AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40063

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40063.t1 MTR_5g005600 95.512 557 22 1 1 557 168 721 0.0 1073
MS.gene40063.t1 MTR_2g088470 57.724 492 195 5 63 552 252 732 0.0 562
MS.gene40063.t1 MTR_4g047800 56.914 499 195 6 63 552 242 729 0.0 542
MS.gene40063.t1 MTR_8g432540 46.600 500 250 7 63 552 314 806 3.99e-152 456
MS.gene40063.t1 MTR_7g076080 45.565 496 258 7 63 552 285 774 6.13e-149 447
MS.gene40063.t1 MTR_1g101280 40.196 510 284 8 53 552 252 750 3.55e-131 400
MS.gene40063.t1 MTR_2g101720 39.679 499 280 9 63 552 303 789 2.64e-122 379
MS.gene40063.t1 MTR_6g477820 38.086 512 284 10 63 552 223 723 2.42e-114 356
MS.gene40063.t1 MTR_0198s0030 38.583 508 280 9 63 552 258 751 3.42e-113 353
MS.gene40063.t1 MTR_5g029320 35.700 507 300 10 62 552 282 778 1.41e-102 327
MS.gene40063.t1 MTR_7g427710 36.822 535 277 16 46 552 137 638 3.93e-94 301
MS.gene40063.t1 MTR_2g083350 33.081 529 295 11 66 552 20 531 3.42e-83 270
MS.gene40063.t1 MTR_2g030570 34.638 511 295 13 63 553 205 696 4.11e-83 273
MS.gene40063.t1 MTR_2g083330 34.240 441 265 6 119 552 103 525 1.68e-79 260
MS.gene40063.t1 MTR_2g030600 34.200 500 307 12 63 553 203 689 1.35e-78 261
MS.gene40063.t1 MTR_7g427690 35.096 416 229 12 46 447 38 426 1.03e-73 242
MS.gene40063.t1 MTR_2g030660 33.605 491 302 11 70 553 175 648 4.81e-69 235
MS.gene40063.t1 MTR_0653s0020 36.548 197 101 5 248 440 1 177 8.47e-35 130
MS.gene40063.t1 MTR_2g030690 30.420 286 188 7 271 553 1 278 3.04e-27 111
MS.gene40063.t1 MTR_7g427700 39.130 161 74 5 406 552 281 431 2.51e-19 91.3
MS.gene40063.t1 MTR_7g427700 32.639 144 86 5 46 179 137 279 3.43e-11 65.9
MS.gene40063.t1 MTR_2g451350 35.385 130 83 1 75 203 1 130 1.62e-15 73.9
MS.gene40063.t1 MTR_0653s0010 41.803 122 49 4 445 552 1 114 3.20e-15 72.4
MS.gene40063.t1 MTR_7g027605 41.053 95 50 2 151 245 3 91 8.50e-15 70.5
MS.gene40063.t1 MTR_1g105420 73.171 41 10 1 180 219 171 211 3.19e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40063.t1 AT4G04890 57.856 541 205 7 23 552 207 735 0.0 606
MS.gene40063.t1 AT4G04890 57.856 541 205 7 23 552 207 735 0.0 606
MS.gene40063.t1 AT4G21750 56.306 563 204 9 23 556 212 761 0.0 605
MS.gene40063.t1 AT4G21750 56.306 563 204 9 23 556 212 761 0.0 605
MS.gene40063.t1 AT4G21750 56.306 563 204 9 23 556 212 761 0.0 605
MS.gene40063.t1 AT4G21750 56.306 563 204 9 23 556 212 761 0.0 605
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 202 6 63 552 245 716 0.0 537
MS.gene40063.t1 AT1G05230 54.786 491 200 7 63 552 245 714 0.0 531
MS.gene40063.t1 AT4G00730 42.937 538 279 10 28 552 276 798 8.41e-138 419
MS.gene40063.t1 AT3G61150 43.080 513 261 10 56 552 306 803 9.35e-138 419
MS.gene40063.t1 AT1G05230 53.743 374 156 5 63 435 245 602 3.16e-134 404
MS.gene40063.t1 AT2G32370 41.634 514 270 11 45 549 225 717 2.76e-120 371
MS.gene40063.t1 AT5G52170 37.643 526 276 9 34 552 198 678 4.30e-114 354
MS.gene40063.t1 AT5G52170 37.643 526 276 9 34 552 198 678 4.30e-114 354
MS.gene40063.t1 AT1G79840 37.925 530 303 11 34 553 172 685 5.41e-113 351
MS.gene40063.t1 AT1G79840 37.925 530 303 11 34 553 172 685 5.41e-113 351
MS.gene40063.t1 AT1G17920 40.121 496 268 8 63 552 209 681 8.31e-113 351
MS.gene40063.t1 AT1G17920 40.121 496 268 8 63 552 209 681 8.31e-113 351
MS.gene40063.t1 AT5G52170 37.381 527 281 9 34 552 198 683 1.23e-112 350
MS.gene40063.t1 AT1G79840 37.925 530 303 11 34 553 230 743 2.12e-112 352
MS.gene40063.t1 AT1G79840 37.996 529 302 11 34 552 259 771 3.45e-112 352
MS.gene40063.t1 AT1G73360 38.645 502 264 11 70 552 237 713 5.49e-107 337
MS.gene40063.t1 AT5G46880 35.657 502 299 12 63 552 317 806 1.02e-90 296
MS.gene40063.t1 AT5G46880 35.657 502 299 12 63 552 317 806 1.02e-90 296
MS.gene40063.t1 AT5G46880 35.657 502 299 12 63 552 317 806 1.02e-90 296
MS.gene40063.t1 AT1G79840 38.213 403 233 8 34 432 230 620 1.14e-87 283
MS.gene40063.t1 AT4G17710 35.657 502 283 14 63 553 232 704 1.00e-82 273
MS.gene40063.t1 AT4G25530 34.959 492 292 11 67 552 213 682 1.49e-81 269
MS.gene40063.t1 AT3G03260 32.721 544 313 16 31 549 176 691 4.02e-79 263
MS.gene40063.t1 AT5G17320 34.641 459 269 15 105 552 277 715 3.62e-65 226
MS.gene40063.t1 AT1G34650 32.803 503 307 15 63 552 221 705 4.37e-62 217
MS.gene40063.t1 AT4G00730 38.676 287 158 5 28 306 276 552 3.76e-57 201
MS.gene40063.t1 AT1G79840 39.711 277 154 6 34 307 230 496 1.57e-56 198
MS.gene40063.t1 AT3G03260 30.909 385 233 12 31 404 176 538 8.25e-47 172
MS.gene40063.t1 AT5G07260 27.570 428 269 17 73 493 98 491 7.17e-29 120
MS.gene40063.t1 AT5G07260 27.465 426 267 16 73 493 98 486 3.22e-28 119

Find 146 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCACGCTCTGCTGATTT+TGG 0.175951 5.2:-766282 MS.gene40063:CDS
GTTAATTCTGGACTTGCTTT+TGG 0.195569 5.2:-765091 MS.gene40063:CDS
AACTGCATCCAGATGGAATA+TGG 0.242195 5.2:-765432 MS.gene40063:CDS
ATTTCAAATGGTCGTGATTC+TGG 0.286392 5.2:-764477 MS.gene40063:CDS
TAGCTCCTCAGTACAGATTA+AGG 0.286789 5.2:-766199 MS.gene40063:CDS
TATAAACCTCTAGTTAATTC+TGG 0.304749 5.2:-765103 MS.gene40063:CDS
AACACCCTCCTTGGAGGAAC+TGG 0.338188 5.2:+764677 None:intergenic
GAGAATTGCACTGATGTAAC+TGG 0.338466 5.2:-763842 MS.gene40063:CDS
AAGACCTTAGTGAGACCATT+TGG 0.340133 5.2:+765295 None:intergenic
CGTCTTACTCTGCTTCCTTC+CGG 0.342730 5.2:-763749 MS.gene40063:CDS
ACAACCTCCGGTCCGTTTCC+AGG 0.348649 5.2:+764788 None:intergenic
GTTTACAGTATCTCACAAAA+TGG 0.349194 5.2:+765452 None:intergenic
CCAGATCCGACATTCATAAT+TGG 0.363963 5.2:+763686 None:intergenic
GAGAATCTCAGTGACATAAT+TGG 0.367087 5.2:+766077 None:intergenic
GACTTGAGTCGCCGCCATTC+AGG 0.368603 5.2:+763771 None:intergenic
ACTTACAGTGATACGAAATA+AGG 0.385266 5.2:+764443 None:intergenic
ACCAAACTGGCTAGGACATA+TGG 0.389902 5.2:-766120 MS.gene40063:CDS
ATTGTTGGATGATGTTATAT+TGG 0.393371 5.2:+766317 None:intergenic
ATTGTAGAGCTTGCTGTTGT+TGG 0.393723 5.2:-766156 MS.gene40063:CDS
TCCACATGCAAGGCTAGCTC+TGG 0.401494 5.2:-763618 MS.gene40063:CDS
CGGCGGTATAGTTCATGAAT+TGG 0.401952 5.2:-764505 MS.gene40063:CDS
AGCTTTAATCCCGATGTGTT+GGG 0.405398 5.2:+766012 None:intergenic
CCAATTATGAATGTCGGATC+TGG 0.406349 5.2:-763686 MS.gene40063:CDS
ACACTTGAAGTCCTTTCAAC+TGG 0.406882 5.2:-765662 MS.gene40063:CDS
AAGTATTTCCCAAGGGCTAA+TGG 0.411663 5.2:-766036 MS.gene40063:CDS
AGACCTTAGTGAGACCATTT+GGG 0.436761 5.2:+765296 None:intergenic
GCATTTGTTATACACCCATC+TGG 0.446371 5.2:+763713 None:intergenic
TCCATATGTCCTAGCCAGTT+TGG 0.452823 5.2:+766119 None:intergenic
TTCAGGATTTCATGCATTGT+AGG 0.456298 5.2:+763788 None:intergenic
GCCACTACCCATATTCCATC+TGG 0.457430 5.2:+765424 None:intergenic
AGAAAATCAAACACCCTCCT+TGG 0.457924 5.2:+764668 None:intergenic
TAATGAAATTAGATGCCATT+AGG 0.460205 5.2:+763530 None:intergenic
AAAACTGCAGTGATGCCTAA+TGG 0.465524 5.2:-763545 MS.gene40063:CDS
GCTAGCTTTAGTACAAGTAT+TGG 0.471031 5.2:-764842 MS.gene40063:CDS
TGTTGGGACCATTAGCCCTT+GGG 0.476328 5.2:+766028 None:intergenic
ATGAGGATATCTACAAGATC+AGG 0.482347 5.2:+765949 None:intergenic
GAATTGGCTCACATTTCAAA+TGG 0.482575 5.2:-764489 MS.gene40063:CDS
AGCTCCTCAGTACAGATTAA+GGG 0.487431 5.2:-766198 MS.gene40063:CDS
AGAGCTTGCTGTTGTTGGAA+TGG 0.487738 5.2:-766151 MS.gene40063:CDS
GTTCTTCTACAACACATGCT+TGG 0.487768 5.2:-764820 MS.gene40063:CDS
AAACGGCCACCAACGTTCCA+CGG 0.489293 5.2:-765015 MS.gene40063:CDS
GCTAATGGTCCCAACACATC+GGG 0.493856 5.2:-766021 MS.gene40063:CDS
AATGGCTGAACTGACCAAAC+TGG 0.494651 5.2:-766133 MS.gene40063:CDS
CGAGAGTCTGCAGGATCTGT+TGG 0.502957 5.2:+766342 None:intergenic
AAGCTTTAATCCCGATGTGT+TGG 0.503073 5.2:+766011 None:intergenic
TTTGGCTTCCAGTTCCTCCA+AGG 0.503857 5.2:-764685 MS.gene40063:CDS
CCACTGTTAACACTTTGATC+AGG 0.506278 5.2:-763586 MS.gene40063:CDS
GTCATGACCATTACAACCTC+CGG 0.508691 5.2:+764776 None:intergenic
AAATGTAGAAGTTGATGATC+AGG 0.509315 5.2:-765140 MS.gene40063:CDS
AATAACATGAGTGCTATTGT+TGG 0.512062 5.2:+766302 None:intergenic
GTAGGAGAGGCTTTCACTGT+TGG 0.513732 5.2:-766222 MS.gene40063:CDS
GCTTCCAGTTCCTCCAAGGA+GGG 0.515083 5.2:-764681 MS.gene40063:CDS
ACATCGGGATTAAAGCTTGA+GGG 0.520054 5.2:-766006 MS.gene40063:CDS
ACTGCATCCAGATGGAATAT+GGG 0.521116 5.2:-765431 MS.gene40063:CDS
GAAGTCCTTTCAACTGGAGT+GGG 0.523037 5.2:-765656 MS.gene40063:CDS
ATTGAATCTTGCGGAAAGGT+TGG 0.528383 5.2:-764867 MS.gene40063:CDS
AACGGCCACCAACGTTCCAC+GGG 0.530317 5.2:-765014 MS.gene40063:CDS
TATGTCACTGAGATTCTCAA+TGG 0.532052 5.2:-766072 MS.gene40063:CDS
TGGACAAAGGTACCTGGAAA+CGG 0.533786 5.2:-764800 MS.gene40063:CDS
AAATCAAACACCCTCCTTGG+AGG 0.534430 5.2:+764671 None:intergenic
TGCATTGTAGGTATTTGCAC+AGG 0.535629 5.2:+763800 None:intergenic
ATTAGTACTTACCACTTGCA+AGG 0.535950 5.2:+765616 None:intergenic
TTGATTGAGACACTCCCAAA+TGG 0.537043 5.2:-765310 MS.gene40063:CDS
CGAGTAGGAACATGTGGGGA+GGG 0.539762 5.2:+765481 None:intergenic
CATGCTTGGACAAAGGTACC+TGG 0.544698 5.2:-764806 MS.gene40063:CDS
GCACTTAGCACAACACTGAC+GGG 0.544921 5.2:+764719 None:intergenic
TGAAGTCCTTTCAACTGGAG+TGG 0.545864 5.2:-765657 MS.gene40063:CDS
AAACGGACCGGAGGTTGTAA+TGG 0.547300 5.2:-764783 MS.gene40063:CDS
GTGTTGGGACCATTAGCCCT+TGG 0.548264 5.2:+766027 None:intergenic
ATTATGAATGTCGGATCTGG+AGG 0.550174 5.2:-763683 MS.gene40063:CDS
GGCTTCCAGTTCCTCCAAGG+AGG 0.551888 5.2:-764682 MS.gene40063:CDS
TACCTCCCACTCCAGTTGAA+AGG 0.552733 5.2:+765651 None:intergenic
GATGGGTGTATAACAAATGC+AGG 0.554349 5.2:-763710 MS.gene40063:CDS
TACTGTAAACTGCATCCAGA+TGG 0.557363 5.2:-765439 MS.gene40063:CDS
TACAACACATGCTTGGACAA+AGG 0.558020 5.2:-764813 MS.gene40063:CDS
CAGTGGGATATTCTCTCCGC+CGG 0.564704 5.2:-764525 MS.gene40063:CDS
CTGAACTGACCAAACTGGCT+AGG 0.569467 5.2:-766128 MS.gene40063:CDS
GAAAAGTATATTGAATCTTG+CGG 0.569980 5.2:-764876 MS.gene40063:CDS
AATTGGTGGGAAGCCAAAGA+GGG 0.573774 5.2:+766094 None:intergenic
AGCACTTAGCACAACACTGA+CGG 0.577940 5.2:+764718 None:intergenic
AATCTCAGTGACATAATTGG+TGG 0.578666 5.2:+766080 None:intergenic
AGGGTCTTAATGAGAAGCAA+AGG 0.578872 5.2:-766179 MS.gene40063:CDS
GGAGTTGCTGGTGGTAACAA+TGG 0.581415 5.2:-766261 MS.gene40063:CDS
TGATCTTGTAGATATCCTCA+TGG 0.582197 5.2:-765947 MS.gene40063:CDS
GCAGGACCAATTATGAATGT+CGG 0.584913 5.2:-763692 MS.gene40063:CDS
ACAACCAGAGGGTCTTCTGT+TGG 0.585992 5.2:+765333 None:intergenic
ATGTTCCCGTGGAACGTTGG+TGG 0.586357 5.2:+765009 None:intergenic
AGAACCAACAGAAGACCCTC+TGG 0.588399 5.2:-765337 MS.gene40063:CDS
AACGTTCCACGGGAACATCA+TGG 0.588608 5.2:-765004 MS.gene40063:intron
GAGTAGGAACATGTGGGGAG+GGG 0.590439 5.2:+765482 None:intergenic
TTGATTCTATTCCACATGCA+AGG 0.590966 5.2:-763628 MS.gene40063:CDS
CACATCGGGATTAAAGCTTG+AGG 0.592677 5.2:-766007 MS.gene40063:CDS
GGCTAATGGTCCCAACACAT+CGG 0.594460 5.2:-766022 MS.gene40063:CDS
ATATTGGCACGAGAGTCTGC+AGG 0.595802 5.2:+766333 None:intergenic
GTATATTGAATCTTGCGGAA+AGG 0.597531 5.2:-764871 MS.gene40063:CDS
GTCCTTTCAACTGGAGTGGG+AGG 0.597763 5.2:-765653 MS.gene40063:CDS
CCACATGCAAGGCTAGCTCT+GGG 0.598313 5.2:-763617 MS.gene40063:CDS
AATACATGAAGTATTTCCCA+AGG 0.599100 5.2:-766044 MS.gene40063:CDS
ATCTCAGTGACATAATTGGT+GGG 0.600678 5.2:+766081 None:intergenic
TGATCAGGAACACTGTGGAA+AGG 0.601274 5.2:-763571 MS.gene40063:CDS
AAAGGTACCTGGAAACGGAC+CGG 0.603908 5.2:-764795 MS.gene40063:CDS
CACTGAGATTCTCAATGGAG+AGG 0.605470 5.2:-766067 MS.gene40063:CDS
TGTTGCATTTAACAGATGCA+AGG 0.605749 5.2:+765393 None:intergenic
ACAATGCATGAAATCCTGAA+TGG 0.606726 5.2:-763785 MS.gene40063:CDS
CAATTCATGAACTATACCGC+CGG 0.609707 5.2:+764506 None:intergenic
ACTCCCAAATGGTCTCACTA+AGG 0.610306 5.2:-765299 MS.gene40063:intron
TAATTGGTGGGAAGCCAAAG+AGG 0.613117 5.2:+766093 None:intergenic
GGAGCACACCACCGCATGGT+AGG 0.614498 5.2:-766240 MS.gene40063:CDS
ACGAGTAGGAACATGTGGGG+AGG 0.617756 5.2:+765480 None:intergenic
ACAGTGAGATTGACTCCGGA+GGG 0.618021 5.2:-764902 MS.gene40063:intron
TGTAGATATCCTCATGGATG+TGG 0.622507 5.2:-765941 MS.gene40063:intron
ATGTACAGTGAGATTGACTC+CGG 0.623201 5.2:-764906 MS.gene40063:intron
GCAAGTCCAGAATTAACTAG+AGG 0.625489 5.2:+765097 None:intergenic
TCCAGATGGAATATGGGTAG+TGG 0.628113 5.2:-765425 MS.gene40063:CDS
ACACCACCGCATGGTAGGAG+AGG 0.632377 5.2:-766235 MS.gene40063:CDS
CCCAGAGCTAGCCTTGCATG+TGG 0.637254 5.2:+763617 None:intergenic
TGGGATATTCTCTCCGCCGG+CGG 0.644828 5.2:-764522 MS.gene40063:CDS
ATTGGTGGGAAGCCAAAGAG+GGG 0.648389 5.2:+766095 None:intergenic
TTATGAATGTCGGATCTGGA+GGG 0.649910 5.2:-763682 MS.gene40063:CDS
AAGCCTCTCCTACCATGCGG+TGG 0.649944 5.2:+766232 None:intergenic
CAATGGAGCACACCACCGCA+TGG 0.649965 5.2:-766244 MS.gene40063:CDS
AGAATTGCACTGATGTAACT+GGG 0.652163 5.2:-763841 MS.gene40063:CDS
ATGATGTTCCCGTGGAACGT+TGG 0.653734 5.2:+765006 None:intergenic
TACAGTGAGATTGACTCCGG+AGG 0.655167 5.2:-764903 MS.gene40063:intron
TATATACCATGATGTTCCCG+TGG 0.660275 5.2:+764998 None:intergenic
CTACGATGGAGCCTTGCAAG+TGG 0.661414 5.2:-765627 MS.gene40063:intron
TGTCTCAATCAAACAACCAG+AGG 0.663405 5.2:+765321 None:intergenic
TTTGACGAGTAGGAACATGT+GGG 0.667790 5.2:+765476 None:intergenic
GTCTCAATCAAACAACCAGA+GGG 0.671321 5.2:+765322 None:intergenic
AAATTCAGAGCAGAGTGATG+TGG 0.672413 5.2:-763876 MS.gene40063:CDS
GGAGTGGGAGGTAACTACGA+TGG 0.675779 5.2:-765641 MS.gene40063:CDS
TGAGGGTTCGAAAGAATCCG+TGG 0.680929 5.2:-765989 MS.gene40063:CDS
AAGACCCTTAATCTGTACTG+AGG 0.682265 5.2:+766194 None:intergenic
ATGCATGAAATCCTGAATGG+CGG 0.684425 5.2:-763782 MS.gene40063:CDS
TGTAGAAGTTGATGATCAGG+TGG 0.686691 5.2:-765137 MS.gene40063:CDS
TTGACGAGTAGGAACATGTG+GGG 0.689635 5.2:+765477 None:intergenic
TTGGTGGGAAGCCAAAGAGG+GGG 0.695051 5.2:+766096 None:intergenic
ATACATGAAGTATTTCCCAA+GGG 0.695847 5.2:-766043 MS.gene40063:CDS
AGCATTAATCATGACCACCA+CGG 0.701180 5.2:+765972 None:intergenic
GGTACCTGGAAACGGACCGG+AGG 0.704720 5.2:-764792 MS.gene40063:CDS
CACTTTGATCAGGAACACTG+TGG 0.708628 5.2:-763576 MS.gene40063:CDS
TTCATGAACTATACCGCCGG+CGG 0.721861 5.2:+764509 None:intergenic
AATGACTCACCACATCCATG+AGG 0.740230 5.2:+765932 None:intergenic
GGGTTCGAAAGAATCCGTGG+TGG 0.741743 5.2:-765986 MS.gene40063:CDS
TGAAAGCCTCTCCTACCATG+CGG 0.748941 5.2:+766229 None:intergenic
CCTGATCAAAGTGTTAACAG+TGG 0.772385 5.2:+763586 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAAAAAAAAAA+AGG + chr5.2:764921-764940 None:intergenic 0.0%
!! AAATTTAATAATATAAATGG+AGG + chr5.2:764157-764176 None:intergenic 10.0%
!! AAGTTATGTAAAATTAAAAT+TGG - chr5.2:765468-765487 MS.gene40063:CDS 10.0%
!! AATTTAATAATATAAATGGA+GGG + chr5.2:764156-764175 None:intergenic 10.0%
!! TTAATAATAGTTTATTATGT+TGG - chr5.2:764649-764668 MS.gene40063:CDS 10.0%
!!! AATAATATTCTAAAAATACT+TGG + chr5.2:764077-764096 None:intergenic 10.0%
!!! TTTATTTTAAAAAAGAACAT+TGG - chr5.2:764099-764118 MS.gene40063:intron 10.0%
!!! TTTTTATATATGTGTATATA+TGG + chr5.2:765844-765863 None:intergenic 10.0%
!! AAACATTAATGCAAATAATA+AGG + chr5.2:764014-764033 None:intergenic 15.0%
!! ATATTTAATTGAATTTACAG+TGG - chr5.2:765350-765369 MS.gene40063:CDS 15.0%
!! TATTTAATTGAATTTACAGT+GGG - chr5.2:765351-765370 MS.gene40063:CDS 15.0%
!!! AACATTAAAAGTCATTTTTA+TGG + chr5.2:765721-765740 None:intergenic 15.0%
!!! AATTTTCCATAAATGTATTA+AGG - chr5.2:765765-765784 MS.gene40063:intron 15.0%
!!! ACATTAAAAGTCATTTTTAT+GGG + chr5.2:765720-765739 None:intergenic 15.0%
!!! ATTAATATTATTTTAGGTGA+AGG + chr5.2:764634-764653 None:intergenic 15.0%
!!! TTAATGTTATTTACAGTAAT+TGG - chr5.2:765733-765752 MS.gene40063:intron 15.0%
!! ATTAAAATTGGTATAGTATC+AGG - chr5.2:765480-765499 MS.gene40063:CDS 20.0%
!! TATGAACCTTAATACATTTA+TGG + chr5.2:765774-765793 None:intergenic 20.0%
!! TTAAAATTGGTATAGTATCA+GGG - chr5.2:765481-765500 MS.gene40063:CDS 20.0%
!!! AAATTTGTTTTCAGAATCAA+TGG - chr5.2:764171-764190 MS.gene40063:intron 20.0%
!!! AATATGACTAGATCAAATTT+TGG - chr5.2:765815-765834 MS.gene40063:intron 20.0%
!!! CATTTTTATGGGAAAATTAA+CGG + chr5.2:765709-765728 None:intergenic 20.0%
!!! TATGTTGGATTATTTTAATG+TGG - chr5.2:764664-764683 MS.gene40063:CDS 20.0%
! ATCACTAATATACTATACAG+TGG + chr5.2:765941-765960 None:intergenic 25.0%
! ATTGTTGGATGATGTTATAT+TGG + chr5.2:763578-763597 None:intergenic 25.0%
! GCATTAATGTTTCAAAAACT+TGG - chr5.2:764022-764041 MS.gene40063:intron 25.0%
! TAAAATTGGTATAGTATCAG+GGG - chr5.2:765482-765501 MS.gene40063:CDS 25.0%
! TATAAACCTCTAGTTAATTC+TGG - chr5.2:764789-764808 MS.gene40063:CDS 25.0%
!! GAAAAGTATATTGAATCTTG+CGG - chr5.2:765016-765035 MS.gene40063:CDS 25.0%
!!! GTTGTCTTGTTTTTTTAAAC+AGG - chr5.2:764716-764735 MS.gene40063:CDS 25.0%
!!! GTTTTTTTAAACAGGTTACA+TGG - chr5.2:764724-764743 MS.gene40063:CDS 25.0%
!!! TGATCGTCTTGTTTTTAAAA+CGG - chr5.2:764860-764879 MS.gene40063:CDS 25.0%
ACTTACAGTGATACGAAATA+AGG + chr5.2:765452-765471 None:intergenic 30.0%
GTTTACAGTATCTCACAAAA+TGG + chr5.2:764443-764462 None:intergenic 30.0%
! AATAACATGAGTGCTATTGT+TGG + chr5.2:763593-763612 None:intergenic 30.0%
! AATACATGAAGTATTTCCCA+AGG - chr5.2:763848-763867 MS.gene40063:CDS 30.0%
! AATATACTTTTCTTTCCCTC+CGG + chr5.2:765008-765027 None:intergenic 30.0%
! AGCAATAAAACTAAGAGTAC+TGG + chr5.2:765566-765585 None:intergenic 30.0%
! ATACATGAAGTATTTCCCAA+GGG - chr5.2:763849-763868 MS.gene40063:CDS 30.0%
! CAATGGTCAAATATGTTTTG+CGG - chr5.2:764188-764207 MS.gene40063:intron 30.0%
! TAATAAGGCTTAGAAAGTGT+TGG + chr5.2:763999-764018 None:intergenic 30.0%
!! AAATGTAGAAGTTGATGATC+AGG - chr5.2:764752-764771 MS.gene40063:CDS 30.0%
AATCTCAGTGACATAATTGG+TGG + chr5.2:763815-763834 None:intergenic 35.0%
ACAATGCATGAAATCCTGAA+TGG - chr5.2:766107-766126 MS.gene40063:CDS 35.0%
AGGTGCAAAACTAAAATCTC+AGG + chr5.2:765599-765618 None:intergenic 35.0%
ATCTCAGTGACATAATTGGT+GGG + chr5.2:763814-763833 None:intergenic 35.0%
ATCTGGAAAAATAGCGAATC+CGG + chr5.2:766165-766184 None:intergenic 35.0%
ATGAGGATATCTACAAGATC+AGG + chr5.2:763946-763965 None:intergenic 35.0%
ATTAGTACTTACCACTTGCA+AGG + chr5.2:764279-764298 None:intergenic 35.0%
ATTTCAAATGGTCGTGATTC+TGG - chr5.2:765415-765434 MS.gene40063:CDS 35.0%
GAGAATCTCAGTGACATAAT+TGG + chr5.2:763818-763837 None:intergenic 35.0%
GCATTAAACACGTCATTCAT+GGG + chr5.2:765687-765706 None:intergenic 35.0%
GGTGCAAAACTAAAATCTCA+GGG + chr5.2:765598-765617 None:intergenic 35.0%
GTATATTGAATCTTGCGGAA+AGG - chr5.2:765021-765040 MS.gene40063:CDS 35.0%
GTGCAAATAACAATGATCCA+GGG + chr5.2:765544-765563 None:intergenic 35.0%
TATGTCACTGAGATTCTCAA+TGG - chr5.2:763820-763839 MS.gene40063:CDS 35.0%
TGATCTTGTAGATATCCTCA+TGG - chr5.2:763945-763964 MS.gene40063:intron 35.0%
TGTTGCATTTAACAGATGCA+AGG + chr5.2:764502-764521 None:intergenic 35.0%
TTAGCGTGACTGATATTAAC+TGG - chr5.2:765639-765658 MS.gene40063:CDS 35.0%
TTCAGGATTTCATGCATTGT+AGG + chr5.2:766107-766126 None:intergenic 35.0%
TTGATTCTATTCCACATGCA+AGG - chr5.2:766264-766283 MS.gene40063:CDS 35.0%
! AGAATTGCACTGATGTAACT+GGG - chr5.2:766051-766070 MS.gene40063:CDS 35.0%
! GAATTGGCTCACATTTCAAA+TGG - chr5.2:765403-765422 MS.gene40063:CDS 35.0%
!! GCTAGCTTTAGTACAAGTAT+TGG - chr5.2:765050-765069 MS.gene40063:CDS 35.0%
!! GTTAATTCTGGACTTGCTTT+TGG - chr5.2:764801-764820 MS.gene40063:CDS 35.0%
!! TAAACTGACATAGTCTTGTG+AGG + chr5.2:765622-765641 None:intergenic 35.0%
!! TAAGTGCTGCTACTTCTTTT+TGG - chr5.2:765189-765208 MS.gene40063:intron 35.0%
!! TTTTAGGTGAAGGTGAAATG+TGG + chr5.2:764624-764643 None:intergenic 35.0%
!!! ACAAAATGGTTTTGACGAGT+AGG + chr5.2:764429-764448 None:intergenic 35.0%
!!! GATTCGCTATTTTTCCAGAT+GGG - chr5.2:766165-766184 MS.gene40063:CDS 35.0%
AAAACTGCAGTGATGCCTAA+TGG - chr5.2:766347-766366 MS.gene40063:CDS 40.0%
AAAACTTGGACCAAACCATC+CGG - chr5.2:764036-764055 MS.gene40063:intron 40.0%
AAATTCAGAGCAGAGTGATG+TGG - chr5.2:766016-766035 MS.gene40063:CDS 40.0%
AACTGCATCCAGATGGAATA+TGG - chr5.2:764460-764479 MS.gene40063:CDS 40.0%
AAGACCCTTAATCTGTACTG+AGG + chr5.2:763701-763720 None:intergenic 40.0%
AAGACCTTAGTGAGACCATT+TGG + chr5.2:764600-764619 None:intergenic 40.0%
AAGTATTTCCCAAGGGCTAA+TGG - chr5.2:763856-763875 MS.gene40063:CDS 40.0%
AATTGGTATAGTATCAGGGG+CGG - chr5.2:765485-765504 MS.gene40063:CDS 40.0%
ACACTTGAAGTCCTTTCAAC+TGG - chr5.2:764230-764249 MS.gene40063:intron 40.0%
ACATCGGGATTAAAGCTTGA+GGG - chr5.2:763886-763905 MS.gene40063:intron 40.0%
ACTGCATCCAGATGGAATAT+GGG - chr5.2:764461-764480 MS.gene40063:CDS 40.0%
AGAAAATCAAACACCCTCCT+TGG + chr5.2:765227-765246 None:intergenic 40.0%
AGACCTTAGTGAGACCATTT+GGG + chr5.2:764599-764618 None:intergenic 40.0%
AGCATTAATCATGACCACCA+CGG + chr5.2:763923-763942 None:intergenic 40.0%
AGCTCCTCAGTACAGATTAA+GGG - chr5.2:763694-763713 MS.gene40063:CDS 40.0%
AGGGTCTTAATGAGAAGCAA+AGG - chr5.2:763713-763732 MS.gene40063:CDS 40.0%
ATGCATGAAATCCTGAATGG+CGG - chr5.2:766110-766129 MS.gene40063:CDS 40.0%
ATTATGAATGTCGGATCTGG+AGG - chr5.2:766209-766228 MS.gene40063:CDS 40.0%
ATTGAATCTTGCGGAAAGGT+TGG - chr5.2:765025-765044 MS.gene40063:CDS 40.0%
CAATTCATGAACTATACCGC+CGG + chr5.2:765389-765408 None:intergenic 40.0%
CCAATTATGAATGTCGGATC+TGG - chr5.2:766206-766225 MS.gene40063:CDS 40.0%
CCACTGTTAACACTTTGATC+AGG - chr5.2:766306-766325 MS.gene40063:CDS 40.0%
CCAGATCCGACATTCATAAT+TGG + chr5.2:766209-766228 None:intergenic 40.0%
GATGGGTGTATAACAAATGC+AGG - chr5.2:766182-766201 MS.gene40063:CDS 40.0%
GCAAGTCCAGAATTAACTAG+AGG + chr5.2:764798-764817 None:intergenic 40.0%
GCAGGACCAATTATGAATGT+CGG - chr5.2:766200-766219 MS.gene40063:CDS 40.0%
GGCATTAAACACGTCATTCA+TGG + chr5.2:765688-765707 None:intergenic 40.0%
GGTGCAAATAACAATGATCC+AGG + chr5.2:765545-765564 None:intergenic 40.0%
GTCTCAATCAAACAACCAGA+GGG + chr5.2:764573-764592 None:intergenic 40.0%
GTTCTTCTACAACACATGCT+TGG - chr5.2:765072-765091 MS.gene40063:CDS 40.0%
TACAACACATGCTTGGACAA+AGG - chr5.2:765079-765098 MS.gene40063:CDS 40.0%
TACTGTAAACTGCATCCAGA+TGG - chr5.2:764453-764472 MS.gene40063:CDS 40.0%
TAGCTCCTCAGTACAGATTA+AGG - chr5.2:763693-763712 MS.gene40063:CDS 40.0%
TATATACCATGATGTTCCCG+TGG + chr5.2:764897-764916 None:intergenic 40.0%
TGCATTGTAGGTATTTGCAC+AGG + chr5.2:766095-766114 None:intergenic 40.0%
TGTAGATATCCTCATGGATG+TGG - chr5.2:763951-763970 MS.gene40063:intron 40.0%
TGTCTCAATCAAACAACCAG+AGG + chr5.2:764574-764593 None:intergenic 40.0%
TTATGAATGTCGGATCTGGA+GGG - chr5.2:766210-766229 MS.gene40063:CDS 40.0%
TTGATTGAGACACTCCCAAA+TGG - chr5.2:764582-764601 MS.gene40063:intron 40.0%
TTGGTTCAACCTGATTGAAC+CGG + chr5.2:764058-764077 None:intergenic 40.0%
TTTGACGAGTAGGAACATGT+GGG + chr5.2:764419-764438 None:intergenic 40.0%
! AAGCTTTAATCCCGATGTGT+TGG + chr5.2:763884-763903 None:intergenic 40.0%
! AGCTTTAATCCCGATGTGTT+GGG + chr5.2:763883-763902 None:intergenic 40.0%
! ATGTACAGTGAGATTGACTC+CGG - chr5.2:764986-765005 MS.gene40063:intron 40.0%
! CCTGATCAAAGTGTTAACAG+TGG + chr5.2:766309-766328 None:intergenic 40.0%
! GAGAATTGCACTGATGTAAC+TGG - chr5.2:766050-766069 MS.gene40063:CDS 40.0%
! TTTTGACGAGTAGGAACATG+TGG + chr5.2:764420-764439 None:intergenic 40.0%
!! ATTGTAGAGCTTGCTGTTGT+TGG - chr5.2:763736-763755 MS.gene40063:CDS 40.0%
!! GCATTTGTTATACACCCATC+TGG + chr5.2:766182-766201 None:intergenic 40.0%
!! GCTCTGAATTTTCACTCTAC+AGG + chr5.2:766007-766026 None:intergenic 40.0%
!! TGTAGAAGTTGATGATCAGG+TGG - chr5.2:764755-764774 MS.gene40063:CDS 40.0%
!!! ATTTCACGCTCTGCTGATTT+TGG - chr5.2:763610-763629 MS.gene40063:CDS 40.0%
!!! GGATTCGCTATTTTTCCAGA+TGG - chr5.2:766164-766183 MS.gene40063:CDS 40.0%
AAATCAAACACCCTCCTTGG+AGG + chr5.2:765224-765243 None:intergenic 45.0%
AATGACTCACCACATCCATG+AGG + chr5.2:763963-763982 None:intergenic 45.0%
AATGGCTGAACTGACCAAAC+TGG - chr5.2:763759-763778 MS.gene40063:CDS 45.0%
AATTGGTGGGAAGCCAAAGA+GGG + chr5.2:763801-763820 None:intergenic 45.0%
ACCAAACTGGCTAGGACATA+TGG - chr5.2:763772-763791 MS.gene40063:CDS 45.0%
ACTCCCAAATGGTCTCACTA+AGG - chr5.2:764593-764612 MS.gene40063:intron 45.0%
AGCACTTAGCACAACACTGA+CGG + chr5.2:765177-765196 None:intergenic 45.0%
CACATCGGGATTAAAGCTTG+AGG - chr5.2:763885-763904 MS.gene40063:intron 45.0%
CACTGAGATTCTCAATGGAG+AGG - chr5.2:763825-763844 MS.gene40063:CDS 45.0%
CACTTTGATCAGGAACACTG+TGG - chr5.2:766316-766335 MS.gene40063:CDS 45.0%
CGGCGGTATAGTTCATGAAT+TGG - chr5.2:765387-765406 MS.gene40063:CDS 45.0%
GAAGTCCTTTCAACTGGAGT+GGG - chr5.2:764236-764255 MS.gene40063:intron 45.0%
GGAAAAATAGCGAATCCGGA+AGG + chr5.2:766161-766180 None:intergenic 45.0%
GTCATGACCATTACAACCTC+CGG + chr5.2:765119-765138 None:intergenic 45.0%
TAATTGGTGGGAAGCCAAAG+AGG + chr5.2:763802-763821 None:intergenic 45.0%
TACTATACAGTGGCGTATCC+AGG + chr5.2:765931-765950 None:intergenic 45.0%
TCCAGATGGAATATGGGTAG+TGG - chr5.2:764467-764486 MS.gene40063:CDS 45.0%
TCCATATGTCCTAGCCAGTT+TGG + chr5.2:763776-763795 None:intergenic 45.0%
TGAAGTCCTTTCAACTGGAG+TGG - chr5.2:764235-764254 MS.gene40063:intron 45.0%
TGATCAGGAACACTGTGGAA+AGG - chr5.2:766321-766340 MS.gene40063:CDS 45.0%
TTCAACCTGATTGAACCGGA+TGG + chr5.2:764054-764073 None:intergenic 45.0%
TTGACGAGTAGGAACATGTG+GGG + chr5.2:764418-764437 None:intergenic 45.0%
!! ACTGACATAGTCTTGTGAGG+AGG + chr5.2:765619-765638 None:intergenic 45.0%
!! AGAGCTTGCTGTTGTTGGAA+TGG - chr5.2:763741-763760 MS.gene40063:CDS 45.0%
!! TGGACAAAGGTACCTGGAAA+CGG - chr5.2:765092-765111 MS.gene40063:CDS 45.0%
!!! TCTGCTGATTTTGGAGTTGC+TGG - chr5.2:763619-763638 MS.gene40063:CDS 45.0%
!!! TGCTTTTGGAGCTAAACGCT+GGG - chr5.2:764815-764834 MS.gene40063:CDS 45.0%
!!! TTGCTTTTGGAGCTAAACGC+TGG - chr5.2:764814-764833 MS.gene40063:CDS 45.0%
!! AACAAATTTAATAATATAAA+TGG + chr5.2:764160-764179 None:intergenic 5.0%
!!! ACTATTATTAATATTATTTT+AGG + chr5.2:764640-764659 None:intergenic 5.0%
AAACGGACCGGAGGTTGTAA+TGG - chr5.2:765109-765128 MS.gene40063:CDS 50.0%
AACAATGATCCAGGGTGTGC+AGG + chr5.2:765536-765555 None:intergenic 50.0%
AACGTTCCACGGGAACATCA+TGG - chr5.2:764888-764907 MS.gene40063:CDS 50.0%
ACAACCAGAGGGTCTTCTGT+TGG + chr5.2:764562-764581 None:intergenic 50.0%
AGAACCAACAGAAGACCCTC+TGG - chr5.2:764555-764574 MS.gene40063:intron 50.0%
ATATTGGCACGAGAGTCTGC+AGG + chr5.2:763562-763581 None:intergenic 50.0%
ATGATGTTCCCGTGGAACGT+TGG + chr5.2:764889-764908 None:intergenic 50.0%
ATTGGTGGGAAGCCAAAGAG+GGG + chr5.2:763800-763819 None:intergenic 50.0%
CCAAACCATCCGGTTCAATC+AGG - chr5.2:764046-764065 MS.gene40063:intron 50.0%
CCTGATTGAACCGGATGGTT+TGG + chr5.2:764049-764068 None:intergenic 50.0%
CGTCTTACTCTGCTTCCTTC+CGG - chr5.2:766143-766162 MS.gene40063:CDS 50.0%
CTGAACTGACCAAACTGGCT+AGG - chr5.2:763764-763783 MS.gene40063:CDS 50.0%
GCACTTAGCACAACACTGAC+GGG + chr5.2:765176-765195 None:intergenic 50.0%
GCCACTACCCATATTCCATC+TGG + chr5.2:764471-764490 None:intergenic 50.0%
GCTAATGGTCCCAACACATC+GGG - chr5.2:763871-763890 MS.gene40063:CDS 50.0%
GGAGTTGCTGGTGGTAACAA+TGG - chr5.2:763631-763650 MS.gene40063:CDS 50.0%
GGCTAATGGTCCCAACACAT+CGG - chr5.2:763870-763889 MS.gene40063:CDS 50.0%
GTAGGAGAGGCTTTCACTGT+TGG - chr5.2:763670-763689 MS.gene40063:CDS 50.0%
TACCTCCCACTCCAGTTGAA+AGG + chr5.2:764244-764263 None:intergenic 50.0%
TGAAAGCCTCTCCTACCATG+CGG + chr5.2:763666-763685 None:intergenic 50.0%
TGAGGGTTCGAAAGAATCCG+TGG - chr5.2:763903-763922 MS.gene40063:intron 50.0%
TGTTGGGACCATTAGCCCTT+GGG + chr5.2:763867-763886 None:intergenic 50.0%
TTCATGAACTATACCGCCGG+CGG + chr5.2:765386-765405 None:intergenic 50.0%
! AATTTTGCACCCCCTGACTC+AGG - chr5.2:765903-765922 MS.gene40063:intron 50.0%
! ACAGTGAGATTGACTCCGGA+GGG - chr5.2:764990-765009 MS.gene40063:intron 50.0%
! ATTTTGCACCCCCTGACTCA+GGG - chr5.2:765904-765923 MS.gene40063:intron 50.0%
! TACAGTGAGATTGACTCCGG+AGG - chr5.2:764989-765008 MS.gene40063:intron 50.0%
! TTTGGCTTCCAGTTCCTCCA+AGG - chr5.2:765207-765226 MS.gene40063:intron 50.0%
!! AAAGGTACCTGGAAACGGAC+CGG - chr5.2:765097-765116 MS.gene40063:CDS 50.0%
!! CATGCTTGGACAAAGGTACC+TGG - chr5.2:765086-765105 MS.gene40063:CDS 50.0%
!!! GCTGATTTTGGAGTTGCTGG+TGG - chr5.2:763622-763641 MS.gene40063:CDS 50.0%
AAACGGCCACCAACGTTCCA+CGG - chr5.2:764877-764896 MS.gene40063:CDS 55.0%
AACACCCTCCTTGGAGGAAC+TGG + chr5.2:765218-765237 None:intergenic 55.0%
ACGAGTAGGAACATGTGGGG+AGG + chr5.2:764415-764434 None:intergenic 55.0%
ATGTTCCCGTGGAACGTTGG+TGG + chr5.2:764886-764905 None:intergenic 55.0%
CAGTGGGATATTCTCTCCGC+CGG - chr5.2:765367-765386 MS.gene40063:CDS 55.0%
CGAGAGTCTGCAGGATCTGT+TGG + chr5.2:763553-763572 None:intergenic 55.0%
CGAGTAGGAACATGTGGGGA+GGG + chr5.2:764414-764433 None:intergenic 55.0%
CTACGATGGAGCCTTGCAAG+TGG - chr5.2:764265-764284 MS.gene40063:intron 55.0%
GAGTAGGAACATGTGGGGAG+GGG + chr5.2:764413-764432 None:intergenic 55.0%
GCGGATCCAGCTATGCTTGA+GGG - chr5.2:765504-765523 MS.gene40063:CDS 55.0%
GCTTCCAGTTCCTCCAAGGA+GGG - chr5.2:765211-765230 MS.gene40063:intron 55.0%
GGACATATGGACCCCCTCTT+TGG - chr5.2:763785-763804 MS.gene40063:CDS 55.0%
GGAGTGGGAGGTAACTACGA+TGG - chr5.2:764251-764270 MS.gene40063:intron 55.0%
GGGTTCGAAAGAATCCGTGG+TGG - chr5.2:763906-763925 MS.gene40063:intron 55.0%
GTATCCAGGACCCTGAGTCA+GGG + chr5.2:765917-765936 None:intergenic 55.0%
GTCCTTTCAACTGGAGTGGG+AGG - chr5.2:764239-764258 MS.gene40063:intron 55.0%
GTGTTGGGACCATTAGCCCT+TGG + chr5.2:763868-763887 None:intergenic 55.0%
TATCCAGGACCCTGAGTCAG+GGG + chr5.2:765916-765935 None:intergenic 55.0%
TGCACACCCTCAAGCATAGC+TGG + chr5.2:765513-765532 None:intergenic 55.0%
TTGGTGGGAAGCCAAAGAGG+GGG + chr5.2:763799-763818 None:intergenic 55.0%
! CCACATGCAAGGCTAGCTCT+GGG - chr5.2:766275-766294 MS.gene40063:CDS 55.0%
! TCCACATGCAAGGCTAGCTC+TGG - chr5.2:766274-766293 MS.gene40063:CDS 55.0%
AACGGCCACCAACGTTCCAC+GGG - chr5.2:764878-764897 MS.gene40063:CDS 60.0%
AAGCCTCTCCTACCATGCGG+TGG + chr5.2:763663-763682 None:intergenic 60.0%
ACAACCTCCGGTCCGTTTCC+AGG + chr5.2:765107-765126 None:intergenic 60.0%
ACACCACCGCATGGTAGGAG+AGG - chr5.2:763657-763676 MS.gene40063:CDS 60.0%
ATCCAGGACCCTGAGTCAGG+GGG + chr5.2:765915-765934 None:intergenic 60.0%
CAATGGAGCACACCACCGCA+TGG - chr5.2:763648-763667 MS.gene40063:CDS 60.0%
CGTATCCAGGACCCTGAGTC+AGG + chr5.2:765918-765937 None:intergenic 60.0%
GACTTGAGTCGCCGCCATTC+AGG + chr5.2:766124-766143 None:intergenic 60.0%
GGCGGATCCAGCTATGCTTG+AGG - chr5.2:765503-765522 MS.gene40063:CDS 60.0%
GGCTTCCAGTTCCTCCAAGG+AGG - chr5.2:765210-765229 MS.gene40063:intron 60.0%
TGGGATATTCTCTCCGCCGG+CGG - chr5.2:765370-765389 MS.gene40063:CDS 60.0%
!! CCCAGAGCTAGCCTTGCATG+TGG + chr5.2:766278-766297 None:intergenic 60.0%
GGAGCACACCACCGCATGGT+AGG - chr5.2:763652-763671 MS.gene40063:CDS 65.0%
GGTACCTGGAAACGGACCGG+AGG - chr5.2:765100-765119 MS.gene40063:CDS 65.0%
CACCCCCTGACTCAGGGTCC+TGG - chr5.2:765910-765929 MS.gene40063:intron 70.0%
GGGTGTGCACCTGCACACCC+TGG - chr5.2:765524-765543 MS.gene40063:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 763538 766376 763538 ID=MS.gene40063
chr5.2 mRNA 763538 766376 763538 ID=MS.gene40063.t1;Parent=MS.gene40063
chr5.2 exon 765942 766376 765942 ID=MS.gene40063.t1.exon1;Parent=MS.gene40063.t1
chr5.2 CDS 765942 766376 765942 ID=cds.MS.gene40063.t1;Parent=MS.gene40063.t1
chr5.2 exon 765628 765729 765628 ID=MS.gene40063.t1.exon2;Parent=MS.gene40063.t1
chr5.2 CDS 765628 765729 765628 ID=cds.MS.gene40063.t1;Parent=MS.gene40063.t1
chr5.2 exon 765300 765524 765300 ID=MS.gene40063.t1.exon3;Parent=MS.gene40063.t1
chr5.2 CDS 765300 765524 765300 ID=cds.MS.gene40063.t1;Parent=MS.gene40063.t1
chr5.2 exon 765005 765176 765005 ID=MS.gene40063.t1.exon4;Parent=MS.gene40063.t1
chr5.2 CDS 765005 765176 765005 ID=cds.MS.gene40063.t1;Parent=MS.gene40063.t1
chr5.2 exon 764643 764920 764643 ID=MS.gene40063.t1.exon5;Parent=MS.gene40063.t1
chr5.2 CDS 764643 764920 764643 ID=cds.MS.gene40063.t1;Parent=MS.gene40063.t1
chr5.2 exon 764449 764544 764449 ID=MS.gene40063.t1.exon6;Parent=MS.gene40063.t1
chr5.2 CDS 764449 764544 764449 ID=cds.MS.gene40063.t1;Parent=MS.gene40063.t1
chr5.2 exon 763538 763903 763538 ID=MS.gene40063.t1.exon7;Parent=MS.gene40063.t1
chr5.2 CDS 763538 763903 763538 ID=cds.MS.gene40063.t1;Parent=MS.gene40063.t1
Gene Sequence

>MS.gene40063

ATGGGTGAGACGCCAACAGATCCTGCAGACTCTCGTGCCAATATAACATCATCCAACAATAGCACTCATGTTATTTCACGCTCTGCTGATTTTGGAGTTGCTGGTGGTAACAATGGAGCACACCACCGCATGGTAGGAGAGGCTTTCACTGTTGGTAGCTCCTCAGTACAGATTAAGGGTCTTAATGAGAAGCAAAGGATTGTAGAGCTTGCTGTTGTTGGAATGGCTGAACTGACCAAACTGGCTAGGACATATGGACCCCCTCTTTGGCTTCCCACCAATTATGTCACTGAGATTCTCAATGGAGAGGAATACATGAAGTATTTCCCAAGGGCTAATGGTCCCAACACATCGGGATTAAAGCTTGAGGGTTCGAAAGAATCCGTGGTGGTCATGATTAATGCTCCTGATCTTGTAGATATCCTCATGGATGTGGTGAGTCATTAATGTTCATGCTACCAACACTTTCTAAGCCTTATTATTTGCATTAATGTTTCAAAAACTTGGACCAAACCATCCGGTTCAATCAGGTTGAACCAAGTATTTTTAGAATATTATTCTTTTATTTTAAAAAAGAACATTGGTTTACATGCATACTAAAAATATATAAAATTTCCCTCCATTTATATTATTAAATTTGTTTTCAGAATCAATGGTCAAATATGTTTTGCGGCATTGTTTCTAAAGCAGCAACACTTGAAGTCCTTTCAACTGGAGTGGGAGGTAACTACGATGGAGCCTTGCAAGTGGTAAGTACTAATTTAATTTCTTATACTTAATTTTAAAGAATTAATTTTAATATGTATTTCATCTAATTAATCTTTTTTTTTTTTTTTAAATGTTATTTTTTAGATGACAGCTGAATTTCAAGTCCCCTCCCCACATGTTCCTACTCGTCAAAACCATTTTGTGAGATACTGTAAACTGCATCCAGATGGAATATGGGTAGTGGCTGATGTGTCCTTGCATCTGTTAAATGCAACATCTGCTAGTAGTAGTAGTAGTAGTACTGCTTCAAGAACCAACAGAAGACCCTCTGGTTGTTTGATTGAGACACTCCCAAATGGTCTCACTAAGGTCTTACCACATTTCACCTTCACCTAAAATAATATTAATAATAGTTTATTATGTTGGATTATTTTAATGTGGATTAGTATAGTTAATTTTATCAATTATTTGTTGTCTTGTTTTTTTAAACAGGTTACATGGATTGAAAATGTAGAAGTTGATGATCAGGTGGTGCAAAATATATATAAACCTCTAGTTAATTCTGGACTTGCTTTTGGAGCTAAACGCTGGGTAGCTACATTACATCGACAATCTGATCGTCTTGTTTTTAAAACGGCCACCAACGTTCCACGGGAACATCATGGTATATAACCTTTTTTTTTTTTAAAAAAAAAATATATATATAAATGACAGTTATATATTTATGTATAACATTATATATGTACAGTGAGATTGACTCCGGAGGGAAAGAAAAGTATATTGAATCTTGCGGAAAGGTTGGTAGCTAGCTTTAGTACAAGTATTGGTTCTTCTACAACACATGCTTGGACAAAGGTACCTGGAAACGGACCGGAGGTTGTAATGGTCATGACGAAAAGATATATCGATGAATCGAGCATTGACAAACCCGTCAGTGTTGTGCTAAGTGCTGCTACTTCTTTTTGGCTTCCAGTTCCTCCAAGGAGGGTGTTTGATTTTCTTCGAGATCAAAACACAAGAAAACATGTATGTATCTACTAATATATGTCTAAAGTTCTGTAATGTGTTATTAGCACAATTAATTAATTAATTGTTGAAGCTTACATATTTAATTGAATTTACAGTGGGATATTCTCTCCGCCGGCGGTATAGTTCATGAATTGGCTCACATTTCAAATGGTCGTGATTCTGGCAACTATGTCTCCTTATTTCGTATCACTGTAAGTTATGTAAAATTAAAATTGGTATAGTATCAGGGGCGGATCCAGCTATGCTTGAGGGTGTGCACCTGCACACCCTGGATCATTGTTATTTGCACCAGTACTCTTAGTTTTATTGCTATATGCACACCCTGAGATTTTAGTTTTGCACCTCCTCACAAGACTATGTCAGTTTAGCGTGACTGATATTAACTGGTGTGTTTAGTGCTACTAATTTTCCCATGAATGACGTGTTTAATGCCGTTAATTTTCCCATAAAAATGACTTTTAATGTTATTTACAGTAATTGGTAGACTTTTAATTTTCCATAAATGTATTAAGGTTCATACATATTTATTAAATACTAAAAAATATGACTAGATCAAATTTTGGTAACCATATATACACATATATAAAAATTTATAATTTTAATATTAATATTAATTATTAAAATTAAAAATTTTGCACCCCCTGACTCAGGGTCCTGGATACGCCACTGTATAGTATATTAGTGATTAGAACACATATTCTAACGTTCTCTTTCGCTAAATATATTTTTCCTGTAGAGTGAAAATTCAGAGCAGAGTGATGTGGTAGTACTGCAAGAGAATTGCACTGATGTAACTGGGTCATATGTAGTATATGCGCCTGTGCAAATACCTACAATGCATGAAATCCTGAATGGCGGCGACTCAAGTCGTCTTACTCTGCTTCCTTCCGGATTCGCTATTTTTCCAGATGGGTGTATAACAAATGCAGGACCAATTATGAATGTCGGATCTGGAGGGTCTCTTGTCACAGTTGCATTTCAGATTATAGTTGATTCTATTCCACATGCAAGGCTAGCTCTGGGTTCAATCACCACTGTTAACACTTTGATCAGGAACACTGTGGAAAGGATTAAAACTGCAGTGATGCCTAATGGCATCTAA
Protein sequence

>MS.gene40063.t1

MGETPTDPADSRANITSSNNSTHVISRSADFGVAGGNNGAHHRMVGEAFTVGSSSVQIKGLNEKQRIVELAVVGMAELTKLARTYGPPLWLPTNYVTEILNGEEYMKYFPRANGPNTSGLKLEGSKESVVVMINAPDLVDILMDVNQWSNMFCGIVSKAATLEVLSTGVGGNYDGALQVMTAEFQVPSPHVPTRQNHFVRYCKLHPDGIWVVADVSLHLLNATSASSSSSSTASRTNRRPSGCLIETLPNGLTKVTWIENVEVDDQVVQNIYKPLVNSGLAFGAKRWVATLHRQSDRLVFKTATNVPREHHVRLTPEGKKSILNLAERLVASFSTSIGSSTTHAWTKVPGNGPEVVMVMTKRYIDESSIDKPVSVVLSAATSFWLPVPPRRVFDFLRDQNTRKHWDILSAGGIVHELAHISNGRDSGNYVSLFRITSENSEQSDVVVLQENCTDVTGSYVVYAPVQIPTMHEILNGGDSSRLTLLPSGFAIFPDGCITNAGPIMNVGSGGSLVTVAFQIIVDSIPHARLALGSITTVNTLIRNTVERIKTAVMPNGI