Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40415.t1 | RHN53206.1 | 86.8 | 740 | 77 | 3 | 1 | 734 | 1 | 725 | 3.10E-289 | 1004.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40415.t1 | A0A396HIY5 | 86.8 | 740 | 77 | 3 | 1 | 734 | 1 | 725 | 2.2e-289 | 1004.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052072 | MS.gene40415 | 0.811608 | 6.43E-51 | -1.69E-46 |
| MS.gene055339 | MS.gene40415 | 0.818517 | 1.88E-52 | -1.69E-46 |
| MS.gene056632 | MS.gene40415 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene40415 | 0.83742 | 5.25E-57 | -1.69E-46 |
| MS.gene061100 | MS.gene40415 | 0.803264 | 3.79E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40415.t1 | MTR_5g004630 | 90.617 | 746 | 37 | 7 | 1 | 734 | 1 | 725 | 0.0 | 1189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40415.t1 | AT5G25070 | 44.032 | 754 | 372 | 10 | 3 | 729 | 1 | 731 | 2.21e-167 | 499 |
Find 148 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCGCTGGTTGTTCAATT+TGG | 0.072315 | 5.4:-84183 | None:intergenic |
| CTTCACAAGCTTGTTCTAAT+TGG | 0.219788 | 5.4:-84840 | None:intergenic |
| AAGAAACGTTCCAGAAAATA+AGG | 0.230695 | 5.4:+84677 | MS.gene40415:CDS |
| CGGAAGACATTTCAAATTTA+CGG | 0.241495 | 5.4:+87266 | MS.gene40415:CDS |
| CTTCGACATCACCCATTTCT+TGG | 0.247970 | 5.4:-87165 | None:intergenic |
| CTCCGCTGGTTGTTCAATTT+GGG | 0.269064 | 5.4:-84182 | None:intergenic |
| TGCTGCCAGAGCTTCCTTGC+AGG | 0.286964 | 5.4:+86123 | MS.gene40415:CDS |
| ATTTAGCCTCACTAGCTATT+CGG | 0.313696 | 5.4:-86934 | None:intergenic |
| CAATGATGTTGCTTTCTTCA+TGG | 0.350218 | 5.4:-85483 | None:intergenic |
| CATGGAAGGTGGCGGAGATA+TGG | 0.351142 | 5.4:+84120 | MS.gene40415:CDS |
| CTTCTTCAGTGACAGAGTTT+CGG | 0.353431 | 5.4:-85879 | None:intergenic |
| ATCATTGCATTCAAAAGAAA+TGG | 0.355098 | 5.4:+85499 | MS.gene40415:CDS |
| AATTGATAACCTTCTCGTTC+AGG | 0.357533 | 5.4:+85907 | MS.gene40415:CDS |
| AAGCTTGAGGAAGAAATTAA+AGG | 0.359557 | 5.4:+87019 | MS.gene40415:CDS |
| GAAAATAATCCTCTGCTTGA+AGG | 0.366556 | 5.4:-86837 | None:intergenic |
| ACGGAAAGATTTGATTTCAA+TGG | 0.376880 | 5.4:+87285 | MS.gene40415:CDS |
| TGAAGGATGCTATGTCTTGC+TGG | 0.381178 | 5.4:-86820 | None:intergenic |
| CAAATCTAAAGCATCGATAA+AGG | 0.394085 | 5.4:-84959 | None:intergenic |
| GAGTGTGCTAATGGATGAAT+TGG | 0.396769 | 5.4:+85679 | MS.gene40415:CDS |
| AAAAGCAGCTGCCCAAGAAA+TGG | 0.401381 | 5.4:+87153 | MS.gene40415:CDS |
| GGTTGTTCAATTTGGGCAGC+AGG | 0.401748 | 5.4:-84175 | None:intergenic |
| AATGGAGGTGGTGGTGGTGG+TGG | 0.403163 | 5.4:-84581 | None:intergenic |
| AACAATGAGGAAAAGCTCTC+TGG | 0.403357 | 5.4:+86070 | MS.gene40415:CDS |
| TTCGACATCACCCATTTCTT+GGG | 0.407089 | 5.4:-87164 | None:intergenic |
| TAACATTGAGCTTTCAATAG+AGG | 0.407824 | 5.4:+85619 | MS.gene40415:CDS |
| AGTACTAACGACGAGGGAAT+CGG | 0.409750 | 5.4:-84512 | None:intergenic |
| AAGATAAATAATGTCGTCTC+TGG | 0.411416 | 5.4:+85779 | MS.gene40415:CDS |
| TTTAGCCTCACTAGCTATTC+GGG | 0.411756 | 5.4:-86933 | None:intergenic |
| GAAGCTGATGCAGCTGCTGC+AGG | 0.415904 | 5.4:-84244 | None:intergenic |
| TCAACCATTGAGGTGAAGTA+TGG | 0.417837 | 5.4:+85818 | MS.gene40415:CDS |
| AGGCACCCTTGATAAATTGC+AGG | 0.418273 | 5.4:+87039 | MS.gene40415:CDS |
| AAAGAATGGGAGCAAAACTT+AGG | 0.430881 | 5.4:+85933 | MS.gene40415:CDS |
| TACTATCACTAGATGGTTGT+TGG | 0.432236 | 5.4:-84540 | None:intergenic |
| AGGAGGAAGCTAAAGGATAC+AGG | 0.435555 | 5.4:+85975 | MS.gene40415:CDS |
| TAAAAGAAAGAGTGTGCTAA+TGG | 0.437544 | 5.4:+85670 | MS.gene40415:CDS |
| ATCAGCTTGTCTCAATGATT+CGG | 0.437966 | 5.4:-84935 | None:intergenic |
| ATCAATGGAGGTGGTGGTGG+TGG | 0.443017 | 5.4:-84584 | None:intergenic |
| CAGTCTCCTGCAATTTATCA+AGG | 0.444642 | 5.4:-87045 | None:intergenic |
| GTACTAACGACGAGGGAATC+GGG | 0.448073 | 5.4:-84511 | None:intergenic |
| CAAAACTTAGGGAATTTGCT+AGG | 0.448557 | 5.4:+85945 | MS.gene40415:CDS |
| ATTAACCTGCAAGGAAGCTC+TGG | 0.449548 | 5.4:-86128 | None:intergenic |
| GGATTCACTGTTTGAAGGGA+TGG | 0.449967 | 5.4:+84141 | MS.gene40415:CDS |
| CTCTGCATCTTCTGCTCGAA+AGG | 0.452472 | 5.4:+84744 | MS.gene40415:CDS |
| TGATTCTTCTCCTCCTCCGC+TGG | 0.452831 | 5.4:-84196 | None:intergenic |
| GCTGATGCAGCTGCTGCAGG+AGG | 0.453854 | 5.4:-84241 | None:intergenic |
| TCTCGTTCAGGAAGAAAGAA+TGG | 0.469047 | 5.4:+85919 | MS.gene40415:CDS |
| TCGATCAACATACAATTTCA+AGG | 0.470108 | 5.4:+87243 | MS.gene40415:CDS |
| CGAAACTCTGTCACTGAAGA+AGG | 0.470630 | 5.4:+85880 | MS.gene40415:CDS |
| TCTTGCTTCTCTTAAATACA+TGG | 0.470663 | 5.4:+84807 | MS.gene40415:CDS |
| CGGCTGTATCCATTCCCATC+TGG | 0.471467 | 5.4:-86982 | None:intergenic |
| ATGTCATCTATACTGAAGTC+CGG | 0.471801 | 5.4:+86025 | MS.gene40415:CDS |
| TCCTTCTCCTTCTCCTTCGC+CGG | 0.472966 | 5.4:+84474 | MS.gene40415:CDS |
| CACCACCGTTGATGTTGATC+TGG | 0.473513 | 5.4:+84444 | MS.gene40415:CDS |
| TACTGCTGCAAGGAATTTCA+AGG | 0.474319 | 5.4:+86904 | MS.gene40415:CDS |
| TCTGGCTTGAGGATAGGTTA+TGG | 0.475732 | 5.4:+84409 | MS.gene40415:CDS |
| ACGAGGGAATCGGGAATATG+AGG | 0.480087 | 5.4:-84502 | None:intergenic |
| TTTGCCATACTTCACCTCAA+TGG | 0.480113 | 5.4:-85822 | None:intergenic |
| TCACTAGTACTATCACTAGA+TGG | 0.489482 | 5.4:-84547 | None:intergenic |
| AAAGCAGCTGCCCAAGAAAT+GGG | 0.490454 | 5.4:+87154 | MS.gene40415:CDS |
| CAGCCTCAGCTTCTGCAAGC+AGG | 0.491844 | 5.4:-87198 | None:intergenic |
| GCGGATCGACGACGAGGGTG+AGG | 0.494709 | 5.4:-84303 | None:intergenic |
| AGAAGTGAAATTGTTTCAGC+AGG | 0.495187 | 5.4:+86093 | MS.gene40415:CDS |
| AACATCAATGGAGGTGGTGG+TGG | 0.495643 | 5.4:-84587 | None:intergenic |
| CTGCTCGAAAGGATGCCATC+AGG | 0.495792 | 5.4:+84755 | MS.gene40415:CDS |
| ATATACTGACCGTTGCATAA+TGG | 0.498069 | 5.4:-85044 | None:intergenic |
| TGAGGGAATGATCTTATTGA+AGG | 0.505500 | 5.4:+87066 | MS.gene40415:CDS |
| AATTGAACAACCAGCGGAGG+AGG | 0.507192 | 5.4:+84186 | MS.gene40415:CDS |
| ACTATCACTAGATGGTTGTT+GGG | 0.511746 | 5.4:-84539 | None:intergenic |
| GGCCTTTCTTCTACTCCTGA+TGG | 0.515837 | 5.4:-84770 | None:intergenic |
| TGTCATCTATACTGAAGTCC+GGG | 0.516629 | 5.4:+86026 | MS.gene40415:CDS |
| GATATGGATTCACTGTTTGA+AGG | 0.517172 | 5.4:+84136 | MS.gene40415:CDS |
| AGAAACGTTCCAGAAAATAA+GGG | 0.517394 | 5.4:+84678 | MS.gene40415:CDS |
| TTCATCATCAGAAGCCTTGG+AGG | 0.517836 | 5.4:+85532 | MS.gene40415:CDS |
| AAGAATGGGAGCAAAACTTA+GGG | 0.522281 | 5.4:+85934 | MS.gene40415:CDS |
| GGAGGAGCCGGCGAAGGAGA+AGG | 0.524720 | 5.4:-84481 | None:intergenic |
| TGCCATCAGGAGTAGAAGAA+AGG | 0.526891 | 5.4:+84768 | MS.gene40415:CDS |
| GTTGTTCAATTTGGGCAGCA+GGG | 0.533020 | 5.4:-84174 | None:intergenic |
| ACACCTTTCTGCCGCTGAGA+AGG | 0.535473 | 5.4:+84897 | MS.gene40415:CDS |
| AGCAACATCAATGGAGGTGG+TGG | 0.537145 | 5.4:-84590 | None:intergenic |
| AAAACTTAGGGAATTTGCTA+GGG | 0.538995 | 5.4:+85946 | MS.gene40415:CDS |
| GGAATTTGCTAGGGTTTCTG+AGG | 0.541022 | 5.4:+85955 | MS.gene40415:CDS |
| TGTCCTTCTCAGCGGCAGAA+AGG | 0.542611 | 5.4:-84900 | None:intergenic |
| AAACGATCTGGCTTGAGGAT+AGG | 0.543009 | 5.4:+84403 | MS.gene40415:CDS |
| CTCGTTCAGGAAGAAAGAAT+GGG | 0.543231 | 5.4:+85920 | MS.gene40415:CDS |
| AAGTCTCAGTTTATCCTCCC+CGG | 0.543354 | 5.4:-86044 | None:intergenic |
| AGAGAATATCCAGATGGGAA+TGG | 0.545530 | 5.4:+86973 | MS.gene40415:CDS |
| ATTGAGATTGAAGAAGATCA+TGG | 0.546555 | 5.4:-84336 | None:intergenic |
| ATATGGATTCACTGTTTGAA+GGG | 0.547035 | 5.4:+84137 | MS.gene40415:CDS |
| TTTGAATCTTGAAAAGCTTG+AGG | 0.547220 | 5.4:+87006 | MS.gene40415:CDS |
| AACAGCAGGAGCAACATCAA+TGG | 0.549336 | 5.4:-84599 | None:intergenic |
| TCGGGAATATGAGGAGGAGC+CGG | 0.553209 | 5.4:-84493 | None:intergenic |
| TTCTTTCTTCCTGAACGAGA+AGG | 0.555128 | 5.4:-85916 | None:intergenic |
| AGAGATTCAGTCAACCATTG+AGG | 0.558406 | 5.4:+85808 | MS.gene40415:CDS |
| CAGAGAAGGAGAAAACGATC+TGG | 0.560854 | 5.4:+84391 | MS.gene40415:CDS |
| CGTTGATGTTGATCTGGATG+TGG | 0.564514 | 5.4:+84450 | MS.gene40415:CDS |
| GTTTCTGAGGAGGAAGCTAA+AGG | 0.564591 | 5.4:+85968 | MS.gene40415:CDS |
| TCTCAGCGGCAGAAAGGTGT+TGG | 0.569864 | 5.4:-84894 | None:intergenic |
| TGATAAATTGCAGGAGACTG+AGG | 0.570191 | 5.4:+87048 | MS.gene40415:CDS |
| AGAGAAGATATTCTCGTCAA+GGG | 0.574979 | 5.4:-84278 | None:intergenic |
| ATTTGCTAGGGTTTCTGAGG+AGG | 0.580411 | 5.4:+85958 | MS.gene40415:CDS |
| AGCAGCTATGTGAGAGTCGA+GGG | 0.583434 | 5.4:-84995 | None:intergenic |
| GCCGGCGAAGGAGAAGGAGA+AGG | 0.583638 | 5.4:-84475 | None:intergenic |
| ATTCAAAAGAAATGGAACAA+TGG | 0.589269 | 5.4:+85507 | MS.gene40415:CDS |
| CAGAGAAGATATTCTCGTCA+AGG | 0.589682 | 5.4:-84279 | None:intergenic |
| GGAGAAAACGATCTGGCTTG+AGG | 0.590628 | 5.4:+84398 | MS.gene40415:CDS |
| TGAGAAAGAGAATATCCAGA+TGG | 0.592249 | 5.4:+86967 | MS.gene40415:CDS |
| CGAATCTGAATGAACATGGA+AGG | 0.596912 | 5.4:+84106 | None:intergenic |
| GAGAGTTCCAGAACTTGAAG+CGG | 0.597506 | 5.4:+86868 | MS.gene40415:CDS |
| ATATGAGGAGGAGCCGGCGA+AGG | 0.598171 | 5.4:-84487 | None:intergenic |
| CGACTCTCACATAGCTGCTG+AGG | 0.598674 | 5.4:+84999 | MS.gene40415:CDS |
| AGTTGAGCAGTTGACGAGCA+TGG | 0.600096 | 5.4:-84723 | None:intergenic |
| TACTGACCGTTGCATAATGG+TGG | 0.601422 | 5.4:-85041 | None:intergenic |
| GGATCGAATCTGAATGAACA+TGG | 0.603041 | 5.4:+84102 | None:intergenic |
| GAGAAAGAGAATATCCAGAT+GGG | 0.606890 | 5.4:+86968 | MS.gene40415:CDS |
| AGGAGCAACATCAATGGAGG+TGG | 0.607030 | 5.4:-84593 | None:intergenic |
| GATAAATTGCAGGAGACTGA+GGG | 0.609466 | 5.4:+87049 | MS.gene40415:CDS |
| CTTCGCACCAACATCAGAGA+AGG | 0.609487 | 5.4:+84377 | MS.gene40415:CDS |
| AGCAAGATTAGAATTCTGAA+AGG | 0.612744 | 5.4:-84791 | None:intergenic |
| AGTCTCCTGCAATTTATCAA+GGG | 0.623518 | 5.4:-87044 | None:intergenic |
| TCTCCTGCTTGCAGAAGCTG+AGG | 0.624719 | 5.4:+87195 | MS.gene40415:CDS |
| GTAGCGCTAACACTAACAGC+AGG | 0.633509 | 5.4:-84613 | None:intergenic |
| ACATAGCATCCTTCAAGCAG+AGG | 0.634177 | 5.4:+86828 | MS.gene40415:CDS |
| CAGCAGCTATGTGAGAGTCG+AGG | 0.634230 | 5.4:-84996 | None:intergenic |
| AGTACAAGAATTAACCTGCA+AGG | 0.635054 | 5.4:-86137 | None:intergenic |
| ATCTGAATGAACATGGAAGG+TGG | 0.639736 | 5.4:+84109 | None:intergenic |
| CACATCCAGATCAACATCAA+CGG | 0.641777 | 5.4:-84449 | None:intergenic |
| GTGTTGGCTAACCATTTCAG+CGG | 0.645187 | 5.4:-84878 | None:intergenic |
| GAAGGAGAAAGAGTTAGCAA+TGG | 0.653490 | 5.4:+87084 | MS.gene40415:CDS |
| TTGAAGCGGATCGACGACGA+GGG | 0.659046 | 5.4:-84308 | None:intergenic |
| AGGGAATCGGGAATATGAGG+AGG | 0.659914 | 5.4:-84499 | None:intergenic |
| TGAATGAACATGGAAGGTGG+CGG | 0.662329 | 5.4:+84112 | None:intergenic |
| TGCCCAAATTGAACAACCAG+CGG | 0.662559 | 5.4:+84180 | MS.gene40415:CDS |
| GAGAAGATATTCTCGTCAAG+GGG | 0.662637 | 5.4:-84277 | None:intergenic |
| GGAGGAAGCTAAAGGATACA+GGG | 0.664518 | 5.4:+85976 | MS.gene40415:CDS |
| AGCAGGAGCAACATCAATGG+AGG | 0.665368 | 5.4:-84596 | None:intergenic |
| GGCTGCCCGAATAGCTAGTG+AGG | 0.669487 | 5.4:+86928 | MS.gene40415:CDS |
| ACTGAGACTTACAAACAATG+AGG | 0.670889 | 5.4:+86057 | MS.gene40415:CDS |
| TTTGAAGCGGATCGACGACG+AGG | 0.674654 | 5.4:-84309 | None:intergenic |
| CCAAATTGAACAACCAGCGG+AGG | 0.674887 | 5.4:+84183 | MS.gene40415:CDS |
| GATTTGTTTGTCCTTCTCAG+CGG | 0.680058 | 5.4:-84908 | None:intergenic |
| GTCATCTATACTGAAGTCCG+GGG | 0.682251 | 5.4:+86027 | MS.gene40415:CDS |
| ATTACTCCACCATTATGCAA+CGG | 0.686615 | 5.4:+85035 | MS.gene40415:CDS |
| ATCTATACTGAAGTCCGGGG+AGG | 0.704491 | 5.4:+86030 | MS.gene40415:CDS |
| GGGTAACAGTACTAACGACG+AGG | 0.718979 | 5.4:-84519 | None:intergenic |
| ATCCAGATCAACATCAACGG+TGG | 0.723332 | 5.4:-84446 | None:intergenic |
| GGTAACAGTACTAACGACGA+GGG | 0.735047 | 5.4:-84518 | None:intergenic |
| ATCAACATACAATTTCAAGG+CGG | 0.735712 | 5.4:+87246 | MS.gene40415:CDS |
| TGCTGCAAGGAATTTCAAGG+AGG | 0.736309 | 5.4:+86907 | MS.gene40415:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAGTAATAAATAAAAAT+AGG | - | chr5.4:86487-86506 | None:intergenic | 10.0% |
| !! | AAGGAATTTATTTATATCAT+TGG | - | chr5.4:85277-85296 | None:intergenic | 15.0% |
| !! | AGGAATTTATTTATATCATT+GGG | - | chr5.4:85276-85295 | None:intergenic | 15.0% |
| !! | AATTCTTGATAAAAAGCAAT+TGG | + | chr5.4:87318-87337 | MS.gene40415:CDS | 20.0% |
| !! | CAGATACAAAATTATACAAA+AGG | - | chr5.4:85361-85380 | None:intergenic | 20.0% |
| !! | TACAAAATTATACAAAAGGA+TGG | - | chr5.4:85357-85376 | None:intergenic | 20.0% |
| !! | TATTGTTAAAAACGTCTTAA+TGG | + | chr5.4:86653-86672 | MS.gene40415:intron | 20.0% |
| !!! | TTTTATCAAGAATTGATACA+AGG | - | chr5.4:87312-87331 | None:intergenic | 20.0% |
| ! | ATAAAACAATGACCAAAAAG+TGG | + | chr5.4:86531-86550 | MS.gene40415:intron | 25.0% |
| ! | ATCATTGCATTCAAAAGAAA+TGG | + | chr5.4:85499-85518 | MS.gene40415:CDS | 25.0% |
| ! | ATTCAAAAGAAATGGAACAA+TGG | + | chr5.4:85507-85526 | MS.gene40415:CDS | 25.0% |
| ! | GTCAATATCTCTAGATATAA+TGG | + | chr5.4:86388-86407 | MS.gene40415:intron | 25.0% |
| !! | ATAATTTTGTATCTGTTTGC+TGG | + | chr5.4:85366-85385 | MS.gene40415:intron | 25.0% |
| !!! | AATGTCATCACATTGTTTTT+AGG | + | chr5.4:86772-86791 | MS.gene40415:intron | 25.0% |
| !!! | TGTACTTATTTTTATGTGCT+TGG | + | chr5.4:86154-86173 | MS.gene40415:intron | 25.0% |
| !!! | TTTTAGTTCCTCTAAAAGAA+TGG | + | chr5.4:85239-85258 | MS.gene40415:intron | 25.0% |
| AAGAAACGTTCCAGAAAATA+AGG | + | chr5.4:84677-84696 | MS.gene40415:CDS | 30.0% | |
| AAGATAAATAATGTCGTCTC+TGG | + | chr5.4:85779-85798 | MS.gene40415:CDS | 30.0% | |
| AAGCAAAGCTAAAATGCATA+AGG | - | chr5.4:85296-85315 | None:intergenic | 30.0% | |
| AAGCTATGTTAGGTGAATAT+AGG | + | chr5.4:86256-86275 | MS.gene40415:intron | 30.0% | |
| AAGCTTGAGGAAGAAATTAA+AGG | + | chr5.4:87019-87038 | MS.gene40415:CDS | 30.0% | |
| AATAGAAGAAATGCAACCAT+GGG | - | chr5.4:86464-86483 | None:intergenic | 30.0% | |
| AGAAACGTTCCAGAAAATAA+GGG | + | chr5.4:84678-84697 | MS.gene40415:CDS | 30.0% | |
| AGAGGAACTAAAATTACACT+TGG | - | chr5.4:85232-85251 | None:intergenic | 30.0% | |
| AGCAAGATTAGAATTCTGAA+AGG | - | chr5.4:84794-84813 | None:intergenic | 30.0% | |
| ATATGGATTCACTGTTTGAA+GGG | + | chr5.4:84137-84156 | MS.gene40415:CDS | 30.0% | |
| ATCAACATACAATTTCAAGG+CGG | + | chr5.4:87246-87265 | MS.gene40415:CDS | 30.0% | |
| ATTGAGATTGAAGAAGATCA+TGG | - | chr5.4:84339-84358 | None:intergenic | 30.0% | |
| CAAATTAAAGGTAGGAACTA+GGG | - | chr5.4:86219-86238 | None:intergenic | 30.0% | |
| CGGAAGACATTTCAAATTTA+CGG | + | chr5.4:87266-87285 | MS.gene40415:CDS | 30.0% | |
| TAACATTGAGCTTTCAATAG+AGG | + | chr5.4:85619-85638 | MS.gene40415:CDS | 30.0% | |
| TCAAATTAAAGGTAGGAACT+AGG | - | chr5.4:86220-86239 | None:intergenic | 30.0% | |
| TCGATCAACATACAATTTCA+AGG | + | chr5.4:87243-87262 | MS.gene40415:CDS | 30.0% | |
| TCTTGCTTCTCTTAAATACA+TGG | + | chr5.4:84807-84826 | MS.gene40415:CDS | 30.0% | |
| TTGCATGGAAAAAAACAAAC+AGG | - | chr5.4:86727-86746 | None:intergenic | 30.0% | |
| TTTGAATCTTGAAAAGCTTG+AGG | + | chr5.4:87006-87025 | MS.gene40415:CDS | 30.0% | |
| ! | ACGGAAAGATTTGATTTCAA+TGG | + | chr5.4:87285-87304 | MS.gene40415:CDS | 30.0% |
| ! | ATTTACAGCATTCTAGAGAA+GGG | - | chr5.4:85450-85469 | None:intergenic | 30.0% |
| ! | TAAAAGAAAGAGTGTGCTAA+TGG | + | chr5.4:85670-85689 | MS.gene40415:CDS | 30.0% |
| ! | TAGGCTCTTTATTTAAGTCA+TGG | + | chr5.4:85399-85418 | MS.gene40415:intron | 30.0% |
| ! | TATTTACAGCATTCTAGAGA+AGG | - | chr5.4:85451-85470 | None:intergenic | 30.0% |
| ! | TGACAAAGGCATATACTAAT+TGG | - | chr5.4:85146-85165 | None:intergenic | 30.0% |
| ! | TTCCTCTGAAAGTAATAGTT+TGG | + | chr5.4:86366-86385 | MS.gene40415:intron | 30.0% |
| !! | AAAACTTAGGGAATTTGCTA+GGG | + | chr5.4:85946-85965 | MS.gene40415:CDS | 30.0% |
| !! | AAGCTTTTCAAGATTCAAAG+CGG | - | chr5.4:87005-87024 | None:intergenic | 30.0% |
| !! | CAAATCTAAAGCATCGATAA+AGG | - | chr5.4:84962-84981 | None:intergenic | 30.0% |
| !! | TTTAGCTTTGCTTCTCATTT+GGG | + | chr5.4:85303-85322 | MS.gene40415:intron | 30.0% |
| !!! | TTTTAGCTTTGCTTCTCATT+TGG | + | chr5.4:85302-85321 | MS.gene40415:intron | 30.0% |
| AAAGAATGGGAGCAAAACTT+AGG | + | chr5.4:85933-85952 | MS.gene40415:CDS | 35.0% | |
| AAGAATGGGAGCAAAACTTA+GGG | + | chr5.4:85934-85953 | MS.gene40415:CDS | 35.0% | |
| ACACTTGTTCATTTCCTCAA+TGG | + | chr5.4:86565-86584 | MS.gene40415:intron | 35.0% | |
| ACCTATGTAAAAACCCATTG+AGG | - | chr5.4:86582-86601 | None:intergenic | 35.0% | |
| ACTATCACTAGATGGTTGTT+GGG | - | chr5.4:84542-84561 | None:intergenic | 35.0% | |
| ACTGAGACTTACAAACAATG+AGG | + | chr5.4:86057-86076 | MS.gene40415:CDS | 35.0% | |
| AGAAGTGAAATTGTTTCAGC+AGG | + | chr5.4:86093-86112 | MS.gene40415:CDS | 35.0% | |
| AGAGAAGATATTCTCGTCAA+GGG | - | chr5.4:84281-84300 | None:intergenic | 35.0% | |
| AGTACAAGAATTAACCTGCA+AGG | - | chr5.4:86140-86159 | None:intergenic | 35.0% | |
| AGTCTCCTGCAATTTATCAA+GGG | - | chr5.4:87047-87066 | None:intergenic | 35.0% | |
| ATATACTGACCGTTGCATAA+TGG | - | chr5.4:85047-85066 | None:intergenic | 35.0% | |
| ATCAGCTTGTCTCAATGATT+CGG | - | chr5.4:84938-84957 | None:intergenic | 35.0% | |
| ATGTCATCTATACTGAAGTC+CGG | + | chr5.4:86025-86044 | MS.gene40415:CDS | 35.0% | |
| ATTACTCCACCATTATGCAA+CGG | + | chr5.4:85035-85054 | MS.gene40415:CDS | 35.0% | |
| ATTTAGCCTCACTAGCTATT+CGG | - | chr5.4:86937-86956 | None:intergenic | 35.0% | |
| CACTTGTTCATTTCCTCAAT+GGG | + | chr5.4:86566-86585 | MS.gene40415:intron | 35.0% | |
| GAAAATAATCCTCTGCTTGA+AGG | - | chr5.4:86840-86859 | None:intergenic | 35.0% | |
| GAATAGAAGAAATGCAACCA+TGG | - | chr5.4:86465-86484 | None:intergenic | 35.0% | |
| GACCAAACTATTACTTTCAG+AGG | - | chr5.4:86371-86390 | None:intergenic | 35.0% | |
| GAGAAAGAGAATATCCAGAT+GGG | + | chr5.4:86968-86987 | MS.gene40415:CDS | 35.0% | |
| GATATGGATTCACTGTTTGA+AGG | + | chr5.4:84136-84155 | MS.gene40415:CDS | 35.0% | |
| TACTATCACTAGATGGTTGT+TGG | - | chr5.4:84543-84562 | None:intergenic | 35.0% | |
| TCACTAGTACTATCACTAGA+TGG | - | chr5.4:84550-84569 | None:intergenic | 35.0% | |
| TGAGAAAGAGAATATCCAGA+TGG | + | chr5.4:86967-86986 | MS.gene40415:CDS | 35.0% | |
| TGAGGGAATGATCTTATTGA+AGG | + | chr5.4:87066-87085 | MS.gene40415:CDS | 35.0% | |
| TGGATGTCACGTCAAATTAA+AGG | - | chr5.4:86231-86250 | None:intergenic | 35.0% | |
| TGTCACGTCAAATTAAAGGT+AGG | - | chr5.4:86227-86246 | None:intergenic | 35.0% | |
| ! | AATGCACTCCATTCTTTTAG+AGG | - | chr5.4:85250-85269 | None:intergenic | 35.0% |
| ! | AATTGATAACCTTCTCGTTC+AGG | + | chr5.4:85907-85926 | MS.gene40415:CDS | 35.0% |
| ! | CAAAACTTAGGGAATTTGCT+AGG | + | chr5.4:85945-85964 | MS.gene40415:CDS | 35.0% |
| ! | CTTCACAAGCTTGTTCTAAT+TGG | - | chr5.4:84843-84862 | None:intergenic | 35.0% |
| ! | GCACACTCTTTCTTTTACAA+AGG | - | chr5.4:85667-85686 | None:intergenic | 35.0% |
| !! | CAATGATGTTGCTTTCTTCA+TGG | - | chr5.4:85486-85505 | None:intergenic | 35.0% |
| !! | TCCTCAATGGGTTTTTACAT+AGG | + | chr5.4:86578-86597 | MS.gene40415:intron | 35.0% |
| !! | TTAGCTTTGCTTCTCATTTG+GGG | + | chr5.4:85304-85323 | MS.gene40415:intron | 35.0% |
| !! | TTTGACATGTGTCCACTTTT+TGG | - | chr5.4:86546-86565 | None:intergenic | 35.0% |
| !!! | AGACAATTTTTTACCACCCA+TGG | + | chr5.4:86445-86464 | MS.gene40415:intron | 35.0% |
| !!! | AGATTTTGAAACCGCTGAAA+TGG | + | chr5.4:84867-84886 | MS.gene40415:CDS | 35.0% |
| !!! | TTTTTTTCCGCTTCAAGTTC+TGG | - | chr5.4:86878-86897 | None:intergenic | 35.0% |
| AAAAAGTTGCTACTGCTGCA+AGG | + | chr5.4:86894-86913 | MS.gene40415:CDS | 40.0% | |
| AAAACTCCCAACACAAGTCA+AGG | + | chr5.4:86418-86437 | MS.gene40415:intron | 40.0% | |
| AACAATGAGGAAAAGCTCTC+TGG | + | chr5.4:86070-86089 | MS.gene40415:CDS | 40.0% | |
| AGAGAATATCCAGATGGGAA+TGG | + | chr5.4:86973-86992 | MS.gene40415:CDS | 40.0% | |
| AGAGATTCAGTCAACCATTG+AGG | + | chr5.4:85808-85827 | MS.gene40415:CDS | 40.0% | |
| AGCCTTGGAGGTTAAAAAGA+TGG | + | chr5.4:85544-85563 | MS.gene40415:CDS | 40.0% | |
| ATCCAAGCTCAAGCTATGTT+AGG | + | chr5.4:86246-86265 | MS.gene40415:intron | 40.0% | |
| ATGTATGTCTACTCTAGCCT+TGG | + | chr5.4:85087-85106 | MS.gene40415:intron | 40.0% | |
| CACATCCAGATCAACATCAA+CGG | - | chr5.4:84452-84471 | None:intergenic | 40.0% | |
| CAGAGAAGATATTCTCGTCA+AGG | - | chr5.4:84282-84301 | None:intergenic | 40.0% | |
| CAGTCTCCTGCAATTTATCA+AGG | - | chr5.4:87048-87067 | None:intergenic | 40.0% | |
| CTCGTTCAGGAAGAAAGAAT+GGG | + | chr5.4:85920-85939 | MS.gene40415:CDS | 40.0% | |
| CTTCTTCAGTGACAGAGTTT+CGG | - | chr5.4:85882-85901 | None:intergenic | 40.0% | |
| GAAGGAGAAAGAGTTAGCAA+TGG | + | chr5.4:87084-87103 | MS.gene40415:CDS | 40.0% | |
| GAGAAGATATTCTCGTCAAG+GGG | - | chr5.4:84280-84299 | None:intergenic | 40.0% | |
| GATAAATTGCAGGAGACTGA+GGG | + | chr5.4:87049-87068 | MS.gene40415:CDS | 40.0% | |
| GGAGGTTAAAAAGATGGAGT+TGG | + | chr5.4:85550-85569 | MS.gene40415:CDS | 40.0% | |
| TACTGCTGCAAGGAATTTCA+AGG | + | chr5.4:86904-86923 | MS.gene40415:CDS | 40.0% | |
| TCAACCATTGAGGTGAAGTA+TGG | + | chr5.4:85818-85837 | MS.gene40415:CDS | 40.0% | |
| TCTCGTTCAGGAAGAAAGAA+TGG | + | chr5.4:85919-85938 | MS.gene40415:CDS | 40.0% | |
| TGATAAATTGCAGGAGACTG+AGG | + | chr5.4:87048-87067 | MS.gene40415:CDS | 40.0% | |
| TGTCATCTATACTGAAGTCC+GGG | + | chr5.4:86026-86045 | MS.gene40415:CDS | 40.0% | |
| TTCGACATCACCCATTTCTT+GGG | - | chr5.4:87167-87186 | None:intergenic | 40.0% | |
| TTCTTTCTTCCTGAACGAGA+AGG | - | chr5.4:85919-85938 | None:intergenic | 40.0% | |
| TTTAGCCTCACTAGCTATTC+GGG | - | chr5.4:86936-86955 | None:intergenic | 40.0% | |
| TTTGCCATACTTCACCTCAA+TGG | - | chr5.4:85825-85844 | None:intergenic | 40.0% | |
| ! | CTCCATCTTTTTAACCTCCA+AGG | - | chr5.4:85549-85568 | None:intergenic | 40.0% |
| ! | GAGTGTGCTAATGGATGAAT+TGG | + | chr5.4:85679-85698 | MS.gene40415:CDS | 40.0% |
| ! | GATTTGTTTGTCCTTCTCAG+CGG | - | chr5.4:84911-84930 | None:intergenic | 40.0% |
| ! | GTTTTCATCATCAGAAGCCT+TGG | + | chr5.4:85529-85548 | MS.gene40415:CDS | 40.0% |
| ! | GTTTTCTCCTTCTCTGATGT+TGG | - | chr5.4:84387-84406 | None:intergenic | 40.0% |
| ! | TGTATGTCTACTCTAGCCTT+GGG | + | chr5.4:85088-85107 | MS.gene40415:intron | 40.0% |
| !! | CTAGAGTCTGTGTTTTTGCA+TGG | - | chr5.4:86742-86761 | None:intergenic | 40.0% |
| !! | CTCATTCCTTGACTTGTGTT+GGG | - | chr5.4:86427-86446 | None:intergenic | 40.0% |
| !! | GTTTGCTGGCTTATTTCTCT+AGG | + | chr5.4:85380-85399 | MS.gene40415:intron | 40.0% |
| !! | TCTCATTCCTTGACTTGTGT+TGG | - | chr5.4:86428-86447 | None:intergenic | 40.0% |
| !!! | AGATCATGGTCGTTTTGAAG+CGG | - | chr5.4:84325-84344 | None:intergenic | 40.0% |
| !!! | GTATCGTCTCCCTTATTTTC+TGG | - | chr5.4:84690-84709 | None:intergenic | 40.0% |
| AAAAGCAGCTGCCCAAGAAA+TGG | + | chr5.4:87153-87172 | MS.gene40415:CDS | 45.0% | |
| AAAGCAGCTGCCCAAGAAAT+GGG | + | chr5.4:87154-87173 | MS.gene40415:CDS | 45.0% | |
| AACAGCAGGAGCAACATCAA+TGG | - | chr5.4:84602-84621 | None:intergenic | 45.0% | |
| AAGTCTCAGTTTATCCTCCC+CGG | - | chr5.4:86047-86066 | None:intergenic | 45.0% | |
| ACATAGCATCCTTCAAGCAG+AGG | + | chr5.4:86828-86847 | MS.gene40415:CDS | 45.0% | |
| AGAAGAAATGCAACCATGGG+TGG | - | chr5.4:86461-86480 | None:intergenic | 45.0% | |
| AGGAGGAAGCTAAAGGATAC+AGG | + | chr5.4:85975-85994 | MS.gene40415:CDS | 45.0% | |
| AGGCACCCTTGATAAATTGC+AGG | + | chr5.4:87039-87058 | MS.gene40415:CDS | 45.0% | |
| AGTACTAACGACGAGGGAAT+CGG | - | chr5.4:84515-84534 | None:intergenic | 45.0% | |
| ATCCAGATCAACATCAACGG+TGG | - | chr5.4:84449-84468 | None:intergenic | 45.0% | |
| ATTAACCTGCAAGGAAGCTC+TGG | - | chr5.4:86131-86150 | None:intergenic | 45.0% | |
| CACCTAACATAGCTTGAGCT+TGG | - | chr5.4:86251-86270 | None:intergenic | 45.0% | |
| CAGAGAAGGAGAAAACGATC+TGG | + | chr5.4:84391-84410 | MS.gene40415:CDS | 45.0% | |
| CGAAACTCTGTCACTGAAGA+AGG | + | chr5.4:85880-85899 | MS.gene40415:CDS | 45.0% | |
| CGTTGATGTTGATCTGGATG+TGG | + | chr5.4:84450-84469 | MS.gene40415:CDS | 45.0% | |
| CTTCGACATCACCCATTTCT+TGG | - | chr5.4:87168-87187 | None:intergenic | 45.0% | |
| GAGAGTTCCAGAACTTGAAG+CGG | + | chr5.4:86868-86887 | MS.gene40415:CDS | 45.0% | |
| GGAGGAAGCTAAAGGATACA+GGG | + | chr5.4:85976-85995 | MS.gene40415:CDS | 45.0% | |
| GGATTCACTGTTTGAAGGGA+TGG | + | chr5.4:84141-84160 | MS.gene40415:CDS | 45.0% | |
| GGTAACAGTACTAACGACGA+GGG | - | chr5.4:84521-84540 | None:intergenic | 45.0% | |
| GTCATCTATACTGAAGTCCG+GGG | + | chr5.4:86027-86046 | MS.gene40415:CDS | 45.0% | |
| GTTGTTCAATTTGGGCAGCA+GGG | - | chr5.4:84177-84196 | None:intergenic | 45.0% | |
| TACTGACCGTTGCATAATGG+TGG | - | chr5.4:85044-85063 | None:intergenic | 45.0% | |
| TGAAGGATGCTATGTCTTGC+TGG | - | chr5.4:86823-86842 | None:intergenic | 45.0% | |
| TGCCATCAGGAGTAGAAGAA+AGG | + | chr5.4:84768-84787 | MS.gene40415:CDS | 45.0% | |
| TGCCCAAATTGAACAACCAG+CGG | + | chr5.4:84180-84199 | MS.gene40415:CDS | 45.0% | |
| TGCTGCAAGGAATTTCAAGG+AGG | + | chr5.4:86907-86926 | MS.gene40415:CDS | 45.0% | |
| TTCATCATCAGAAGCCTTGG+AGG | + | chr5.4:85532-85551 | MS.gene40415:CDS | 45.0% | |
| ! | AAACGATCTGGCTTGAGGAT+AGG | + | chr5.4:84403-84422 | MS.gene40415:CDS | 45.0% |
| ! | ATTTGCTAGGGTTTCTGAGG+AGG | + | chr5.4:85958-85977 | MS.gene40415:CDS | 45.0% |
| ! | CTCCGCTGGTTGTTCAATTT+GGG | - | chr5.4:84185-84204 | None:intergenic | 45.0% |
| ! | GTTTCTGAGGAGGAAGCTAA+AGG | + | chr5.4:85968-85987 | MS.gene40415:CDS | 45.0% |
| ! | TCTGGCTTGAGGATAGGTTA+TGG | + | chr5.4:84409-84428 | MS.gene40415:CDS | 45.0% |
| !! | GGAATTTGCTAGGGTTTCTG+AGG | + | chr5.4:85955-85974 | MS.gene40415:CDS | 45.0% |
| !! | GTGTTGGCTAACCATTTCAG+CGG | - | chr5.4:84881-84900 | None:intergenic | 45.0% |
| AATTGAACAACCAGCGGAGG+AGG | + | chr5.4:84186-84205 | MS.gene40415:CDS | 50.0% | |
| ACGAGGGAATCGGGAATATG+AGG | - | chr5.4:84505-84524 | None:intergenic | 50.0% | |
| AGCAACATCAATGGAGGTGG+TGG | - | chr5.4:84593-84612 | None:intergenic | 50.0% | |
| AGCAGCTATGTGAGAGTCGA+GGG | - | chr5.4:84998-85017 | None:intergenic | 50.0% | |
| AGCAGGAGCAACATCAATGG+AGG | - | chr5.4:84599-84618 | None:intergenic | 50.0% | |
| AGGAGCAACATCAATGGAGG+TGG | - | chr5.4:84596-84615 | None:intergenic | 50.0% | |
| AGGGAATCGGGAATATGAGG+AGG | - | chr5.4:84502-84521 | None:intergenic | 50.0% | |
| AGTTGAGCAGTTGACGAGCA+TGG | - | chr5.4:84726-84745 | None:intergenic | 50.0% | |
| ATCTATACTGAAGTCCGGGG+AGG | + | chr5.4:86030-86049 | MS.gene40415:CDS | 50.0% | |
| CACCACCGTTGATGTTGATC+TGG | + | chr5.4:84444-84463 | MS.gene40415:CDS | 50.0% | |
| CCAAATTGAACAACCAGCGG+AGG | + | chr5.4:84183-84202 | MS.gene40415:CDS | 50.0% | |
| CTCTGCATCTTCTGCTCGAA+AGG | + | chr5.4:84744-84763 | MS.gene40415:CDS | 50.0% | |
| CTTCGCACCAACATCAGAGA+AGG | + | chr5.4:84377-84396 | MS.gene40415:CDS | 50.0% | |
| GGCCTTTCTTCTACTCCTGA+TGG | - | chr5.4:84773-84792 | None:intergenic | 50.0% | |
| GGGTAACAGTACTAACGACG+AGG | - | chr5.4:84522-84541 | None:intergenic | 50.0% | |
| GGTTGTTCAATTTGGGCAGC+AGG | - | chr5.4:84178-84197 | None:intergenic | 50.0% | |
| GTACTAACGACGAGGGAATC+GGG | - | chr5.4:84514-84533 | None:intergenic | 50.0% | |
| GTAGCGCTAACACTAACAGC+AGG | - | chr5.4:84616-84635 | None:intergenic | 50.0% | |
| GTTTACCCGTGCTTAAGCAC+AGG | - | chr5.4:86622-86641 | None:intergenic | 50.0% | |
| TCCAGACCTGTGCTTAAGCA+CGG | + | chr5.4:86613-86632 | MS.gene40415:intron | 50.0% | |
| ! | AACATCAATGGAGGTGGTGG+TGG | - | chr5.4:84590-84609 | None:intergenic | 50.0% |
| ! | CCTCCGCTGGTTGTTCAATT+TGG | - | chr5.4:84186-84205 | None:intergenic | 50.0% |
| ! | GGAGAAAACGATCTGGCTTG+AGG | + | chr5.4:84398-84417 | MS.gene40415:CDS | 50.0% |
| !! | TACTCTAGCCTTGGGTGTGA+GGG | + | chr5.4:85096-85115 | MS.gene40415:intron | 50.0% |
| ACACCTTTCTGCCGCTGAGA+AGG | + | chr5.4:84897-84916 | MS.gene40415:CDS | 55.0% | |
| AGTAGACACCCTCACACCCA+AGG | - | chr5.4:85107-85126 | None:intergenic | 55.0% | |
| CAGCAGCTATGTGAGAGTCG+AGG | - | chr5.4:84999-85018 | None:intergenic | 55.0% | |
| CCAGACCTGTGCTTAAGCAC+GGG | + | chr5.4:86614-86633 | MS.gene40415:intron | 55.0% | |
| CCGAGTGTCACAGTGCAACA+CGG | + | chr5.4:85169-85188 | MS.gene40415:intron | 55.0% | |
| CCGTGTTGCACTGTGACACT+CGG | - | chr5.4:85172-85191 | None:intergenic | 55.0% | |
| CGACTCTCACATAGCTGCTG+AGG | + | chr5.4:84999-85018 | MS.gene40415:CDS | 55.0% | |
| CGGCTGTATCCATTCCCATC+TGG | - | chr5.4:86985-87004 | None:intergenic | 55.0% | |
| CGTGTTGCACTGTGACACTC+GGG | - | chr5.4:85171-85190 | None:intergenic | 55.0% | |
| CTGCTCGAAAGGATGCCATC+AGG | + | chr5.4:84755-84774 | MS.gene40415:CDS | 55.0% | |
| GTGACACTCGGGGATGACAA+AGG | - | chr5.4:85160-85179 | None:intergenic | 55.0% | |
| GTGTCACAGTGCAACACGGT+AGG | + | chr5.4:85173-85192 | MS.gene40415:intron | 55.0% | |
| GTGTTGCACTGTGACACTCG+GGG | - | chr5.4:85170-85189 | None:intergenic | 55.0% | |
| TCCTTCTCCTTCTCCTTCGC+CGG | + | chr5.4:84474-84493 | MS.gene40415:CDS | 55.0% | |
| TCGGGAATATGAGGAGGAGC+CGG | - | chr5.4:84496-84515 | None:intergenic | 55.0% | |
| TCTCCTGCTTGCAGAAGCTG+AGG | + | chr5.4:87195-87214 | MS.gene40415:CDS | 55.0% | |
| TGATTCTTCTCCTCCTCCGC+TGG | - | chr5.4:84199-84218 | None:intergenic | 55.0% | |
| TGTCCTTCTCAGCGGCAGAA+AGG | - | chr5.4:84903-84922 | None:intergenic | 55.0% | |
| TTGAAGCGGATCGACGACGA+GGG | - | chr5.4:84311-84330 | None:intergenic | 55.0% | |
| ! | TCTCAGCGGCAGAAAGGTGT+TGG | - | chr5.4:84897-84916 | None:intergenic | 55.0% |
| ! | TTTGAAGCGGATCGACGACG+AGG | - | chr5.4:84312-84331 | None:intergenic | 55.0% |
| !! | ATCAATGGAGGTGGTGGTGG+TGG | - | chr5.4:84587-84606 | None:intergenic | 55.0% |
| !! | CATGGAAGGTGGCGGAGATA+TGG | + | chr5.4:84120-84139 | MS.gene40415:CDS | 55.0% |
| !! | CTACTCTAGCCTTGGGTGTG+AGG | + | chr5.4:85095-85114 | MS.gene40415:intron | 55.0% |
| !! | GGTGTGAGGGTGTCTACTCT+AGG | + | chr5.4:85109-85128 | MS.gene40415:intron | 55.0% |
| ATATGAGGAGGAGCCGGCGA+AGG | - | chr5.4:84490-84509 | None:intergenic | 60.0% | |
| CAGCCTCAGCTTCTGCAAGC+AGG | - | chr5.4:87201-87220 | None:intergenic | 60.0% | |
| CCCGTGCTTAAGCACAGGTC+TGG | - | chr5.4:86617-86636 | None:intergenic | 60.0% | |
| GAAGCTGATGCAGCTGCTGC+AGG | - | chr5.4:84247-84266 | None:intergenic | 60.0% | |
| GGCTGCCCGAATAGCTAGTG+AGG | + | chr5.4:86928-86947 | MS.gene40415:CDS | 60.0% | |
| TGCTGCCAGAGCTTCCTTGC+AGG | + | chr5.4:86123-86142 | MS.gene40415:CDS | 60.0% | |
| !! | AATGGAGGTGGTGGTGGTGG+TGG | - | chr5.4:84584-84603 | None:intergenic | 60.0% |
| GCCGGCGAAGGAGAAGGAGA+AGG | - | chr5.4:84478-84497 | None:intergenic | 65.0% | |
| GCTGATGCAGCTGCTGCAGG+AGG | - | chr5.4:84244-84263 | None:intergenic | 65.0% | |
| GCGGATCGACGACGAGGGTG+AGG | - | chr5.4:84306-84325 | None:intergenic | 70.0% | |
| GGAGGAGCCGGCGAAGGAGA+AGG | - | chr5.4:84484-84503 | None:intergenic | 70.0% | |
| !! | GGAGGTGGTGGTGGTGGTGG+TGG | - | chr5.4:84581-84600 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 84115 | 87369 | 84115 | ID=MS.gene40415 |
| chr5.4 | mRNA | 84115 | 87369 | 84115 | ID=MS.gene40415.t1;Parent=MS.gene40415 |
| chr5.4 | exon | 84115 | 85056 | 84115 | ID=MS.gene40415.t1.exon1;Parent=MS.gene40415.t1 |
| chr5.4 | CDS | 84115 | 85056 | 84115 | ID=cds.MS.gene40415.t1;Parent=MS.gene40415.t1 |
| chr5.4 | exon | 85458 | 86144 | 85458 | ID=MS.gene40415.t1.exon2;Parent=MS.gene40415.t1 |
| chr5.4 | CDS | 85458 | 86144 | 85458 | ID=cds.MS.gene40415.t1;Parent=MS.gene40415.t1 |
| chr5.4 | exon | 86794 | 87369 | 86794 | ID=MS.gene40415.t1.exon3;Parent=MS.gene40415.t1 |
| chr5.4 | CDS | 86794 | 87369 | 86794 | ID=cds.MS.gene40415.t1;Parent=MS.gene40415.t1 |
| Gene Sequence |
| Protein sequence |
