AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40560.t1 MTR_2g078090 89.096 376 21 3 1 357 1 375 0.0 566
MS.gene40560.t1 MTR_1g009840 80.501 359 36 6 1 357 1 327 0.0 522
MS.gene40560.t1 MTR_4g120340 52.973 185 76 4 15 193 9 188 7.94e-60 194
MS.gene40560.t1 MTR_2g078100 69.291 127 28 2 1 127 1 116 1.07e-46 155
MS.gene40560.t1 MTR_1g041745 46.471 170 82 4 68 235 54 216 1.23e-42 147
MS.gene40560.t1 MTR_1g075460 44.720 161 80 4 76 234 80 233 2.58e-40 142
MS.gene40560.t1 MTR_2g011000 47.794 136 63 3 85 214 65 198 2.05e-37 134
MS.gene40560.t1 MTR_1g041745 50.427 117 56 2 68 182 54 170 3.55e-33 122
MS.gene40560.t1 MTR_2g006210 32.308 260 148 9 23 278 56 291 8.89e-24 102
MS.gene40560.t1 MTR_6g043040 33.511 188 98 9 7 187 2 169 2.01e-19 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40560.t1 AT3G15000 56.198 363 114 5 1 318 1 363 4.37e-99 299
MS.gene40560.t1 AT3G06790 52.660 188 76 4 15 193 9 192 3.34e-56 184
MS.gene40560.t1 AT3G06790 52.128 188 77 4 15 193 9 192 3.90e-55 181
MS.gene40560.t1 AT1G72530 45.578 147 75 2 69 213 29 172 5.17e-46 155
MS.gene40560.t1 AT1G72530 44.371 151 75 3 69 213 29 176 1.03e-43 150
MS.gene40560.t1 AT1G32580 37.395 238 127 7 10 235 1 228 1.71e-42 148
MS.gene40560.t1 AT2G35240 48.125 160 75 5 78 235 78 231 2.18e-42 147
MS.gene40560.t1 AT1G11430 47.101 138 70 2 85 221 77 212 9.24e-38 135
MS.gene40560.t1 AT1G53260 73.913 92 24 0 136 227 3 94 4.21e-37 134
MS.gene40560.t1 AT1G53260 49.206 252 82 11 136 354 3 241 1.34e-36 134
MS.gene40560.t1 AT4G20020 31.988 322 162 11 5 309 4 285 8.23e-32 124
MS.gene40560.t1 AT4G20020 31.988 322 162 11 5 309 4 285 2.07e-31 123
MS.gene40560.t1 AT5G44780 38.095 105 63 2 91 193 78 182 4.94e-19 89.0

Find 161 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTTAGGGTTAGGGTTT+TGG 0.131447 2.3:+19677476 None:intergenic
AAAACCTTCGCTGAGGTTAT+TGG 0.223039 2.3:-19677150 MS.gene40560:CDS
ACTAGACACTACTTTGCTTT+TGG 0.255524 2.3:-19675942 MS.gene40560:CDS
CTAGGTGAGCCCTTCATTAA+TGG 0.274941 2.3:-19675179 MS.gene40560:intron
CCTCCTCCCAACAGTGGATA+TGG 0.278148 2.3:-19674756 MS.gene40560:CDS
TCAACGATCCTAACCCTAAC+TGG 0.286264 2.3:-19677293 MS.gene40560:CDS
GAGGAAGGTGGTTAGGGTTA+GGG 0.291280 2.3:+19677470 None:intergenic
AGAGGAAGGTGGTTAGGGTT+AGG 0.294206 2.3:+19677469 None:intergenic
GAGGCATCCCTGCCATGTTC+TGG 0.294548 2.3:+19674700 None:intergenic
GGAGGAGGTCCGCTCATGTT+GGG 0.310269 2.3:+19674798 None:intergenic
AGCGAGAGAGGAAGGTGGTT+AGG 0.323331 2.3:+19677463 None:intergenic
GAAAGAGAGAGCGGAGGATG+AGG 0.328429 2.3:+19677416 None:intergenic
AGCAAAATCGTTTCCTTTGG+TGG 0.332597 2.3:+19677261 None:intergenic
TTGGGAGGGTAAGCATTGTT+TGG 0.344705 2.3:+19674966 None:intergenic
TGCATATCCGCCTTGGTTGT+TGG 0.345680 2.3:+19674923 None:intergenic
GGTGGACGATTGGCCCAGTT+AGG 0.355387 2.3:+19677279 None:intergenic
GAGGAGGTCCGCTCATGTTG+GGG 0.358951 2.3:+19674799 None:intergenic
TTATTTGACCATCCAGCATT+TGG 0.363386 2.3:+19674678 None:intergenic
AGGCCTCCAGTGCAGAATTC+TGG 0.365211 2.3:-19674996 MS.gene40560:CDS
GGGGCATATCCGCCTTGATT+TGG 0.368377 2.3:+19674873 None:intergenic
GGGGCGTATCCGCCTTGATT+TGG 0.368787 2.3:+19674849 None:intergenic
AGTGGTGGTTGTGGTGGAGA+TGG 0.373183 2.3:+19677440 None:intergenic
GGGGTGTATCCGCCTTGATT+TGG 0.382042 2.3:+19674897 None:intergenic
GCGAGAGAGGAAGGTGGTTA+GGG 0.384328 2.3:+19677464 None:intergenic
GCATATCCGCCTTGGTTGTT+GGG 0.388442 2.3:+19674924 None:intergenic
GGGTATCCACCGCCTTGATT+TGG 0.394832 2.3:+19674825 None:intergenic
TCATGATACTTGGGATCATA+TGG 0.400148 2.3:+19675146 None:intergenic
GGAGGAGGTCGGCTCATGTT+AGG 0.401789 2.3:+19674774 None:intergenic
AGGGTATCCACCAGCATTGT+TGG 0.402771 2.3:+19674947 None:intergenic
TTCACATTCAAATAAGAATC+AGG 0.404060 2.3:+19675759 None:intergenic
TCTCTGGTCGGATCACCTTC+AGG 0.404735 2.3:+19677195 None:intergenic
GGAGGGTAAGCATTGTTTGG+AGG 0.406350 2.3:+19674969 None:intergenic
TCGAGCAAAATCGTTTCCTT+TGG 0.407598 2.3:+19677258 None:intergenic
AACCCACTCCTCATGATACT+TGG 0.409695 2.3:+19675136 None:intergenic
GGAAGAGGTGGTAGGGCGAG+TGG 0.413172 2.3:+19677317 None:intergenic
CGATTGGCCCAGTTAGGGTT+AGG 0.415665 2.3:+19677285 None:intergenic
TGCTCCTCAAAATAACTATC+CGG 0.416452 2.3:-19674733 MS.gene40560:CDS
TAGGTGAGCCCTTCATTAAT+GGG 0.416500 2.3:-19675178 MS.gene40560:CDS
AATGTGAAGGAGCAAGATTA+TGG 0.421958 2.3:-19675744 MS.gene40560:CDS
CGTTTCCTTTGGTGGACGAT+TGG 0.426666 2.3:+19677269 None:intergenic
ACGGGAGGTGATGGCGGCGG+CGG 0.427683 2.3:+19677371 None:intergenic
GAGAGCGGAGGATGAGGGAG+TGG 0.431055 2.3:+19677422 None:intergenic
GTGGAGAAAGCGCGGAAGGA+AGG 0.431154 2.3:+19677336 None:intergenic
TGGTGGAGATGGAGCGAGAG+AGG 0.431194 2.3:+19677451 None:intergenic
GTTAGGATCGTTGAGGGAAG+AGG 0.434294 2.3:+19677302 None:intergenic
AAAGGAACAGGCGCAATGAT+AGG 0.434856 2.3:-19675091 MS.gene40560:CDS
GGAAGGGAGGAGGATGTGAC+GGG 0.435127 2.3:+19677353 None:intergenic
GAGGATGTGACGGGAGGTGA+TGG 0.435767 2.3:+19677362 None:intergenic
TGAACACTGGCTTGTGGTTG+TGG 0.437124 2.3:-19677223 MS.gene40560:CDS
GGAGATGGAGCGAGAGAGGA+AGG 0.440256 2.3:+19677455 None:intergenic
GGGTATCCACCAGCATTGTT+GGG 0.447108 2.3:+19674948 None:intergenic
AAAGAGGACGGAGACGGCGG+AGG 0.447518 2.3:+19677394 None:intergenic
GCGTATCCGCCTTGATTTGG+AGG 0.451222 2.3:+19674852 None:intergenic
GGATGAGGGAGTGGTGGTTG+TGG 0.454915 2.3:+19677431 None:intergenic
AAAGAGAGAGCGGAGGATGA+GGG 0.457651 2.3:+19677417 None:intergenic
CTCGTGCTAATGAAAGGAAC+AGG 0.465708 2.3:-19675103 MS.gene40560:CDS
GCATATCCGCCTTGATTTGG+AGG 0.467209 2.3:+19674876 None:intergenic
TATCCACCGCCTTGATTTGG+AGG 0.469888 2.3:+19674828 None:intergenic
TGGAGAAAGCGCGGAAGGAA+GGG 0.471704 2.3:+19677337 None:intergenic
GGAAGAACCCATCGAACCTT+GGG 0.475427 2.3:+19675780 None:intergenic
GTGATGGCGGCGGCGGAAAG+AGG 0.477525 2.3:+19677378 None:intergenic
AGGAGGAGGTCCGCTCATGT+TGG 0.477573 2.3:+19674797 None:intergenic
GTGGACGATTGGCCCAGTTA+GGG 0.478383 2.3:+19677280 None:intergenic
GGAGAACGCGAGAGAAGATC+TGG 0.480186 2.3:+19677499 None:intergenic
AGCGGAGGATGAGGGAGTGG+TGG 0.484263 2.3:+19677425 None:intergenic
TGAGGGAGTGGTGGTTGTGG+TGG 0.485027 2.3:+19677434 None:intergenic
GTGTATCCGCCTTGATTTGG+AGG 0.485223 2.3:+19674900 None:intergenic
GGGTAAGCATTGTTTGGAGG+TGG 0.485288 2.3:+19674972 None:intergenic
CAACAAAACCAGAACATGGC+AGG 0.486858 2.3:-19674708 MS.gene40560:CDS
ACTATCAATAATCTCATCTC+TGG 0.487847 2.3:+19677179 None:intergenic
CGGCGGAAAGAGGACGGAGA+CGG 0.496211 2.3:+19677388 None:intergenic
AACTGCTTGCCCATTAATGA+AGG 0.499721 2.3:+19675169 None:intergenic
GCAGGGATGCCTCCAAATGC+TGG 0.500963 2.3:-19674690 MS.gene40560:CDS
CAGAACTGCCCAAGGTTCGA+TGG 0.506009 2.3:-19675788 MS.gene40560:CDS
GCTCCTCAAAATAACTATCC+GGG 0.508204 2.3:-19674732 MS.gene40560:CDS
ATCCGCCTTGGTTGTTGGGA+GGG 0.510147 2.3:+19674928 None:intergenic
AGGAAGAACCCATCGAACCT+TGG 0.510570 2.3:+19675779 None:intergenic
CGGAAAGAGGACGGAGACGG+CGG 0.514824 2.3:+19677391 None:intergenic
TTTGACCATCCAGCATTTGG+AGG 0.515696 2.3:+19674681 None:intergenic
ATCCACCGCCTTGATTTGGA+GGG 0.518306 2.3:+19674829 None:intergenic
GGAGGTCCGCTCATGTTGGG+GGG 0.523071 2.3:+19674801 None:intergenic
AGGAAGGGAGGAGGATGTGA+CGG 0.524718 2.3:+19677352 None:intergenic
AGGAGCACCATATCCACTGT+TGG 0.526278 2.3:+19674749 None:intergenic
GGATATGCCCCTCCAAATCA+AGG 0.528525 2.3:-19674861 MS.gene40560:CDS
AAGCGCGGAAGGAAGGGAGG+AGG 0.530215 2.3:+19677343 None:intergenic
GCCCCTCCAAATCAAGGCGG+TGG 0.530754 2.3:-19674831 MS.gene40560:CDS
TCCAATTGCAGAACTGCCCA+AGG 0.531629 2.3:-19675796 MS.gene40560:intron
CATATCCGCCTTGATTTGGA+GGG 0.532575 2.3:+19674877 None:intergenic
GCTTACCCTCCCAACAATGC+TGG 0.535219 2.3:-19674957 MS.gene40560:CDS
TTGGAGGTGCATATCCGCCT+TGG 0.535415 2.3:+19674916 None:intergenic
GGAGCACCATATCCACTGTT+GGG 0.536295 2.3:+19674750 None:intergenic
GTTAGGGTTAGGATCGTTGA+GGG 0.537327 2.3:+19677296 None:intergenic
GTGACGGGAGGTGATGGCGG+CGG 0.538120 2.3:+19677368 None:intergenic
ACCCACTCCTCATGATACTT+GGG 0.538686 2.3:+19675137 None:intergenic
GGATACGCCCCTCCAAATCA+AGG 0.539244 2.3:-19674837 MS.gene40560:CDS
CGTTGAGGGAAGAGGTGGTA+GGG 0.541372 2.3:+19677310 None:intergenic
GGATATGCACCTCCAAATCA+AGG 0.542378 2.3:-19674909 MS.gene40560:CDS
TATCCGCCTTGGTTGTTGGG+AGG 0.545068 2.3:+19674927 None:intergenic
GAGGCCTACTTTGCATGTCT+CGG 0.545839 2.3:+19675012 None:intergenic
AGGAGGTCCGCTCATGTTGG+GGG 0.547032 2.3:+19674800 None:intergenic
TGATTCTTATTTGAATGTGA+AGG 0.548912 2.3:-19675757 MS.gene40560:CDS
TATCCACTGTTGGGAGGAGG+AGG 0.551690 2.3:+19674759 None:intergenic
GATGGAGCGAGAGAGGAAGG+TGG 0.551999 2.3:+19677458 None:intergenic
CGTATCCGCCTTGATTTGGA+GGG 0.552670 2.3:+19674853 None:intergenic
AGAAAGCGCGGAAGGAAGGG+AGG 0.553501 2.3:+19677340 None:intergenic
GGAGGTCGGCTCATGTTAGG+AGG 0.555007 2.3:+19674777 None:intergenic
GGATACACCCCTCCAAATCA+AGG 0.555053 2.3:-19674885 MS.gene40560:CDS
TTTACAGTGAAGAAGAAGCT+AGG 0.556151 2.3:-19675986 MS.gene40560:intron
AGGGAGGAGGATGTGACGGG+AGG 0.558887 2.3:+19677356 None:intergenic
CCATATCCACTGTTGGGAGG+AGG 0.564256 2.3:+19674756 None:intergenic
ATCCACCAGCATTGTTGGGA+GGG 0.564357 2.3:+19674952 None:intergenic
AGAACTGCCCAAGGTTCGAT+GGG 0.567973 2.3:-19675787 MS.gene40560:CDS
ACAATGCTCGTGCTAATGAA+AGG 0.568451 2.3:-19675109 MS.gene40560:CDS
CGGCTCATGTTAGGAGGAGG+AGG 0.570215 2.3:+19674783 None:intergenic
CAACGATCCTAACCCTAACT+GGG 0.571742 2.3:-19677292 MS.gene40560:CDS
TCAATAATCTCATCTCTGGT+CGG 0.573073 2.3:+19677183 None:intergenic
GCGAGTGGAGAAAGCGCGGA+AGG 0.573434 2.3:+19677332 None:intergenic
TGAAAGGAGAAGGGAAAATG+TGG 0.578997 2.3:-19675039 MS.gene40560:CDS
GATGTGACGGGAGGTGATGG+CGG 0.579618 2.3:+19677365 None:intergenic
TCCACCGCCTTGATTTGGAG+GGG 0.583520 2.3:+19674830 None:intergenic
CTTGACCTGTCGTTATTACG+AGG 0.583533 2.3:+19675068 None:intergenic
TACCCTCCCAACAATGCTGG+TGG 0.585750 2.3:-19674954 MS.gene40560:CDS
GGTGGACCAGAATTCTGCAC+TGG 0.588014 2.3:+19674990 None:intergenic
TCGTTGAGGGAAGAGGTGGT+AGG 0.588704 2.3:+19677309 None:intergenic
ATCCCAAGTATCATGAGGAG+TGG 0.594093 2.3:-19675139 MS.gene40560:CDS
ACGGCGGAGGAAAGAGAGAG+CGG 0.594368 2.3:+19677407 None:intergenic
AGGATCGTTGAGGGAAGAGG+TGG 0.594815 2.3:+19677305 None:intergenic
CACTGTTGGGAGGAGGAGGT+CGG 0.595244 2.3:+19674763 None:intergenic
GTATCCGCCTTGATTTGGAG+GGG 0.596488 2.3:+19674854 None:intergenic
ATAGGCCTCGTAATAACGAC+AGG 0.597786 2.3:-19675073 MS.gene40560:CDS
GGTCGGCTCATGTTAGGAGG+AGG 0.598819 2.3:+19674780 None:intergenic
TGGCGGCGGCGGAAAGAGGA+CGG 0.599545 2.3:+19677382 None:intergenic
GAGCTTTCGTACAAACTGAA+AGG 0.599639 2.3:-19675903 MS.gene40560:intron
TGAACCGAGACATGCAAAGT+AGG 0.601888 2.3:-19675016 MS.gene40560:CDS
GGACCAGAATTCTGCACTGG+AGG 0.603026 2.3:+19674993 None:intergenic
CTGGGCCAATCGTCCACCAA+AGG 0.609373 2.3:-19677274 MS.gene40560:CDS
TCCCAAGTATCATGAGGAGT+GGG 0.609416 2.3:-19675138 MS.gene40560:CDS
CTCCTCAAAATAACTATCCG+GGG 0.615375 2.3:-19674731 MS.gene40560:CDS
GGATGCCTCCAAATGCTGGA+TGG 0.615571 2.3:-19674686 MS.gene40560:CDS
ATATCCGCCTTGATTTGGAG+GGG 0.616994 2.3:+19674878 None:intergenic
TATCCACCAGCATTGTTGGG+AGG 0.617145 2.3:+19674951 None:intergenic
AACAAAACCAGAACATGGCA+GGG 0.630196 2.3:-19674707 MS.gene40560:CDS
ACTGCTTGCCCATTAATGAA+GGG 0.632956 2.3:+19675170 None:intergenic
GTGAAGGAGCAAGATTATGG+AGG 0.633136 2.3:-19675741 MS.gene40560:intron
GCGGAGGAAAGAGAGAGCGG+AGG 0.645892 2.3:+19677410 None:intergenic
CCTTCCAATAACCTCAGCGA+AGG 0.647794 2.3:+19677146 None:intergenic
AGTTAGGGTTAGGATCGTTG+AGG 0.648596 2.3:+19677295 None:intergenic
CCTTCGCTGAGGTTATTGGA+AGG 0.652376 2.3:-19677146 MS.gene40560:intron
GTGGTTGTGGAGAAGCCTGA+AGG 0.665057 2.3:-19677210 MS.gene40560:CDS
GCACCATATCCACTGTTGGG+AGG 0.668110 2.3:+19674753 None:intergenic
ATATGATCCCAAGTATCATG+AGG 0.674281 2.3:-19675144 MS.gene40560:CDS
CGACCTCCTCCTCCCAACAG+TGG 0.676748 2.3:-19674762 MS.gene40560:CDS
TTACATCAAAACCTTCGCTG+AGG 0.678193 2.3:-19677157 MS.gene40560:CDS
GGATACCCTCCCAACAACCA+AGG 0.680141 2.3:-19674933 MS.gene40560:CDS
GGGGCAACAAAACCAGAACA+TGG 0.684830 2.3:-19674712 MS.gene40560:CDS
TAGGGCGAGTGGAGAAAGCG+CGG 0.697019 2.3:+19677328 None:intergenic
TACCCTCCCAACAACCAAGG+CGG 0.715418 2.3:-19674930 MS.gene40560:CDS
TACACCCCTCCAAATCAAGG+CGG 0.742876 2.3:-19674882 MS.gene40560:CDS
TACGCCCCTCCAAATCAAGG+CGG 0.767202 2.3:-19674834 MS.gene40560:CDS
TATGCCCCTCCAAATCAAGG+CGG 0.782403 2.3:-19674858 MS.gene40560:CDS
TATGCACCTCCAAATCAAGG+CGG 0.782403 2.3:-19674906 MS.gene40560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTTAAATTTTTTT+AGG - chr2.3:19675163-19675182 MS.gene40560:CDS 0.0%
!!! ATTTTTTTTAAATTTTTTTA+GGG - chr2.3:19675164-19675183 MS.gene40560:CDS 0.0%
!! AAAAAAAAAGTAATAGATAT+AGG + chr2.3:19676049-19676068 None:intergenic 10.0%
!! AAAAAAAAGTAATAGATATA+GGG + chr2.3:19676048-19676067 None:intergenic 10.0%
!!! TTAAAAAATAGTTAGTTTTT+GGG - chr2.3:19675440-19675459 MS.gene40560:intron 10.0%
!!! TTTAAAAAATAGTTAGTTTT+TGG - chr2.3:19675439-19675458 MS.gene40560:intron 10.0%
!! ACAATATAAACCTAAAAATA+CGG + chr2.3:19675122-19675141 None:intergenic 15.0%
!! TATAAGAAATTATGGAAAAT+GGG - chr2.3:19675489-19675508 MS.gene40560:intron 15.0%
!! TTATAAGAAATTATGGAAAA+TGG - chr2.3:19675488-19675507 MS.gene40560:intron 15.0%
!!! CTTTTATTATACTTAATTGT+AGG + chr2.3:19676578-19676597 None:intergenic 15.0%
!!! TAAAAAATAGTTAGTTTTTG+GGG - chr2.3:19675441-19675460 MS.gene40560:intron 15.0%
!!! TCTAAATAGCATTTTTTAAA+TGG + chr2.3:19676615-19676634 None:intergenic 15.0%
!! ACAAGTTCTCAAATATATTA+TGG + chr2.3:19675516-19675535 None:intergenic 20.0%
!! ACTCTGATTATTTATTTATG+TGG - chr2.3:19676156-19676175 MS.gene40560:intron 20.0%
!! ATACATCAAACAACAAATAT+TGG + chr2.3:19676953-19676972 None:intergenic 20.0%
!! GACATAATGAATATAATTAG+AGG + chr2.3:19676488-19676507 None:intergenic 20.0%
!! TATAGAAATAGCTTATACAT+AGG + chr2.3:19675848-19675867 None:intergenic 20.0%
!! TGATTATTTATTTATGTGGT+TGG - chr2.3:19676160-19676179 MS.gene40560:intron 20.0%
!! TTGTGCATTATAAGAAATTA+TGG - chr2.3:19675481-19675500 MS.gene40560:intron 20.0%
!!! AAAAAATAGTTAGTTTTTGG+GGG - chr2.3:19675442-19675461 MS.gene40560:intron 20.0%
!!! CTATTTTATTGAATTTGATG+TGG - chr2.3:19675322-19675341 MS.gene40560:intron 20.0%
!!! CTTTTTTATTCCGTATTTTT+AGG - chr2.3:19675109-19675128 MS.gene40560:CDS 20.0%
!!! GATTATAAACAAAGTGATTT+TGG - chr2.3:19675733-19675752 MS.gene40560:intron 20.0%
!!! TAATTTTTCTGAATTTGATG+TGG - chr2.3:19675380-19675399 MS.gene40560:intron 20.0%
! AAAACATCAGTATACTACAA+AGG + chr2.3:19676725-19676744 None:intergenic 25.0%
! AGAATACTATTATGTGAGAA+TGG - chr2.3:19675687-19675706 MS.gene40560:intron 25.0%
! CATTCCTTATATATATACAC+AGG + chr2.3:19676541-19676560 None:intergenic 25.0%
! CTATGAATTATAGCATTAGT+AGG - chr2.3:19676869-19676888 MS.gene40560:intron 25.0%
! GCATTATGAGAAATTGAATA+TGG - chr2.3:19675552-19675571 MS.gene40560:intron 25.0%
! TCATATTTCTTGATGTAGAA+TGG - chr2.3:19676927-19676946 MS.gene40560:intron 25.0%
! TGCTATTATGTGATTATGAA+TGG - chr2.3:19675266-19675285 MS.gene40560:intron 25.0%
! TTCACATTCAAATAAGAATC+AGG + chr2.3:19676422-19676441 None:intergenic 25.0%
!! AATAAGTTGAAAACAGCTTA+TGG - chr2.3:19675952-19675971 MS.gene40560:CDS 25.0%
!! ACTGAAAGGTATATAATACA+TGG - chr2.3:19676289-19676308 MS.gene40560:intron 25.0%
!! ATTGAATTTGATGTGGTTTT+AGG - chr2.3:19675329-19675348 MS.gene40560:intron 25.0%
!! TGATTCTTATTTGAATGTGA+AGG - chr2.3:19676421-19676440 MS.gene40560:intron 25.0%
!!! AAGAAATTTTGAAAGGAGAA+GGG - chr2.3:19677130-19677149 MS.gene40560:intron 25.0%
!!! ATTGAGAATATTGATTCTGA+AGG - chr2.3:19676098-19676117 MS.gene40560:intron 25.0%
!!! GATTATGAATGGATTGTTTT+CGG - chr2.3:19675277-19675296 MS.gene40560:intron 25.0%
AATGAATATAATTAGAGGCC+AGG + chr2.3:19676483-19676502 None:intergenic 30.0%
AATTATAGCATTAGTAGGTG+GGG - chr2.3:19676874-19676893 MS.gene40560:intron 30.0%
ACTATCAATAATCTCATCTC+TGG + chr2.3:19675002-19675021 None:intergenic 30.0%
ATTCTGTGAGAATGAATGTA+TGG - chr2.3:19675655-19675674 MS.gene40560:intron 30.0%
GAATTATAGCATTAGTAGGT+GGG - chr2.3:19676873-19676892 MS.gene40560:intron 30.0%
GTATAGTAACAGATGACAAT+TGG + chr2.3:19676801-19676820 None:intergenic 30.0%
GTCTCCTGTGTATATATATA+AGG - chr2.3:19676534-19676553 MS.gene40560:intron 30.0%
TAACCTTTGTGGTATACTAA+GGG - chr2.3:19676746-19676765 MS.gene40560:intron 30.0%
TGAATTATAGCATTAGTAGG+TGG - chr2.3:19676872-19676891 MS.gene40560:intron 30.0%
TGTCATCTGTTACTATACTT+TGG - chr2.3:19676803-19676822 MS.gene40560:intron 30.0%
! ACAGGTCAAGAAATTTTGAA+AGG - chr2.3:19677123-19677142 MS.gene40560:intron 30.0%
! CAAAACTTTTGTCAGTAGTT+AGG - chr2.3:19676022-19676041 MS.gene40560:intron 30.0%
! TCTGAATTTGATGTGGTTTT+AGG - chr2.3:19675387-19675406 MS.gene40560:intron 30.0%
! TTGAATGAATGGTTGTCTTT+TGG - chr2.3:19676127-19676146 MS.gene40560:intron 30.0%
!! AAAAGTTTTGTGAGACTGTT+TGG + chr2.3:19676012-19676031 None:intergenic 30.0%
!! AAAGTTTTGTGAGACTGTTT+GGG + chr2.3:19676011-19676030 None:intergenic 30.0%
!! CAAGAAATTTTGAAAGGAGA+AGG - chr2.3:19677129-19677148 MS.gene40560:intron 30.0%
!!! ATTTTTTTAGGGTTTTCCAC+TGG - chr2.3:19675175-19675194 MS.gene40560:CDS 30.0%
!!! GTTTGGATAAGCATCTTTTT+TGG - chr2.3:19675760-19675779 MS.gene40560:CDS 30.0%
!!! TTTTTTTAGGGTTTTCCACT+GGG - chr2.3:19675176-19675195 MS.gene40560:CDS 30.0%
AATGTGAAGGAGCAAGATTA+TGG - chr2.3:19676434-19676453 MS.gene40560:intron 35.0%
ATATGATCCCAAGTATCATG+AGG - chr2.3:19677034-19677053 MS.gene40560:intron 35.0%
ATTATAGCATTAGTAGGTGG+GGG - chr2.3:19676875-19676894 MS.gene40560:intron 35.0%
GTAACCTTTGTGGTATACTA+AGG - chr2.3:19676745-19676764 MS.gene40560:intron 35.0%
TAATGCACAACAAACAGAAC+AGG + chr2.3:19675471-19675490 None:intergenic 35.0%
TCAATAATCTCATCTCTGGT+CGG + chr2.3:19674998-19675017 None:intergenic 35.0%
TCATGATACTTGGGATCATA+TGG + chr2.3:19677035-19677054 None:intergenic 35.0%
TCCAAGATAGCTTATGACAA+CGG + chr2.3:19675922-19675941 None:intergenic 35.0%
TGCTCCTCAAAATAACTATC+CGG - chr2.3:19677445-19677464 MS.gene40560:CDS 35.0%
TTATTTGACCATCCAGCATT+TGG + chr2.3:19677503-19677522 None:intergenic 35.0%
TTTACAGCTTATAGCACAAG+TGG - chr2.3:19675805-19675824 MS.gene40560:intron 35.0%
TTTACAGTGAAGAAGAAGCT+AGG - chr2.3:19676192-19676211 MS.gene40560:intron 35.0%
! ACTAGACACTACTTTGCTTT+TGG - chr2.3:19676236-19676255 MS.gene40560:intron 35.0%
! ATTGGTAAAATGACTAGCCA+CGG + chr2.3:19676783-19676802 None:intergenic 35.0%
! CTGATGTTTTGTAACCTTTG+TGG - chr2.3:19676735-19676754 MS.gene40560:intron 35.0%
!! TGAAGTGTTGCTTATACAGA+GGG - chr2.3:19676678-19676697 MS.gene40560:intron 35.0%
!! TTGAAGTGTTGCTTATACAG+AGG - chr2.3:19676677-19676696 MS.gene40560:intron 35.0%
!!! AAAGTGATTTTGGCTCTGTT+TGG - chr2.3:19675743-19675762 MS.gene40560:CDS 35.0%
!!! TTTTTTGTTTCCCTCTCACT+AGG - chr2.3:19676981-19677000 MS.gene40560:intron 35.0%
AAAACCTTCGCTGAGGTTAT+TGG - chr2.3:19675028-19675047 MS.gene40560:CDS 40.0%
AAAGAATTTCCTTCACCCAG+TGG + chr2.3:19675194-19675213 None:intergenic 40.0%
AACAAAACCAGAACATGGCA+GGG - chr2.3:19677471-19677490 MS.gene40560:CDS 40.0%
AACTGCTTGCCCATTAATGA+AGG + chr2.3:19677012-19677031 None:intergenic 40.0%
AATACCCACAGCAAAGTCTT+GGG + chr2.3:19676640-19676659 None:intergenic 40.0%
ACAATGCTCGTGCTAATGAA+AGG - chr2.3:19677069-19677088 MS.gene40560:intron 40.0%
ACTGCTTGCCCATTAATGAA+GGG + chr2.3:19677011-19677030 None:intergenic 40.0%
AGCAAAATCGTTTCCTTTGG+TGG + chr2.3:19674920-19674939 None:intergenic 40.0%
CAACCCTTAGTATACCACAA+AGG + chr2.3:19676752-19676771 None:intergenic 40.0%
CTCCTCAAAATAACTATCCG+GGG - chr2.3:19677447-19677466 MS.gene40560:CDS 40.0%
GAAGGCTGTGTTTGAATGAA+TGG - chr2.3:19676116-19676135 MS.gene40560:intron 40.0%
GAGCTTTCGTACAAACTGAA+AGG - chr2.3:19676275-19676294 MS.gene40560:intron 40.0%
GCTCCTCAAAATAACTATCC+GGG - chr2.3:19677446-19677465 MS.gene40560:CDS 40.0%
TAGGTGAGCCCTTCATTAAT+GGG - chr2.3:19677000-19677019 MS.gene40560:intron 40.0%
TCGAGCAAAATCGTTTCCTT+TGG + chr2.3:19674923-19674942 None:intergenic 40.0%
TGAAAGGAGAAGGGAAAATG+TGG - chr2.3:19677139-19677158 MS.gene40560:intron 40.0%
TTACATCAAAACCTTCGCTG+AGG - chr2.3:19675021-19675040 MS.gene40560:CDS 40.0%
! AAGGAAACGATTTTGCTCGA+TGG - chr2.3:19674923-19674942 MS.gene40560:CDS 40.0%
! ATGGATGCGATTTTGAACAC+TGG - chr2.3:19674942-19674961 MS.gene40560:CDS 40.0%
! TTGGTAAAATGACTAGCCAC+GGG + chr2.3:19676782-19676801 None:intergenic 40.0%
!! AAGTGTTGCTTATACAGAGG+GGG - chr2.3:19676680-19676699 MS.gene40560:intron 40.0%
!! GAAGTGTTGCTTATACAGAG+GGG - chr2.3:19676679-19676698 MS.gene40560:intron 40.0%
!!! GCATCTTTTTTGGCTCTGTT+TGG - chr2.3:19675770-19675789 MS.gene40560:CDS 40.0%
AAAGGAACAGGCGCAATGAT+AGG - chr2.3:19677087-19677106 MS.gene40560:intron 45.0%
AACCCACTCCTCATGATACT+TGG + chr2.3:19677045-19677064 None:intergenic 45.0%
ACCCACTCCTCATGATACTT+GGG + chr2.3:19677044-19677063 None:intergenic 45.0%
AGATACCCAAGACTTTGCTG+TGG - chr2.3:19676632-19676651 MS.gene40560:intron 45.0%
AGTTAGGGTTAGGATCGTTG+AGG + chr2.3:19674886-19674905 None:intergenic 45.0%
ATAATTAGAGGCCAGGTGAC+AGG + chr2.3:19676476-19676495 None:intergenic 45.0%
ATAGGCCTCGTAATAACGAC+AGG - chr2.3:19677105-19677124 MS.gene40560:intron 45.0%
ATCCCAAGTATCATGAGGAG+TGG - chr2.3:19677039-19677058 MS.gene40560:intron 45.0%
CAACAAAACCAGAACATGGC+AGG - chr2.3:19677470-19677489 MS.gene40560:CDS 45.0%
CAACGATCCTAACCCTAACT+GGG - chr2.3:19674886-19674905 MS.gene40560:CDS 45.0%
CTAGGTGAGCCCTTCATTAA+TGG - chr2.3:19676999-19677018 MS.gene40560:intron 45.0%
CTCGTGCTAATGAAAGGAAC+AGG - chr2.3:19677075-19677094 MS.gene40560:intron 45.0%
CTTGACCTGTCGTTATTACG+AGG + chr2.3:19677113-19677132 None:intergenic 45.0%
GAATACCCACAGCAAAGTCT+TGG + chr2.3:19676641-19676660 None:intergenic 45.0%
GCCGTTGTCATAAGCTATCT+TGG - chr2.3:19675918-19675937 MS.gene40560:CDS 45.0%
GGATATGCACCTCCAAATCA+AGG - chr2.3:19677269-19677288 MS.gene40560:CDS 45.0%
GTGAAGGAGCAAGATTATGG+AGG - chr2.3:19676437-19676456 MS.gene40560:intron 45.0%
GTTAGGGTTAGGATCGTTGA+GGG + chr2.3:19674885-19674904 None:intergenic 45.0%
TATGCACCTCCAAATCAAGG+CGG - chr2.3:19677272-19677291 MS.gene40560:CDS 45.0%
TCAACGATCCTAACCCTAAC+TGG - chr2.3:19674885-19674904 MS.gene40560:CDS 45.0%
TCCCAAGTATCATGAGGAGT+GGG - chr2.3:19677040-19677059 MS.gene40560:intron 45.0%
TGAACCGAGACATGCAAAGT+AGG - chr2.3:19677162-19677181 MS.gene40560:CDS 45.0%
TTTGACCATCCAGCATTTGG+AGG + chr2.3:19677500-19677519 None:intergenic 45.0%
! GATACCCAAGACTTTGCTGT+GGG - chr2.3:19676633-19676652 MS.gene40560:intron 45.0%
! GTGGTTAGGGTTAGGGTTTT+GGG + chr2.3:19674704-19674723 None:intergenic 45.0%
! TGGTTAGGGTTAGGGTTTTG+GGG + chr2.3:19674703-19674722 None:intergenic 45.0%
! TTGGGAGGGTAAGCATTGTT+TGG + chr2.3:19677215-19677234 None:intergenic 45.0%
!! AGTGTTGCTTATACAGAGGG+GGG - chr2.3:19676681-19676700 MS.gene40560:intron 45.0%
!! ATATCCGCCTTGATTTGGAG+GGG + chr2.3:19677303-19677322 None:intergenic 45.0%
!! CATATCCGCCTTGATTTGGA+GGG + chr2.3:19677304-19677323 None:intergenic 45.0%
!! TGCCCCGGATAGTTATTTTG+AGG + chr2.3:19677452-19677471 None:intergenic 45.0%
!!! ATGTTCTGGTTTTGTTGCCC+CGG + chr2.3:19677467-19677486 None:intergenic 45.0%
!!! CGATTTTGAACACTGGCTTG+TGG - chr2.3:19674949-19674968 MS.gene40560:CDS 45.0%
!!! TAAAAAAGTAAATTTAATTT+TGG + chr2.3:19675097-19675116 None:intergenic 5.0%
!!! TTATAAAAAATGTTTTTTTT+TGG - chr2.3:19675233-19675252 MS.gene40560:intron 5.0%
AAAGAGAGAGCGGAGGATGA+GGG + chr2.3:19674764-19674783 None:intergenic 50.0%
ACCTTGGGCAGTTCTGCAAT+TGG + chr2.3:19676386-19676405 None:intergenic 50.0%
AGAACTGCCCAAGGTTCGAT+GGG - chr2.3:19676391-19676410 MS.gene40560:intron 50.0%
AGAGGAAGGTGGTTAGGGTT+AGG + chr2.3:19674712-19674731 None:intergenic 50.0%
AGGAAGAACCCATCGAACCT+TGG + chr2.3:19676402-19676421 None:intergenic 50.0%
ATCCACCAGCATTGTTGGGA+GGG + chr2.3:19677229-19677248 None:intergenic 50.0%
CCTTCCAATAACCTCAGCGA+AGG + chr2.3:19675035-19675054 None:intergenic 50.0%
CCTTCGCTGAGGTTATTGGA+AGG - chr2.3:19675032-19675051 MS.gene40560:CDS 50.0%
CTTATACAGAGGGGGGTGAA+TGG - chr2.3:19676688-19676707 MS.gene40560:intron 50.0%
GAGGAAGGTGGTTAGGGTTA+GGG + chr2.3:19674711-19674730 None:intergenic 50.0%
GAGGCCTACTTTGCATGTCT+CGG + chr2.3:19677169-19677188 None:intergenic 50.0%
GCATATCCGCCTTGGTTGTT+GGG + chr2.3:19677257-19677276 None:intergenic 50.0%
GGAAGAACCCATCGAACCTT+GGG + chr2.3:19676401-19676420 None:intergenic 50.0%
GGATACACCCCTCCAAATCA+AGG - chr2.3:19677293-19677312 MS.gene40560:CDS 50.0%
GGATATGCCCCTCCAAATCA+AGG - chr2.3:19677317-19677336 MS.gene40560:CDS 50.0%
GGGGCAACAAAACCAGAACA+TGG - chr2.3:19677466-19677485 MS.gene40560:CDS 50.0%
GGGTATCCACCAGCATTGTT+GGG + chr2.3:19677233-19677252 None:intergenic 50.0%
GTTAGGATCGTTGAGGGAAG+AGG + chr2.3:19674879-19674898 None:intergenic 50.0%
TAAGGGTTGAAGTTCACCCG+TGG - chr2.3:19676763-19676782 MS.gene40560:intron 50.0%
TACACCCCTCCAAATCAAGG+CGG - chr2.3:19677296-19677315 MS.gene40560:CDS 50.0%
TATCCACCAGCATTGTTGGG+AGG + chr2.3:19677230-19677249 None:intergenic 50.0%
TATGCCCCTCCAAATCAAGG+CGG - chr2.3:19677320-19677339 MS.gene40560:CDS 50.0%
TCCAATTGCAGAACTGCCCA+AGG - chr2.3:19676382-19676401 MS.gene40560:intron 50.0%
TGCATATCCGCCTTGGTTGT+TGG + chr2.3:19677258-19677277 None:intergenic 50.0%
! AGGGTATCCACCAGCATTGT+TGG + chr2.3:19677234-19677253 None:intergenic 50.0%
! CGTTTCCTTTGGTGGACGAT+TGG + chr2.3:19674912-19674931 None:intergenic 50.0%
! GGAGCACCATATCCACTGTT+GGG + chr2.3:19677431-19677450 None:intergenic 50.0%
! GGAGGGTAAGCATTGTTTGG+AGG + chr2.3:19677212-19677231 None:intergenic 50.0%
! GGGTAAGCATTGTTTGGAGG+TGG + chr2.3:19677209-19677228 None:intergenic 50.0%
! GGTGGTTAGGGTTAGGGTTT+TGG + chr2.3:19674705-19674724 None:intergenic 50.0%
! TAGGGTTTTCCACTGGGTGA+AGG - chr2.3:19675182-19675201 MS.gene40560:intron 50.0%
!! AGGAGCACCATATCCACTGT+TGG + chr2.3:19677432-19677451 None:intergenic 50.0%
!! ATCCACCGCCTTGATTTGGA+GGG + chr2.3:19677352-19677371 None:intergenic 50.0%
!! CGTATCCGCCTTGATTTGGA+GGG + chr2.3:19677328-19677347 None:intergenic 50.0%
!! GCATATCCGCCTTGATTTGG+AGG + chr2.3:19677305-19677324 None:intergenic 50.0%
!! GTATCCGCCTTGATTTGGAG+GGG + chr2.3:19677279-19677298 None:intergenic 50.0%
!! GTGTATCCGCCTTGATTTGG+AGG + chr2.3:19677281-19677300 None:intergenic 50.0%
!! TATCCACCGCCTTGATTTGG+AGG + chr2.3:19677353-19677372 None:intergenic 50.0%
!! TGAACACTGGCTTGTGGTTG+TGG - chr2.3:19674955-19674974 MS.gene40560:CDS 50.0%
AGCGAGAGAGGAAGGTGGTT+AGG + chr2.3:19674718-19674737 None:intergenic 55.0%
AGGAAGGGAGGAGGATGTGA+CGG + chr2.3:19674829-19674848 None:intergenic 55.0%
AGGATCGTTGAGGGAAGAGG+TGG + chr2.3:19674876-19674895 None:intergenic 55.0%
AGGCCTCCAGTGCAGAATTC+TGG - chr2.3:19677182-19677201 MS.gene40560:CDS 55.0%
ATCCGCCTTGGTTGTTGGGA+GGG + chr2.3:19677253-19677272 None:intergenic 55.0%
CAGAACTGCCCAAGGTTCGA+TGG - chr2.3:19676390-19676409 MS.gene40560:intron 55.0%
CCATATCCACTGTTGGGAGG+AGG + chr2.3:19677425-19677444 None:intergenic 55.0%
CCTCCTCCCAACAGTGGATA+TGG - chr2.3:19677422-19677441 MS.gene40560:CDS 55.0%
CGTTGAGGGAAGAGGTGGTA+GGG + chr2.3:19674871-19674890 None:intergenic 55.0%
GAAAGAGAGAGCGGAGGATG+AGG + chr2.3:19674765-19674784 None:intergenic 55.0%
GAAGGGCTCACCTAGTGAGA+GGG + chr2.3:19676994-19677013 None:intergenic 55.0%
GCACCATATCCACTGTTGGG+AGG + chr2.3:19677428-19677447 None:intergenic 55.0%
GCGAGAGAGGAAGGTGGTTA+GGG + chr2.3:19674717-19674736 None:intergenic 55.0%
GCTTACCCTCCCAACAATGC+TGG - chr2.3:19677221-19677240 MS.gene40560:CDS 55.0%
GGACCAGAATTCTGCACTGG+AGG + chr2.3:19677188-19677207 None:intergenic 55.0%
GGAGAACGCGAGAGAAGATC+TGG + chr2.3:19674682-19674701 None:intergenic 55.0%
GGATACCCTCCCAACAACCA+AGG - chr2.3:19677245-19677264 MS.gene40560:CDS 55.0%
GGATACGCCCCTCCAAATCA+AGG - chr2.3:19677341-19677360 MS.gene40560:CDS 55.0%
GGATGCCTCCAAATGCTGGA+TGG - chr2.3:19677492-19677511 MS.gene40560:CDS 55.0%
GGGGCATATCCGCCTTGATT+TGG + chr2.3:19677308-19677327 None:intergenic 55.0%
GGGGTGTATCCGCCTTGATT+TGG + chr2.3:19677284-19677303 None:intergenic 55.0%
GGGTATCCACCGCCTTGATT+TGG + chr2.3:19677356-19677375 None:intergenic 55.0%
GGTGGACCAGAATTCTGCAC+TGG + chr2.3:19677191-19677210 None:intergenic 55.0%
GTGGTTGTGGAGAAGCCTGA+AGG - chr2.3:19674968-19674987 MS.gene40560:CDS 55.0%
TACCCTCCCAACAACCAAGG+CGG - chr2.3:19677248-19677267 MS.gene40560:CDS 55.0%
TACCCTCCCAACAATGCTGG+TGG - chr2.3:19677224-19677243 MS.gene40560:CDS 55.0%
TACGCCCCTCCAAATCAAGG+CGG - chr2.3:19677344-19677363 MS.gene40560:CDS 55.0%
TATCCACTGTTGGGAGGAGG+AGG + chr2.3:19677422-19677441 None:intergenic 55.0%
TATCCGCCTTGGTTGTTGGG+AGG + chr2.3:19677254-19677273 None:intergenic 55.0%
TCGTTGAGGGAAGAGGTGGT+AGG + chr2.3:19674872-19674891 None:intergenic 55.0%
TCTCTGGTCGGATCACCTTC+AGG + chr2.3:19674986-19675005 None:intergenic 55.0%
TGAAGGGCTCACCTAGTGAG+AGG + chr2.3:19676995-19677014 None:intergenic 55.0%
! AGTGGTGGTTGTGGTGGAGA+TGG + chr2.3:19674741-19674760 None:intergenic 55.0%
! CGATTGGCCCAGTTAGGGTT+AGG + chr2.3:19674896-19674915 None:intergenic 55.0%
! GTGGACGATTGGCCCAGTTA+GGG + chr2.3:19674901-19674920 None:intergenic 55.0%
! TGGAGAAAGCGCGGAAGGAA+GGG + chr2.3:19674844-19674863 None:intergenic 55.0%
! TTGGAGGTGCATATCCGCCT+TGG + chr2.3:19677265-19677284 None:intergenic 55.0%
!! GCGTATCCGCCTTGATTTGG+AGG + chr2.3:19677329-19677348 None:intergenic 55.0%
!! TCCACCGCCTTGATTTGGAG+GGG + chr2.3:19677351-19677370 None:intergenic 55.0%
ACGGCGGAGGAAAGAGAGAG+CGG + chr2.3:19674774-19674793 None:intergenic 60.0%
AGCTCTGCTGTCCTGTCACC+TGG - chr2.3:19676462-19676481 MS.gene40560:intron 60.0%
AGGAGGAGGTCCGCTCATGT+TGG + chr2.3:19677384-19677403 None:intergenic 60.0%
AGGAGGTCCGCTCATGTTGG+GGG + chr2.3:19677381-19677400 None:intergenic 60.0%
CACTGTTGGGAGGAGGAGGT+CGG + chr2.3:19677418-19677437 None:intergenic 60.0%
CGGCTCATGTTAGGAGGAGG+AGG + chr2.3:19677398-19677417 None:intergenic 60.0%
CTGGGCCAATCGTCCACCAA+AGG - chr2.3:19674904-19674923 MS.gene40560:CDS 60.0%
GAGGAGGTCCGCTCATGTTG+GGG + chr2.3:19677382-19677401 None:intergenic 60.0%
GATGGAGCGAGAGAGGAAGG+TGG + chr2.3:19674723-19674742 None:intergenic 60.0%
GCAGGGATGCCTCCAAATGC+TGG - chr2.3:19677488-19677507 MS.gene40560:CDS 60.0%
GGAAGGGAGGAGGATGTGAC+GGG + chr2.3:19674828-19674847 None:intergenic 60.0%
GGAGATGGAGCGAGAGAGGA+AGG + chr2.3:19674726-19674745 None:intergenic 60.0%
GGAGGAGGTCCGCTCATGTT+GGG + chr2.3:19677383-19677402 None:intergenic 60.0%
GGATGAGGGAGTGGTGGTTG+TGG + chr2.3:19674750-19674769 None:intergenic 60.0%
GGGGCGTATCCGCCTTGATT+TGG + chr2.3:19677332-19677351 None:intergenic 60.0%
TACCCTCCCCCCAACATGAG+CGG - chr2.3:19677371-19677390 MS.gene40560:CDS 60.0%
TAGGGCGAGTGGAGAAAGCG+CGG + chr2.3:19674853-19674872 None:intergenic 60.0%
TGAGGGAGTGGTGGTTGTGG+TGG + chr2.3:19674747-19674766 None:intergenic 60.0%
TGGTGGAGATGGAGCGAGAG+AGG + chr2.3:19674730-19674749 None:intergenic 60.0%
! AGAAAGCGCGGAAGGAAGGG+AGG + chr2.3:19674841-19674860 None:intergenic 60.0%
! GAGGATGTGACGGGAGGTGA+TGG + chr2.3:19674819-19674838 None:intergenic 60.0%
! GAGGCATCCCTGCCATGTTC+TGG + chr2.3:19677481-19677500 None:intergenic 60.0%
! GATGTGACGGGAGGTGATGG+CGG + chr2.3:19674816-19674835 None:intergenic 60.0%
! GGAGGAGGTCGGCTCATGTT+AGG + chr2.3:19677407-19677426 None:intergenic 60.0%
! GGAGGTCGGCTCATGTTAGG+AGG + chr2.3:19677404-19677423 None:intergenic 60.0%
! GGTCGGCTCATGTTAGGAGG+AGG + chr2.3:19677401-19677420 None:intergenic 60.0%
! GGTGGACGATTGGCCCAGTT+AGG + chr2.3:19674902-19674921 None:intergenic 60.0%
! GTGGAGAAAGCGCGGAAGGA+AGG + chr2.3:19674845-19674864 None:intergenic 60.0%
AAAGAGGACGGAGACGGCGG+AGG + chr2.3:19674787-19674806 None:intergenic 65.0%
AAGCGCGGAAGGAAGGGAGG+AGG + chr2.3:19674838-19674857 None:intergenic 65.0%
AGCGGAGGATGAGGGAGTGG+TGG + chr2.3:19674756-19674775 None:intergenic 65.0%
CGACCTCCTCCTCCCAACAG+TGG - chr2.3:19677416-19677435 MS.gene40560:CDS 65.0%
CGGAAAGAGGACGGAGACGG+CGG + chr2.3:19674790-19674809 None:intergenic 65.0%
CGGCGGAAAGAGGACGGAGA+CGG + chr2.3:19674793-19674812 None:intergenic 65.0%
GAGAGCGGAGGATGAGGGAG+TGG + chr2.3:19674759-19674778 None:intergenic 65.0%
GCCCCTCCAAATCAAGGCGG+TGG - chr2.3:19677323-19677342 MS.gene40560:CDS 65.0%
GCGGAGGAAAGAGAGAGCGG+AGG + chr2.3:19674771-19674790 None:intergenic 65.0%
GGAAGAGGTGGTAGGGCGAG+TGG + chr2.3:19674864-19674883 None:intergenic 65.0%
GGAGGTCCGCTCATGTTGGG+GGG + chr2.3:19677380-19677399 None:intergenic 65.0%
GTCCGCTCATGTTGGGGGGA+GGG + chr2.3:19677376-19677395 None:intergenic 65.0%
! AGGGAGGAGGATGTGACGGG+AGG + chr2.3:19674825-19674844 None:intergenic 65.0%
! GCGAGTGGAGAAAGCGCGGA+AGG + chr2.3:19674849-19674868 None:intergenic 65.0%
GGTCCGCTCATGTTGGGGGG+AGG + chr2.3:19677377-19677396 None:intergenic 70.0%
TGGCGGCGGCGGAAAGAGGA+CGG + chr2.3:19674799-19674818 None:intergenic 70.0%
!! GTGACGGGAGGTGATGGCGG+CGG + chr2.3:19674813-19674832 None:intergenic 70.0%
!! GTGATGGCGGCGGCGGAAAG+AGG + chr2.3:19674803-19674822 None:intergenic 70.0%
!! ACGGGAGGTGATGGCGGCGG+CGG + chr2.3:19674810-19674829 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 19674671 19677529 19674671 ID=MS.gene40560
chr2.3 mRNA 19674671 19677529 19674671 ID=MS.gene40560.t1;Parent=MS.gene40560
chr2.3 exon 19677147 19677529 19677147 ID=MS.gene40560.t1.exon1;Parent=MS.gene40560.t1
chr2.3 CDS 19677147 19677529 19677147 ID=cds.MS.gene40560.t1;Parent=MS.gene40560.t1
chr2.3 exon 19675904 19676001 19675904 ID=MS.gene40560.t1.exon2;Parent=MS.gene40560.t1
chr2.3 CDS 19675904 19676001 19675904 ID=cds.MS.gene40560.t1;Parent=MS.gene40560.t1
chr2.3 exon 19675742 19675807 19675742 ID=MS.gene40560.t1.exon3;Parent=MS.gene40560.t1
chr2.3 CDS 19675742 19675807 19675742 ID=cds.MS.gene40560.t1;Parent=MS.gene40560.t1
chr2.3 exon 19674671 19675197 19674671 ID=MS.gene40560.t1.exon4;Parent=MS.gene40560.t1
chr2.3 CDS 19674671 19675197 19674671 ID=cds.MS.gene40560.t1;Parent=MS.gene40560.t1
Gene Sequence

>MS.gene40560

ATGGCGAACCAGATCTTCTCTCGCGTTCTCCCCAAAACCCTAACCCTAACCACCTTCCTCTCTCGCTCCATCTCCACCACAACCACCACTCCCTCATCCTCCGCTCTCTCTTTCCTCCGCCGTCTCCGTCCTCTTTCCGCCGCCGCCATCACCTCCCGTCACATCCTCCTCCCTTCCTTCCGCGCTTTCTCCACTCGCCCTACCACCTCTTCCCTCAACGATCCTAACCCTAACTGGGCCAATCGTCCACCAAAGGAAACGATTTTGCTCGATGGATGCGATTTTGAACACTGGCTTGTGGTTGTGGAGAAGCCTGAAGGTGATCCGACCAGAGATGAGATTATTGATAGTTACATCAAAACCTTCGCTGAGGTTATTGGAAGGTAGTAATCACTATACTCTATCTCAGTTTTACATATGATTCCAAAATTAAATTTACTTTTTTATTCCGTATTTTTAGGTTTATATTGTTATTTGTAATAGTAAATTTTCAATTTTTTTTAAATTTTTTTAGGGTTTTCCACTGGGTGAAGGAAATTCTTTGATAACTTGTGTTTGTTGTTTATAAAAAATGTTTTTTTTTGGTTGAATAAAATGCTATTATGTGATTATGAATGGATTGTTTTCGGAAAAAAATACTACTTTCTTCTTCTATTTTATTGAATTTGATGTGGTTTTAGGTTTATATTGTTTGTTTTGATTGCAACAGTAATTTTTCTGAATTTGATGTGGTTTTAGGTCTATGTTGTTCGTTTTGATTGCAGTGTTTTTAAAAAATAGTTAGTTTTTGGGGGTTTCCTGTTCTGTTTGTTGTGCATTATAAGAAATTATGGAAAATGGGTCCATAATATATTTGAGAACTTGTGTGTTCTGTTTGTTGTGCATTATGAGAAATTGAATATGGAAAATGAGTCAGTAATATCTTTGAGAACTTGTGTTTTGTTGTATAAAAAAAAATCAAATTTTATTTTTGAAAACAAGACTATTCTGTGAGAATGAATGTATGGTTTTGAAAAAGAATACTATTATGTGAGAATGGATAGTTGTCAAAAGTTTGCGACAGATTATAAACAAAGTGATTTTGGCTCTGTTTGGATAAGCATCTTTTTTGGCTCTGTTTGGATAAACATCTTATTTACAGCTTATAGCACAAGTGGTATCATCATGATAAGCGCCTATGTATAAGCTATTTCTATAGCAAAGATAATTTTTTTATTTTTTTTACATTTGTTTAGTATTAGCTATAAGCCGTTGTCATAAGCTATCTTGGAGAATTATGAAAATAAGTTGAAAACAGCTTATGGTCAATGTCACAAGCTGTTTTCTTAAGAAGTTCTCCCAAACAGTCTCACAAAACTTTTGTCAGTAGTTAGGCCCTATATCTATTACTTTTTTTTTTTGTATTGAAAGATAAAAGATAGTTATCTATTGAGAATATTGATTCTGAAGGCTGTGTTTGAATGAATGGTTGTCTTTTGGTCTGATACTCTGATTATTTATTTATGTGGTTGGTTTGTTATGTTTACAGTGAAGAAGAAGCTAGGAAGAACATATATTCTGTTTCAACTAGACACTACTTTGCTTTTGGAGCTCTTTGTTCTGAAGAGCTTTCGTACAAACTGAAAGGTATATAATACATGGTTCTCTAACATCTGAAACTCTTGTTACTCTTGTTTTCTTCTATATCACAACAGTTTAAATTTTCTGTTTGTCCAATTGCAGAACTGCCCAAGGTTCGATGGGTTCTTCCTGATTCTTATTTGAATGTGAAGGAGCAAGATTATGGAGGTAAGCTCTGCTGTCCTGTCACCTGGCCTCTAATTATATTCATTATGTCTATTGTTTATGAATATCTTTAATTGTGTCTCCTGTGTATATATATAAGGAATGTCATGCACAAGACTCCTACAATTAAGTATAATAAAAGTAAAAAGATATAATCCATTTAAAAAATGCTATTTAGATACCCAAGACTTTGCTGTGGGTATTCTAGCATACATGTTCACTTGAAGTGTTGCTTATACAGAGGGGGGTGAATGGCTGTTTTATATCCTTTGTAGTATACTGATGTTTTGTAACCTTTGTGGTATACTAAGGGTTGAAGTTCACCCGTGGCTAGTCATTTTACCAATTGTCATCTGTTACTATACTTTGGTTTGCTTATTAATCTGTTGATTTTTTTGTGTGATTAACTCGAGCTATGAATTATAGCATTAGTAGGTGGGGGCAATAAGTTTTATGTTGAGTCTTAGAATATCATATTTCTTGATGTAGAATGGCCAATATTTGTTGTTTGATGTATTTGATTTTTTTTTTGTTTCCCTCTCACTAGGTGAGCCCTTCATTAATGGGCAAGCAGTTCCATATGATCCCAAGTATCATGAGGAGTGGGTTAGAAACAATGCTCGTGCTAATGAAAGGAACAGGCGCAATGATAGGCCTCGTAATAACGACAGGTCAAGAAATTTTGAAAGGAGAAGGGAAAATGTGGTGAACCGAGACATGCAAAGTAGGCCTCCAGTGCAGAATTCTGGTCCACCTCCAAACAATGCTTACCCTCCCAACAATGCTGGTGGATACCCTCCCAACAACCAAGGCGGATATGCACCTCCAAATCAAGGCGGATACACCCCTCCAAATCAAGGCGGATATGCCCCTCCAAATCAAGGCGGATACGCCCCTCCAAATCAAGGCGGTGGATACCCTCCCCCCAACATGAGCGGACCTCCTCCTCCTAACATGAGCCGACCTCCTCCTCCCAACAGTGGATATGGTGCTCCTCAAAATAACTATCCGGGGCAACAAAACCAGAACATGGCAGGGATGCCTCCAAATGCTGGATGGTCAAATAATCAGTAG
Protein sequence

>MS.gene40560.t1

MANQIFSRVLPKTLTLTTFLSRSISTTTTTPSSSALSFLRRLRPLSAAAITSRHILLPSFRAFSTRPTTSSLNDPNPNWANRPPKETILLDGCDFEHWLVVVEKPEGDPTRDEIIDSYIKTFAEVIGSEEEARKNIYSVSTRHYFAFGALCSEELSYKLKELPKVRWVLPDSYLNVKEQDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRNNDRSRNFERRRENVVNRDMQSRPPVQNSGPPPNNAYPPNNAGGYPPNNQGGYAPPNQGGYTPPNQGGYAPPNQGGYAPPNQGGGYPPPNMSGPPPPNMSRPPPPNSGYGAPQNNYPGQQNQNMAGMPPNAGWSNNQ