGA+AGG | + | chr1.4:58931237-58931256 | None:intergenic | 55.0% |
| !! | GTGGAGGGATTTGTTGGGGA+AGG | + | chr1.4:58931243-58931262 | None:intergenic | 55.0% |
| CAGGAGCAGCTACACTAGCC+TGG | + | chr1.4:58931081-58931100 | None:intergenic | 60.0% | |
| GCAAGGGCAACAGCAGGAAG+CGG | - | chr1.4:58930939-58930958 | MS.gene39968:CDS | 60.0% | |
| ! | AGCAGCTACACTAGCCTGGG+AGG | + | chr1.4:58931077-58931096 | None:intergenic | 60.0% |
| ! | ATCCTCCCTTTTCCGACGCC+CGG | + | chr1.4:58932005-58932024 | None:intergenic | 60.0% |
| ! | CTTAGTGGACGCAGCGACAG+AGG | - | chr1.4:58930973-58930992 | MS.gene39968:CDS | 60.0% |
| ! | TTGGGCGTCTGAGGCGTTCA+AGG | - | chr1.4:58931954-58931973 | MS.gene39968:intron | 60.0% |
| !! | ACGCTCGTCGCAGTATTGGC+CGG | + | chr1.4:58932233-58932252 | None:intergenic | 60.0% |
| !! | GAAGAACCGGGCGTCGGAAA+AGG | - | chr1.4:58931996-58932015 | MS.gene39968:intron | 60.0% |
| !! | GCTTCAGCAGCCGGTTTGGA+AGG | + | chr1.4:58931577-58931596 | None:intergenic | 60.0% |
| AAGCGGCGCACTAGTGTGGG+AGG | + | chr1.4:58933815-58933834 | None:intergenic | 65.0% | |
| AGCGGCGCACTAGTGTGGGA+GGG | + | chr1.4:58933814-58933833 | None:intergenic | 65.0% | |
| GTATGACCGGCAGCTTGCCG+AGG | - | chr1.4:58933445-58933464 | MS.gene39968:CDS | 65.0% | |
| TGAGGAGCAGAAGCCGTCGC+AGG | + | chr1.4:58931100-58931119 | None:intergenic | 65.0% | |
| TGTGGGAGGGACCTTGAGCC+TGG | + | chr1.4:58933801-58933820 | None:intergenic | 65.0% | |
| ! | ACACTAGCCTGGGAGGACCC+AGG | + | chr1.4:58931070-58931089 | None:intergenic | 65.0% |
| ! | CGAGCGTGCTAGGAGTGTGC+AGG | - | chr1.4:58932246-58932265 | MS.gene39968:intron | 65.0% |
| ! | CGGAGAGCACGCTGAGCGTA+TGG | - | chr1.4:58932053-58932072 | MS.gene39968:intron | 65.0% |
| !! | AACCGGGCGTCGGAAAAGGG+AGG | - | chr1.4:58932000-58932019 | MS.gene39968:intron | 65.0% |
| !! | CGAAGAGGGTGGTGGAGAGC+TGG | - | chr1.4:58931393-58931412 | MS.gene39968:intron | 65.0% |
| CGCATCTCTGGCGCCAGCTG+AGG | + | chr1.4:58933653-58933672 | None:intergenic | 70.0% | |
| GGGAGGACCCAGGTGATCCC+TGG | + | chr1.4:58931060-58931079 | None:intergenic | 70.0% | |
| GGGATCACCTGGGTCCTCCC+AGG | - | chr1.4:58931060-58931079 | MS.gene39968:CDS | 70.0% | |
| GTCCTCCCAGCAGCCTCAGC+TGG | - | chr1.4:58933637-58933656 | MS.gene39968:CDS | 70.0% | |
| TGGCGCCAGCTGAGGCTGCT+GGG | + | chr1.4:58933645-58933664 | None:intergenic | 70.0% | |
| CGCCAGCTGAGGCTGCTGGG+AGG | + | chr1.4:58933642-58933661 | None:intergenic | 75.0% | |
| CTGGCGCCAGCTGAGGCTGC+TGG | + | chr1.4:58933646-58933665 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 58930914 | 58933838 | 58930914 | ID=MS.gene39968 |
| chr1.4 | mRNA | 58930914 | 58933838 | 58930914 | ID=MS.gene39968.t1;Parent=MS.gene39968 |
| chr1.4 | exon | 58933261 | 58933838 | 58933261 | ID=MS.gene39968.t1.exon1;Parent=MS.gene39968.t1 |
| chr1.4 | CDS | 58933261 | 58933838 | 58933261 | ID=cds.MS.gene39968.t1;Parent=MS.gene39968.t1 |
| chr1.4 | exon | 58933059 | 58933185 | 58933059 | ID=MS.gene39968.t1.exon2;Parent=MS.gene39968.t1 |
| chr1.4 | CDS | 58933059 | 58933185 | 58933059 | ID=cds.MS.gene39968.t1;Parent=MS.gene39968.t1 |
| chr1.4 | exon | 58932678 | 58932968 | 58932678 | ID=MS.gene39968.t1.exon3;Parent=MS.gene39968.t1 |
| chr1.4 | CDS | 58932678 | 58932968 | 58932678 | ID=cds.MS.gene39968.t1;Parent=MS.gene39968.t1 |
| chr1.4 | exon | 58932485 | 58932586 | 58932485 | ID=MS.gene39968.t1.exon4;Parent=MS.gene39968.t1 |
| chr1.4 | CDS | 58932485 | 58932586 | 58932485 | ID=cds.MS.gene39968.t1;Parent=MS.gene39968.t1 |
| chr1.4 | exon | 58930914 | 58931312 | 58930914 | ID=MS.gene39968.t1.exon5;Parent=MS.gene39968.t1 |
| chr1.4 | CDS | 58930914 | 58931312 | 58930914 | ID=cds.MS.gene39968.t1;Parent=MS.gene39968.t1 |
| Gene Sequence |
| Protein sequence |
