Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40400.t1 | XP_004493674.1 | 90.8 | 411 | 38 | 0 | 1 | 411 | 1 | 411 | 8.40E-167 | 596.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40400.t1 | Q99633 | 39.2 | 286 | 150 | 5 | 95 | 376 | 77 | 342 | 2.9e-43 | 177.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40400.t1 | A0A1S2XTC8 | 90.8 | 411 | 38 | 0 | 1 | 411 | 1 | 411 | 6.0e-167 | 596.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058783 | MS.gene40400 | 0.804367 | 2.23E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40400.t1 | MTR_7g095000 | 98.783 | 411 | 5 | 0 | 1 | 411 | 1 | 411 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40400.t1 | AT1G03140 | 70.755 | 424 | 107 | 3 | 1 | 411 | 1 | 420 | 0.0 | 564 |
| MS.gene40400.t1 | AT1G54590 | 65.411 | 292 | 76 | 7 | 122 | 407 | 85 | 357 | 6.02e-127 | 371 |
Find 109 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTATGAGGCGAGATTATC+TGG | 0.294838 | 7.2:-14654827 | MS.gene40400:CDS |
| TTTCTTGCCGCCGGTTTCTT+CGG | 0.312109 | 7.2:+14658476 | None:intergenic |
| GCATGTACTTCAGGTTCTTC+AGG | 0.319015 | 7.2:-14654887 | MS.gene40400:intron |
| AAACAACCGGTGACGCTATT+CGG | 0.329505 | 7.2:-14658195 | MS.gene40400:CDS |
| AGCAGTTGAGTTTAACAGTT+TGG | 0.335075 | 7.2:-14654590 | MS.gene40400:CDS |
| CTGCAATGGACCATTATATT+AGG | 0.339869 | 7.2:-14654804 | MS.gene40400:CDS |
| CGGCGGATGACTTCTTGTTT+AGG | 0.340183 | 7.2:+14658231 | None:intergenic |
| CTTAAATACGTTCTCAAAGC+TGG | 0.353113 | 7.2:-14658144 | MS.gene40400:CDS |
| CTGGCCTATCGGTGTTACTA+TGG | 0.360585 | 7.2:-14654761 | MS.gene40400:CDS |
| GTGTGATGAGGATAAGATTT+TGG | 0.371707 | 7.2:-14657875 | MS.gene40400:CDS |
| TTAAACTCAACTGCTTTAGA+TGG | 0.395372 | 7.2:+14654598 | None:intergenic |
| TTCGTCGGGGAGGGAAGCGC+TGG | 0.401745 | 7.2:+14658278 | None:intergenic |
| TCACCGGTTGTTTGAGAAAC+CGG | 0.412071 | 7.2:+14658205 | None:intergenic |
| CGGAGAAGCGGACGGCTAAA+GGG | 0.420729 | 7.2:-14657795 | MS.gene40400:CDS |
| AAAATAAATTAACTATCTCT+TGG | 0.424273 | 7.2:+14654475 | None:intergenic |
| CGGTTTCTTCGGCTAGGGAT+TGG | 0.425410 | 7.2:+14658487 | None:intergenic |
| AGTTTAACAGTTTGGCAAAT+GGG | 0.428747 | 7.2:-14654582 | MS.gene40400:CDS |
| TCGGCAGGCACTAATGTTGA+TGG | 0.435972 | 7.2:-14654857 | MS.gene40400:CDS |
| TGGCTATCGGGAATGCTCCC+TGG | 0.443575 | 7.2:-14654780 | MS.gene40400:CDS |
| ACGGAGAAGCGGACGGCTAA+AGG | 0.445518 | 7.2:-14657796 | MS.gene40400:CDS |
| GAGTTTAACAGTTTGGCAAA+TGG | 0.450367 | 7.2:-14654583 | MS.gene40400:CDS |
| AAGAAGTCATCCGCCGTCTC+CGG | 0.452806 | 7.2:-14658224 | MS.gene40400:CDS |
| TTGAGGAAGAGGCAGAAGAC+GGG | 0.457591 | 7.2:-14658054 | MS.gene40400:CDS |
| GTATCGCGCACACTGCTTGA+AGG | 0.459806 | 7.2:+14657756 | None:intergenic |
| CGATAGCCAGCCTAATATAA+TGG | 0.465023 | 7.2:+14654794 | None:intergenic |
| GAGGATGGTGATGGTGGTGC+TGG | 0.465798 | 7.2:-14657985 | MS.gene40400:CDS |
| GCTGTTGAATGAGTGGAAAC+AGG | 0.467823 | 7.2:-14657839 | MS.gene40400:CDS |
| AGTCGTCTGAGGAGAGGCTT+AGG | 0.468760 | 7.2:-14654510 | MS.gene40400:CDS |
| GCTGGATGAAGCAGCGGCGG+AGG | 0.472515 | 7.2:+14658296 | None:intergenic |
| GACGGCTAAAGGGAAGTCTA+TGG | 0.476462 | 7.2:-14657785 | MS.gene40400:CDS |
| CAATCCCTAGCCGAAGAAAC+CGG | 0.477260 | 7.2:-14658486 | MS.gene40400:CDS |
| TTAGCAGAAGAGAGATTTAG+TGG | 0.482256 | 7.2:-14654541 | MS.gene40400:CDS |
| GGGAATGCTCCCTGGCCTAT+CGG | 0.486347 | 7.2:-14654772 | MS.gene40400:CDS |
| CATTATATTAGGCTGGCTAT+CGG | 0.487299 | 7.2:-14654793 | MS.gene40400:CDS |
| TCCTACAAAACTTAAACAGC+GGG | 0.493480 | 7.2:+14657728 | None:intergenic |
| GATGATGATTTGAGTGATTG+TGG | 0.495482 | 7.2:-14657961 | MS.gene40400:CDS |
| CTGCTTTAGATGGCAGTGTC+GGG | 0.496151 | 7.2:+14654608 | None:intergenic |
| TGATTTCTTGCGTGATATTG+CGG | 0.497819 | 7.2:-14658079 | MS.gene40400:CDS |
| AGGTTCTTCAGGATGACATT+CGG | 0.502212 | 7.2:-14654876 | MS.gene40400:CDS |
| GCCGCCGGTTTCTTCGGCTA+GGG | 0.511048 | 7.2:+14658482 | None:intergenic |
| TGATAGGAAGCGGCAGAAAG+TGG | 0.511616 | 7.2:-14658022 | MS.gene40400:CDS |
| ATTATATTAGGCTGGCTATC+GGG | 0.513000 | 7.2:-14654792 | MS.gene40400:CDS |
| TGCCGCCGGTTTCTTCGGCT+AGG | 0.513870 | 7.2:+14658481 | None:intergenic |
| TAGTGGTGGTGATAATGATA+AGG | 0.515615 | 7.2:-14657932 | MS.gene40400:CDS |
| CATAGTAACACCGATAGGCC+AGG | 0.517646 | 7.2:+14654762 | None:intergenic |
| TAAGGATTTGAAAAGGATGA+AGG | 0.521027 | 7.2:-14657914 | MS.gene40400:CDS |
| TCTCCGGTTTCTCAAACAAC+CGG | 0.524686 | 7.2:-14658208 | MS.gene40400:CDS |
| TGAGAAGCTCTTGCTTTAGG+AGG | 0.527588 | 7.2:+14658517 | None:intergenic |
| GTTGCGTGAGATGGCGGAGA+CGG | 0.528632 | 7.2:-14657815 | MS.gene40400:CDS |
| GGTGGAGACGGTGTCGGAGG+TGG | 0.529873 | 7.2:+14658356 | None:intergenic |
| AGTGATTGTGGTGGATCTAG+TGG | 0.530233 | 7.2:-14657949 | MS.gene40400:CDS |
| GCGAGATTATCTGGCTGCAA+TGG | 0.530625 | 7.2:-14654818 | MS.gene40400:CDS |
| CAAAGCTGGATTGTTTGAAG+TGG | 0.534244 | 7.2:-14658130 | MS.gene40400:CDS |
| AATTAACTATCTCTTGGAGC+AGG | 0.536566 | 7.2:+14654481 | None:intergenic |
| CCTATCGGTGTTACTATGGT+TGG | 0.537411 | 7.2:-14654757 | MS.gene40400:CDS |
| CTTCTTGTTTAGGAAGGACG+AGG | 0.539570 | 7.2:+14658241 | None:intergenic |
| ATAATGATAAGGATTTGAAA+AGG | 0.540471 | 7.2:-14657921 | MS.gene40400:CDS |
| AGCAGCGGCGGAGGTGACAG+AGG | 0.541237 | 7.2:+14658305 | None:intergenic |
| TTAAGAAGCTGTTGAATGAG+TGG | 0.541386 | 7.2:-14657846 | MS.gene40400:CDS |
| TCTTCAGGATGACATTCGGC+AGG | 0.544712 | 7.2:-14654872 | MS.gene40400:CDS |
| AATGGACCATTATATTAGGC+TGG | 0.547140 | 7.2:-14654800 | MS.gene40400:CDS |
| GTTGAGGAAGAGGCAGAAGA+CGG | 0.547478 | 7.2:-14658055 | MS.gene40400:CDS |
| GGTGCTGCTGAGGATGGTGA+TGG | 0.548826 | 7.2:-14657994 | MS.gene40400:CDS |
| TAGCAGAAGAGAGATTTAGT+GGG | 0.549817 | 7.2:-14654540 | MS.gene40400:CDS |
| ACTGCTTTAGATGGCAGTGT+CGG | 0.551623 | 7.2:+14654607 | None:intergenic |
| TTCCTACAAAACTTAAACAG+CGG | 0.554797 | 7.2:+14657727 | None:intergenic |
| GGATGACTTCTTGTTTAGGA+AGG | 0.558895 | 7.2:+14658235 | None:intergenic |
| AGCGGCGGAGGTGACAGAGG+AGG | 0.560266 | 7.2:+14658308 | None:intergenic |
| TTTGAAGAATTTCTTGCCGC+CGG | 0.562591 | 7.2:+14658467 | None:intergenic |
| TGATGGTTGACTGCTGTATG+AGG | 0.563302 | 7.2:-14654840 | MS.gene40400:CDS |
| GGAGGAAGCGTTGGTTGATG+AGG | 0.572723 | 7.2:+14658326 | None:intergenic |
| TGAAGTGGATAGTGATATGA+CGG | 0.577757 | 7.2:-14658115 | MS.gene40400:CDS |
| ACAGGAGTTGCGTGAGATGG+CGG | 0.582423 | 7.2:-14657821 | MS.gene40400:CDS |
| GCTGCTGAGGATGGTGATGG+TGG | 0.582674 | 7.2:-14657991 | MS.gene40400:CDS |
| GGTGACAGAGGAGGAAGCGT+TGG | 0.585054 | 7.2:+14658317 | None:intergenic |
| GAGGATGGTGCTGCTGAGGA+TGG | 0.586492 | 7.2:-14658000 | MS.gene40400:CDS |
| AGCAGAAGAGAGATTTAGTG+GGG | 0.589925 | 7.2:-14654539 | MS.gene40400:CDS |
| GCAGTGTCGGGTAACGCCGT+TGG | 0.590389 | 7.2:+14654620 | None:intergenic |
| TCTTCACCGAATAGCGTCAC+CGG | 0.592811 | 7.2:+14658189 | None:intergenic |
| AGCGCTGGATGAAGCAGCGG+CGG | 0.595214 | 7.2:+14658293 | None:intergenic |
| ATATTGCGGAGTTGAGGAAG+AGG | 0.597099 | 7.2:-14658065 | MS.gene40400:CDS |
| GAAACAGGAGTTGCGTGAGA+TGG | 0.597500 | 7.2:-14657824 | MS.gene40400:CDS |
| ACGACGATGCGAGACTCGAT+CGG | 0.599979 | 7.2:-14658167 | MS.gene40400:CDS |
| AGATGGCGGAGACGGAGAAG+CGG | 0.603954 | 7.2:-14657807 | MS.gene40400:CDS |
| GGCGGAGACGGAGAAGCGGA+CGG | 0.607467 | 7.2:-14657803 | MS.gene40400:CDS |
| TGAGGAAGAGGCAGAAGACG+GGG | 0.610880 | 7.2:-14658053 | MS.gene40400:CDS |
| GATTGTGGTGGATCTAGTGG+TGG | 0.612515 | 7.2:-14657946 | MS.gene40400:CDS |
| AGTACTTACAATCAGTGAAG+AGG | 0.612562 | 7.2:-14654657 | MS.gene40400:CDS |
| GTTGGTTGATGAGGTTGCTA+CGG | 0.616484 | 7.2:+14658335 | None:intergenic |
| TGCTACGGTGGAGACGGTGT+CGG | 0.619572 | 7.2:+14658350 | None:intergenic |
| GGAAGCGCTGGATGAAGCAG+CGG | 0.620240 | 7.2:+14658290 | None:intergenic |
| TGCGTGATATTGCGGAGTTG+AGG | 0.622575 | 7.2:-14658071 | MS.gene40400:CDS |
| GCAATCAGTCGTCTGAGGAG+AGG | 0.632643 | 7.2:-14654516 | MS.gene40400:CDS |
| AGTGGAGGATGGTGCTGCTG+AGG | 0.635778 | 7.2:-14658004 | MS.gene40400:CDS |
| TACGGTGGAGACGGTGTCGG+AGG | 0.637334 | 7.2:+14658353 | None:intergenic |
| GTGGATAGTGATATGACGGA+GGG | 0.638405 | 7.2:-14658111 | MS.gene40400:CDS |
| TGAGGTTGCTACGGTGGAGA+CGG | 0.639983 | 7.2:+14658344 | None:intergenic |
| GTTTGAGAAACCGGAGACGG+CGG | 0.644055 | 7.2:+14658214 | None:intergenic |
| GTTGTTTGAGAAACCGGAGA+CGG | 0.645243 | 7.2:+14658211 | None:intergenic |
| ATAGTAACACCGATAGGCCA+GGG | 0.645385 | 7.2:+14654763 | None:intergenic |
| GATGATTTGAGTGATTGTGG+TGG | 0.645582 | 7.2:-14657958 | MS.gene40400:CDS |
| AAGCGGCAGAAAGTGGAGGA+TGG | 0.649587 | 7.2:-14658015 | MS.gene40400:CDS |
| GGTTGATGAGGTTGCTACGG+TGG | 0.653309 | 7.2:+14658338 | None:intergenic |
| CCAACCATAGTAACACCGAT+AGG | 0.659700 | 7.2:+14654757 | None:intergenic |
| GCAGAAGAGAGATTTAGTGG+GGG | 0.669816 | 7.2:-14654538 | MS.gene40400:CDS |
| TAGGAAGCGGCAGAAAGTGG+AGG | 0.670822 | 7.2:-14658019 | MS.gene40400:CDS |
| TTTCGATGAGCTGTGTGATG+AGG | 0.689854 | 7.2:-14657887 | MS.gene40400:CDS |
| TCCCTAGCCGAAGAAACCGG+CGG | 0.703034 | 7.2:-14658483 | MS.gene40400:CDS |
| AGTGGATAGTGATATGACGG+AGG | 0.712150 | 7.2:-14658112 | MS.gene40400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTTTAATATACAATC+AGG | - | chr7.2:14656042-14656061 | MS.gene40400:intron | 15.0% |
| !! | TATCTTAAAGATATTCTATT+TGG | - | chr7.2:14657768-14657787 | MS.gene40400:CDS | 15.0% |
| !! | TTGTATTCTAACTAATAAAA+TGG | - | chr7.2:14658088-14658107 | MS.gene40400:CDS | 15.0% |
| !!! | AATAGTATTTTATTTTCACA+TGG | - | chr7.2:14655852-14655871 | MS.gene40400:intron | 15.0% |
| !!! | AGAATATCTTTAAGATAAAA+GGG | + | chr7.2:14657765-14657784 | None:intergenic | 15.0% |
| !!! | AGTTTAAAACAAATTGAATT+AGG | - | chr7.2:14655535-14655554 | MS.gene40400:intron | 15.0% |
| !!! | GGCAATTTTATATTTTATTT+TGG | - | chr7.2:14656913-14656932 | MS.gene40400:intron | 15.0% |
| !!! | TAGAATATCTTTAAGATAAA+AGG | + | chr7.2:14657766-14657785 | None:intergenic | 15.0% |
| !!! | TAGATGTTTTATATTTTTGT+TGG | - | chr7.2:14655748-14655767 | MS.gene40400:intron | 15.0% |
| !!! | TTATATTTTATTTTGGATTC+TGG | - | chr7.2:14656920-14656939 | MS.gene40400:intron | 15.0% |
| !!! | TTGAATTTTACTGTATAAAT+GGG | - | chr7.2:14657698-14657717 | MS.gene40400:intron | 15.0% |
| !! | AAATATGATTGAAGTTGTAA+AGG | - | chr7.2:14657234-14657253 | MS.gene40400:intron | 20.0% |
| !! | AAGATATTCTATTTGGATAT+CGG | - | chr7.2:14657775-14657794 | MS.gene40400:CDS | 20.0% |
| !! | ATAATGATAAGGATTTGAAA+AGG | - | chr7.2:14655084-14655103 | MS.gene40400:intron | 20.0% |
| !! | CAAAGAATTCAATAATAACA+AGG | + | chr7.2:14657497-14657516 | None:intergenic | 20.0% |
| !! | GAAAATAACATGATATTTGA+TGG | - | chr7.2:14656892-14656911 | MS.gene40400:intron | 20.0% |
| !! | TAATTGGATAGTTAATCTTA+GGG | - | chr7.2:14655473-14655492 | MS.gene40400:intron | 20.0% |
| !!! | CTTGTTATTATTGAATTCTT+TGG | - | chr7.2:14657495-14657514 | MS.gene40400:intron | 20.0% |
| !!! | GTTGAATTTTACTGTATAAA+TGG | - | chr7.2:14657697-14657716 | MS.gene40400:intron | 20.0% |
| !!! | TTATATTTTAAGGTGAGTTT+TGG | - | chr7.2:14655641-14655660 | MS.gene40400:intron | 20.0% |
| !!! | TTATATTTTTGTTGGAAATG+CGG | - | chr7.2:14655756-14655775 | MS.gene40400:intron | 20.0% |
| !!! | TTATGCAAATTATTAAGTTG+CGG | + | chr7.2:14656870-14656889 | None:intergenic | 20.0% |
| ! | AAAACAAATTGAATTAGGAG+TGG | - | chr7.2:14655540-14655559 | MS.gene40400:intron | 25.0% |
| ! | AAACTTTAGTGAATTTGATG+TGG | - | chr7.2:14656968-14656987 | MS.gene40400:intron | 25.0% |
| ! | AAATATCCAATCTATAGTGT+AGG | + | chr7.2:14656417-14656436 | None:intergenic | 25.0% |
| ! | AATACAAAGAACAACTAACA+AGG | + | chr7.2:14656199-14656218 | None:intergenic | 25.0% |
| ! | AATTATGGTAGGATATGTTA+AGG | - | chr7.2:14655674-14655693 | MS.gene40400:intron | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | - | chr7.2:14657092-14657111 | MS.gene40400:intron | 25.0% |
| ! | ATCCACTTTATTCATGTAAA+CGG | - | chr7.2:14656568-14656587 | MS.gene40400:intron | 25.0% |
| ! | CAAATCATATGTTTCAAATG+TGG | + | chr7.2:14656093-14656112 | None:intergenic | 25.0% |
| ! | CTAATTGGATAGTTAATCTT+AGG | - | chr7.2:14655472-14655491 | MS.gene40400:intron | 25.0% |
| ! | CTTTGTATTATATGTCTTAG+AGG | - | chr7.2:14656210-14656229 | MS.gene40400:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr7.2:14657120-14657139 | None:intergenic | 25.0% |
| ! | TACAATATTCTTGTGTATCT+AGG | + | chr7.2:14655617-14655636 | None:intergenic | 25.0% |
| ! | TATTTGGATATCGGTAATAT+AGG | - | chr7.2:14657784-14657803 | MS.gene40400:CDS | 25.0% |
| ! | TCTAACTAATAAAATGGATG+TGG | - | chr7.2:14658094-14658113 | MS.gene40400:CDS | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr7.2:14657124-14657143 | MS.gene40400:intron | 25.0% |
| ! | TTAATATACAATCAGGACTT+AGG | - | chr7.2:14656049-14656068 | MS.gene40400:intron | 25.0% |
| ! | TTATCCATGCAAAAAGTAAA+CGG | - | chr7.2:14656482-14656501 | MS.gene40400:intron | 25.0% |
| !! | ATCTTCTGTCATTATGTTTT+CGG | - | chr7.2:14655573-14655592 | MS.gene40400:intron | 25.0% |
| !! | CACATTTGAAACATATGATT+TGG | - | chr7.2:14656091-14656110 | MS.gene40400:intron | 25.0% |
| !! | TATTTGTGTAGATCTTTTCA+CGG | + | chr7.2:14658292-14658311 | None:intergenic | 25.0% |
| !!! | GTACTTTTTGTTTGAAAGAT+GGG | - | chr7.2:14656942-14656961 | MS.gene40400:intron | 25.0% |
| !!! | GTATTTGGTGTTAGTTTAAT+AGG | - | chr7.2:14655402-14655421 | MS.gene40400:intron | 25.0% |
| !!! | GTTTAAGTTTTGTAGGAAAA+AGG | - | chr7.2:14655283-14655302 | MS.gene40400:intron | 25.0% |
| !!! | TATATTTTTGTTGGAAATGC+GGG | - | chr7.2:14655757-14655776 | MS.gene40400:intron | 25.0% |
| AAACAATTTGTAAGCATGTC+CGG | + | chr7.2:14656031-14656050 | None:intergenic | 30.0% | |
| AGTTTAACAGTTTGGCAAAT+GGG | - | chr7.2:14658423-14658442 | MS.gene40400:CDS | 30.0% | |
| ATCAAGCAATTCAGTGATAT+GGG | - | chr7.2:14657427-14657446 | MS.gene40400:intron | 30.0% | |
| ATCAGAGTACAGTACAAAAT+TGG | + | chr7.2:14656694-14656713 | None:intergenic | 30.0% | |
| CTACATCTCACTTTAGATTT+GGG | + | chr7.2:14657357-14657376 | None:intergenic | 30.0% | |
| GAATGTGATTGGAAACTAAT+TGG | - | chr7.2:14655457-14655476 | MS.gene40400:intron | 30.0% | |
| GAGGTTTACATGGATAAAAT+TGG | + | chr7.2:14656548-14656567 | None:intergenic | 30.0% | |
| GGGAGAGTTTCTTTAAATTT+AGG | + | chr7.2:14656303-14656322 | None:intergenic | 30.0% | |
| GTTTATATGCACGTATTGTT+GGG | - | chr7.2:14657522-14657541 | MS.gene40400:intron | 30.0% | |
| TAAGGATTTGAAAAGGATGA+AGG | - | chr7.2:14655091-14655110 | MS.gene40400:intron | 30.0% | |
| TACATTCATGATTCCAACTA+CGG | + | chr7.2:14657277-14657296 | None:intergenic | 30.0% | |
| TCTACATCTCACTTTAGATT+TGG | + | chr7.2:14657358-14657377 | None:intergenic | 30.0% | |
| TGAGGTTTACATGAATAAAG+TGG | + | chr7.2:14656573-14656592 | None:intergenic | 30.0% | |
| TGTTTATATGCACGTATTGT+TGG | - | chr7.2:14657521-14657540 | MS.gene40400:intron | 30.0% | |
| TTACATGAATAAAGTGGATG+AGG | + | chr7.2:14656567-14656586 | None:intergenic | 30.0% | |
| TTCCTACAAAACTTAAACAG+CGG | + | chr7.2:14655281-14655300 | None:intergenic | 30.0% | |
| TTCTCTTATATTGTTTCACG+AGG | + | chr7.2:14656277-14656296 | None:intergenic | 30.0% | |
| TTGTACTGTACTCTGATTTA+TGG | - | chr7.2:14656697-14656716 | MS.gene40400:intron | 30.0% | |
| ! | ATTATTAAGTTGCGGTAACA+AGG | + | chr7.2:14656862-14656881 | None:intergenic | 30.0% |
| ! | ATTTGTGTAGATCTTTTCAC+GGG | + | chr7.2:14658291-14658310 | None:intergenic | 30.0% |
| ! | ATTTTACACACCAATTCACA+AGG | + | chr7.2:14657307-14657326 | None:intergenic | 30.0% |
| ! | CTTTTTCCTACACTATAGAT+TGG | - | chr7.2:14656408-14656427 | MS.gene40400:intron | 30.0% |
| ! | GAAACATATGATTTGGATGT+TGG | - | chr7.2:14656098-14656117 | MS.gene40400:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr7.2:14657104-14657123 | MS.gene40400:intron | 30.0% |
| ! | TATTTGAGATCCTATGTCAT+GGG | - | chr7.2:14657963-14657982 | MS.gene40400:CDS | 30.0% |
| ! | TCTGCATTTCACGTATATTT+TGG | - | chr7.2:14657573-14657592 | MS.gene40400:intron | 30.0% |
| ! | TTAAACTCAACTGCTTTAGA+TGG | + | chr7.2:14658410-14658429 | None:intergenic | 30.0% |
| ! | TTATTTGAGATCCTATGTCA+TGG | - | chr7.2:14657962-14657981 | MS.gene40400:CDS | 30.0% |
| ! | TTTGCTATAAATTCCGTAGT+TGG | - | chr7.2:14657261-14657280 | MS.gene40400:intron | 30.0% |
| !! | ACGTATATTTTGGAGAATAC+AGG | - | chr7.2:14657583-14657602 | MS.gene40400:intron | 30.0% |
| !! | ACTGTTTGAACATGTTTTGA+AGG | - | chr7.2:14655799-14655818 | MS.gene40400:intron | 30.0% |
| !! | AGGTTTTAATCTTGTTAGAG+TGG | - | chr7.2:14657603-14657622 | MS.gene40400:intron | 30.0% |
| !! | CACTAAATATCAATTTGCTG+CGG | + | chr7.2:14657813-14657832 | None:intergenic | 30.0% |
| !! | CTGTTTGAACATGTTTTGAA+GGG | - | chr7.2:14655800-14655819 | MS.gene40400:intron | 30.0% |
| !! | GGTACTTTTTGTTTGAAAGA+TGG | - | chr7.2:14656941-14656960 | MS.gene40400:intron | 30.0% |
| !! | TTGGTTCTAAAAATATCCAG+TGG | + | chr7.2:14656675-14656694 | None:intergenic | 30.0% |
| !!! | AGGTGAGTTTTATTCTGTTT+AGG | - | chr7.2:14655303-14655322 | MS.gene40400:intron | 30.0% |
| !!! | GTTTTTGGATTTGTTTCTGT+TGG | + | chr7.2:14654575-14654594 | None:intergenic | 30.0% |
| !!! | TGTTTTGACTCAGGAAATTT+AGG | - | chr7.2:14657659-14657678 | MS.gene40400:intron | 30.0% |
| !!! | TTGTTCTTTTGTTTTGACTC+AGG | - | chr7.2:14657650-14657669 | MS.gene40400:intron | 30.0% |
| !!! | TTTTAAGGTGAGTTTTGGAA+AGG | - | chr7.2:14655646-14655665 | MS.gene40400:intron | 30.0% |
| AACACCAAATACCAGAAAAG+TGG | + | chr7.2:14655394-14655413 | None:intergenic | 35.0% | |
| AATGGACCATTATATTAGGC+TGG | - | chr7.2:14658205-14658224 | MS.gene40400:CDS | 35.0% | |
| ACAAATTGAATTAGGAGTGG+TGG | - | chr7.2:14655543-14655562 | MS.gene40400:intron | 35.0% | |
| ACTTCACTATGTTCCCATTT+CGG | + | chr7.2:14655518-14655537 | None:intergenic | 35.0% | |
| AGCAGTTGAGTTTAACAGTT+TGG | - | chr7.2:14658415-14658434 | MS.gene40400:CDS | 35.0% | |
| AGTACTTACAATCAGTGAAG+AGG | - | chr7.2:14658348-14658367 | MS.gene40400:CDS | 35.0% | |
| AGTCTTTAAACACTCCAAGA+GGG | + | chr7.2:14657629-14657648 | None:intergenic | 35.0% | |
| ATATACAATCAGGACTTAGG+AGG | - | chr7.2:14656052-14656071 | MS.gene40400:intron | 35.0% | |
| ATCAGAGTACAGTACAACAT+TGG | + | chr7.2:14656446-14656465 | None:intergenic | 35.0% | |
| ATCCACCTTATCCTTGTAAA+CGG | - | chr7.2:14656334-14656353 | MS.gene40400:intron | 35.0% | |
| CAAATTGAATTAGGAGTGGT+GGG | - | chr7.2:14655544-14655563 | MS.gene40400:intron | 35.0% | |
| CAACGCAATACTAAGACAAA+TGG | + | chr7.2:14657895-14657914 | None:intergenic | 35.0% | |
| CACCGTTTACATGAATAAAG+TGG | + | chr7.2:14656597-14656616 | None:intergenic | 35.0% | |
| CTAAAGTGAGATGTAGAACT+GGG | - | chr7.2:14657361-14657380 | MS.gene40400:intron | 35.0% | |
| CTGCAATGGACCATTATATT+AGG | - | chr7.2:14658201-14658220 | MS.gene40400:CDS | 35.0% | |
| CTTAAATACGTTCTCAAAGC+TGG | - | chr7.2:14654861-14654880 | MS.gene40400:CDS | 35.0% | |
| GAGTTTAACAGTTTGGCAAA+TGG | - | chr7.2:14658422-14658441 | MS.gene40400:CDS | 35.0% | |
| GATCAAGCAATTCAGTGATA+TGG | - | chr7.2:14657426-14657445 | MS.gene40400:intron | 35.0% | |
| GATCTCAAATAACCAGCTAA+GGG | + | chr7.2:14657954-14657973 | None:intergenic | 35.0% | |
| GATGATGATTTGAGTGATTG+TGG | - | chr7.2:14655044-14655063 | MS.gene40400:intron | 35.0% | |
| GTATAAATGGGAACTCTTGA+AGG | - | chr7.2:14657710-14657729 | MS.gene40400:intron | 35.0% | |
| GTGAGTAGTTGTACTTTGTT+TGG | - | chr7.2:14657830-14657849 | MS.gene40400:CDS | 35.0% | |
| TAAAGTGGATGAGGTTTACA+TGG | + | chr7.2:14656558-14656577 | None:intergenic | 35.0% | |
| TAGGAAAACTTACATGCTAG+TGG | - | chr7.2:14655421-14655440 | MS.gene40400:intron | 35.0% | |
| TAGTCTTTAAACACTCCAAG+AGG | + | chr7.2:14657630-14657649 | None:intergenic | 35.0% | |
| TCCTACAAAACTTAAACAGC+GGG | + | chr7.2:14655280-14655299 | None:intergenic | 35.0% | |
| TGAAGTGGATAGTGATATGA+CGG | - | chr7.2:14654890-14654909 | MS.gene40400:intron | 35.0% | |
| TGATTTCTTGCGTGATATTG+CGG | - | chr7.2:14654926-14654945 | MS.gene40400:intron | 35.0% | |
| TGCTGTACAGACTACATTAT+TGG | + | chr7.2:14656635-14656654 | None:intergenic | 35.0% | |
| TGTTAACTGTTTGCCGAAAT+GGG | - | chr7.2:14655502-14655521 | MS.gene40400:intron | 35.0% | |
| TTAAGAAGCTGTTGAATGAG+TGG | - | chr7.2:14655159-14655178 | MS.gene40400:intron | 35.0% | |
| TTGTACTGTACTCTGATTCA+TGG | - | chr7.2:14656449-14656468 | MS.gene40400:intron | 35.0% | |
| TTGTTAACTGTTTGCCGAAA+TGG | - | chr7.2:14655501-14655520 | MS.gene40400:intron | 35.0% | |
| TTTGGAAAGGTGGTGAATTA+TGG | - | chr7.2:14655659-14655678 | MS.gene40400:intron | 35.0% | |
| ! | ATTATATTAGGCTGGCTATC+GGG | - | chr7.2:14658213-14658232 | MS.gene40400:CDS | 35.0% |
| ! | CATTATATTAGGCTGGCTAT+CGG | - | chr7.2:14658212-14658231 | MS.gene40400:CDS | 35.0% |
| ! | GAACTCTTGAAGGATTTTAC+TGG | - | chr7.2:14657720-14657739 | MS.gene40400:intron | 35.0% |
| ! | GGTTAATGACATTTTGCCAA+CGG | - | chr7.2:14658369-14658388 | MS.gene40400:CDS | 35.0% |
| ! | GTGTGATGAGGATAAGATTT+TGG | - | chr7.2:14655130-14655149 | MS.gene40400:intron | 35.0% |
| ! | TAGTGGTGGTGATAATGATA+AGG | - | chr7.2:14655073-14655092 | MS.gene40400:intron | 35.0% |
| ! | TATTTTCACATGGAGAGTGA+AGG | - | chr7.2:14655862-14655881 | MS.gene40400:intron | 35.0% |
| ! | TCTAAAGTGAGATGTAGAAC+TGG | - | chr7.2:14657360-14657379 | MS.gene40400:intron | 35.0% |
| ! | TGAAGGATTTTACTGGACTT+GGG | - | chr7.2:14657727-14657746 | MS.gene40400:CDS | 35.0% |
| ! | TTCTGTCATTATGTTTTCGG+AGG | - | chr7.2:14655576-14655595 | MS.gene40400:intron | 35.0% |
| ! | TTGAAGGATTTTACTGGACT+TGG | - | chr7.2:14657726-14657745 | MS.gene40400:CDS | 35.0% |
| ! | TTTTACCTTGCATTTGTGAG+AGG | - | chr7.2:14655921-14655940 | MS.gene40400:intron | 35.0% |
| ! | TTTTCGGAGGACTTTTTGTA+TGG | - | chr7.2:14655589-14655608 | MS.gene40400:intron | 35.0% |
| !! | AAGCCTTATTTCACTAAGTG+GGG | + | chr7.2:14657173-14657192 | None:intergenic | 35.0% |
| !! | AAGGTGGATGAGGTTTTAAT+GGG | + | chr7.2:14656323-14656342 | None:intergenic | 35.0% |
| !! | CAAACCACTTTTCTGGTATT+TGG | - | chr7.2:14655387-14655406 | MS.gene40400:intron | 35.0% |
| !! | CAAGCCTTATTTCACTAAGT+GGG | + | chr7.2:14657174-14657193 | None:intergenic | 35.0% |
| !! | CATTTAGCAAACCACTTTTC+TGG | - | chr7.2:14655380-14655399 | MS.gene40400:intron | 35.0% |
| !! | GAGGTATTTATCCTTTTGCA+CGG | + | chr7.2:14656258-14656277 | None:intergenic | 35.0% |
| !! | TAAGGTGGATGAGGTTTTAA+TGG | + | chr7.2:14656324-14656343 | None:intergenic | 35.0% |
| !! | TTTTGAGAAGCTCTTGCTTT+AGG | + | chr7.2:14654494-14654513 | None:intergenic | 35.0% |
| !!! | TGAGTTGCGTTTTTTGGATT+TGG | + | chr7.2:14654628-14654647 | None:intergenic | 35.0% |
| AAGAACCTATTACACAAGCC+CGG | + | chr7.2:14657872-14657891 | None:intergenic | 40.0% | |
| AATCACACCACAAAAGCAGA+GGG | + | chr7.2:14656133-14656152 | None:intergenic | 40.0% | |
| AGGTTCTTCAGGATGACATT+CGG | - | chr7.2:14658129-14658148 | MS.gene40400:CDS | 40.0% | |
| ATCAACCTCTCACAAATGCA+AGG | + | chr7.2:14655929-14655948 | None:intergenic | 40.0% | |
| CAAAGCTGGATTGTTTGAAG+TGG | - | chr7.2:14654875-14654894 | MS.gene40400:CDS | 40.0% | |
| CCACTTAGTGAAATAAGGCT+TGG | - | chr7.2:14657172-14657191 | MS.gene40400:intron | 40.0% | |
| CGATAGCCAGCCTAATATAA+TGG | + | chr7.2:14658214-14658233 | None:intergenic | 40.0% | |
| CTGCACTTGAATCTCAATCA+AGG | + | chr7.2:14656765-14656784 | None:intergenic | 40.0% | |
| CTTATTTCACTAAGTGGGGT+CGG | + | chr7.2:14657169-14657188 | None:intergenic | 40.0% | |
| GAAAGGTGGTGAATTATGGT+AGG | - | chr7.2:14655663-14655682 | MS.gene40400:intron | 40.0% | |
| GATATGAAATGTGTCAGTGC+TGG | - | chr7.2:14658048-14658067 | MS.gene40400:CDS | 40.0% | |
| GATGATTTGAGTGATTGTGG+TGG | - | chr7.2:14655047-14655066 | MS.gene40400:intron | 40.0% | |
| GGATCTCAAATAACCAGCTA+AGG | + | chr7.2:14657955-14657974 | None:intergenic | 40.0% | |
| GTTGAAGCAACAATTGGAGT+TGG | + | chr7.2:14655990-14656009 | None:intergenic | 40.0% | |
| TACATGCTAGTGGAATGCAT+CGG | - | chr7.2:14655431-14655450 | MS.gene40400:intron | 40.0% | |
| TCAAACTGGTAGCACCAATA+AGG | - | chr7.2:14656360-14656379 | MS.gene40400:intron | 40.0% | |
| TCATAGTCGTTCCTTTCTAG+TGG | - | chr7.2:14656163-14656182 | MS.gene40400:intron | 40.0% | |
| TGCTGTGCAGACTACATTAT+TGG | + | chr7.2:14656525-14656544 | None:intergenic | 40.0% | |
| TGCTGTGCATACTACCTTAT+TGG | + | chr7.2:14656377-14656396 | None:intergenic | 40.0% | |
| TTACAAGGATAAGGTGGATG+AGG | + | chr7.2:14656333-14656352 | None:intergenic | 40.0% | |
| TTTGAAGAATTTCTTGCCGC+CGG | + | chr7.2:14654541-14654560 | None:intergenic | 40.0% | |
| ! | AAACTAGAGACGTTTTCCAC+TGG | - | chr7.2:14656656-14656675 | MS.gene40400:intron | 40.0% |
| ! | GGATGACTTCTTGTTTAGGA+AGG | + | chr7.2:14654773-14654792 | None:intergenic | 40.0% |
| ! | GTATTCTCAGCCTTGTGAAT+TGG | - | chr7.2:14657294-14657313 | MS.gene40400:intron | 40.0% |
| ! | TTTCTTCTTCGCGGAGTTTT+TGG | + | chr7.2:14654590-14654609 | None:intergenic | 40.0% |
| !! | AAGGTCACAAGTTTGAGTTG+TGG | + | chr7.2:14655953-14655972 | None:intergenic | 40.0% |
| !! | AATGCTTAGCTTTGTAGCAG+TGG | - | chr7.2:14656810-14656829 | MS.gene40400:intron | 40.0% |
| !! | ACCCGCTGTTTAAGTTTTGT+AGG | - | chr7.2:14655276-14655295 | MS.gene40400:intron | 40.0% |
| !! | ATGCTTAGCTTTGTAGCAGT+GGG | - | chr7.2:14656811-14656830 | MS.gene40400:intron | 40.0% |
| !! | CCAAGCCTTATTTCACTAAG+TGG | + | chr7.2:14657175-14657194 | None:intergenic | 40.0% |
| !! | CTGTCTATGTTTTGTTCGTC+GGG | + | chr7.2:14654744-14654763 | None:intergenic | 40.0% |
| !! | GCTGTCTATGTTTTGTTCGT+CGG | + | chr7.2:14654745-14654764 | None:intergenic | 40.0% |
| !! | GGATTTTGAGTGATAGGAAG+CGG | - | chr7.2:14654973-14654992 | MS.gene40400:intron | 40.0% |
| !! | TGCATCGGTTAGAATGTGAT+TGG | - | chr7.2:14655446-14655465 | MS.gene40400:intron | 40.0% |
| !! | TGTCTATGTTTTGTTCGTCG+GGG | + | chr7.2:14654743-14654762 | None:intergenic | 40.0% |
| !! | TTTTATCCCCTCTGCTTTTG+TGG | - | chr7.2:14656123-14656142 | MS.gene40400:intron | 40.0% |
| !!! | AGCACCGTTTACTTTTTGCA+TGG | + | chr7.2:14656489-14656508 | None:intergenic | 40.0% |
| !!! | TAAGGTGAGTTTTGGAAAGG+TGG | - | chr7.2:14655649-14655668 | MS.gene40400:intron | 40.0% |
| AAACAACCGGTGACGCTATT+CGG | - | chr7.2:14654810-14654829 | MS.gene40400:CDS | 45.0% | |
| AAGAAGTTCTGCCGTGCAAA+AGG | - | chr7.2:14656244-14656263 | MS.gene40400:intron | 45.0% | |
| AGTGGATAGTGATATGACGG+AGG | - | chr7.2:14654893-14654912 | MS.gene40400:intron | 45.0% | |
| ATAGTAACACCGATAGGCCA+GGG | + | chr7.2:14658245-14658264 | None:intergenic | 45.0% | |
| ATATTGCGGAGTTGAGGAAG+AGG | - | chr7.2:14654940-14654959 | MS.gene40400:intron | 45.0% | |
| ATCACACCACAAAAGCAGAG+GGG | + | chr7.2:14656132-14656151 | None:intergenic | 45.0% | |
| ATGTCTGACACCCATGACAT+AGG | + | chr7.2:14657976-14657995 | None:intergenic | 45.0% | |
| CACCGTTTACAAGGATAAGG+TGG | + | chr7.2:14656339-14656358 | None:intergenic | 45.0% | |
| CCAACCATAGTAACACCGAT+AGG | + | chr7.2:14658251-14658270 | None:intergenic | 45.0% | |
| CGACCCCACTTAGTGAAATA+AGG | - | chr7.2:14657167-14657186 | MS.gene40400:intron | 45.0% | |
| CTCAAATAACCAGCTAAGGG+AGG | + | chr7.2:14657951-14657970 | None:intergenic | 45.0% | |
| CTGTATGAGGCGAGATTATC+TGG | - | chr7.2:14658178-14658197 | MS.gene40400:CDS | 45.0% | |
| CTTGTAAACGGTGCTCAAAC+TGG | - | chr7.2:14656346-14656365 | MS.gene40400:intron | 45.0% | |
| GAATCACACCACAAAAGCAG+AGG | + | chr7.2:14656134-14656153 | None:intergenic | 45.0% | |
| GCTCAAATCCTCCACTAGAA+AGG | + | chr7.2:14656177-14656196 | None:intergenic | 45.0% | |
| GCTGTTGAATGAGTGGAAAC+AGG | - | chr7.2:14655166-14655185 | MS.gene40400:intron | 45.0% | |
| GTTGTTTGAGAAACCGGAGA+CGG | + | chr7.2:14654797-14654816 | None:intergenic | 45.0% | |
| TATGACCGGGCTTGTGTAAT+AGG | - | chr7.2:14657864-14657883 | MS.gene40400:CDS | 45.0% | |
| TCACATGGAGAGTGAAGGAA+AGG | - | chr7.2:14655867-14655886 | MS.gene40400:intron | 45.0% | |
| TCTCCGGTTTCTCAAACAAC+CGG | - | chr7.2:14654797-14654816 | MS.gene40400:CDS | 45.0% | |
| TGATGGTTGACTGCTGTATG+AGG | - | chr7.2:14658165-14658184 | MS.gene40400:CDS | 45.0% | |
| TGGATGACTCAGTCTATGAC+CGG | - | chr7.2:14657850-14657869 | MS.gene40400:CDS | 45.0% | |
| TTTCGATGAGCTGTGTGATG+AGG | - | chr7.2:14655118-14655137 | MS.gene40400:intron | 45.0% | |
| ! | AATCAGGACTTAGGAGGCAT+TGG | - | chr7.2:14656058-14656077 | MS.gene40400:intron | 45.0% |
| ! | ACTGCTTTAGATGGCAGTGT+CGG | + | chr7.2:14658401-14658420 | None:intergenic | 45.0% |
| ! | CAGTTTGAGCACCGTTTACA+AGG | + | chr7.2:14656348-14656367 | None:intergenic | 45.0% |
| ! | CTTCTTGTTTAGGAAGGACG+AGG | + | chr7.2:14654767-14654786 | None:intergenic | 45.0% |
| ! | GAGCACCGTTTACAAGGATA+AGG | + | chr7.2:14656342-14656361 | None:intergenic | 45.0% |
| ! | GCATGTACTTCAGGTTCTTC+AGG | - | chr7.2:14658118-14658137 | MS.gene40400:CDS | 45.0% |
| ! | GTGGATAGTGATATGACGGA+GGG | - | chr7.2:14654894-14654913 | MS.gene40400:intron | 45.0% |
| ! | GTTCGCGTTTTTCTTCTTCG+CGG | + | chr7.2:14654599-14654618 | None:intergenic | 45.0% |
| ! | TAGTCGTTCCTTTCTAGTGG+AGG | - | chr7.2:14656166-14656185 | MS.gene40400:intron | 45.0% |
| ! | TCACCGGTTGTTTGAGAAAC+CGG | + | chr7.2:14654803-14654822 | None:intergenic | 45.0% |
| ! | TCCAATTGTTGCTTCAACGC+TGG | - | chr7.2:14655992-14656011 | MS.gene40400:intron | 45.0% |
| ! | TCCAGCGTTGAAGCAACAAT+TGG | + | chr7.2:14655996-14656015 | None:intergenic | 45.0% |
| ! | TGAGAAGCTCTTGCTTTAGG+AGG | + | chr7.2:14654491-14654510 | None:intergenic | 45.0% |
| ! | TTTTGCACGGCAGAACTTCT+TGG | + | chr7.2:14656245-14656264 | None:intergenic | 45.0% |
| !! | AGACGGGGATTTTGAGTGAT+AGG | - | chr7.2:14654967-14654986 | MS.gene40400:intron | 45.0% |
| !! | AGTGATTGTGGTGGATCTAG+TGG | - | chr7.2:14655056-14655075 | MS.gene40400:intron | 45.0% |
| !! | CCTATCGGTGTTACTATGGT+TGG | - | chr7.2:14658248-14658267 | MS.gene40400:CDS | 45.0% |
| !! | GTTGGTTGATGAGGTTGCTA+CGG | + | chr7.2:14654673-14654692 | None:intergenic | 45.0% |
| !! | TATGTTTTGTTCGTCGGGGA+GGG | + | chr7.2:14654739-14654758 | None:intergenic | 45.0% |
| !! | TGCTTAGCTTTGTAGCAGTG+GGG | - | chr7.2:14656812-14656831 | MS.gene40400:intron | 45.0% |
| !!! | GGTGGTTGAGTTGCGTTTTT+TGG | + | chr7.2:14654634-14654653 | None:intergenic | 45.0% |
| !!! | GTTGGTTTTGTGCGACTAGA+AGG | + | chr7.2:14655972-14655991 | None:intergenic | 45.0% |
| !!! | ATTGTATATTTTATATTTTA+AGG | - | chr7.2:14655631-14655650 | MS.gene40400:intron | 5.0% |
| CAATCCCTAGCCGAAGAAAC+CGG | - | chr7.2:14654519-14654538 | MS.gene40400:CDS | 50.0% | |
| CATAGTAACACCGATAGGCC+AGG | + | chr7.2:14658246-14658265 | None:intergenic | 50.0% | |
| GAAACAGGAGTTGCGTGAGA+TGG | - | chr7.2:14655181-14655200 | MS.gene40400:intron | 50.0% | |
| GACGGCTAAAGGGAAGTCTA+TGG | - | chr7.2:14655220-14655239 | MS.gene40400:intron | 50.0% | |
| GAGATGTAGAACTGGGCAAC+TGG | - | chr7.2:14657368-14657387 | MS.gene40400:intron | 50.0% | |
| GCATTCTAACCTCCCTTAGC+TGG | - | chr7.2:14657939-14657958 | MS.gene40400:CDS | 50.0% | |
| GCGAGATTATCTGGCTGCAA+TGG | - | chr7.2:14658187-14658206 | MS.gene40400:CDS | 50.0% | |
| GGATGACTCAGTCTATGACC+GGG | - | chr7.2:14657851-14657870 | MS.gene40400:CDS | 50.0% | |
| GGATGTGGTGCATGTACTTC+AGG | - | chr7.2:14658109-14658128 | MS.gene40400:CDS | 50.0% | |
| GTTGAGGAAGAGGCAGAAGA+CGG | - | chr7.2:14654950-14654969 | MS.gene40400:intron | 50.0% | |
| TCGGCAGGCACTAATGTTGA+TGG | - | chr7.2:14658148-14658167 | MS.gene40400:CDS | 50.0% | |
| TCTTCACCGAATAGCGTCAC+CGG | + | chr7.2:14654819-14654838 | None:intergenic | 50.0% | |
| TCTTCAGGATGACATTCGGC+AGG | - | chr7.2:14658133-14658152 | MS.gene40400:CDS | 50.0% | |
| TCTTGTTAGAGTGGCCCTCT+TGG | - | chr7.2:14657612-14657631 | MS.gene40400:intron | 50.0% | |
| TGATAGGAAGCGGCAGAAAG+TGG | - | chr7.2:14654983-14655002 | MS.gene40400:intron | 50.0% | |
| TGCGTGATATTGCGGAGTTG+AGG | - | chr7.2:14654934-14654953 | MS.gene40400:intron | 50.0% | |
| TTGAGGAAGAGGCAGAAGAC+GGG | - | chr7.2:14654951-14654970 | MS.gene40400:intron | 50.0% | |
| ! | CGGCGGATGACTTCTTGTTT+AGG | + | chr7.2:14654777-14654796 | None:intergenic | 50.0% |
| ! | CTGCTTTAGATGGCAGTGTC+GGG | + | chr7.2:14658400-14658419 | None:intergenic | 50.0% |
| !! | CTATGTTTTGTTCGTCGGGG+AGG | + | chr7.2:14654740-14654759 | None:intergenic | 50.0% |
| !! | CTGGCCTATCGGTGTTACTA+TGG | - | chr7.2:14658244-14658263 | MS.gene40400:CDS | 50.0% |
| !! | GATTGTGGTGGATCTAGTGG+TGG | - | chr7.2:14655059-14655078 | MS.gene40400:intron | 50.0% |
| !! | TTTCTTGCCGCCGGTTTCTT+CGG | + | chr7.2:14654532-14654551 | None:intergenic | 50.0% |
| AAGAAGTCATCCGCCGTCTC+CGG | - | chr7.2:14654781-14654800 | MS.gene40400:CDS | 55.0% | |
| AAGCGGCAGAAAGTGGAGGA+TGG | - | chr7.2:14654990-14655009 | MS.gene40400:intron | 55.0% | |
| ACAGGAGTTGCGTGAGATGG+CGG | - | chr7.2:14655184-14655203 | MS.gene40400:intron | 55.0% | |
| ACGACGATGCGAGACTCGAT+CGG | - | chr7.2:14654838-14654857 | MS.gene40400:CDS | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr7.2:14657161-14657180 | None:intergenic | 55.0% | |
| AGTCGTCTGAGGAGAGGCTT+AGG | - | chr7.2:14658495-14658514 | MS.gene40400:CDS | 55.0% | |
| CGGTTTCTTCGGCTAGGGAT+TGG | + | chr7.2:14654521-14654540 | None:intergenic | 55.0% | |
| GCAATCAGTCGTCTGAGGAG+AGG | - | chr7.2:14658489-14658508 | MS.gene40400:CDS | 55.0% | |
| GTATCGCGCACACTGCTTGA+AGG | + | chr7.2:14655252-14655271 | None:intergenic | 55.0% | |
| GTTTGAGAAACCGGAGACGG+CGG | + | chr7.2:14654794-14654813 | None:intergenic | 55.0% | |
| TAGGAAGCGGCAGAAAGTGG+AGG | - | chr7.2:14654986-14655005 | MS.gene40400:intron | 55.0% | |
| TGAGGAAGAGGCAGAAGACG+GGG | - | chr7.2:14654952-14654971 | MS.gene40400:intron | 55.0% | |
| TGAGGTTGCTACGGTGGAGA+CGG | + | chr7.2:14654664-14654683 | None:intergenic | 55.0% | |
| TGGGCAACTGGCGAACATCT+GGG | - | chr7.2:14657380-14657399 | MS.gene40400:intron | 55.0% | |
| !! | GGAGGAAGCGTTGGTTGATG+AGG | + | chr7.2:14654682-14654701 | None:intergenic | 55.0% |
| !! | GGTTGATGAGGTTGCTACGG+TGG | + | chr7.2:14654670-14654689 | None:intergenic | 55.0% |
| ACGGAGAAGCGGACGGCTAA+AGG | - | chr7.2:14655209-14655228 | MS.gene40400:intron | 60.0% | |
| CGCTGGAGAGAACTGCAGAC+CGG | - | chr7.2:14656009-14656028 | MS.gene40400:intron | 60.0% | |
| CGGAGAAGCGGACGGCTAAA+GGG | - | chr7.2:14655210-14655229 | MS.gene40400:intron | 60.0% | |
| CTGGGCAACTGGCGAACATC+TGG | - | chr7.2:14657379-14657398 | MS.gene40400:intron | 60.0% | |
| GGCAACTGGCGAACATCTGG+GGG | - | chr7.2:14657382-14657401 | MS.gene40400:intron | 60.0% | |
| GGGAATGCTCCCTGGCCTAT+CGG | - | chr7.2:14658233-14658252 | MS.gene40400:CDS | 60.0% | |
| GGGCAACTGGCGAACATCTG+GGG | - | chr7.2:14657381-14657400 | MS.gene40400:intron | 60.0% | |
| TCCCTAGCCGAAGAAACCGG+CGG | - | chr7.2:14654522-14654541 | MS.gene40400:CDS | 60.0% | |
| TGCTACGGTGGAGACGGTGT+CGG | + | chr7.2:14654658-14654677 | None:intergenic | 60.0% | |
| TGGCTATCGGGAATGCTCCC+TGG | - | chr7.2:14658225-14658244 | MS.gene40400:CDS | 60.0% | |
| TGGGGGCAATCAGTCGTCTG+AGG | - | chr7.2:14658484-14658503 | MS.gene40400:CDS | 60.0% | |
| ! | GGTGACAGAGGAGGAAGCGT+TGG | + | chr7.2:14654691-14654710 | None:intergenic | 60.0% |
| !! | AGATGGCGGAGACGGAGAAG+CGG | - | chr7.2:14655198-14655217 | MS.gene40400:intron | 60.0% |
| !! | AGTGGAGGATGGTGCTGCTG+AGG | - | chr7.2:14655001-14655020 | MS.gene40400:intron | 60.0% |
| !! | GAGGATGGTGATGGTGGTGC+TGG | - | chr7.2:14655020-14655039 | MS.gene40400:intron | 60.0% |
| !! | GAGGATGGTGCTGCTGAGGA+TGG | - | chr7.2:14655005-14655024 | MS.gene40400:intron | 60.0% |
| !! | GCTGCTGAGGATGGTGATGG+TGG | - | chr7.2:14655014-14655033 | MS.gene40400:intron | 60.0% |
| !! | GGAAGCGCTGGATGAAGCAG+CGG | + | chr7.2:14654718-14654737 | None:intergenic | 60.0% |
| !! | GGTGCTGCTGAGGATGGTGA+TGG | - | chr7.2:14655011-14655030 | MS.gene40400:intron | 60.0% |
| !! | GTTGCGTGAGATGGCGGAGA+CGG | - | chr7.2:14655190-14655209 | MS.gene40400:intron | 60.0% |
| ACTGGCGAACATCTGGGGGC+AGG | - | chr7.2:14657386-14657405 | MS.gene40400:intron | 65.0% | |
| CTGGCGAACATCTGGGGGCA+GGG | - | chr7.2:14657387-14657406 | MS.gene40400:intron | 65.0% | |
| TGGCGAACATCTGGGGGCAG+GGG | - | chr7.2:14657388-14657407 | MS.gene40400:intron | 65.0% | |
| ! | AGCGCTGGATGAAGCAGCGG+CGG | + | chr7.2:14654715-14654734 | None:intergenic | 65.0% |
| ! | GCAGTGTCGGGTAACGCCGT+TGG | + | chr7.2:14658388-14658407 | None:intergenic | 65.0% |
| ! | TACGGTGGAGACGGTGTCGG+AGG | + | chr7.2:14654655-14654674 | None:intergenic | 65.0% |
| !! | GCCGCCGGTTTCTTCGGCTA+GGG | + | chr7.2:14654526-14654545 | None:intergenic | 65.0% |
| !! | TGCCGCCGGTTTCTTCGGCT+AGG | + | chr7.2:14654527-14654546 | None:intergenic | 65.0% |
| AGCAGCGGCGGAGGTGACAG+AGG | + | chr7.2:14654703-14654722 | None:intergenic | 70.0% | |
| AGCGGCGGAGGTGACAGAGG+AGG | + | chr7.2:14654700-14654719 | None:intergenic | 70.0% | |
| GCTGGATGAAGCAGCGGCGG+AGG | + | chr7.2:14654712-14654731 | None:intergenic | 70.0% | |
| GGCGGAGACGGAGAAGCGGA+CGG | - | chr7.2:14655202-14655221 | MS.gene40400:intron | 70.0% | |
| ! | GGTGGAGACGGTGTCGGAGG+TGG | + | chr7.2:14654652-14654671 | None:intergenic | 70.0% |
| ! | TTCGTCGGGGAGGGAAGCGC+TGG | + | chr7.2:14654730-14654749 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 14654483 | 14658544 | 14654483 | ID=MS.gene40400 |
| chr7.2 | mRNA | 14654483 | 14658544 | 14654483 | ID=MS.gene40400.t1;Parent=MS.gene40400 |
| chr7.2 | exon | 14657723 | 14658544 | 14657723 | ID=MS.gene40400.t1.exon1;Parent=MS.gene40400.t1 |
| chr7.2 | CDS | 14657723 | 14658544 | 14657723 | ID=cds.MS.gene40400.t1;Parent=MS.gene40400.t1 |
| chr7.2 | exon | 14654483 | 14654896 | 14654483 | ID=MS.gene40400.t1.exon2;Parent=MS.gene40400.t1 |
| chr7.2 | CDS | 14654483 | 14654896 | 14654483 | ID=cds.MS.gene40400.t1;Parent=MS.gene40400.t1 |
| Gene Sequence |
| Protein sequence |
