AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058783


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058783.t1 MTR_1g079790 92.295 597 10 3 1 561 166 762 0.0 1109
MS.gene058783.t1 MTR_7g116330 67.002 597 157 6 1 561 173 765 0.0 802
MS.gene058783.t1 MTR_1g079790 88.318 428 14 3 1 392 166 593 0.0 754
MS.gene058783.t1 MTR_1g073840 53.846 598 227 9 1 556 166 756 0.0 625
MS.gene058783.t1 MTR_1g044210 48.915 599 255 9 1 554 165 757 0.0 548
MS.gene058783.t1 MTR_4g031150 34.975 609 327 16 1 556 191 783 8.27e-105 333
MS.gene058783.t1 MTR_7g109150 34.809 497 254 13 1 442 142 623 6.34e-61 213
MS.gene058783.t1 MTR_4g134880 56.164 73 31 1 486 557 1 73 1.54e-19 83.6
MS.gene058783.t1 MTR_8g080770 33.083 133 79 3 433 557 731 861 3.19e-15 79.7
MS.gene058783.t1 MTR_8g080770 26.415 159 117 0 175 333 262 420 2.11e-12 70.5
MS.gene058783.t1 MTR_8g080770 33.083 133 79 3 433 557 840 970 3.22e-15 79.7
MS.gene058783.t1 MTR_8g080770 26.415 159 117 0 175 333 371 529 2.11e-12 70.5
MS.gene058783.t1 MTR_3g085130 34.921 126 71 3 433 550 695 817 9.70e-14 74.7
MS.gene058783.t1 MTR_3g085130 24.528 159 120 0 175 333 216 374 2.05e-12 70.5
MS.gene058783.t1 MTR_3g085130 34.921 126 71 3 433 550 905 1027 1.50e-13 74.3
MS.gene058783.t1 MTR_3g085130 24.528 159 120 0 175 333 426 584 1.97e-12 70.9
MS.gene058783.t1 MTR_8g106150 27.673 159 115 0 175 333 119 277 1.70e-12 70.9
MS.gene058783.t1 MTR_8g106150 27.673 159 115 0 175 333 362 520 1.74e-12 70.9
MS.gene058783.t1 MTR_8g075340 33.077 130 62 3 433 541 1028 1153 5.29e-12 69.3
MS.gene058783.t1 MTR_8g075340 23.038 395 222 14 185 514 460 837 1.21e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058783.t1 AT3G04580 55.446 606 220 8 1 559 164 766 0.0 642
MS.gene058783.t1 AT3G04580 55.446 606 220 8 1 559 164 766 0.0 642
MS.gene058783.t1 AT3G23150 48.382 618 248 12 1 561 170 773 0.0 530
MS.gene058783.t1 AT3G23150 49.074 432 163 8 1 386 170 590 7.78e-124 377
MS.gene058783.t1 AT1G04310 43.982 457 209 8 1 416 173 623 1.62e-114 354
MS.gene058783.t1 AT1G04310 43.982 457 209 8 1 416 173 623 1.62e-114 354
MS.gene058783.t1 AT1G66340 36.500 600 324 12 1 554 141 729 1.08e-111 350
MS.gene058783.t1 AT2G40940 34.829 468 236 14 1 415 141 592 9.82e-64 220
MS.gene058783.t1 AT5G35750 27.673 159 114 1 176 333 567 725 2.69e-14 76.6
MS.gene058783.t1 AT5G35750 31.250 128 64 3 435 541 1036 1160 2.78e-11 67.0
MS.gene058783.t1 AT2G01830 26.415 159 117 0 175 333 451 609 2.70e-14 76.6
MS.gene058783.t1 AT2G01830 26.415 159 117 0 175 333 440 598 3.09e-14 76.6
MS.gene058783.t1 AT2G01830 26.415 159 117 0 175 333 428 586 3.13e-14 76.6
MS.gene058783.t1 AT2G01830 26.415 159 117 0 175 333 428 586 3.13e-14 76.6
MS.gene058783.t1 AT2G01830 26.415 159 117 0 175 333 428 586 3.13e-14 76.6
MS.gene058783.t1 AT2G01830 26.415 159 117 0 175 333 428 586 3.13e-14 76.6
MS.gene058783.t1 AT1G27320 25.281 178 133 0 156 333 410 587 7.52e-14 75.5
MS.gene058783.t1 AT1G27320 28.986 138 76 3 433 550 889 1024 9.99e-11 65.5

Find 139 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGTAATTATGCATATTAT+TGG 0.179884 1.4:+64550024 MS.gene058783:CDS
GGATATCTCTGAAAATAAAA+AGG 0.209690 1.4:+64549840 MS.gene058783:CDS
TGTGAATTTGAATAATCTTT+AGG 0.255453 1.4:-64551672 None:intergenic
TTCATCAGGGTTTGAGTGCC+TGG 0.258763 1.4:+64551794 MS.gene058783:CDS
GATGAAGGAGGATTGGTTTC+CGG 0.271626 1.4:-64552016 None:intergenic
GCTATGATCAAAGGCCAATT+AGG 0.272954 1.4:-64551927 None:intergenic
TGTTGAGCTTTCTAAGGCTT+TGG 0.281832 1.4:+64549131 MS.gene058783:CDS
TACTCTTGTTGAGCTTTCTA+AGG 0.286989 1.4:+64549125 MS.gene058783:CDS
TGCACCAAACCCTGAGAGTT+TGG 0.309721 1.4:-64551588 None:intergenic
TTTATGTCTACATACTCAAC+TGG 0.311908 1.4:-64550155 None:intergenic
GGAAATTCAATGGCCCTAAT+TGG 0.315301 1.4:+64551913 MS.gene058783:CDS
GGATGCTTACTAGGGAAATT+AGG 0.316546 1.4:+64549070 MS.gene058783:CDS
ATGTTATGCTATACTAGTTT+TGG 0.328451 1.4:+64549452 MS.gene058783:CDS
GATTATTCAAATTCACAGTT+TGG 0.328563 1.4:+64551678 MS.gene058783:CDS
AGGAAGCTAGTTGGCATGTT+AGG 0.342538 1.4:+64549049 None:intergenic
AGGACTGAACAAAAGATTAT+TGG 0.343143 1.4:+64549763 MS.gene058783:CDS
CAGATGATGATAGTTTAAAT+AGG 0.352906 1.4:+64551721 MS.gene058783:CDS
ACTTCAAAACCATCCATTTC+AGG 0.357064 1.4:-64551876 None:intergenic
ATTTGCATAATTGTGCTGTT+TGG 0.362682 1.4:+64549154 MS.gene058783:CDS
TTCCTTATCTCCAACACATC+AGG 0.366420 1.4:-64549273 None:intergenic
CTAGTAACAGCAGTTTCATC+AGG 0.380902 1.4:+64551780 MS.gene058783:CDS
GGCATGTTAGGATGCTTACT+AGG 0.396870 1.4:+64549061 MS.gene058783:CDS
TCATGAATTGAAATCGGATT+CGG 0.398997 1.4:+64549212 MS.gene058783:CDS
TTTGACTCATGAATTGAAAT+CGG 0.399140 1.4:+64549206 MS.gene058783:CDS
GAATCACAACAGTGAATCTA+AGG 0.402957 1.4:+64550254 MS.gene058783:CDS
GTCCATGGCTCATCACTGTT+TGG 0.409431 1.4:-64549681 None:intergenic
CCCTCAACATGGAATGTAGA+AGG 0.409888 1.4:-64549891 None:intergenic
CATGAATTGAAATCGGATTC+GGG 0.409935 1.4:+64549213 MS.gene058783:CDS
AGATAATGCAAGGTAATATA+TGG 0.410537 1.4:+64551559 MS.gene058783:intron
AGTTGAGGTGGTGGCTGATC+AGG 0.412583 1.4:+64549525 MS.gene058783:CDS
TTGAAGTGGCGGCAAGGATC+AGG 0.415267 1.4:+64551892 MS.gene058783:CDS
ATTACCAAACTCTCAGGGTT+TGG 0.429450 1.4:+64551584 MS.gene058783:CDS
ATGGATATTACCAAACTCTC+AGG 0.429769 1.4:+64551578 MS.gene058783:CDS
CCTTCTACATTCCATGTTGA+GGG 0.431332 1.4:+64549891 MS.gene058783:CDS
ATCTCTCTCCTATCATCATT+CGG 0.433427 1.4:-64549180 None:intergenic
TTGTGTGTGTATCAAGGGTT+TGG 0.438334 1.4:+64549937 MS.gene058783:CDS
GCAACTCCTAGTTTAGATTC+AGG 0.441706 1.4:-64549321 None:intergenic
TTTGAGACTGTTGCAATGCT+CGG 0.443821 1.4:-64549621 None:intergenic
TAAGGAAAACTAAAGGGGTT+AGG 0.448583 1.4:+64549289 MS.gene058783:CDS
CTATGATCAAAGGCCAATTA+GGG 0.451338 1.4:-64551926 None:intergenic
CTGGGTGCTATAAGTGGCTC+TGG 0.456114 1.4:+64551813 MS.gene058783:CDS
CTTCTTCTAAAGTTTCAGAT+AGG 0.459490 1.4:+64551621 MS.gene058783:CDS
GAACGCGATGATGGCCAGCC+AGG 0.462578 1.4:+64549645 MS.gene058783:CDS
TGGAGATAAGGAAAACTAAA+GGG 0.470604 1.4:+64549283 MS.gene058783:CDS
TAATGCAGAAGAGCAAGTTA+AGG 0.472874 1.4:+64551959 MS.gene058783:CDS
AGACATTCACATGCCTGAAA+TGG 0.474093 1.4:+64551863 MS.gene058783:CDS
TCCTTCTACATTCCATGTTG+AGG 0.474448 1.4:+64549890 MS.gene058783:CDS
GTTGCGAGTAGTGGCGGTGG+GGG 0.474504 1.4:+64549339 MS.gene058783:CDS
GGAGTTGCGAGTAGTGGCGG+TGG 0.474808 1.4:+64549336 MS.gene058783:CDS
CAAAGGAGGGACGCCGGAGT+TGG 0.475152 1.4:+64549422 MS.gene058783:CDS
CTTCATGTTTCGAATTTCAA+AGG 0.475335 1.4:+64549405 MS.gene058783:CDS
AAAGAAGCTACTCGAGAGGC+TGG 0.477400 1.4:+64551752 MS.gene058783:CDS
GAGTTGCGAGTAGTGGCGGT+GGG 0.478888 1.4:+64549337 MS.gene058783:CDS
CGAGAACCGACGCGTGAGAA+AGG 0.484376 1.4:-64549558 None:intergenic
ACCCTGATGTGTTGGAGATA+AGG 0.484829 1.4:+64549271 MS.gene058783:CDS
GAATGACTTCCTAGCCTGGC+TGG 0.485805 1.4:-64549659 None:intergenic
TCATCAGGGTTTGAGTGCCT+GGG 0.491049 1.4:+64551795 MS.gene058783:CDS
AAGTGCTTGTGTGTGTATCA+AGG 0.498129 1.4:+64549931 MS.gene058783:CDS
TTTGGAATGACTTCCTAGCC+TGG 0.501343 1.4:-64549663 None:intergenic
TTTGGATGCCGAATGATGAT+AGG 0.501945 1.4:+64549172 MS.gene058783:CDS
TTGGAGATAAGGAAAACTAA+AGG 0.504670 1.4:+64549282 MS.gene058783:CDS
TTGAGGCCTGAATCTAAACT+AGG 0.504811 1.4:+64549315 MS.gene058783:CDS
AGGCCAATGCATTCAGTTGT+GGG 0.505607 1.4:+64549709 MS.gene058783:CDS
CGATGATGGCCAGCCAGGCT+AGG 0.509807 1.4:+64549650 MS.gene058783:CDS
GAGTTTAGTAAACGATGTAA+TGG 0.515957 1.4:+64549819 MS.gene058783:CDS
AACTCTCAGGGTTTGGTGCA+AGG 0.516591 1.4:+64551591 MS.gene058783:CDS
GAGTGCCTGGGTGCTATAAG+TGG 0.519942 1.4:+64551807 MS.gene058783:CDS
GCATTGGCCTCCTCAGTCCA+TGG 0.520880 1.4:-64549696 None:intergenic
AAGGATAGATGCATGCTGGC+TGG 0.523016 1.4:+64551978 MS.gene058783:CDS
GTCTCAAAAGAACGCGATGA+TGG 0.526187 1.4:+64549636 MS.gene058783:CDS
GAGAACCGACGCGTGAGAAA+GGG 0.532015 1.4:-64549557 None:intergenic
TGTTGAACACGCGTGACCGA+GGG 0.532022 1.4:+64550052 MS.gene058783:CDS
GCTATCTGATGAAGGAGGAT+TGG 0.533500 1.4:-64552023 None:intergenic
TGTGATTGACCCTGATGTGT+TGG 0.534459 1.4:+64549263 MS.gene058783:CDS
TATGTGCCGGAGGTTGGTAC+AGG 0.536453 1.4:+64550293 MS.gene058783:CDS
GCAAGGATCAGGAAATTCAA+TGG 0.537123 1.4:+64551903 MS.gene058783:CDS
CTTCAATATGTGCCGGAGGT+TGG 0.538586 1.4:+64550287 MS.gene058783:CDS
GCTATAAGAGCTATGATCAA+AGG 0.539373 1.4:-64551936 None:intergenic
GAGGCCAATGCATTCAGTTG+TGG 0.544582 1.4:+64549708 MS.gene058783:CDS
TTGTTGAACACGCGTGACCG+AGG 0.544947 1.4:+64550051 MS.gene058783:CDS
TGTTTCAAGAGGGTAATATG+AGG 0.554581 1.4:+64549743 MS.gene058783:CDS
AACATGTATCTTTCAAGCGA+TGG 0.555713 1.4:-64551645 None:intergenic
TGCATGCTGGCTGGAATGAA+TGG 0.556631 1.4:+64551987 MS.gene058783:CDS
GTTCATCCGCTATCTGATGA+AGG 0.557017 1.4:-64552031 None:intergenic
AGTGCTTGTGTGTGTATCAA+GGG 0.557402 1.4:+64549932 MS.gene058783:CDS
CTGGAATGAATGGTGTGATC+CGG 0.559043 1.4:+64551997 MS.gene058783:CDS
AGTTGCGAGTAGTGGCGGTG+GGG 0.561735 1.4:+64549338 MS.gene058783:CDS
ATGTTTCGAATTTCAAAGGA+GGG 0.563184 1.4:+64549409 MS.gene058783:CDS
GAATTTCAAAGGAGGGACGC+CGG 0.563898 1.4:+64549416 MS.gene058783:CDS
CACCTACCTGTACCAACCTC+CGG 0.564583 1.4:-64550299 None:intergenic
AACACATCAGGGTCAATCAC+AGG 0.564986 1.4:-64549261 None:intergenic
AACATGGAATGTAGAAGGAA+AGG 0.568366 1.4:-64549886 None:intergenic
CGTAGCCCTTTCTCACGCGT+CGG 0.568817 1.4:+64549552 MS.gene058783:CDS
AAATTCGAAACATGAAGCAT+CGG 0.568829 1.4:-64549399 None:intergenic
TATTCAAATTCACAGTTTGG+AGG 0.570060 1.4:+64551681 MS.gene058783:CDS
ATCCCCACAACTGAATGCAT+TGG 0.570182 1.4:-64549712 None:intergenic
CATGTTTCGAATTTCAAAGG+AGG 0.571827 1.4:+64549408 MS.gene058783:CDS
GCATGTTAGGATGCTTACTA+GGG 0.572208 1.4:+64549062 MS.gene058783:CDS
AGATCGGTCCTACTTCGTGC+AGG 0.573170 1.4:+64552056 MS.gene058783:CDS
AGAAACAAAAGGAAGCTAGT+TGG 0.575842 1.4:+64549040 None:intergenic
ATTCACATGCCTGAAATGGA+TGG 0.579300 1.4:+64551867 MS.gene058783:CDS
TTCCAAACAGTGATGAGCCA+TGG 0.580133 1.4:+64549679 MS.gene058783:CDS
GCTTGAGCTTCAATATGTGC+CGG 0.584592 1.4:+64550280 MS.gene058783:CDS
TCCTTATCTCCAACACATCA+GGG 0.586059 1.4:-64549272 None:intergenic
TGAGGAGTTGGGTGCTGTCG+CGG 0.592472 1.4:+64549365 MS.gene058783:CDS
AGTTAAGGATAGATGCATGC+TGG 0.598062 1.4:+64551974 MS.gene058783:CDS
AAGGTTTCATCTCTAACTGA+AGG 0.599231 1.4:-64549867 None:intergenic
TGGATATTACCAAACTCTCA+GGG 0.599355 1.4:+64551579 MS.gene058783:CDS
GGAGATAAGGAAAACTAAAG+GGG 0.605752 1.4:+64549284 MS.gene058783:CDS
ATGCTTTCATTGTTTCAAGA+GGG 0.605913 1.4:+64549733 MS.gene058783:CDS
AAACTAGGAGTTGCGAGTAG+TGG 0.606504 1.4:+64549330 MS.gene058783:CDS
CTAGGAGTTGCGAGTAGTGG+CGG 0.609987 1.4:+64549333 MS.gene058783:CDS
AAGAAGCTACTCGAGAGGCT+GGG 0.610653 1.4:+64551753 MS.gene058783:CDS
GGTGCTATAAGTGGCTCTGG+TGG 0.610827 1.4:+64551816 MS.gene058783:CDS
TAGTAACAGCAGTTTCATCA+GGG 0.611000 1.4:+64551781 MS.gene058783:CDS
AATCTTATGCAGATAATGCA+AGG 0.616623 1.4:+64551549 MS.gene058783:intron
GATGCTTTCATTGTTTCAAG+AGG 0.621734 1.4:+64549732 MS.gene058783:CDS
TCCAGAGATGGAGATAGTTG+AGG 0.622210 1.4:+64549510 MS.gene058783:intron
GATGGAGATAGTTGAGGTGG+TGG 0.622877 1.4:+64549516 MS.gene058783:CDS
TCACAACAGTGAATCTAAGG+AGG 0.625084 1.4:+64550257 MS.gene058783:CDS
GATAGCGGATGAACTTAGAT+CGG 0.629033 1.4:+64552040 MS.gene058783:CDS
GCAAGCGGCTTCCCTCAACA+TGG 0.629945 1.4:-64549902 None:intergenic
CAAGCACTTAGCAATGCAAG+CGG 0.631343 1.4:-64549917 None:intergenic
GGTGACACAATGTTGAAAGT+CGG 0.632956 1.4:+64549784 MS.gene058783:CDS
TAACATGTATCAACCAACTC+CGG 0.640709 1.4:-64549435 None:intergenic
CACAACAGTGAATCTAAGGA+GGG 0.640846 1.4:+64550258 MS.gene058783:CDS
GGCCAATGCATTCAGTTGTG+GGG 0.642247 1.4:+64549710 MS.gene058783:CDS
TGAGCTTCAATATGTGCCGG+AGG 0.643404 1.4:+64550283 MS.gene058783:CDS
AGAGATGGAGATAGTTGAGG+TGG 0.648766 1.4:+64549513 MS.gene058783:intron
TTATGTCTACATACTCAACT+GGG 0.652246 1.4:-64550154 None:intergenic
CAGTGATGAGCCATGGACTG+AGG 0.655532 1.4:+64549686 MS.gene058783:CDS
TGAGGTGGTGGCTGATCAGG+TGG 0.658305 1.4:+64549528 MS.gene058783:CDS
CATCTGCTAGCAAAATCTTG+AGG 0.670396 1.4:-64551704 None:intergenic
TGATGAGCCATGGACTGAGG+AGG 0.672113 1.4:+64549689 MS.gene058783:CDS
CAGAGCCACTTATAGCACCC+AGG 0.678501 1.4:-64551812 None:intergenic
CATCCGCTATCTGATGAAGG+AGG 0.680590 1.4:-64552028 None:intergenic
CGACGCGTGAGAAAGGGCTA+CGG 0.681594 1.4:-64549551 None:intergenic
AATCCTCCTTCATCAGATAG+CGG 0.688493 1.4:+64552025 MS.gene058783:CDS
TGACAAAGAAGCTACTCGAG+AGG 0.707649 1.4:+64551748 MS.gene058783:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAATAATTACACA+GGG - chr1.4:64551484-64551503 None:intergenic 10.0%
!! TGTAATTATTTAATTAATCA+TGG + chr1.4:64551486-64551505 MS.gene058783:intron 10.0%
!! ATTATAAGTATAAAGAAGTA+AGG - chr1.4:64551349-64551368 None:intergenic 15.0%
!! GATTAATTAAATAATTACAC+AGG - chr1.4:64551485-64551504 None:intergenic 15.0%
!! TAGTGCTTTAATAAAATAAT+TGG - chr1.4:64551377-64551396 None:intergenic 15.0%
!! CAAGTAATTATGCATATTAT+TGG + chr1.4:64550024-64550043 MS.gene058783:CDS 20.0%
!! TGTGAATTTGAATAATCTTT+AGG - chr1.4:64551675-64551694 None:intergenic 20.0%
!! TTTCTTATGTTGAAAGATTT+AGG - chr1.4:64550869-64550888 None:intergenic 20.0%
!!! AAATTTGATTTTCAGATTAC+TGG + chr1.4:64550176-64550195 MS.gene058783:CDS 20.0%
!!! CTTTTATCTTAATAGTATCA+CGG + chr1.4:64550925-64550944 MS.gene058783:intron 20.0%
!!! GATATCTCTGAAAATAAAAA+GGG + chr1.4:64549841-64549860 MS.gene058783:CDS 20.0%
!!! TAATTTTACATCCTTATGAA+TGG - chr1.4:64550538-64550557 None:intergenic 20.0%
!!! TAATTTTGTTTTCCTCTTTT+AGG + chr1.4:64551015-64551034 MS.gene058783:intron 20.0%
! AATGCTTAAAGAATGATGTT+TGG + chr1.4:64550413-64550432 MS.gene058783:intron 25.0%
! AGATAATGCAAGGTAATATA+TGG + chr1.4:64551559-64551578 MS.gene058783:intron 25.0%
! ATGACAAAAAAATTGGTGTA+TGG + chr1.4:64550120-64550139 MS.gene058783:CDS 25.0%
! CACTGTCTATATTATATATG+TGG + chr1.4:64550325-64550344 MS.gene058783:intron 25.0%
! CAGATGATGATAGTTTAAAT+AGG + chr1.4:64551721-64551740 MS.gene058783:CDS 25.0%
! CGTGATACTATTAAGATAAA+AGG - chr1.4:64550927-64550946 None:intergenic 25.0%
! GATAAGGATGACAAAAAAAT+TGG + chr1.4:64550113-64550132 MS.gene058783:intron 25.0%
! GATTATTCAAATTCACAGTT+TGG + chr1.4:64551678-64551697 MS.gene058783:CDS 25.0%
! TTTGACTCATGAATTGAAAT+CGG + chr1.4:64549206-64549225 MS.gene058783:CDS 25.0%
!! AAAGATTTAGGTTATAACAG+AGG - chr1.4:64550857-64550876 None:intergenic 25.0%
!! GGATATCTCTGAAAATAAAA+AGG + chr1.4:64549840-64549859 MS.gene058783:CDS 25.0%
!! TTCTGACTTTATTTACATTG+TGG + chr1.4:64551526-64551545 MS.gene058783:intron 25.0%
!!! ATGTTATGCTATACTAGTTT+TGG + chr1.4:64549452-64549471 MS.gene058783:CDS 25.0%
!!! TTTTGTAGTCTTGTTCATAT+TGG - chr1.4:64551182-64551201 None:intergenic 25.0%
AAATTCGAAACATGAAGCAT+CGG - chr1.4:64549402-64549421 None:intergenic 30.0%
AATCTTATGCAGATAATGCA+AGG + chr1.4:64551549-64551568 MS.gene058783:intron 30.0%
ACCTATTTCCATTGATGAAA+AGG - chr1.4:64551215-64551234 None:intergenic 30.0%
AGACATAACATAGACAATCA+AGG - chr1.4:64550361-64550380 None:intergenic 30.0%
AGGACTGAACAAAAGATTAT+TGG + chr1.4:64549763-64549782 MS.gene058783:CDS 30.0%
ATGCTTTCATTGTTTCAAGA+GGG + chr1.4:64549733-64549752 MS.gene058783:CDS 30.0%
ATGTTTCGAATTTCAAAGGA+GGG + chr1.4:64549409-64549428 MS.gene058783:CDS 30.0%
ATTTCAACGAAACAACAGAT+TGG + chr1.4:64550222-64550241 MS.gene058783:intron 30.0%
CTTCATGTTTCGAATTTCAA+AGG + chr1.4:64549405-64549424 MS.gene058783:CDS 30.0%
GAGTTTAGTAAACGATGTAA+TGG + chr1.4:64549819-64549838 MS.gene058783:CDS 30.0%
GTTTCTTCAAACCATTCATA+AGG + chr1.4:64550524-64550543 MS.gene058783:intron 30.0%
TATTCAAATTCACAGTTTGG+AGG + chr1.4:64551681-64551700 MS.gene058783:CDS 30.0%
TCATGAATTGAAATCGGATT+CGG + chr1.4:64549212-64549231 MS.gene058783:CDS 30.0%
TGGAGATAAGGAAAACTAAA+GGG + chr1.4:64549283-64549302 MS.gene058783:CDS 30.0%
TTATGTCTACATACTCAACT+GGG - chr1.4:64550157-64550176 None:intergenic 30.0%
TTGGAGATAAGGAAAACTAA+AGG + chr1.4:64549282-64549301 MS.gene058783:CDS 30.0%
TTGTGTGATGTAAACTCAAA+AGG - chr1.4:64550982-64551001 None:intergenic 30.0%
TTTATGTCTACATACTCAAC+TGG - chr1.4:64550158-64550177 None:intergenic 30.0%
! AAGAAACTGATTCTACGAAT+CGG + chr1.4:64550695-64550714 MS.gene058783:intron 30.0%
! AATAAGAAAGCTTGTGCTTT+TGG + chr1.4:64551239-64551258 MS.gene058783:intron 30.0%
! ATAAGAAAGCTTGTGCTTTT+GGG + chr1.4:64551240-64551259 MS.gene058783:intron 30.0%
! ATCTCTGAAAATAAAAAGGG+TGG + chr1.4:64549844-64549863 MS.gene058783:CDS 30.0%
! ATCTTTTGTGCCTTAAAATC+TGG + chr1.4:64551313-64551332 MS.gene058783:intron 30.0%
! ATTTGCATAATTGTGCTGTT+TGG + chr1.4:64549154-64549173 MS.gene058783:CDS 30.0%
! GAATAACAAGTTCTGATTTG+TGG - chr1.4:64551422-64551441 None:intergenic 30.0%
! GTGTCTTTTCTTGAATTGTA+AGG + chr1.4:64551134-64551153 MS.gene058783:intron 30.0%
! TCCTACTTTACCAGATTTTA+AGG - chr1.4:64551326-64551345 None:intergenic 30.0%
! TCCTTTTCATCAATGGAAAT+AGG + chr1.4:64551211-64551230 MS.gene058783:intron 30.0%
! TCTTTGCCTGAAAAAGTTTT+AGG + chr1.4:64549982-64550001 MS.gene058783:CDS 30.0%
!! ATCTGTTGTTTCGTTGAAAT+CGG - chr1.4:64550222-64550241 None:intergenic 30.0%
!! CTTCTTCTAAAGTTTCAGAT+AGG + chr1.4:64551621-64551640 MS.gene058783:CDS 30.0%
AAAAAAGAGTCTCGACACAA+CGG - chr1.4:64550757-64550776 None:intergenic 35.0%
AACATGGAATGTAGAAGGAA+AGG - chr1.4:64549889-64549908 None:intergenic 35.0%
AACATGTATCTTTCAAGCGA+TGG - chr1.4:64551648-64551667 None:intergenic 35.0%
AAGGTTTCATCTCTAACTGA+AGG - chr1.4:64549870-64549889 None:intergenic 35.0%
AATCAGTTTCTTGCAATTGC+AGG - chr1.4:64550687-64550706 None:intergenic 35.0%
ACTTCAAAACCATCCATTTC+AGG - chr1.4:64551879-64551898 None:intergenic 35.0%
ATCAGTTTCTTGCAATTGCA+GGG - chr1.4:64550686-64550705 None:intergenic 35.0%
ATCTCTCTCCTATCATCATT+CGG - chr1.4:64549183-64549202 None:intergenic 35.0%
ATGGATATTACCAAACTCTC+AGG + chr1.4:64551578-64551597 MS.gene058783:CDS 35.0%
CATGAATTGAAATCGGATTC+GGG + chr1.4:64549213-64549232 MS.gene058783:CDS 35.0%
CATGTTTCGAATTTCAAAGG+AGG + chr1.4:64549408-64549427 MS.gene058783:CDS 35.0%
CTATGATCAAAGGCCAATTA+GGG - chr1.4:64551929-64551948 None:intergenic 35.0%
GAATCACAACAGTGAATCTA+AGG + chr1.4:64550254-64550273 MS.gene058783:CDS 35.0%
GATGCTTTCATTGTTTCAAG+AGG + chr1.4:64549732-64549751 MS.gene058783:CDS 35.0%
GCAATAACTGATCTCATATG+AGG + chr1.4:64550613-64550632 MS.gene058783:intron 35.0%
GCCTTAAAATCTGGTAAAGT+AGG + chr1.4:64551322-64551341 MS.gene058783:intron 35.0%
GCTATAAGAGCTATGATCAA+AGG - chr1.4:64551939-64551958 None:intergenic 35.0%
GCTCTTAGCTGAAATTAGTA+TGG - chr1.4:64550824-64550843 None:intergenic 35.0%
GGAGATAAGGAAAACTAAAG+GGG + chr1.4:64549284-64549303 MS.gene058783:CDS 35.0%
TAACATGTATCAACCAACTC+CGG - chr1.4:64549438-64549457 None:intergenic 35.0%
TAAGGAAAACTAAAGGGGTT+AGG + chr1.4:64549289-64549308 MS.gene058783:CDS 35.0%
TAATGCAGAAGAGCAAGTTA+AGG + chr1.4:64551959-64551978 MS.gene058783:CDS 35.0%
TACTCTTGTTGAGCTTTCTA+AGG + chr1.4:64549125-64549144 MS.gene058783:CDS 35.0%
TAGTAACAGCAGTTTCATCA+GGG + chr1.4:64551781-64551800 MS.gene058783:CDS 35.0%
TGGATATTACCAAACTCTCA+GGG + chr1.4:64551579-64551598 MS.gene058783:CDS 35.0%
TGTTTCAAGAGGGTAATATG+AGG + chr1.4:64549743-64549762 MS.gene058783:CDS 35.0%
! GATTTAGGTTATAACAGAGG+AGG - chr1.4:64550854-64550873 None:intergenic 35.0%
! TAAGAAAGCTTGTGCTTTTG+GGG + chr1.4:64551241-64551260 MS.gene058783:intron 35.0%
! TCGGTTTTTGTTACAAGTGA+GGG + chr1.4:64550086-64550105 MS.gene058783:intron 35.0%
! TCTCACTTCCTTTTCATCAA+TGG + chr1.4:64551204-64551223 MS.gene058783:intron 35.0%
! TTCGGTTTTTGTTACAAGTG+AGG + chr1.4:64550085-64550104 MS.gene058783:intron 35.0%
!! TCATCGCCTAAAACTTTTTC+AGG - chr1.4:64549991-64550010 None:intergenic 35.0%
!!! ATACTAGTTTTGGTTCTTCC+AGG + chr1.4:64549462-64549481 MS.gene058783:CDS 35.0%
!!! TGAAATGGATGGTTTTGAAG+TGG + chr1.4:64551878-64551897 MS.gene058783:CDS 35.0%
AAAAGGATCCTTCCAACATG+GGG - chr1.4:64550965-64550984 None:intergenic 40.0%
AAAGCAGATTCTGACATGAC+AGG + chr1.4:64551059-64551078 MS.gene058783:intron 40.0%
AAGTGCTTGTGTGTGTATCA+AGG + chr1.4:64549931-64549950 MS.gene058783:CDS 40.0%
AATCCTCCTTCATCAGATAG+CGG + chr1.4:64552025-64552044 MS.gene058783:CDS 40.0%
ACACAGAAACTGCATGATTG+TGG + chr1.4:64551112-64551131 MS.gene058783:intron 40.0%
ACCAATAACTGATCTGTTGC+AGG + chr1.4:64550652-64550671 MS.gene058783:intron 40.0%
ACCGAAAAACAAGATTCCCT+CGG - chr1.4:64550071-64550090 None:intergenic 40.0%
AGACATTCACATGCCTGAAA+TGG + chr1.4:64551863-64551882 MS.gene058783:CDS 40.0%
AGTGCTTGTGTGTGTATCAA+GGG + chr1.4:64549932-64549951 MS.gene058783:CDS 40.0%
AGTTAAGGATAGATGCATGC+TGG + chr1.4:64551974-64551993 MS.gene058783:CDS 40.0%
ATTACCAAACTCTCAGGGTT+TGG + chr1.4:64551584-64551603 MS.gene058783:CDS 40.0%
ATTCACATGCCTGAAATGGA+TGG + chr1.4:64551867-64551886 MS.gene058783:CDS 40.0%
CAAAAGGATCCTTCCAACAT+GGG - chr1.4:64550966-64550985 None:intergenic 40.0%
CAACGAAACAACAGATTGGT+AGG + chr1.4:64550226-64550245 MS.gene058783:intron 40.0%
CACAACAGTGAATCTAAGGA+GGG + chr1.4:64550258-64550277 MS.gene058783:CDS 40.0%
CATCTGCTAGCAAAATCTTG+AGG - chr1.4:64551707-64551726 None:intergenic 40.0%
CCTTCTACATTCCATGTTGA+GGG + chr1.4:64549891-64549910 MS.gene058783:CDS 40.0%
CTAGTAACAGCAGTTTCATC+AGG + chr1.4:64551780-64551799 MS.gene058783:CDS 40.0%
GCAACAGATCAGTTATTGGT+CGG - chr1.4:64550652-64550671 None:intergenic 40.0%
GCAACTCCTAGTTTAGATTC+AGG - chr1.4:64549324-64549343 None:intergenic 40.0%
GCAAGGATCAGGAAATTCAA+TGG + chr1.4:64551903-64551922 MS.gene058783:CDS 40.0%
GCATGTTAGGATGCTTACTA+GGG + chr1.4:64549062-64549081 MS.gene058783:CDS 40.0%
GCTATGATCAAAGGCCAATT+AGG - chr1.4:64551930-64551949 None:intergenic 40.0%
GGAAATTCAATGGCCCTAAT+TGG + chr1.4:64551913-64551932 MS.gene058783:CDS 40.0%
GGATGCTTACTAGGGAAATT+AGG + chr1.4:64549070-64549089 MS.gene058783:CDS 40.0%
GGCATCATTAGAGAAACATG+AGG + chr1.4:64551080-64551099 MS.gene058783:intron 40.0%
GGTGACACAATGTTGAAAGT+CGG + chr1.4:64549784-64549803 MS.gene058783:CDS 40.0%
GTTGACCTGCATCTTCATTT+GGG + chr1.4:64550451-64550470 MS.gene058783:intron 40.0%
TCAAAAGGATCCTTCCAACA+TGG - chr1.4:64550967-64550986 None:intergenic 40.0%
TCACAACAGTGAATCTAAGG+AGG + chr1.4:64550257-64550276 MS.gene058783:CDS 40.0%
TCCTTATCTCCAACACATCA+GGG - chr1.4:64549275-64549294 None:intergenic 40.0%
TCCTTCTACATTCCATGTTG+AGG + chr1.4:64549890-64549909 MS.gene058783:CDS 40.0%
TGTTGACCTGCATCTTCATT+TGG + chr1.4:64550450-64550469 MS.gene058783:intron 40.0%
TTCCTTATCTCCAACACATC+AGG - chr1.4:64549276-64549295 None:intergenic 40.0%
TTGAGGCCTGAATCTAAACT+AGG + chr1.4:64549315-64549334 MS.gene058783:CDS 40.0%
TTGATCCCAAATGAAGATGC+AGG - chr1.4:64550459-64550478 None:intergenic 40.0%
TTGTGTGTGTATCAAGGGTT+TGG + chr1.4:64549937-64549956 MS.gene058783:CDS 40.0%
TTTGGATGCCGAATGATGAT+AGG + chr1.4:64549172-64549191 MS.gene058783:CDS 40.0%
! CTAAAGGGGTTAGGATTTTG+AGG + chr1.4:64549298-64549317 MS.gene058783:CDS 40.0%
! GTTTTTGTTACAAGTGAGGG+TGG + chr1.4:64550089-64550108 MS.gene058783:intron 40.0%
! TATTTTTCCCCCATGTTGGA+AGG + chr1.4:64550954-64550973 MS.gene058783:intron 40.0%
! TTTGAGACTGTTGCAATGCT+CGG - chr1.4:64549624-64549643 None:intergenic 40.0%
!! CTTGTTATTCCCTTGCCTAT+TGG + chr1.4:64551432-64551451 MS.gene058783:intron 40.0%
!! GATAGCGGATGAACTTAGAT+CGG + chr1.4:64552040-64552059 MS.gene058783:CDS 40.0%
!! TGTTGAGCTTTCTAAGGCTT+TGG + chr1.4:64549131-64549150 MS.gene058783:CDS 40.0%
!!! AAGCTATTTTTCCCCCATGT+TGG + chr1.4:64550950-64550969 MS.gene058783:intron 40.0%
!!! AAGTTTTAGGCGATGAAGCA+AGG + chr1.4:64549995-64550014 MS.gene058783:CDS 40.0%
!!! AATGGATGGTTTTGAAGTGG+CGG + chr1.4:64551881-64551900 MS.gene058783:CDS 40.0%
!!! ACCGAGGGAATCTTGTTTTT+CGG + chr1.4:64550067-64550086 MS.gene058783:intron 40.0%
!!! AGTTTTGGTTCTTCCAGGTT+CGG + chr1.4:64549467-64549486 MS.gene058783:intron 40.0%
AAACTAGGAGTTGCGAGTAG+TGG + chr1.4:64549330-64549349 MS.gene058783:CDS 45.0%
AAAGGATCCTTCCAACATGG+GGG - chr1.4:64550964-64550983 None:intergenic 45.0%
AACACATCAGGGTCAATCAC+AGG - chr1.4:64549264-64549283 None:intergenic 45.0%
ACCCTGATGTGTTGGAGATA+AGG + chr1.4:64549271-64549290 MS.gene058783:CDS 45.0%
ACCTCAACTATCTCCATCTC+TGG - chr1.4:64549514-64549533 None:intergenic 45.0%
AGAGATGGAGATAGTTGAGG+TGG + chr1.4:64549513-64549532 MS.gene058783:intron 45.0%
AGGCCAATGCATTCAGTTGT+GGG + chr1.4:64549709-64549728 MS.gene058783:CDS 45.0%
ATCCCCACAACTGAATGCAT+TGG - chr1.4:64549715-64549734 None:intergenic 45.0%
CAAGCACTTAGCAATGCAAG+CGG - chr1.4:64549920-64549939 None:intergenic 45.0%
CCAGGATATGCTCCTAAAAG+AGG - chr1.4:64551030-64551049 None:intergenic 45.0%
CCCTCAACATGGAATGTAGA+AGG - chr1.4:64549894-64549913 None:intergenic 45.0%
CGAAACAACAGATTGGTAGG+AGG + chr1.4:64550229-64550248 MS.gene058783:intron 45.0%
CTCATATGAGGTGCATGTGA+GGG + chr1.4:64550625-64550644 MS.gene058783:intron 45.0%
CTGGAATGAATGGTGTGATC+CGG + chr1.4:64551997-64552016 MS.gene058783:CDS 45.0%
GCCTGCAACAGATCAGTTAT+TGG - chr1.4:64550656-64550675 None:intergenic 45.0%
GCTATCTGATGAAGGAGGAT+TGG - chr1.4:64552026-64552045 None:intergenic 45.0%
GCTTGAGCTTCAATATGTGC+CGG + chr1.4:64550280-64550299 MS.gene058783:CDS 45.0%
GGCATGTTAGGATGCTTACT+AGG + chr1.4:64549061-64549080 MS.gene058783:CDS 45.0%
GTCTCAAAAGAACGCGATGA+TGG + chr1.4:64549636-64549655 MS.gene058783:CDS 45.0%
GTTCATCCGCTATCTGATGA+AGG - chr1.4:64552034-64552053 None:intergenic 45.0%
TACAAGTGAGGGTGGTGATA+AGG + chr1.4:64550097-64550116 MS.gene058783:intron 45.0%
TCCAGAGATGGAGATAGTTG+AGG + chr1.4:64549510-64549529 MS.gene058783:intron 45.0%
TCCTTGACCTTCTAGTCAGA+TGG + chr1.4:64550719-64550738 MS.gene058783:intron 45.0%
TCTCATATGAGGTGCATGTG+AGG + chr1.4:64550624-64550643 MS.gene058783:intron 45.0%
TGACAAAGAAGCTACTCGAG+AGG + chr1.4:64551748-64551767 MS.gene058783:CDS 45.0%
TGTGATTGACCCTGATGTGT+TGG + chr1.4:64549263-64549282 MS.gene058783:CDS 45.0%
TTCCAAACAGTGATGAGCCA+TGG + chr1.4:64549679-64549698 MS.gene058783:CDS 45.0%
! GTTTTTCACCTGCACGAAGT+AGG - chr1.4:64552067-64552086 None:intergenic 45.0%
! TTTGGAATGACTTCCTAGCC+TGG - chr1.4:64549666-64549685 None:intergenic 45.0%
!! CCTCTTTTAGGAGCATATCC+TGG + chr1.4:64551027-64551046 MS.gene058783:intron 45.0%
!! GATGAAGGAGGATTGGTTTC+CGG - chr1.4:64552019-64552038 None:intergenic 45.0%
!!! AAGCTTGTGCTTTTGGGGTT+AGG + chr1.4:64551246-64551265 MS.gene058783:intron 45.0%
!!! ATCTGCTTTTTCGACTAGCC+AGG - chr1.4:64551048-64551067 None:intergenic 45.0%
!!! TTGTGCTTTTGGGGTTAGGT+GGG + chr1.4:64551250-64551269 MS.gene058783:intron 45.0%
AAAGAAGCTACTCGAGAGGC+TGG + chr1.4:64551752-64551771 MS.gene058783:CDS 50.0%
AAGAAGCTACTCGAGAGGCT+GGG + chr1.4:64551753-64551772 MS.gene058783:CDS 50.0%
AAGAGTCTCGACACAACGGT+TGG - chr1.4:64550753-64550772 None:intergenic 50.0%
AAGGATAGATGCATGCTGGC+TGG + chr1.4:64551978-64551997 MS.gene058783:CDS 50.0%
ACACAGGGCCTATTTCGTAC+AGG - chr1.4:64551469-64551488 None:intergenic 50.0%
ACTCCTGGACCAATAGGCAA+GGG - chr1.4:64551444-64551463 None:intergenic 50.0%
AGGAGTGGCCTGTACGAAAT+AGG + chr1.4:64551458-64551477 MS.gene058783:intron 50.0%
ATTCCCTTGCCTATTGGTCC+AGG + chr1.4:64551438-64551457 MS.gene058783:intron 50.0%
CATCCGCTATCTGATGAAGG+AGG - chr1.4:64552031-64552050 None:intergenic 50.0%
CTTCAATATGTGCCGGAGGT+TGG + chr1.4:64550287-64550306 MS.gene058783:CDS 50.0%
GAATTTCAAAGGAGGGACGC+CGG + chr1.4:64549416-64549435 MS.gene058783:CDS 50.0%
GAGGCCAATGCATTCAGTTG+TGG + chr1.4:64549708-64549727 MS.gene058783:CDS 50.0%
GATGGAGATAGTTGAGGTGG+TGG + chr1.4:64549516-64549535 MS.gene058783:CDS 50.0%
GCCATCTGACTAGAAGGTCA+AGG - chr1.4:64550723-64550742 None:intergenic 50.0%
GGCCAATGCATTCAGTTGTG+GGG + chr1.4:64549710-64549729 MS.gene058783:CDS 50.0%
GTCCATGGCTCATCACTGTT+TGG - chr1.4:64549684-64549703 None:intergenic 50.0%
GTGGTTGCCATCTGACTAGA+AGG - chr1.4:64550729-64550748 None:intergenic 50.0%
TATTTCGTACAGGCCACTCC+TGG - chr1.4:64551459-64551478 None:intergenic 50.0%
TCATCAGGGTTTGAGTGCCT+GGG + chr1.4:64551795-64551814 MS.gene058783:CDS 50.0%
TCTTCCAGGTTCGGACTCTA+GGG + chr1.4:64549476-64549495 MS.gene058783:intron 50.0%
TGAGCTTCAATATGTGCCGG+AGG + chr1.4:64550283-64550302 MS.gene058783:CDS 50.0%
TGCACCAAACCCTGAGAGTT+TGG - chr1.4:64551591-64551610 None:intergenic 50.0%
TTCATCAGGGTTTGAGTGCC+TGG + chr1.4:64551794-64551813 MS.gene058783:CDS 50.0%
TTCTTCCAGGTTCGGACTCT+AGG + chr1.4:64549475-64549494 MS.gene058783:intron 50.0%
! TGCATGCTGGCTGGAATGAA+TGG + chr1.4:64551987-64552006 MS.gene058783:CDS 50.0%
!! AACTCTCAGGGTTTGGTGCA+AGG + chr1.4:64551591-64551610 MS.gene058783:CDS 50.0%
!! ACTATCTCCATCTCTGGAGC+TGG - chr1.4:64549508-64549527 None:intergenic 50.0%
!!! ATGGTTTTGAAGTGGCGGCA+AGG + chr1.4:64551886-64551905 MS.gene058783:CDS 50.0%
!!! CTTGTGCTTTTGGGGTTAGG+TGG + chr1.4:64551249-64551268 MS.gene058783:intron 50.0%
AGATCGGTCCTACTTCGTGC+AGG + chr1.4:64552056-64552075 MS.gene058783:CDS 55.0%
CAAACCCTAGAGTCCGAACC+TGG - chr1.4:64549483-64549502 None:intergenic 55.0%
CACCTACCTGTACCAACCTC+CGG - chr1.4:64550302-64550321 None:intergenic 55.0%
CACTCCTGGACCAATAGGCA+AGG - chr1.4:64551445-64551464 None:intergenic 55.0%
CAGAGCCACTTATAGCACCC+AGG - chr1.4:64551815-64551834 None:intergenic 55.0%
CTAGGAGTTGCGAGTAGTGG+CGG + chr1.4:64549333-64549352 MS.gene058783:CDS 55.0%
CTTGCCTATTGGTCCAGGAG+TGG + chr1.4:64551443-64551462 MS.gene058783:intron 55.0%
GAATGACTTCCTAGCCTGGC+TGG - chr1.4:64549662-64549681 None:intergenic 55.0%
GAGAACCGACGCGTGAGAAA+GGG - chr1.4:64549560-64549579 None:intergenic 55.0%
GTTTGGACCAGCTCCAGAGA+TGG + chr1.4:64549498-64549517 MS.gene058783:intron 55.0%
TCTCGACACAACGGTTGGAG+TGG - chr1.4:64550748-64550767 None:intergenic 55.0%
TGTTGAACACGCGTGACCGA+GGG + chr1.4:64550052-64550071 MS.gene058783:CDS 55.0%
TTGAAGTGGCGGCAAGGATC+AGG + chr1.4:64551892-64551911 MS.gene058783:CDS 55.0%
TTGTTGAACACGCGTGACCG+AGG + chr1.4:64550051-64550070 MS.gene058783:CDS 55.0%
! AGTTGAGGTGGTGGCTGATC+AGG + chr1.4:64549525-64549544 MS.gene058783:CDS 55.0%
! CAGTGATGAGCCATGGACTG+AGG + chr1.4:64549686-64549705 MS.gene058783:CDS 55.0%
! CTGGGTGCTATAAGTGGCTC+TGG + chr1.4:64551813-64551832 MS.gene058783:CDS 55.0%
! GAGTGCCTGGGTGCTATAAG+TGG + chr1.4:64551807-64551826 MS.gene058783:CDS 55.0%
! TGATGAGCCATGGACTGAGG+AGG + chr1.4:64549689-64549708 MS.gene058783:CDS 55.0%
!! CAGGTTCGGACTCTAGGGTT+TGG + chr1.4:64549481-64549500 MS.gene058783:intron 55.0%
!! GGTGCTATAAGTGGCTCTGG+TGG + chr1.4:64551816-64551835 MS.gene058783:CDS 55.0%
!! TATGTGCCGGAGGTTGGTAC+AGG + chr1.4:64550293-64550312 MS.gene058783:CDS 55.0%
AGTTGCGAGTAGTGGCGGTG+GGG + chr1.4:64549338-64549357 MS.gene058783:CDS 60.0%
CAGGCCACTCCTGGACCAAT+AGG - chr1.4:64551450-64551469 None:intergenic 60.0%
CGACGCGTGAGAAAGGGCTA+CGG - chr1.4:64549554-64549573 None:intergenic 60.0%
CGAGAACCGACGCGTGAGAA+AGG - chr1.4:64549561-64549580 None:intergenic 60.0%
CGTAGCCCTTTCTCACGCGT+CGG + chr1.4:64549552-64549571 MS.gene058783:CDS 60.0%
GAGTTGCGAGTAGTGGCGGT+GGG + chr1.4:64549337-64549356 MS.gene058783:CDS 60.0%
GCAAGCGGCTTCCCTCAACA+TGG - chr1.4:64549905-64549924 None:intergenic 60.0%
! GCATTGGCCTCCTCAGTCCA+TGG - chr1.4:64549699-64549718 None:intergenic 60.0%
! TGAGGAGTTGGGTGCTGTCG+CGG + chr1.4:64549365-64549384 MS.gene058783:CDS 60.0%
! TGAGGTGGTGGCTGATCAGG+TGG + chr1.4:64549528-64549547 MS.gene058783:CDS 60.0%
!! GGTGGGGGTACTGAGGAGTT+GGG + chr1.4:64549354-64549373 MS.gene058783:CDS 60.0%
!! TGCCGGAGGTTGGTACAGGT+AGG + chr1.4:64550297-64550316 MS.gene058783:intron 60.0%
CAAAGGAGGGACGCCGGAGT+TGG + chr1.4:64549422-64549441 MS.gene058783:CDS 65.0%
GGAGTTGCGAGTAGTGGCGG+TGG + chr1.4:64549336-64549355 MS.gene058783:CDS 65.0%
GTTGCGAGTAGTGGCGGTGG+GGG + chr1.4:64549339-64549358 MS.gene058783:CDS 65.0%
! CGATGATGGCCAGCCAGGCT+AGG + chr1.4:64549650-64549669 MS.gene058783:CDS 65.0%
! GAACGCGATGATGGCCAGCC+AGG + chr1.4:64549645-64549664 MS.gene058783:CDS 65.0%
!! CGGTGGGGGTACTGAGGAGT+TGG + chr1.4:64549353-64549372 MS.gene058783:CDS 65.0%
!! TAGTGGCGGTGGGGGTACTG+AGG + chr1.4:64549347-64549366 MS.gene058783:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 64549051 64552091 64549051 ID=MS.gene058783
chr1.4 mRNA 64549051 64552091 64549051 ID=MS.gene058783.t1;Parent=MS.gene058783
chr1.4 exon 64549051 64549483 64549051 ID=MS.gene058783.t1.exon1;Parent=MS.gene058783.t1
chr1.4 CDS 64549051 64549483 64549051 ID=cds.MS.gene058783.t1;Parent=MS.gene058783.t1
chr1.4 exon 64549515 64550080 64549515 ID=MS.gene058783.t1.exon2;Parent=MS.gene058783.t1
chr1.4 CDS 64549515 64550080 64549515 ID=cds.MS.gene058783.t1;Parent=MS.gene058783.t1
chr1.4 exon 64550119 64550207 64550119 ID=MS.gene058783.t1.exon3;Parent=MS.gene058783.t1
chr1.4 CDS 64550119 64550207 64550119 ID=cds.MS.gene058783.t1;Parent=MS.gene058783.t1
chr1.4 exon 64550248 64550314 64550248 ID=MS.gene058783.t1.exon4;Parent=MS.gene058783.t1
chr1.4 CDS 64550248 64550314 64550248 ID=cds.MS.gene058783.t1;Parent=MS.gene058783.t1
chr1.4 exon 64551561 64552091 64551561 ID=MS.gene058783.t1.exon5;Parent=MS.gene058783.t1
chr1.4 CDS 64551561 64552091 64551561 ID=cds.MS.gene058783.t1;Parent=MS.gene058783.t1
Gene Sequence

>MS.gene058783

GAAGCTAGTTGGCATGTTAGGATGCTTACTAGGGAAATTAGGAAGTCTCTTGATAAACATACAATTTTGTATACTACTCTTGTTGAGCTTTCTAAGGCTTTGGATTTGCATAATTGTGCTGTTTGGATGCCGAATGATGATAGGAGAGAGATGTATTTGACTCATGAATTGAAATCGGATTCGGGTAAGAGTTTTCATCATAATTCTATTCCTGTGATTGACCCTGATGTGTTGGAGATAAGGAAAACTAAAGGGGTTAGGATTTTGAGGCCTGAATCTAAACTAGGAGTTGCGAGTAGTGGCGGTGGGGGTACTGAGGAGTTGGGTGCTGTCGCGGCTATTCGTATGCCGATGCTTCATGTTTCGAATTTCAAAGGAGGGACGCCGGAGTTGGTTGATACATGTTATGCTATACTAGTTTTGGTTCTTCCAGGTTCGGACTCTAGGGTTTGGACCAGCTCCAGAGATGGAGATAGTTGAGGTGGTGGCTGATCAGGTGGCCGTAGCCCTTTCTCACGCGTCGGTTCTCGAAGAGTCTTATTTAATGAGAGAGAAACTCGAAGAGCAAATCCGAGCATTGCAACAGTCTCAAAAGAACGCGATGATGGCCAGCCAGGCTAGGAAGTCATTCCAAACAGTGATGAGCCATGGACTGAGGAGGCCAATGCATTCAGTTGTGGGGATGCTTTCATTGTTTCAAGAGGGTAATATGAGGACTGAACAAAAGATTATTGGTGACACAATGTTGAAAGTCGGCAATGTGCTCTCGAGTTTAGTAAACGATGTAATGGATATCTCTGAAAATAAAAAGGGTGGCCTTCAGTTAGAGATGAAACCTTTCCTTCTACATTCCATGTTGAGGGAAGCCGCTTGCATTGCTAAGTGCTTGTGTGTGTATCAAGGGTTTGGTTTTCAAATTGATGTCGAAAAGTCTTTGCCTGAAAAAGTTTTAGGCGATGAAGCAAGGACTTTTCAAGTAATTATGCATATTATTGGCTATTTGTTGAACACGCGTGACCGAGGGAATCTTGTTTTTCGGTTTTTGTTACAAGTGAGGGTGGTGATAAGGATGACAAAAAAATTGGTGTATGGAGATCGAGCAGCCCAGTTGAGTATGTAGACATAAAATTTGATTTTCAGATTACTGGTAGTTCTCAGTCAGATGAAACCGATTTCAACGAAACAACAGATTGGTAGGAGGCTGAATCACAACAGTGAATCTAAGGAGGGCTTGAGCTTCAATATGTGCCGGAGGTTGGTACAGGTAGGTGCATCACTGTCTATATTATATATGTGGATCATAATCTCCTTGATTGTCTATGTTATGTCTGAGTATCAAATATGTCATTTATTGTTCAAATTAATGCTTAAAGAATGATGTTTGGTTTGACGAATTTAATGTTGACCTGCATCTTCATTTGGGATCAAAATGAATGCTAGCATGCTTGCTACTAAACTTTAGTGAAAGTTTTTGTTTCTTCAAACCATTCATAAGGATGTAAAATTATGTGTGATCACTTATCTGTTCATTCGAAGTCACTGATTACTTATATTTAAAAAGTGCAATAACTGATCTCATATGAGGTGCATGTGAGGGTCCGACCAATAACTGATCTGTTGCAGGCAATCTTACCCTGCAATTGCAAGAAACTGATTCTACGAATCGGATCCTTGACCTTCTAGTCAGATGGCAACCACTCCAACCGTTGTGTCGAGACTCTTTTTTTCACTGATAACTTATATTTGACAATTTTTCGTAGATTTCTCTCTCCATACTAATTTCAGCTAAGAGCTGACAAGCCTCCTCTGTTATAACCTAAATCTTTCAACATAAGAAATAAAATAAAAAAATTAATAAGAACATAATTGTAATCCTTTTATCTTAATAGTATCACGGAGAAGCTATTTTTCCCCCATGTTGGAAGGATCCTTTTGAGTTTACATCACACAAGCATGCATTTGCATAATTTTGTTTTCCTCTTTTAGGAGCATATCCTGGCTAGTCGAAAAAGCAGATTCTGACATGACAGGCATCATTAGAGAAACATGAGGATTGTAATAACACAGAAACTGCATGATTGTGGTGTCTTTTCTTGAATTGTAAGGTCATTCAGTTAGTTTTAGAATTCCAATATGAACAAGACTACAAAAAATCTCACTTCCTTTTCATCAATGGAAATAGGTGAACAATAAGAAAGCTTGTGCTTTTGGGGTTAGGTGGGTGCATTATTTTATTATATAGAAAAATAATAGTAAAGTAGCATCTTTTGTGCCTTAAAATCTGGTAAAGTAGGACCTTACTTCTTTATACTTATAATAGTATCCAATTATTTTATTAAAGCACTATTATGATTTCTCTCTCTTTTTGCCACAAATCAGAACTTGTTATTCCCTTGCCTATTGGTCCAGGAGTGGCCTGTACGAAATAGGCCCTGTGTAATTATTTAATTAATCATGGCATGCTTGTTTTTGTAATTCTGACTTTATTTACATTGTGGAATCTTATGCAGATAATGCAAGGTAATATATGGATATTACCAAACTCTCAGGGTTTGGTGCAAGGCGTGTCACTTCTTCTAAAGTTTCAGATAGGACCATCGCTTGAAAGATACATGTTTGCACCTAAAGATTATTCAAATTCACAGTTTGGAGGCCTCAAGATTTTGCTAGCAGATGATGATAGTTTAAATAGGATCGTGACAAAGAAGCTACTCGAGAGGCTGGGCTGTCTAGTAACAGCAGTTTCATCAGGGTTTGAGTGCCTGGGTGCTATAAGTGGCTCTGGTGGTAACTCATTCAAAATTATCATGTTAGACATTCACATGCCTGAAATGGATGGTTTTGAAGTGGCGGCAAGGATCAGGAAATTCAATGGCCCTAATTGGCCTTTGATCATAGCTCTTATAGCTAATGCAGAAGAGCAAGTTAAGGATAGATGCATGCTGGCTGGAATGAATGGTGTGATCCGGAAACCAATCCTCCTTCATCAGATAGCGGATGAACTTAGATCGGTCCTACTTCGTGCAGGTGAAAAACTGTGA

Protein sequence

>MS.gene058783.t1

EASWHVRMLTREIRKSLDKHTILYTTLVELSKALDLHNCAVWMPNDDRREMYLTHELKSDSGKSFHHNSIPVIDPDVLEIRKTKGVRILRPESKLGVASSGGGGTEELGAVAAIRMPMLHVSNFKGGTPELVDTCYAILVLVLPEMEIVEVVADQVAVALSHASVLEESYLMREKLEEQIRALQQSQKNAMMASQARKSFQTVMSHGLRRPMHSVVGMLSLFQEGNMRTEQKIIGDTMLKVGNVLSSLVNDVMDISENKKGGLQLEMKPFLLHSMLREAACIAKCLCVYQGFGFQIDVEKSLPEKVLGDEARTFQVIMHIIGYLLNTRDRGNLDDKKIGVWRSSSPVEYVDIKFDFQITGSSQRLNHNSESKEGLSFNMCRRLVQIMQGNIWILPNSQGLVQGVSLLLKFQIGPSLERYMFAPKDYSNSQFGGLKILLADDDSLNRIVTKKLLERLGCLVTAVSSGFECLGAISGSGGNSFKIIMLDIHMPEMDGFEVAARIRKFNGPNWPLIIALIANAEEQVKDRCMLAGMNGVIRKPILLHQIADELRSVLLRAGEKL