Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056356.t1 | XP_024627930.1 | 66.4 | 437 | 128 | 3 | 1 | 427 | 1 | 428 | 1.50E-136 | 496.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056356.t1 | A0A396I0R2 | 63.8 | 533 | 124 | 7 | 1 | 511 | 1 | 486 | 2.3e-131 | 478.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056356 | MS.gene39968 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene056356 | MS.gene41320 | 0.900701 | 5.63E-78 | -1.69E-46 |
| MS.gene056356 | MS.gene67622 | 0.828092 | 1.09E-54 | -1.69E-46 |
| MS.gene056356 | MS.gene91719 | 0.857649 | 1.41E-62 | -1.69E-46 |
| MS.gene056356 | MS.gene96918 | 0.870366 | 1.54E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056356.t1 | MTR_0029s0140 | 82.639 | 144 | 25 | 0 | 357 | 500 | 241 | 384 | 7.09e-67 | 221 |
| MS.gene056356.t1 | MTR_0029s0140 | 82.051 | 78 | 14 | 0 | 149 | 226 | 162 | 239 | 3.07e-41 | 152 |
| MS.gene056356.t1 | MTR_2g102860 | 82.734 | 139 | 24 | 0 | 365 | 503 | 13 | 151 | 8.67e-67 | 213 |
| MS.gene056356.t1 | MTR_5g080310 | 77.852 | 149 | 29 | 1 | 359 | 507 | 122 | 266 | 2.59e-65 | 213 |
| MS.gene056356.t1 | MTR_2g020090 | 66.879 | 157 | 51 | 1 | 344 | 500 | 49 | 204 | 8.28e-65 | 210 |
| MS.gene056356.t1 | MTR_4g017750 | 81.119 | 143 | 23 | 1 | 358 | 500 | 110 | 248 | 9.90e-65 | 211 |
| MS.gene056356.t1 | MTR_3g058800 | 71.127 | 142 | 40 | 1 | 359 | 500 | 10 | 150 | 5.55e-63 | 203 |
| MS.gene056356.t1 | MTR_6g463490 | 82.906 | 117 | 20 | 0 | 387 | 503 | 3 | 119 | 4.88e-62 | 199 |
| MS.gene056356.t1 | MTR_1g023240 | 73.418 | 158 | 36 | 1 | 340 | 497 | 17 | 168 | 1.50e-60 | 200 |
| MS.gene056356.t1 | MTR_4g023110 | 70.896 | 134 | 38 | 1 | 357 | 490 | 7 | 139 | 4.95e-58 | 189 |
| MS.gene056356.t1 | MTR_8g027455 | 52.564 | 156 | 65 | 4 | 358 | 507 | 24 | 176 | 3.25e-40 | 150 |
| MS.gene056356.t1 | MTR_1g077650 | 64.423 | 104 | 36 | 1 | 358 | 461 | 46 | 148 | 3.93e-38 | 138 |
| MS.gene056356.t1 | MTR_7g035425 | 37.576 | 165 | 88 | 5 | 165 | 317 | 179 | 340 | 1.00e-23 | 102 |
| MS.gene056356.t1 | MTR_7g037680 | 29.858 | 211 | 116 | 5 | 270 | 479 | 17 | 196 | 4.80e-19 | 87.0 |
| MS.gene056356.t1 | MTR_5g053700 | 80.000 | 50 | 6 | 1 | 451 | 500 | 1 | 46 | 4.43e-18 | 78.6 |
| MS.gene056356.t1 | MTR_2g077640 | 29.032 | 217 | 110 | 7 | 227 | 439 | 34 | 210 | 5.14e-16 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 165 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGATTGAGGGTTAGTCTT+AGG | 0.171025 | 4.1:-34391824 | None:intergenic |
| GCGCTGGTTTAGGCTCTTTC+AGG | 0.183435 | 4.1:+34389351 | MS.gene056356:CDS |
| TGTGGGAGGGACCTTGAGCC+TGG | 0.232485 | 4.1:-34392016 | None:intergenic |
| TGGAGGGATTTGTTGTTGTT+GGG | 0.261186 | 4.1:-34388957 | None:intergenic |
| GTGGAGGGATTTGTTGTTGT+TGG | 0.265730 | 4.1:-34388958 | None:intergenic |
| CTGGCGTCAGCTCAGGCTGC+TGG | 0.280344 | 4.1:-34391860 | None:intergenic |
| CCCGCCTATCTTTGGTGAAT+TGG | 0.291684 | 4.1:+34389603 | MS.gene056356:CDS |
| TATGGCACCATACCTCCTTA+TGG | 0.295998 | 4.1:+34388869 | MS.gene056356:CDS |
| ATAACTGCTATCATCACTTT+TGG | 0.303053 | 4.1:+34389293 | MS.gene056356:CDS |
| CCGGTTCTTCTTTGCTTTGT+CGG | 0.311141 | 4.1:-34389662 | None:intergenic |
| TGGTGAATTGGTTAAGTATT+GGG | 0.326447 | 4.1:+34389615 | MS.gene056356:CDS |
| TAATGCAGACCAAGTGTTCT+TGG | 0.346146 | 4.1:+34389455 | MS.gene056356:intron |
| CTTGCCGAGGCTATTTCTAA+TGG | 0.350981 | 4.1:+34391675 | MS.gene056356:CDS |
| TGGATTGGCCCGCCTATCTT+TGG | 0.360603 | 4.1:+34389595 | MS.gene056356:CDS |
| CCAGTACATCCTGGATATTA+TGG | 0.365206 | 4.1:+34388851 | MS.gene056356:CDS |
| GGATTTGTTGTTGTTGGGGA+AGG | 0.379887 | 4.1:-34388952 | None:intergenic |
| CGCATCTCTGGCGTCAGCTC+AGG | 0.380128 | 4.1:-34391867 | None:intergenic |
| ATGATTGAGGGTTAGTCTTA+GGG | 0.381809 | 4.1:-34391823 | None:intergenic |
| CGAGAATCTCTCGGATAATC+CGG | 0.382446 | 4.1:-34389115 | None:intergenic |
| TCTTCTAGCCAGGGATCACC+TGG | 0.385209 | 4.1:+34388761 | MS.gene056356:CDS |
| CAGCAGCAGCTACACTAGCC+TGG | 0.389520 | 4.1:-34388790 | None:intergenic |
| CCGCTTCCTGCTGTTGCCCT+TGG | 0.392300 | 4.1:-34388642 | None:intergenic |
| ATTTGTTGTTGTTGGGGAAG+GGG | 0.399109 | 4.1:-34388950 | None:intergenic |
| TTGTCTCCTCAAACCGCATA+CGG | 0.400455 | 4.1:-34389558 | None:intergenic |
| ACTGCATCTGCTGCATCTGC+TGG | 0.403740 | 4.1:+34388737 | MS.gene056356:CDS |
| CCGACAAAGCAAAGAAGAAC+CGG | 0.410793 | 4.1:+34389662 | MS.gene056356:CDS |
| GTTGTTGTTGGGGAAGGGGA+AGG | 0.412477 | 4.1:-34388946 | None:intergenic |
| GCTATACGGTCTTGGTAACT+TGG | 0.413255 | 4.1:+34391767 | MS.gene056356:CDS |
| GAAGAACCGGGCATCGGAAA+AGG | 0.414718 | 4.1:+34389675 | MS.gene056356:CDS |
| GATTGCTTCAGCAGCCGGTT+TGG | 0.416531 | 4.1:-34389257 | None:intergenic |
| TGTTGTTGTTGGGGTTGTGG+TGG | 0.418549 | 4.1:-34389016 | None:intergenic |
| TGAATATGGTGGTAAATGAT+AGG | 0.419203 | 4.1:-34388909 | None:intergenic |
| GTTGTTGTTGGGGTTGTGGT+GGG | 0.422252 | 4.1:-34389015 | None:intergenic |
| TGAATAAGCTCCCGCATCTC+TGG | 0.423368 | 4.1:-34391879 | None:intergenic |
| ATGGCACCATACCTCCTTAT+GGG | 0.425132 | 4.1:+34388870 | MS.gene056356:CDS |
| TTGGTGAATTGGTTAAGTAT+TGG | 0.427319 | 4.1:+34389614 | MS.gene056356:CDS |
| AATGCAGACCAAGTGTTCTT+GGG | 0.435174 | 4.1:+34389456 | MS.gene056356:intron |
| TTGCCGAGGCTATTTCTAAT+GGG | 0.436783 | 4.1:+34391676 | MS.gene056356:CDS |
| TGAGCTGACGCCAGAGATGC+GGG | 0.441007 | 4.1:+34391869 | MS.gene056356:CDS |
| TCCTCCTCATCTACCGGATA+AGG | 0.441120 | 4.1:-34392071 | None:intergenic |
| ATCTGCTGGATCTTCTAGCC+AGG | 0.443803 | 4.1:+34388751 | MS.gene056356:CDS |
| CTCGTCGTCGATTCATCTTA+AGG | 0.445948 | 4.1:+34389134 | MS.gene056356:CDS |
| TGGCGTCAGCTCAGGCTGCT+GGG | 0.447507 | 4.1:-34391859 | None:intergenic |
| TTTCTTGTTGGGGCTGTGGT+GGG | 0.448866 | 4.1:-34389042 | None:intergenic |
| AAGAAGAAGGGAAAGCTATA+CGG | 0.450481 | 4.1:+34391753 | MS.gene056356:CDS |
| ACCGGATAAGGCTCAACATT+GGG | 0.453953 | 4.1:-34392059 | None:intergenic |
| CCATAATATCCAGGATGTAC+TGG | 0.458343 | 4.1:-34388851 | None:intergenic |
| GATCTGATTGCTTCAGCAGC+CGG | 0.463673 | 4.1:-34389262 | None:intergenic |
| TTAATTGCTCTTGCGTCAAA+CGG | 0.464925 | 4.1:-34391902 | None:intergenic |
| GGGAGGACCCAGGTGATCCC+TGG | 0.467266 | 4.1:-34388769 | None:intergenic |
| TTAACCAATTCACCAAAGAT+AGG | 0.468585 | 4.1:-34389607 | None:intergenic |
| GATTTGTTGTTGTTGGGGAA+GGG | 0.469554 | 4.1:-34388951 | None:intergenic |
| CACAGCTTCCCAAGAACACT+TGG | 0.469604 | 4.1:-34389464 | None:intergenic |
| AAGAGCCCGTATGCGGTTTG+AGG | 0.473397 | 4.1:+34389552 | MS.gene056356:CDS |
| AGGACCCTTCATCATGATTG+AGG | 0.477246 | 4.1:-34391836 | None:intergenic |
| AAGGGAAAGCTATACGGTCT+TGG | 0.480141 | 4.1:+34391759 | MS.gene056356:CDS |
| GCTCCTCATATGACCTTTGA+CGG | 0.484551 | 4.1:-34391971 | None:intergenic |
| CTAACCCTCAATCATGATGA+AGG | 0.485137 | 4.1:+34391831 | MS.gene056356:CDS |
| GGAGGGATTTGTTGTTGTTG+GGG | 0.486144 | 4.1:-34388956 | None:intergenic |
| TAGCACGCTCGTCGCAGTAT+TGG | 0.486252 | 4.1:-34389913 | None:intergenic |
| TTGATGCAACACTACCCTTC+CGG | 0.489648 | 4.1:-34391800 | None:intergenic |
| CGGAGAGCACGCTGAGCGTA+TGG | 0.490492 | 4.1:+34389732 | MS.gene056356:CDS |
| CGAAGAGGGTGGTGGAGAGC+TGG | 0.490661 | 4.1:+34389072 | MS.gene056356:CDS |
| TCCCAATGTTGAGCCTTATC+CGG | 0.490951 | 4.1:+34392058 | MS.gene056356:CDS |
| AGCAGCAGCTACACTAGCCT+GGG | 0.491398 | 4.1:-34388789 | None:intergenic |
| GGGATCACCTGGGTCCTCCC+AGG | 0.492872 | 4.1:+34388772 | MS.gene056356:CDS |
| TCGTGAAGCTCGTTAATAAA+CGG | 0.493110 | 4.1:-34389866 | None:intergenic |
| GCGGTATAATACTCACTTAG+TGG | 0.494631 | 4.1:+34388661 | MS.gene056356:CDS |
| GCAGTAGAAATGACAGGCAT+CGG | 0.507512 | 4.1:-34388710 | None:intergenic |
| ATTCTTTGACCTTCAACACT+TGG | 0.510375 | 4.1:+34391712 | MS.gene056356:CDS |
| AAGATTTGCTTAACCGTCAA+AGG | 0.511841 | 4.1:+34391958 | MS.gene056356:CDS |
| GTTGTTGTTGGGGAACAAGT+GGG | 0.511970 | 4.1:-34388988 | None:intergenic |
| TGTTGTTGTTGGGGAACAAG+TGG | 0.513250 | 4.1:-34388989 | None:intergenic |
| AAGAACCGGGCATCGGAAAA+GGG | 0.515123 | 4.1:+34389676 | MS.gene056356:CDS |
| AATACTGCGACGAGCGTGCT+AGG | 0.515851 | 4.1:+34389915 | MS.gene056356:CDS |
| AAAAGACCAAGGGCAACAGC+AGG | 0.521432 | 4.1:+34388636 | MS.gene056356:CDS |
| ATGATAGCAGTTATGAATGA+TGG | 0.523463 | 4.1:-34389284 | None:intergenic |
| TTGGGCGTCTGAGGCATTCA+AGG | 0.523650 | 4.1:+34389633 | MS.gene056356:CDS |
| GCTTCAGCAGCCGGTTTGGA+AGG | 0.524446 | 4.1:-34389253 | None:intergenic |
| AGACAAGAAAGCGGCCACAT+TGG | 0.524562 | 4.1:+34389575 | MS.gene056356:CDS |
| GTGGGAGGGACCTTGAGCCT+GGG | 0.524940 | 4.1:-34392015 | None:intergenic |
| TATGGTGGTAAATGATAGGT+CGG | 0.525246 | 4.1:-34388905 | None:intergenic |
| GGAGGAAGGAAGGTCCCATA+AGG | 0.527593 | 4.1:-34388884 | None:intergenic |
| AGAAAGCGGCCACATTGGAT+TGG | 0.531391 | 4.1:+34389580 | MS.gene056356:CDS |
| TACTGGAGGGCACATGTAAG+TGG | 0.532234 | 4.1:-34388834 | None:intergenic |
| GGACCCTTCATCATGATTGA+GGG | 0.536034 | 4.1:-34391835 | None:intergenic |
| AGCAAAGAAGAACCGGGCAT+CGG | 0.536394 | 4.1:+34389669 | MS.gene056356:CDS |
| TCATCATCCTCCTCATCTAC+CGG | 0.536805 | 4.1:-34392077 | None:intergenic |
| CAGTAGAAATGACAGGCATC+GGG | 0.537420 | 4.1:-34388709 | None:intergenic |
| TAACCGTCAAAGGTCATATG+AGG | 0.541572 | 4.1:+34391968 | MS.gene056356:CDS |
| GAAGGTCCCATAAGGAGGTA+TGG | 0.543026 | 4.1:-34388876 | None:intergenic |
| CCAATTCACCAAAGATAGGC+GGG | 0.544604 | 4.1:-34389603 | None:intergenic |
| TTAAAAGCGGCGCACTAGTG+TGG | 0.545514 | 4.1:-34392034 | None:intergenic |
| AAGGTCATATGAGGAGCAGC+TGG | 0.546890 | 4.1:+34391977 | MS.gene056356:CDS |
| TAAAAGCGGCGCACTAGTGT+GGG | 0.551339 | 4.1:-34392033 | None:intergenic |
| CTGAGCTGACGCCAGAGATG+CGG | 0.553348 | 4.1:+34391868 | MS.gene056356:CDS |
| CAAGAAAATGTGGTCGAAGA+GGG | 0.555530 | 4.1:+34389058 | MS.gene056356:CDS |
| AAATAGCCTCGGCAAGCTGC+CGG | 0.555959 | 4.1:-34391668 | None:intergenic |
| ATGTGCCCTCCAGTACATCC+TGG | 0.557262 | 4.1:+34388842 | MS.gene056356:CDS |
| CGAGCGTGCTAGGAGTGTGC+AGG | 0.557294 | 4.1:+34389925 | MS.gene056356:CDS |
| AGTTGCTGGAGACAAGAAGA+AGG | 0.557374 | 4.1:+34391740 | MS.gene056356:CDS |
| TACCGGATAAGGCTCAACAT+TGG | 0.558734 | 4.1:-34392060 | None:intergenic |
| ATAGGCTAGGAGGTTACGTC+GGG | 0.559517 | 4.1:+34389841 | MS.gene056356:intron |
| TTTAAGCAAGCCCAGGCTCA+AGG | 0.561956 | 4.1:+34392005 | MS.gene056356:CDS |
| GGTATGGTGCCATAATATCC+AGG | 0.563962 | 4.1:-34388860 | None:intergenic |
| GGCACAGTTTAAGCAAGCCC+AGG | 0.565829 | 4.1:+34391998 | MS.gene056356:CDS |
| GTAACTTGGCTGCTAACTAC+CGG | 0.570124 | 4.1:+34391781 | MS.gene056356:CDS |
| ACGCTCGTCGCAGTATTGGC+CGG | 0.570260 | 4.1:-34389909 | None:intergenic |
| TGTCTCCTCAAACCGCATAC+GGG | 0.571839 | 4.1:-34389557 | None:intergenic |
| AATGTGGTCGAAGAGGGTGG+TGG | 0.572688 | 4.1:+34389064 | MS.gene056356:CDS |
| ATGATAGGTCGGAGGAAGGA+AGG | 0.575427 | 4.1:-34388894 | None:intergenic |
| GGTTAAGTATTGGGCGTCTG+AGG | 0.577934 | 4.1:+34389624 | MS.gene056356:CDS |
| CTTAGTGGACGCAGCGACAG+AGG | 0.579770 | 4.1:+34388676 | MS.gene056356:CDS |
| TCTGCTGGATCTTCTAGCCA+GGG | 0.582286 | 4.1:+34388752 | MS.gene056356:CDS |
| TTGAACAGGAGGAGTATGAC+CGG | 0.586858 | 4.1:+34391649 | MS.gene056356:intron |
| GAGAATCTCTCGGATAATCC+GGG | 0.586945 | 4.1:-34389114 | None:intergenic |
| GTAAATGATAGGTCGGAGGA+AGG | 0.587191 | 4.1:-34388898 | None:intergenic |
| CCAAGGGCAACAGCAGGAAG+CGG | 0.588028 | 4.1:+34388642 | MS.gene056356:CDS |
| TGAACTTACGAGTTTCCACT+AGG | 0.589440 | 4.1:-34389157 | None:intergenic |
| GGGCACATGTAAGTGGGATG+AGG | 0.589794 | 4.1:-34388827 | None:intergenic |
| GGATGATGAGGATCATGATG+AGG | 0.590861 | 4.1:+34392091 | MS.gene056356:CDS |
| GTAGATGCAGTAGAAATGAC+AGG | 0.591240 | 4.1:-34388716 | None:intergenic |
| AGAGCAATTAACGCAACAGA+TGG | 0.592019 | 4.1:+34391914 | MS.gene056356:CDS |
| CGACAAAGCAAAGAAGAACC+GGG | 0.593138 | 4.1:+34389663 | MS.gene056356:CDS |
| CTTGTGACAAATAGGCTAGG+AGG | 0.600406 | 4.1:+34389831 | MS.gene056356:intron |
| AAGCGGCGCACTAGTGTGGG+AGG | 0.600468 | 4.1:-34392030 | None:intergenic |
| GTATGACCGGCAGCTTGCCG+AGG | 0.601524 | 4.1:+34391662 | MS.gene056356:CDS |
| CGATTCATCTTAAGGCCTAG+TGG | 0.601629 | 4.1:+34389142 | MS.gene056356:CDS |
| ACAAGAAAATGTGGTCGAAG+AGG | 0.610168 | 4.1:+34389057 | MS.gene056356:CDS |
| TACTTAGAAGAGCCCGTATG+CGG | 0.616606 | 4.1:+34389545 | MS.gene056356:CDS |
| GCCTTATCCGGTAGATGAGG+AGG | 0.618778 | 4.1:+34392070 | MS.gene056356:CDS |
| TAATATCCAGGATGTACTGG+AGG | 0.622903 | 4.1:-34388848 | None:intergenic |
| ACCAATTCACCAAAGATAGG+CGG | 0.624368 | 4.1:-34389604 | None:intergenic |
| CTTGGCTGCTAACTACCGGA+AGG | 0.625442 | 4.1:+34391785 | MS.gene056356:CDS |
| CTTCTAGCCAGGGATCACCT+GGG | 0.625749 | 4.1:+34388762 | MS.gene056356:CDS |
| GTTGCTGGAGACAAGAAGAA+GGG | 0.632114 | 4.1:+34391741 | MS.gene056356:CDS |
| AATAGGCTAGGAGGTTACGT+CGG | 0.632889 | 4.1:+34389840 | MS.gene056356:intron |
| AATCGACGACGAGAATCTCT+CGG | 0.634346 | 4.1:-34389124 | None:intergenic |
| GGAAGGAAGGTCCCATAAGG+AGG | 0.636273 | 4.1:-34388881 | None:intergenic |
| TGTGGTGGGACTGAATATGG+TGG | 0.638237 | 4.1:-34388920 | None:intergenic |
| GGTAGATGAGGAGGATGATG+AGG | 0.638477 | 4.1:+34392079 | MS.gene056356:CDS |
| TAACCCTCAATCATGATGAA+GGG | 0.638779 | 4.1:+34391832 | MS.gene056356:CDS |
| TGAGCCTTATCCGGTAGATG+AGG | 0.639385 | 4.1:+34392067 | MS.gene056356:CDS |
| ACACTAGCCTGGGAGGACCC+AGG | 0.643294 | 4.1:-34388779 | None:intergenic |
| AGACCCATTAGAAATAGCCT+CGG | 0.644902 | 4.1:-34391679 | None:intergenic |
| GGTGGTAAATGATAGGTCGG+AGG | 0.646104 | 4.1:-34388902 | None:intergenic |
| ACTGGTGGTTGCTTAAGCAA+CGG | 0.650281 | 4.1:+34389712 | MS.gene056356:CDS |
| CGTCAGCTCAGGCTGCTGGG+AGG | 0.651312 | 4.1:-34391856 | None:intergenic |
| GAAACCTAATGAAAAGACCA+AGG | 0.651417 | 4.1:+34388625 | MS.gene056356:CDS |
| TTGGAAGACATATGGTGATG+TGG | 0.652180 | 4.1:+34389312 | MS.gene056356:CDS |
| TCAACATTGGGACTTAAAAG+CGG | 0.654070 | 4.1:-34392047 | None:intergenic |
| AGCGGCGCACTAGTGTGGGA+GGG | 0.654626 | 4.1:-34392029 | None:intergenic |
| AGCAGCTACACTAGCCTGGG+AGG | 0.655945 | 4.1:-34388786 | None:intergenic |
| TTGGCTGCTAACTACCGGAA+GGG | 0.659168 | 4.1:+34391786 | MS.gene056356:CDS |
| GGAGGATGCATTCACACTGG+TGG | 0.660778 | 4.1:+34389697 | MS.gene056356:CDS |
| GAAAATGTGGTCGAAGAGGG+TGG | 0.661104 | 4.1:+34389061 | MS.gene056356:CDS |
| GCAACAGATGGCAAGTCAAG+CGG | 0.662263 | 4.1:+34391926 | MS.gene056356:CDS |
| ACAGCCCCAACAAGAAAATG+TGG | 0.669400 | 4.1:+34389048 | MS.gene056356:CDS |
| AAGGGAGGATGCATTCACAC+TGG | 0.674246 | 4.1:+34389694 | MS.gene056356:CDS |
| AATATCCAGGATGTACTGGA+GGG | 0.686056 | 4.1:-34388847 | None:intergenic |
| AAACCTAATGAAAAGACCAA+GGG | 0.686235 | 4.1:+34388626 | MS.gene056356:CDS |
| AACCGGGCATCGGAAAAGGG+AGG | 0.698179 | 4.1:+34389679 | MS.gene056356:CDS |
| ACTGGAGGGCACATGTAAGT+GGG | 0.711086 | 4.1:-34388833 | None:intergenic |
| ATAGGCGGGCCAATCCAATG+TGG | 0.757504 | 4.1:-34389589 | None:intergenic |
| GGTTTGAGGAGACAAGAAAG+CGG | 0.763875 | 4.1:+34389566 | MS.gene056356:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATAAACAAAATA+AGG | - | chr4.1:34391542-34391561 | None:intergenic | 10.0% |
| !! | ACAATCAAAATTAAATGATA+TGG | - | chr4.1:34389786-34389805 | None:intergenic | 15.0% |
| !!! | AAAATTGAGGATTTTATAAA+AGG | + | chr4.1:34390454-34390473 | MS.gene056356:intron | 15.0% |
| !!! | TATTTTGTTATTATTTGAAC+AGG | + | chr4.1:34391635-34391654 | MS.gene056356:intron | 15.0% |
| !! | CAGTAAAAATGAAATTGATA+TGG | - | chr4.1:34390705-34390724 | None:intergenic | 20.0% |
| !! | TATAAAGATTAAGAACACAT+TGG | - | chr4.1:34391369-34391388 | None:intergenic | 20.0% |
| !! | TCACTATGAAATATATGATT+TGG | + | chr4.1:34390139-34390158 | MS.gene056356:intron | 20.0% |
| !! | TGAAAAATTTGAGAAAAATC+AGG | + | chr4.1:34390614-34390633 | MS.gene056356:intron | 20.0% |
| !!! | AAGCCTTATAATATCTATTT+AGG | - | chr4.1:34391068-34391087 | None:intergenic | 20.0% |
| !!! | TTTTATTTCTTGTGACAAAT+AGG | + | chr4.1:34389823-34389842 | MS.gene056356:intron | 20.0% |
| !!! | TTTTTTTTAGCTAAGAGTAT+TGG | + | chr4.1:34390337-34390356 | MS.gene056356:intron | 20.0% |
| !!! | TTTTTTTTTAATCCGAATTG+TGG | + | chr4.1:34390042-34390061 | MS.gene056356:intron | 20.0% |
| ! | AAAATATTTAAGGACAGAAC+TGG | - | chr4.1:34391621-34391640 | None:intergenic | 25.0% |
| ! | AAGGAAACTAATCATAAGAA+TGG | - | chr4.1:34391523-34391542 | None:intergenic | 25.0% |
| ! | AATTTCAGTTAAGCAAAAGT+TGG | - | chr4.1:34390075-34390094 | None:intergenic | 25.0% |
| ! | ACAAATTCATAAGCAATAAC+AGG | - | chr4.1:34390940-34390959 | None:intergenic | 25.0% |
| ! | ATATATTTCATAGTGAAGAC+TGG | - | chr4.1:34390135-34390154 | None:intergenic | 25.0% |
| ! | ATTTCAGTTAAGCAAAAGTT+GGG | - | chr4.1:34390074-34390093 | None:intergenic | 25.0% |
| ! | CAAATTCATAAGCAATAACA+GGG | - | chr4.1:34390939-34390958 | None:intergenic | 25.0% |
| ! | GAAAACTATATAGAATCAAG+TGG | - | chr4.1:34391280-34391299 | None:intergenic | 25.0% |
| ! | TAAGACTTATGATAAAACTC+TGG | - | chr4.1:34390551-34390570 | None:intergenic | 25.0% |
| ! | TGGCCTAAATAGATATTATA+AGG | + | chr4.1:34391062-34391081 | MS.gene056356:intron | 25.0% |
| ! | TTTGTCAATCTAATGAAATG+AGG | + | chr4.1:34390420-34390439 | MS.gene056356:intron | 25.0% |
| !! | ACTTTTGCTTAACTGAAATT+TGG | + | chr4.1:34390075-34390094 | MS.gene056356:intron | 25.0% |
| !! | TAGAATTTAGAACTTATCAC+AGG | + | chr4.1:34391334-34391353 | MS.gene056356:intron | 25.0% |
| !!! | GCTTTTTGAAAGAATAGAAA+AGG | + | chr4.1:34390663-34390682 | MS.gene056356:intron | 25.0% |
| !!! | TTTGTTATTATTTGAACAGG+AGG | + | chr4.1:34391638-34391657 | MS.gene056356:intron | 25.0% |
| AAAACTGAGTACTAAGGTAA+GGG | - | chr4.1:34391097-34391116 | None:intergenic | 30.0% | |
| AAACCTAATGAAAAGACCAA+GGG | + | chr4.1:34388626-34388645 | MS.gene056356:CDS | 30.0% | |
| AAAGTCGATTAAAATTACCG+CGG | - | chr4.1:34390895-34390914 | None:intergenic | 30.0% | |
| AAGACTCATAAGTCAACATT+AGG | - | chr4.1:34390850-34390869 | None:intergenic | 30.0% | |
| AAGATTAAGAACACATTGGT+TGG | - | chr4.1:34391365-34391384 | None:intergenic | 30.0% | |
| AATAACAGAGAAACAGTGTA+AGG | - | chr4.1:34391591-34391610 | None:intergenic | 30.0% | |
| ATATCAAGAGTTGCATCTTT+AGG | - | chr4.1:34390576-34390595 | None:intergenic | 30.0% | |
| ATGATAGCAGTTATGAATGA+TGG | - | chr4.1:34389287-34389306 | None:intergenic | 30.0% | |
| CATTACATAGCTCAATTCTT+CGG | - | chr4.1:34390771-34390790 | None:intergenic | 30.0% | |
| GGTTTCTGTCAAAAAAATTG+AGG | + | chr4.1:34390441-34390460 | MS.gene056356:intron | 30.0% | |
| TGAATATGGTGGTAAATGAT+AGG | - | chr4.1:34388912-34388931 | None:intergenic | 30.0% | |
| TGGTGAATTGGTTAAGTATT+GGG | + | chr4.1:34389615-34389634 | MS.gene056356:CDS | 30.0% | |
| TGTGAATTATGATCGATTGT+TGG | + | chr4.1:34390501-34390520 | MS.gene056356:intron | 30.0% | |
| TTAACCAATTCACCAAAGAT+AGG | - | chr4.1:34389610-34389629 | None:intergenic | 30.0% | |
| TTATGATAAAACTCTGGTGA+GGG | - | chr4.1:34390545-34390564 | None:intergenic | 30.0% | |
| TTGGTGAATTGGTTAAGTAT+TGG | + | chr4.1:34389614-34389633 | MS.gene056356:CDS | 30.0% | |
| TTTCAGTTAAGCAAAAGTTG+GGG | - | chr4.1:34390073-34390092 | None:intergenic | 30.0% | |
| TTTGTGTTATAGATGTCTTG+CGG | + | chr4.1:34390955-34390974 | MS.gene056356:intron | 30.0% | |
| ! | ATAACTGCTATCATCACTTT+TGG | + | chr4.1:34389293-34389312 | MS.gene056356:CDS | 30.0% |
| ! | CTCTTGTTCTAGATATGATT+TGG | + | chr4.1:34390104-34390123 | MS.gene056356:intron | 30.0% |
| ! | GTTGTTTAATGATGTTTTCC+CGG | + | chr4.1:34389096-34389115 | MS.gene056356:CDS | 30.0% |
| ! | TTTGATGATACGAAACTGAA+CGG | + | chr4.1:34390233-34390252 | MS.gene056356:intron | 30.0% |
| ! | TTTTCTTGCAATCACATAAC+AGG | - | chr4.1:34391457-34391476 | None:intergenic | 30.0% |
| !! | TTGGTCTTTTCATTAGGTTT+CGG | - | chr4.1:34388626-34388645 | None:intergenic | 30.0% |
| !!! | AACTTTTTTCCAAGTGTTGA+AGG | - | chr4.1:34391724-34391743 | None:intergenic | 30.0% |
| AACACTTGGAAAAAAGTTGC+TGG | + | chr4.1:34391726-34391745 | MS.gene056356:CDS | 35.0% | |
| AACCTACTGCCTTAATTGTA+TGG | + | chr4.1:34390389-34390408 | MS.gene056356:intron | 35.0% | |
| AAGAAGAAGGGAAAGCTATA+CGG | + | chr4.1:34391753-34391772 | MS.gene056356:CDS | 35.0% | |
| AATGACAAACAAGACAGAAC+TGG | - | chr4.1:34390015-34390034 | None:intergenic | 35.0% | |
| AGCATCAGACCATACAATTA+AGG | - | chr4.1:34390401-34390420 | None:intergenic | 35.0% | |
| ATTCTTTGACCTTCAACACT+TGG | + | chr4.1:34391712-34391731 | MS.gene056356:CDS | 35.0% | |
| CAAAACTGAGTACTAAGGTA+AGG | - | chr4.1:34391098-34391117 | None:intergenic | 35.0% | |
| CGAAGAATTGAGCTATGTAA+TGG | + | chr4.1:34390769-34390788 | MS.gene056356:intron | 35.0% | |
| CTTATGATAAAACTCTGGTG+AGG | - | chr4.1:34390546-34390565 | None:intergenic | 35.0% | |
| GAAACCTAATGAAAAGACCA+AGG | + | chr4.1:34388625-34388644 | MS.gene056356:CDS | 35.0% | |
| GAAACGCACAAAAATAAGTC+CGG | + | chr4.1:34389890-34389909 | MS.gene056356:CDS | 35.0% | |
| GGCAAGTTGTAATTGCTAAT+AGG | - | chr4.1:34391431-34391450 | None:intergenic | 35.0% | |
| TAACCCTCAATCATGATGAA+GGG | + | chr4.1:34391832-34391851 | MS.gene056356:CDS | 35.0% | |
| TATGGTGGTAAATGATAGGT+CGG | - | chr4.1:34388908-34388927 | None:intergenic | 35.0% | |
| TCAACATTGGGACTTAAAAG+CGG | - | chr4.1:34392050-34392069 | None:intergenic | 35.0% | |
| TCGTGAAGCTCGTTAATAAA+CGG | - | chr4.1:34389869-34389888 | None:intergenic | 35.0% | |
| TTAATTGCTCTTGCGTCAAA+CGG | - | chr4.1:34391905-34391924 | None:intergenic | 35.0% | |
| TTGCAATCACATAACAGGTT+TGG | - | chr4.1:34391452-34391471 | None:intergenic | 35.0% | |
| TTTCTTGTGACAAATAGGCT+AGG | + | chr4.1:34389828-34389847 | MS.gene056356:intron | 35.0% | |
| ! | AAGATTTGCTTAACCGTCAA+AGG | + | chr4.1:34391958-34391977 | MS.gene056356:CDS | 35.0% |
| ! | ATGATAATGAAAAAGAGCGC+TGG | + | chr4.1:34389335-34389354 | MS.gene056356:CDS | 35.0% |
| ! | TACCTTAGTACTCAGTTTTG+TGG | + | chr4.1:34391098-34391117 | MS.gene056356:intron | 35.0% |
| ! | TTCGACCACATTTTCTTGTT+GGG | - | chr4.1:34389056-34389075 | None:intergenic | 35.0% |
| ! | TTTTAATCCGAATTGTGGTC+TGG | + | chr4.1:34390047-34390066 | MS.gene056356:intron | 35.0% |
| !! | ACCTTAGTACTCAGTTTTGT+GGG | + | chr4.1:34391099-34391118 | MS.gene056356:intron | 35.0% |
| !! | ATGATTGAGGGTTAGTCTTA+GGG | - | chr4.1:34391826-34391845 | None:intergenic | 35.0% |
| !! | CATCACTTTTGGAAGACATA+TGG | + | chr4.1:34389304-34389323 | MS.gene056356:CDS | 35.0% |
| !! | CGACTTTGTTGATTCTTACA+AGG | + | chr4.1:34390908-34390927 | MS.gene056356:intron | 35.0% |
| !! | GTTCTGTCTTGTTTGTCATT+TGG | + | chr4.1:34390015-34390034 | MS.gene056356:intron | 35.0% |
| !!! | GCACTATTTTTGTTGCAGTT+TGG | + | chr4.1:34389987-34390006 | MS.gene056356:intron | 35.0% |
| AATATCCAGGATGTACTGGA+GGG | - | chr4.1:34388850-34388869 | None:intergenic | 40.0% | |
| AATGCAGACCAAGTGTTCTT+GGG | + | chr4.1:34389456-34389475 | MS.gene056356:intron | 40.0% | |
| ACAAGAAAATGTGGTCGAAG+AGG | + | chr4.1:34389057-34389076 | MS.gene056356:CDS | 40.0% | |
| ACAATTAAGGCAGTAGGTTC+TGG | - | chr4.1:34390388-34390407 | None:intergenic | 40.0% | |
| ACCAATTCACCAAAGATAGG+CGG | - | chr4.1:34389607-34389626 | None:intergenic | 40.0% | |
| AGACCCATTAGAAATAGCCT+CGG | - | chr4.1:34391682-34391701 | None:intergenic | 40.0% | |
| AGAGCAATTAACGCAACAGA+TGG | + | chr4.1:34391914-34391933 | MS.gene056356:CDS | 40.0% | |
| ATTTAAGGACAGAACTGGCA+AGG | - | chr4.1:34391616-34391635 | None:intergenic | 40.0% | |
| CAAGAAAATGTGGTCGAAGA+GGG | + | chr4.1:34389058-34389077 | MS.gene056356:CDS | 40.0% | |
| CAATTAAGGCAGTAGGTTCT+GGG | - | chr4.1:34390387-34390406 | None:intergenic | 40.0% | |
| CCAGTACATCCTGGATATTA+TGG | + | chr4.1:34388851-34388870 | MS.gene056356:CDS | 40.0% | |
| CCATAATATCCAGGATGTAC+TGG | - | chr4.1:34388854-34388873 | None:intergenic | 40.0% | |
| CTAACCCTCAATCATGATGA+AGG | + | chr4.1:34391831-34391850 | MS.gene056356:CDS | 40.0% | |
| GAAGGTGATGAATGATACAG+AGG | - | chr4.1:34390994-34391013 | None:intergenic | 40.0% | |
| GACCATACAATTAAGGCAGT+AGG | - | chr4.1:34390394-34390413 | None:intergenic | 40.0% | |
| GCGGTATAATACTCACTTAG+TGG | + | chr4.1:34388661-34388680 | MS.gene056356:CDS | 40.0% | |
| GTAGATGCAGTAGAAATGAC+AGG | - | chr4.1:34388719-34388738 | None:intergenic | 40.0% | |
| GTCTGTAACAAGCTTAAGTG+TGG | + | chr4.1:34390186-34390205 | MS.gene056356:intron | 40.0% | |
| TAACCGTCAAAGGTCATATG+AGG | + | chr4.1:34391968-34391987 | MS.gene056356:CDS | 40.0% | |
| TAATATCCAGGATGTACTGG+AGG | - | chr4.1:34388851-34388870 | None:intergenic | 40.0% | |
| TAATGCAGACCAAGTGTTCT+TGG | + | chr4.1:34389455-34389474 | MS.gene056356:intron | 40.0% | |
| TCCCACAAAACTGAGTACTA+AGG | - | chr4.1:34391103-34391122 | None:intergenic | 40.0% | |
| TCTATTTAGGCCATGTCTCT+AGG | - | chr4.1:34391055-34391074 | None:intergenic | 40.0% | |
| TGAACTTACGAGTTTCCACT+AGG | - | chr4.1:34389160-34389179 | None:intergenic | 40.0% | |
| TGTCTCTAGGCAATGAAGAA+CGG | - | chr4.1:34391042-34391061 | None:intergenic | 40.0% | |
| TTAAAATTACCGCGGACAGA+TGG | - | chr4.1:34390887-34390906 | None:intergenic | 40.0% | |
| TTCTTCATTGCCTAGAGACA+TGG | + | chr4.1:34391042-34391061 | MS.gene056356:intron | 40.0% | |
| TTTCATAGTGAAGACTGGCA+AGG | - | chr4.1:34390130-34390149 | None:intergenic | 40.0% | |
| ! | CTTCGACCACATTTTCTTGT+TGG | - | chr4.1:34389057-34389076 | None:intergenic | 40.0% |
| ! | CTTGTCGTATCTCTCAGTTT+TGG | + | chr4.1:34389952-34389971 | MS.gene056356:intron | 40.0% |
| ! | GTCTTTTCATTAGGTTTCGG+AGG | - | chr4.1:34388623-34388642 | None:intergenic | 40.0% |
| ! | TCGACCACATTTTCTTGTTG+GGG | - | chr4.1:34389055-34389074 | None:intergenic | 40.0% |
| ! | TGTGGTAAGCTTTAGCTCAA+GGG | + | chr4.1:34390204-34390223 | MS.gene056356:intron | 40.0% |
| ! | TTGGAAGACATATGGTGATG+TGG | + | chr4.1:34389312-34389331 | MS.gene056356:CDS | 40.0% |
| !! | AGAGTATTGGCTCCAAAAGT+TGG | + | chr4.1:34390350-34390369 | MS.gene056356:intron | 40.0% |
| !! | ATGAAAAAGAGCGCTGGTTT+AGG | + | chr4.1:34389341-34389360 | MS.gene056356:CDS | 40.0% |
| !! | ATTTGTTGTTGTTGGGGAAG+GGG | - | chr4.1:34388953-34388972 | None:intergenic | 40.0% |
| !! | CATGATTGAGGGTTAGTCTT+AGG | - | chr4.1:34391827-34391846 | None:intergenic | 40.0% |
| !! | GAGTATTGGCTCCAAAAGTT+GGG | + | chr4.1:34390351-34390370 | MS.gene056356:intron | 40.0% |
| !! | GATTTGTTGTTGTTGGGGAA+GGG | - | chr4.1:34388954-34388973 | None:intergenic | 40.0% |
| !! | TGGAGGGATTTGTTGTTGTT+GGG | - | chr4.1:34388960-34388979 | None:intergenic | 40.0% |
| !! | TTGCCCTTGGTCTTTTCATT+AGG | - | chr4.1:34388632-34388651 | None:intergenic | 40.0% |
| !! | TTGCCGAGGCTATTTCTAAT+GGG | + | chr4.1:34391676-34391695 | MS.gene056356:CDS | 40.0% |
| !! | TTTTGTGGTGGGACTGAATA+TGG | - | chr4.1:34388926-34388945 | None:intergenic | 40.0% |
| !!! | TGGTGGGTTTTGTTGTTGTT+GGG | - | chr4.1:34389002-34389021 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGTTG+TGG | - | chr4.1:34389022-34389041 | None:intergenic | 40.0% |
| AAGGGAAAGCTATACGGTCT+TGG | + | chr4.1:34391759-34391778 | MS.gene056356:CDS | 45.0% | |
| AATAGGCTAGGAGGTTACGT+CGG | + | chr4.1:34389840-34389859 | MS.gene056356:intron | 45.0% | |
| AATCACAATCCTCCATGCTC+AGG | - | chr4.1:34391147-34391166 | None:intergenic | 45.0% | |
| AATCGACGACGAGAATCTCT+CGG | - | chr4.1:34389127-34389146 | None:intergenic | 45.0% | |
| ACAGCCCCAACAAGAAAATG+TGG | + | chr4.1:34389048-34389067 | MS.gene056356:CDS | 45.0% | |
| ACCGGATAAGGCTCAACATT+GGG | - | chr4.1:34392062-34392081 | None:intergenic | 45.0% | |
| ACTGGTGGTTGCTTAAGCAA+CGG | + | chr4.1:34389712-34389731 | MS.gene056356:CDS | 45.0% | |
| AGGACCCTTCATCATGATTG+AGG | - | chr4.1:34391839-34391858 | None:intergenic | 45.0% | |
| AGTTGCTGGAGACAAGAAGA+AGG | + | chr4.1:34391740-34391759 | MS.gene056356:CDS | 45.0% | |
| ATGGCACCATACCTCCTTAT+GGG | + | chr4.1:34388870-34388889 | MS.gene056356:CDS | 45.0% | |
| CAGTAGAAATGACAGGCATC+GGG | - | chr4.1:34388712-34388731 | None:intergenic | 45.0% | |
| CCAATTCACCAAAGATAGGC+GGG | - | chr4.1:34389606-34389625 | None:intergenic | 45.0% | |
| CCGACAAAGCAAAGAAGAAC+CGG | + | chr4.1:34389662-34389681 | MS.gene056356:CDS | 45.0% | |
| CCGGTTCTTCTTTGCTTTGT+CGG | - | chr4.1:34389665-34389684 | None:intergenic | 45.0% | |
| CGACAAAGCAAAGAAGAACC+GGG | + | chr4.1:34389663-34389682 | MS.gene056356:CDS | 45.0% | |
| CGAGAATCTCTCGGATAATC+CGG | - | chr4.1:34389118-34389137 | None:intergenic | 45.0% | |
| CGATTCATCTTAAGGCCTAG+TGG | + | chr4.1:34389142-34389161 | MS.gene056356:CDS | 45.0% | |
| CTTGTGACAAATAGGCTAGG+AGG | + | chr4.1:34389831-34389850 | MS.gene056356:intron | 45.0% | |
| GAGAATCTCTCGGATAATCC+GGG | - | chr4.1:34389117-34389136 | None:intergenic | 45.0% | |
| GATAAAACTCTGGTGAGGGA+AGG | - | chr4.1:34390541-34390560 | None:intergenic | 45.0% | |
| GCAGTAGAAATGACAGGCAT+CGG | - | chr4.1:34388713-34388732 | None:intergenic | 45.0% | |
| GCTCCTCATATGACCTTTGA+CGG | - | chr4.1:34391974-34391993 | None:intergenic | 45.0% | |
| GGACCCTTCATCATGATTGA+GGG | - | chr4.1:34391838-34391857 | None:intergenic | 45.0% | |
| GGATGATGAGGATCATGATG+AGG | + | chr4.1:34392091-34392110 | MS.gene056356:CDS | 45.0% | |
| GGTTTGAGGAGACAAGAAAG+CGG | + | chr4.1:34389566-34389585 | MS.gene056356:CDS | 45.0% | |
| GTAAATGATAGGTCGGAGGA+AGG | - | chr4.1:34388901-34388920 | None:intergenic | 45.0% | |
| GTAACTTGGCTGCTAACTAC+CGG | + | chr4.1:34391781-34391800 | MS.gene056356:CDS | 45.0% | |
| GTTGCTGGAGACAAGAAGAA+GGG | + | chr4.1:34391741-34391760 | MS.gene056356:CDS | 45.0% | |
| TACCGGATAAGGCTCAACAT+TGG | - | chr4.1:34392063-34392082 | None:intergenic | 45.0% | |
| TACTTAGAAGAGCCCGTATG+CGG | + | chr4.1:34389545-34389564 | MS.gene056356:CDS | 45.0% | |
| TAGATGTCTTGCGGCAACTT+TGG | + | chr4.1:34390964-34390983 | MS.gene056356:intron | 45.0% | |
| TATGGCACCATACCTCCTTA+TGG | + | chr4.1:34388869-34388888 | MS.gene056356:CDS | 45.0% | |
| TCATCATCCTCCTCATCTAC+CGG | - | chr4.1:34392080-34392099 | None:intergenic | 45.0% | |
| TTGATGCAACACTACCCTTC+CGG | - | chr4.1:34391803-34391822 | None:intergenic | 45.0% | |
| TTGTCTCCTCAAACCGCATA+CGG | - | chr4.1:34389561-34389580 | None:intergenic | 45.0% | |
| TTGTGATATCAGCAGCAACG+AGG | - | chr4.1:34390795-34390814 | None:intergenic | 45.0% | |
| ! | ACATTTTCTTGTTGGGGCTG+TGG | - | chr4.1:34389049-34389068 | None:intergenic | 45.0% |
| ! | ATTGGCTCCAAAAGTTGGGT+GGG | + | chr4.1:34390355-34390374 | MS.gene056356:intron | 45.0% |
| ! | CAGCTTTTTGCCTTCCAAAC+CGG | + | chr4.1:34389243-34389262 | MS.gene056356:intron | 45.0% |
| ! | GACATTTCCCACCCAACTTT+TGG | - | chr4.1:34390365-34390384 | None:intergenic | 45.0% |
| ! | GCTATACGGTCTTGGTAACT+TGG | + | chr4.1:34391767-34391786 | MS.gene056356:CDS | 45.0% |
| ! | GTGTGGTAAGCTTTAGCTCA+AGG | + | chr4.1:34390203-34390222 | MS.gene056356:intron | 45.0% |
| ! | GTTGTTGTTGGGGAACAAGT+GGG | - | chr4.1:34388991-34389010 | None:intergenic | 45.0% |
| ! | TCCCAATGTTGAGCCTTATC+CGG | + | chr4.1:34392058-34392077 | MS.gene056356:CDS | 45.0% |
| ! | TGTTGTTGTTGGGGAACAAG+TGG | - | chr4.1:34388992-34389011 | None:intergenic | 45.0% |
| ! | TTGAACAGGAGGAGTATGAC+CGG | + | chr4.1:34391649-34391668 | MS.gene056356:intron | 45.0% |
| !! | CTCGTCGTCGATTCATCTTA+AGG | + | chr4.1:34389134-34389153 | MS.gene056356:CDS | 45.0% |
| !! | CTTGCCGAGGCTATTTCTAA+TGG | + | chr4.1:34391675-34391694 | MS.gene056356:CDS | 45.0% |
| !! | GGAGGGATTTGTTGTTGTTG+GGG | - | chr4.1:34388959-34388978 | None:intergenic | 45.0% |
| !! | GGATTTGTTGTTGTTGGGGA+AGG | - | chr4.1:34388955-34388974 | None:intergenic | 45.0% |
| !! | GGTATGGTGCCATAATATCC+AGG | - | chr4.1:34388863-34388882 | None:intergenic | 45.0% |
| !! | GTGGAGGGATTTGTTGTTGT+TGG | - | chr4.1:34388961-34388980 | None:intergenic | 45.0% |
| !! | TATTGGCTCCAAAAGTTGGG+TGG | + | chr4.1:34390354-34390373 | MS.gene056356:intron | 45.0% |
| !!! | ACAAGTGGGTTTTGTTGTGG+AGG | - | chr4.1:34388977-34388996 | None:intergenic | 45.0% |
| !!! | CAAGTGGGTTTTGTTGTGGA+GGG | - | chr4.1:34388976-34388995 | None:intergenic | 45.0% |
| !!! | GGAACAAGTGGGTTTTGTTG+TGG | - | chr4.1:34388980-34388999 | None:intergenic | 45.0% |
| !!! | GGTGGGTTTTGTTGTTGTTG+GGG | - | chr4.1:34389001-34389020 | None:intergenic | 45.0% |
| !!! | GTGGTGGGTTTTGTTGTTGT+TGG | - | chr4.1:34389003-34389022 | None:intergenic | 45.0% |
| !! | AAATAATAACAAAATATTTA+AGG | - | chr4.1:34391631-34391650 | None:intergenic | 5.0% |
| AAAAGACCAAGGGCAACAGC+AGG | + | chr4.1:34388636-34388655 | MS.gene056356:CDS | 50.0% | |
| AAGGGAGGATGCATTCACAC+TGG | + | chr4.1:34389694-34389713 | MS.gene056356:CDS | 50.0% | |
| AAGGTCATATGAGGAGCAGC+TGG | + | chr4.1:34391977-34391996 | MS.gene056356:CDS | 50.0% | |
| AATTACCGCGGACAGATGGT+TGG | - | chr4.1:34390883-34390902 | None:intergenic | 50.0% | |
| AGAAAGCGGCCACATTGGAT+TGG | + | chr4.1:34389580-34389599 | MS.gene056356:CDS | 50.0% | |
| AGACAAGAAAGCGGCCACAT+TGG | + | chr4.1:34389575-34389594 | MS.gene056356:CDS | 50.0% | |
| AGCAAAGAAGAACCGGGCAT+CGG | + | chr4.1:34389669-34389688 | MS.gene056356:CDS | 50.0% | |
| ATAGGCTAGGAGGTTACGTC+GGG | + | chr4.1:34389841-34389860 | MS.gene056356:intron | 50.0% | |
| ATCTGCTGGATCTTCTAGCC+AGG | + | chr4.1:34388751-34388770 | MS.gene056356:CDS | 50.0% | |
| ATGATAGGTCGGAGGAAGGA+AGG | - | chr4.1:34388897-34388916 | None:intergenic | 50.0% | |
| CACAGCTTCCCAAGAACACT+TGG | - | chr4.1:34389467-34389486 | None:intergenic | 50.0% | |
| CCCGCCTATCTTTGGTGAAT+TGG | + | chr4.1:34389603-34389622 | MS.gene056356:CDS | 50.0% | |
| CCTTCATCATGACACGTGAG+CGG | + | chr4.1:34391009-34391028 | MS.gene056356:intron | 50.0% | |
| GAAAATGTGGTCGAAGAGGG+TGG | + | chr4.1:34389061-34389080 | MS.gene056356:CDS | 50.0% | |
| GAAGGTCCCATAAGGAGGTA+TGG | - | chr4.1:34388879-34388898 | None:intergenic | 50.0% | |
| GATCTGATTGCTTCAGCAGC+CGG | - | chr4.1:34389265-34389284 | None:intergenic | 50.0% | |
| GCAACAGATGGCAAGTCAAG+CGG | + | chr4.1:34391926-34391945 | MS.gene056356:CDS | 50.0% | |
| GGTAGATGAGGAGGATGATG+AGG | + | chr4.1:34392079-34392098 | MS.gene056356:CDS | 50.0% | |
| GGTGGTAAATGATAGGTCGG+AGG | - | chr4.1:34388905-34388924 | None:intergenic | 50.0% | |
| TAAAAGCGGCGCACTAGTGT+GGG | - | chr4.1:34392036-34392055 | None:intergenic | 50.0% | |
| TCCTCCTCATCTACCGGATA+AGG | - | chr4.1:34392074-34392093 | None:intergenic | 50.0% | |
| TCTGCTGGATCTTCTAGCCA+GGG | + | chr4.1:34388752-34388771 | MS.gene056356:CDS | 50.0% | |
| TCTGGTGAGGGAAGGAGTTA+GGG | - | chr4.1:34390533-34390552 | None:intergenic | 50.0% | |
| TGAATAAGCTCCCGCATCTC+TGG | - | chr4.1:34391882-34391901 | None:intergenic | 50.0% | |
| TGTCTCCTCAAACCGCATAC+GGG | - | chr4.1:34389560-34389579 | None:intergenic | 50.0% | |
| TTAAAAGCGGCGCACTAGTG+TGG | - | chr4.1:34392037-34392056 | None:intergenic | 50.0% | |
| TTGGCTGCTAACTACCGGAA+GGG | + | chr4.1:34391786-34391805 | MS.gene056356:CDS | 50.0% | |
| TTTAAGCAAGCCCAGGCTCA+AGG | + | chr4.1:34392005-34392024 | MS.gene056356:CDS | 50.0% | |
| TTTCTTGTTGGGGCTGTGGT+GGG | - | chr4.1:34389045-34389064 | None:intergenic | 50.0% | |
| ! | ACTGGAGGGCACATGTAAGT+GGG | - | chr4.1:34388836-34388855 | None:intergenic | 50.0% |
| ! | GTTGTTGTTGGGGTTGTGGT+GGG | - | chr4.1:34389018-34389037 | None:intergenic | 50.0% |
| ! | TACTGGAGGGCACATGTAAG+TGG | - | chr4.1:34388837-34388856 | None:intergenic | 50.0% |
| ! | TGAGCCTTATCCGGTAGATG+AGG | + | chr4.1:34392067-34392086 | MS.gene056356:CDS | 50.0% |
| ! | TGTGGTGGGACTGAATATGG+TGG | - | chr4.1:34388923-34388942 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGTTGTGG+TGG | - | chr4.1:34389019-34389038 | None:intergenic | 50.0% |
| ! | TTTTCTTGTTGGGGCTGTGG+TGG | - | chr4.1:34389046-34389065 | None:intergenic | 50.0% |
| !! | AAGAACCGGGCATCGGAAAA+GGG | + | chr4.1:34389676-34389695 | MS.gene056356:CDS | 50.0% |
| !! | GAAGGGGAAGGTTTTGTGGT+GGG | - | chr4.1:34388937-34388956 | None:intergenic | 50.0% |
| !! | GGTTAAGTATTGGGCGTCTG+AGG | + | chr4.1:34389624-34389643 | MS.gene056356:CDS | 50.0% |
| !!! | CAGAGCTGCTGCACGTTTTT+TGG | + | chr4.1:34389519-34389538 | MS.gene056356:CDS | 50.0% |
| AAATAGCCTCGGCAAGCTGC+CGG | - | chr4.1:34391671-34391690 | None:intergenic | 55.0% | |
| AAGAGCCCGTATGCGGTTTG+AGG | + | chr4.1:34389552-34389571 | MS.gene056356:CDS | 55.0% | |
| AATACTGCGACGAGCGTGCT+AGG | + | chr4.1:34389915-34389934 | MS.gene056356:CDS | 55.0% | |
| AATGTGGTCGAAGAGGGTGG+TGG | + | chr4.1:34389064-34389083 | MS.gene056356:CDS | 55.0% | |
| ACTGCATCTGCTGCATCTGC+TGG | + | chr4.1:34388737-34388756 | MS.gene056356:CDS | 55.0% | |
| ATAGGCGGGCCAATCCAATG+TGG | - | chr4.1:34389592-34389611 | None:intergenic | 55.0% | |
| ATGTGCCCTCCAGTACATCC+TGG | + | chr4.1:34388842-34388861 | MS.gene056356:CDS | 55.0% | |
| CCGCTCACGTGTCATGATGA+AGG | - | chr4.1:34391012-34391031 | None:intergenic | 55.0% | |
| CTCTGGTGAGGGAAGGAGTT+AGG | - | chr4.1:34390534-34390553 | None:intergenic | 55.0% | |
| CTTCTAGCCAGGGATCACCT+GGG | + | chr4.1:34388762-34388781 | MS.gene056356:CDS | 55.0% | |
| CTTGGCTGCTAACTACCGGA+AGG | + | chr4.1:34391785-34391804 | MS.gene056356:CDS | 55.0% | |
| GATTGCTTCAGCAGCCGGTT+TGG | - | chr4.1:34389260-34389279 | None:intergenic | 55.0% | |
| GCCTTATCCGGTAGATGAGG+AGG | + | chr4.1:34392070-34392089 | MS.gene056356:CDS | 55.0% | |
| GGAAGGAAGGTCCCATAAGG+AGG | - | chr4.1:34388884-34388903 | None:intergenic | 55.0% | |
| GGAGGAAGGAAGGTCCCATA+AGG | - | chr4.1:34388887-34388906 | None:intergenic | 55.0% | |
| GGAGGATGCATTCACACTGG+TGG | + | chr4.1:34389697-34389716 | MS.gene056356:CDS | 55.0% | |
| GGCACAGTTTAAGCAAGCCC+AGG | + | chr4.1:34391998-34392017 | MS.gene056356:CDS | 55.0% | |
| GGGCACATGTAAGTGGGATG+AGG | - | chr4.1:34388830-34388849 | None:intergenic | 55.0% | |
| GTTGGGGCCAGACCACAATT+CGG | - | chr4.1:34390057-34390076 | None:intergenic | 55.0% | |
| TAGCACGCTCGTCGCAGTAT+TGG | - | chr4.1:34389916-34389935 | None:intergenic | 55.0% | |
| TCTTCTAGCCAGGGATCACC+TGG | + | chr4.1:34388761-34388780 | MS.gene056356:CDS | 55.0% | |
| TGCATCCAACCATCTGTCCG+CGG | + | chr4.1:34390875-34390894 | MS.gene056356:intron | 55.0% | |
| ! | AGCAGCAGCTACACTAGCCT+GGG | - | chr4.1:34388792-34388811 | None:intergenic | 55.0% |
| ! | ATCCTCCCTTTTCCGATGCC+CGG | - | chr4.1:34389684-34389703 | None:intergenic | 55.0% |
| ! | GTTGTTGTTGGGGAAGGGGA+AGG | - | chr4.1:34388949-34388968 | None:intergenic | 55.0% |
| ! | TGGGGAAGGGGAAGGTTTTG+TGG | - | chr4.1:34388941-34388960 | None:intergenic | 55.0% |
| ! | TTGGGCGTCTGAGGCATTCA+AGG | + | chr4.1:34389633-34389652 | MS.gene056356:CDS | 55.0% |
| !! | GAAGAACCGGGCATCGGAAA+AGG | + | chr4.1:34389675-34389694 | MS.gene056356:CDS | 55.0% |
| !! | GCGCTGGTTTAGGCTCTTTC+AGG | + | chr4.1:34389351-34389370 | MS.gene056356:CDS | 55.0% |
| !! | GGAAGGGGAAGGTTTTGTGG+TGG | - | chr4.1:34388938-34388957 | None:intergenic | 55.0% |
| !! | TGGATTGGCCCGCCTATCTT+TGG | + | chr4.1:34389595-34389614 | MS.gene056356:CDS | 55.0% |
| CAGCAGCAGCTACACTAGCC+TGG | - | chr4.1:34388793-34388812 | None:intergenic | 60.0% | |
| CCAAGGGCAACAGCAGGAAG+CGG | + | chr4.1:34388642-34388661 | MS.gene056356:CDS | 60.0% | |
| CTCCATGCTCAGGTCAGACG+CGG | - | chr4.1:34391137-34391156 | None:intergenic | 60.0% | |
| CTGAGCTGACGCCAGAGATG+CGG | + | chr4.1:34391868-34391887 | MS.gene056356:CDS | 60.0% | |
| TGAGCTGACGCCAGAGATGC+GGG | + | chr4.1:34391869-34391888 | MS.gene056356:CDS | 60.0% | |
| ! | AGCAGCTACACTAGCCTGGG+AGG | - | chr4.1:34388789-34388808 | None:intergenic | 60.0% |
| ! | CTTAGTGGACGCAGCGACAG+AGG | + | chr4.1:34388676-34388695 | MS.gene056356:CDS | 60.0% |
| !! | AACCGGGCATCGGAAAAGGG+AGG | + | chr4.1:34389679-34389698 | MS.gene056356:CDS | 60.0% |
| !! | ACGCTCGTCGCAGTATTGGC+CGG | - | chr4.1:34389912-34389931 | None:intergenic | 60.0% |
| !! | GCTTCAGCAGCCGGTTTGGA+AGG | - | chr4.1:34389256-34389275 | None:intergenic | 60.0% |
| AAGCGGCGCACTAGTGTGGG+AGG | - | chr4.1:34392033-34392052 | None:intergenic | 65.0% | |
| AGCCGCGTCTGACCTGAGCA+TGG | + | chr4.1:34391132-34391151 | MS.gene056356:intron | 65.0% | |
| AGCGGCGCACTAGTGTGGGA+GGG | - | chr4.1:34392032-34392051 | None:intergenic | 65.0% | |
| CCGCTTCCTGCTGTTGCCCT+TGG | - | chr4.1:34388645-34388664 | None:intergenic | 65.0% | |
| CGCATCTCTGGCGTCAGCTC+AGG | - | chr4.1:34391870-34391889 | None:intergenic | 65.0% | |
| CGCGTCTGACCTGAGCATGG+AGG | + | chr4.1:34391135-34391154 | MS.gene056356:intron | 65.0% | |
| GTATGACCGGCAGCTTGCCG+AGG | + | chr4.1:34391662-34391681 | MS.gene056356:CDS | 65.0% | |
| GTGGGAGGGACCTTGAGCCT+GGG | - | chr4.1:34392018-34392037 | None:intergenic | 65.0% | |
| TGGCGTCAGCTCAGGCTGCT+GGG | - | chr4.1:34391862-34391881 | None:intergenic | 65.0% | |
| TGTGGGAGGGACCTTGAGCC+TGG | - | chr4.1:34392019-34392038 | None:intergenic | 65.0% | |
| ! | ACACTAGCCTGGGAGGACCC+AGG | - | chr4.1:34388782-34388801 | None:intergenic | 65.0% |
| ! | CGAGCGTGCTAGGAGTGTGC+AGG | + | chr4.1:34389925-34389944 | MS.gene056356:CDS | 65.0% |
| ! | CGGAGAGCACGCTGAGCGTA+TGG | + | chr4.1:34389732-34389751 | MS.gene056356:CDS | 65.0% |
| !! | CGAAGAGGGTGGTGGAGAGC+TGG | + | chr4.1:34389072-34389091 | MS.gene056356:CDS | 65.0% |
| CGTCAGCTCAGGCTGCTGGG+AGG | - | chr4.1:34391859-34391878 | None:intergenic | 70.0% | |
| CTGGCGTCAGCTCAGGCTGC+TGG | - | chr4.1:34391863-34391882 | None:intergenic | 70.0% | |
| GGGAGGACCCAGGTGATCCC+TGG | - | chr4.1:34388772-34388791 | None:intergenic | 70.0% | |
| GGGATCACCTGGGTCCTCCC+AGG | + | chr4.1:34388772-34388791 | MS.gene056356:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 34388617 | 34392118 | 34388617 | ID=MS.gene056356 |
| chr4.1 | mRNA | 34388617 | 34392118 | 34388617 | ID=MS.gene056356.t1;Parent=MS.gene056356 |
| chr4.1 | exon | 34388617 | 34389170 | 34388617 | ID=MS.gene056356.t1.exon1;Parent=MS.gene056356.t1 |
| chr4.1 | CDS | 34388617 | 34389170 | 34388617 | ID=cds.MS.gene056356.t1;Parent=MS.gene056356.t1 |
| chr4.1 | exon | 34389246 | 34389372 | 34389246 | ID=MS.gene056356.t1.exon2;Parent=MS.gene056356.t1 |
| chr4.1 | CDS | 34389246 | 34389372 | 34389246 | ID=cds.MS.gene056356.t1;Parent=MS.gene056356.t1 |
| chr4.1 | exon | 34389463 | 34389753 | 34389463 | ID=MS.gene056356.t1.exon3;Parent=MS.gene056356.t1 |
| chr4.1 | CDS | 34389463 | 34389753 | 34389463 | ID=cds.MS.gene056356.t1;Parent=MS.gene056356.t1 |
| chr4.1 | exon | 34389845 | 34389946 | 34389845 | ID=MS.gene056356.t1.exon4;Parent=MS.gene056356.t1 |
| chr4.1 | CDS | 34389845 | 34389946 | 34389845 | ID=cds.MS.gene056356.t1;Parent=MS.gene056356.t1 |
| chr4.1 | exon | 34391657 | 34392118 | 34391657 | ID=MS.gene056356.t1.exon5;Parent=MS.gene056356.t1 |
| chr4.1 | CDS | 34391657 | 34392118 | 34391657 | ID=cds.MS.gene056356.t1;Parent=MS.gene056356.t1 |
| Gene Sequence |
| Protein sequence |
