AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40955

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40955.t1 MTR_3g097260 96.761 710 15 4 1 707 1 705 0.0 1402
MS.gene40955.t1 MTR_8g095170 74.184 674 143 11 39 707 20 667 0.0 978
MS.gene40955.t1 MTR_5g459450 65.330 698 198 8 41 706 47 732 0.0 907
MS.gene40955.t1 MTR_3g073100 62.534 726 212 12 28 707 21 732 0.0 879
MS.gene40955.t1 MTR_8g095170 74.028 566 130 8 39 600 20 572 0.0 834
MS.gene40955.t1 MTR_1g050740 50.683 732 281 13 48 706 56 780 0.0 694
MS.gene40955.t1 MTR_8g039100 53.165 711 273 10 48 706 48 750 0.0 692
MS.gene40955.t1 MTR_7g089950 49.025 769 290 13 11 704 48 789 0.0 683
MS.gene40955.t1 MTR_3g014650 51.257 716 266 12 48 706 84 773 0.0 666
MS.gene40955.t1 MTR_1g062740 41.272 802 291 14 49 703 47 815 0.0 558
MS.gene40955.t1 MTR_8g088930 37.647 765 352 17 49 701 9 760 1.97e-155 469
MS.gene40955.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 1.83e-13 74.3
MS.gene40955.t1 MTR_8g088930 37.435 764 354 16 49 701 9 759 2.40e-155 469
MS.gene40955.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 1.86e-13 74.3
MS.gene40955.t1 MTR_8g088930 40.034 587 282 12 49 569 9 591 6.25e-131 402
MS.gene40955.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 4.01e-13 73.2
MS.gene40955.t1 MTR_8g088930 40.034 587 282 12 49 569 9 591 6.36e-131 402
MS.gene40955.t1 MTR_8g088930 40.449 89 53 0 139 227 7 95 3.78e-13 73.2
MS.gene40955.t1 MTR_8g080860 40.000 175 105 0 49 223 16 190 2.47e-32 127
MS.gene40955.t1 MTR_8g080860 36.478 159 101 0 53 211 112 270 1.06e-21 96.3
MS.gene40955.t1 MTR_8g080860 38.406 138 85 0 52 189 134 271 5.21e-21 94.4
MS.gene40955.t1 MTR_8g080860 33.918 171 113 0 53 223 89 259 1.81e-20 92.8
MS.gene40955.t1 MTR_8g080860 40.000 175 105 0 49 223 12 186 3.47e-32 126
MS.gene40955.t1 MTR_8g080860 36.478 159 101 0 53 211 108 266 1.61e-21 95.9
MS.gene40955.t1 MTR_8g080860 38.406 138 85 0 52 189 130 267 6.87e-21 94.0
MS.gene40955.t1 MTR_8g080860 33.918 171 113 0 53 223 85 255 2.67e-20 92.0
MS.gene40955.t1 MTR_3g005910 79.167 72 15 0 431 502 1 72 2.41e-31 117
MS.gene40955.t1 MTR_6g043150 38.547 179 110 0 45 223 2 180 1.14e-30 123
MS.gene40955.t1 MTR_6g043150 36.269 193 115 2 53 245 79 263 1.60e-27 114
MS.gene40955.t1 MTR_6g043150 36.842 171 108 0 53 223 148 318 7.85e-24 103
MS.gene40955.t1 MTR_4g107460 40.782 179 105 1 49 226 5 183 3.33e-29 119
MS.gene40955.t1 MTR_4g107460 38.012 171 106 0 53 223 56 226 5.65e-29 119
MS.gene40955.t1 MTR_5g010840 33.846 195 114 1 44 223 103 297 9.13e-28 116
MS.gene40955.t1 MTR_5g010840 33.526 173 107 1 54 226 182 346 2.89e-24 105
MS.gene40955.t1 MTR_5g010840 39.394 99 60 0 54 152 266 364 4.13e-15 78.2
MS.gene40955.t1 MTR_8g007500 35.052 194 123 1 35 225 176 369 1.15e-27 117
MS.gene40955.t1 MTR_8g007500 36.719 128 81 0 55 182 245 372 1.06e-17 87.0
MS.gene40955.t1 MTR_8g007500 34.906 106 69 0 55 160 268 373 9.43e-14 74.7
MS.gene40955.t1 MTR_2g078470 36.257 171 109 0 53 223 79 249 1.75e-27 115
MS.gene40955.t1 MTR_2g078470 40.571 175 104 0 49 223 6 180 9.72e-27 113
MS.gene40955.t1 MTR_2g078470 35.088 171 111 0 53 223 148 318 3.15e-25 108
MS.gene40955.t1 MTR_2g078470 38.621 145 89 0 52 196 216 360 7.07e-22 98.6
MS.gene40955.t1 MTR_2g078470 33.728 169 112 0 54 222 195 363 1.99e-20 94.4
MS.gene40955.t1 MTR_2g078470 33.628 113 75 0 52 164 262 374 7.09e-11 65.1
MS.gene40955.t1 MTR_7g451440 33.684 190 126 0 36 225 175 364 2.58e-27 116
MS.gene40955.t1 MTR_7g451440 38.281 128 79 0 55 182 240 367 3.54e-18 88.2
MS.gene40955.t1 MTR_7g451440 36.220 127 81 0 100 226 193 319 2.93e-16 82.4
MS.gene40955.t1 MTR_7g451440 34.906 106 69 0 55 160 263 368 6.05e-13 72.0
MS.gene40955.t1 MTR_8g092090 39.264 163 99 0 60 222 47 209 4.10e-27 110
MS.gene40955.t1 MTR_8g092090 33.149 181 106 1 53 233 9 174 4.77e-21 93.6
MS.gene40955.t1 MTR_8g092090 36.054 147 94 0 53 199 86 232 1.68e-18 85.9
MS.gene40955.t1 MTR_8g080340 40.426 141 83 1 49 189 16 155 5.05e-27 108
MS.gene40955.t1 MTR_8g080340 38.614 101 62 0 126 226 23 123 4.62e-15 73.9
MS.gene40955.t1 MTR_4g099180 36.047 172 110 0 54 225 173 344 8.73e-27 114
MS.gene40955.t1 MTR_4g099180 35.938 128 82 0 55 182 220 347 8.40e-15 77.8
MS.gene40955.t1 MTR_4g099180 34.109 129 85 0 98 226 171 299 1.78e-14 76.6
MS.gene40955.t1 MTR_4g099180 33.962 106 70 0 55 160 243 348 1.62e-11 67.4
MS.gene40955.t1 MTR_8g095240 37.000 200 93 3 57 223 8 207 2.08e-26 113
MS.gene40955.t1 MTR_8g095240 35.119 168 108 1 56 222 132 299 1.01e-17 86.7
MS.gene40955.t1 MTR_8g095240 32.500 160 107 1 55 213 177 336 3.05e-12 69.7
MS.gene40955.t1 MTR_8g095240 34.058 138 68 1 53 190 222 336 5.51e-11 65.9
MS.gene40955.t1 MTR_5g058920 36.471 170 108 0 54 223 198 367 6.23e-25 108
MS.gene40955.t1 MTR_5g058920 39.062 128 78 0 55 182 245 372 3.97e-17 85.1
MS.gene40955.t1 MTR_3g072650 31.771 192 123 1 40 223 164 355 4.82e-23 102
MS.gene40955.t1 MTR_3g072650 36.719 128 81 0 55 182 233 360 7.94e-16 80.5
MS.gene40955.t1 MTR_3g072650 32.558 129 87 0 98 226 184 312 1.34e-13 73.6
MS.gene40955.t1 MTR_3g072650 31.771 192 123 1 40 223 164 355 6.04e-23 102
MS.gene40955.t1 MTR_3g072650 36.719 128 81 0 55 182 233 360 8.13e-16 80.9
MS.gene40955.t1 MTR_3g072650 32.558 129 87 0 98 226 184 312 1.43e-13 73.9
MS.gene40955.t1 MTR_8g080350 29.302 215 114 3 52 228 125 339 5.39e-18 87.0
MS.gene40955.t1 MTR_8g080350 27.136 199 144 1 53 250 103 301 7.08e-18 87.0
MS.gene40955.t1 MTR_8g080350 32.919 161 96 3 53 211 195 345 6.40e-16 80.9
MS.gene40955.t1 MTR_8g080350 31.967 122 81 1 104 225 87 206 6.67e-11 65.5
MS.gene40955.t1 MTR_8g080310 37.121 132 83 0 92 223 3 134 8.98e-18 81.3
MS.gene40955.t1 MTR_8g080310 36.242 149 95 0 75 223 9 157 1.08e-17 81.3
MS.gene40955.t1 MTR_8g080310 34.028 144 95 0 57 200 14 157 1.15e-13 69.7
MS.gene40955.t1 MTR_1g112280 28.646 192 112 3 14 204 574 741 4.42e-14 76.3
MS.gene40955.t1 MTR_3g023310 36.000 125 67 1 68 192 11 122 7.84e-14 70.9
MS.gene40955.t1 MTR_3g023310 34.426 122 67 1 92 213 12 120 8.88e-12 64.7
MS.gene40955.t1 MTR_4g099180 35.156 128 81 2 74 200 170 296 3.20e-13 71.6
MS.gene40955.t1 MTR_4g099180 35.043 117 76 0 98 214 171 287 4.88e-13 71.2
MS.gene40955.t1 MTR_4g099180 33.913 115 76 0 54 168 173 287 2.60e-12 68.9
MS.gene40955.t1 MTR_4g099180 35.043 117 76 0 98 214 171 287 8.60e-13 70.5
MS.gene40955.t1 MTR_4g099180 37.719 114 69 2 74 186 170 282 1.08e-12 70.1
MS.gene40955.t1 MTR_4g099180 33.913 115 76 0 54 168 173 287 5.96e-12 67.8
MS.gene40955.t1 MTR_8g092410 36.207 116 69 3 112 223 146 260 3.28e-12 69.3
MS.gene40955.t1 MTR_8g092410 31.757 148 96 3 80 222 135 282 5.20e-11 65.5
MS.gene40955.t1 MTR_4g085090 30.120 166 96 7 416 566 1495 1655 7.77e-12 69.7
MS.gene40955.t1 MTR_4g124590 30.539 167 94 8 416 566 1553 1713 3.57e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40955.t1 AT1G21980 63.978 744 215 11 4 704 16 749 0.0 945
MS.gene40955.t1 AT1G77740 66.667 705 186 8 40 706 60 753 0.0 941
MS.gene40955.t1 AT1G77740 66.667 705 186 8 40 706 60 753 0.0 941
MS.gene40955.t1 AT2G26420 59.371 731 247 9 1 707 1 705 0.0 848
MS.gene40955.t1 AT2G26420 58.808 738 254 9 1 707 1 719 0.0 845
MS.gene40955.t1 AT2G26420 58.808 738 254 9 1 707 1 719 0.0 845
MS.gene40955.t1 AT3G07960 52.699 704 277 11 48 706 22 714 0.0 712
MS.gene40955.t1 AT2G41210 48.840 733 275 13 48 706 65 771 0.0 677
MS.gene40955.t1 AT3G56960 49.248 731 280 17 48 706 67 778 0.0 664
MS.gene40955.t1 AT3G56960 49.248 731 280 17 48 706 67 778 0.0 664
MS.gene40955.t1 AT3G07960 52.284 591 240 8 48 600 22 608 0.0 598
MS.gene40955.t1 AT3G07960 54.189 561 219 7 48 570 22 582 0.0 597
MS.gene40955.t1 AT3G07960 54.189 561 219 7 48 570 22 582 0.0 597
MS.gene40955.t1 AT3G09920 41.699 777 315 18 49 703 49 809 0.0 538
MS.gene40955.t1 AT3G09920 41.699 777 315 18 49 703 49 809 0.0 538
MS.gene40955.t1 AT3G09920 41.699 777 315 18 49 703 49 809 0.0 538
MS.gene40955.t1 AT3G09920 41.699 777 315 18 49 703 49 809 0.0 538
MS.gene40955.t1 AT1G10900 41.076 762 324 17 49 703 7 750 4.11e-180 532
MS.gene40955.t1 AT1G10900 40.476 84 50 0 140 223 6 89 2.26e-11 67.8
MS.gene40955.t1 AT1G10900 41.076 762 324 17 49 703 7 750 4.11e-180 532
MS.gene40955.t1 AT1G10900 40.476 84 50 0 140 223 6 89 2.26e-11 67.8
MS.gene40955.t1 AT1G10900 41.076 762 324 17 49 703 7 750 4.11e-180 532
MS.gene40955.t1 AT1G10900 40.476 84 50 0 140 223 6 89 2.26e-11 67.8
MS.gene40955.t1 AT1G60890 47.465 434 172 6 316 703 342 765 6.06e-127 395
MS.gene40955.t1 AT1G60890 48.454 194 100 0 47 240 5 198 1.81e-54 200
MS.gene40955.t1 AT1G60890 47.465 434 172 6 316 703 354 777 1.06e-126 395
MS.gene40955.t1 AT1G60890 48.485 198 102 0 43 240 13 210 6.09e-55 202
MS.gene40955.t1 AT4G01190 38.346 399 175 10 358 704 12 391 1.04e-77 254
MS.gene40955.t1 AT4G01190 38.346 399 175 10 358 704 22 401 1.37e-77 254
MS.gene40955.t1 AT4G01190 38.346 399 175 10 358 704 22 401 1.37e-77 254
MS.gene40955.t1 AT1G01460 45.175 228 122 2 342 569 4 228 1.69e-61 212
MS.gene40955.t1 AT1G01460 48.454 97 44 2 612 707 332 423 8.47e-18 87.0
MS.gene40955.t1 AT1G21920 31.390 223 150 2 1 223 125 344 1.06e-26 112
MS.gene40955.t1 AT1G21920 37.209 129 81 0 55 183 222 350 1.25e-15 79.7
MS.gene40955.t1 AT1G21920 34.109 129 85 0 98 226 173 301 3.05e-12 69.3
MS.gene40955.t1 AT1G77660 29.596 223 157 0 1 223 126 348 1.53e-26 113
MS.gene40955.t1 AT1G77660 35.659 129 83 0 55 183 226 354 5.36e-15 78.2
MS.gene40955.t1 AT1G77660 33.333 129 86 0 98 226 177 305 1.97e-14 76.6
MS.gene40955.t1 AT1G21920 31.390 223 150 2 1 223 125 344 2.67e-26 112
MS.gene40955.t1 AT1G21920 37.209 129 81 0 55 183 222 350 1.48e-15 80.1
MS.gene40955.t1 AT1G21920 34.109 129 85 0 98 226 173 301 3.88e-12 69.3
MS.gene40955.t1 AT4G17080 34.118 170 112 0 54 223 258 427 9.44e-26 112
MS.gene40955.t1 AT4G17080 36.719 128 81 0 55 182 305 432 4.22e-18 88.6
MS.gene40955.t1 AT4G17080 32.738 168 107 2 59 226 223 384 3.12e-16 82.8
MS.gene40955.t1 AT2G35170 32.821 195 128 2 29 223 205 396 6.89e-25 109
MS.gene40955.t1 AT2G35170 36.719 128 81 0 55 182 274 401 1.28e-18 90.1
MS.gene40955.t1 AT2G35170 34.146 123 81 0 104 226 231 353 1.26e-14 77.4
MS.gene40955.t1 AT1G75010 29.375 160 88 3 46 204 595 730 3.40e-12 70.5
MS.gene40955.t1 AT1G71010 30.120 166 96 7 416 566 1417 1577 9.64e-12 69.3

Find 206 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATCTTCAATTGGGTATT+AGG 0.146414 3.2:-81118295 MS.gene40955:intron
TCTGATGTAATCCTTTATTT+TGG 0.181773 3.2:-81115678 MS.gene40955:CDS
CTTGGTTTCAAGAGCTAAAA+TGG 0.216088 3.2:-81117176 MS.gene40955:intron
TATGAAATCCCTAAACCTTT+TGG 0.258022 3.2:+81115545 None:intergenic
AGAAACATGTTGATAGTAAC+TGG 0.261885 3.2:+81117536 None:intergenic
TTGATCCAAAGGAGAAATTC+TGG 0.268700 3.2:-81118116 MS.gene40955:CDS
GCTATATTCCAAAAGGTTTA+GGG 0.268928 3.2:-81115553 MS.gene40955:CDS
CCATTATTCCCTCTGCTTCC+AGG 0.269835 3.2:+81117037 None:intergenic
AGCTATATTCCAAAAGGTTT+AGG 0.285097 3.2:-81115554 MS.gene40955:CDS
GGTGTTGGTGTTGGTGATGT+AGG 0.285814 3.2:-81118419 MS.gene40955:CDS
AGAAACATTATTAACTATTT+CGG 0.287516 3.2:-81119260 MS.gene40955:CDS
GGAGTGTTTCATCAGGGAAT+TGG 0.303949 3.2:-81118619 MS.gene40955:CDS
GTGATACTTATAAAGGTTCT+TGG 0.319831 3.2:-81118895 MS.gene40955:CDS
CTTGTCCAGAATTTCTCCTT+TGG 0.321711 3.2:+81118111 None:intergenic
CACACTCTCTCCGCTCTTGC+TGG 0.322769 3.2:+81115771 None:intergenic
GAGTGTTTCATCAGGGAATT+GGG 0.334465 3.2:-81118618 MS.gene40955:CDS
CAGACCCGATTTATTGTAAT+GGG 0.335217 3.2:-81117351 MS.gene40955:CDS
TGATAGAGACTGTGAGTTCC+TGG 0.341577 3.2:-81117055 MS.gene40955:CDS
ACTACTGTCCCGTGGTGTTC+AGG 0.341724 3.2:-81118026 MS.gene40955:intron
GGCGTAAACTTGGAACCTTC+TGG 0.344560 3.2:+81118081 None:intergenic
CATTGCCCATTACAATAAAT+CGG 0.346280 3.2:+81117346 None:intergenic
ACTCACAGAAACCCTCTTCT+TGG 0.347045 3.2:+81118586 None:intergenic
AATATCCTTACGGAGTTTAT+CGG 0.347395 3.2:+81117257 None:intergenic
TTTGATTCTTAATCTTCAAT+TGG 0.355941 3.2:-81118303 MS.gene40955:CDS
TCAGGGTCCATGGAAGGTTC+TGG 0.355954 3.2:-81118938 MS.gene40955:CDS
GTTCATTGTGTCAAACCTAT+TGG 0.370452 3.2:-81117477 MS.gene40955:CDS
TCACCTAATGAGTTGTGTTC+TGG 0.371594 3.2:-81116952 MS.gene40955:intron
TGTCAATGATGCCAAAATAA+AGG 0.379878 3.2:+81115667 None:intergenic
TACCTTTCTTCCATTCTCCT+TGG 0.380033 3.2:+81119023 None:intergenic
CCTTTCGCCTGGAGCAGTCT+TGG 0.384297 3.2:-81117194 MS.gene40955:CDS
CTCGTTGGTTACGAAATTCC+TGG 0.384416 3.2:-81117502 MS.gene40955:CDS
ACCGGGTTATACTGTTTGTA+AGG 0.392688 3.2:-81118342 MS.gene40955:CDS
GTAAACACACCTTTCCCTTT+CGG 0.395044 3.2:+81118653 None:intergenic
GGAGGTATATGTGGAGGAAT+GGG 0.400881 3.2:-81118778 MS.gene40955:CDS
GTATACAGTGGAAGTTTATC+AGG 0.401485 3.2:-81119097 MS.gene40955:CDS
CTTGACTTCAGACTTCTTCA+AGG 0.404538 3.2:+81117743 None:intergenic
GGCCATGTCAGGTGCTCATC+AGG 0.408142 3.2:-81117566 MS.gene40955:intron
ATTTGTATTTGGGAGCTTGA+TGG 0.412365 3.2:-81118527 MS.gene40955:CDS
CCACTGTATACGTCGCCGTT+TGG 0.415330 3.2:+81119109 None:intergenic
TTGATTCTTAATCTTCAATT+GGG 0.418290 3.2:-81118302 MS.gene40955:CDS
GGGAAATTCTCATGGCCATC+AGG 0.424679 3.2:-81118986 MS.gene40955:CDS
TATGTGGGTTGTTGGGAGAA+TGG 0.426025 3.2:-81118680 MS.gene40955:CDS
GTGTTGGTGTTGGTGATGTA+GGG 0.426176 3.2:-81118418 MS.gene40955:CDS
GATGGAAGTGAATCAGAGAT+TGG 0.430424 3.2:-81118443 MS.gene40955:CDS
CCTGGAAGCAGAGGGAATAA+TGG 0.435359 3.2:-81117037 MS.gene40955:CDS
ACAAATAGCAAGCATGTAAT+CGG 0.437021 3.2:+81117854 None:intergenic
TGATACTTATAAAGGTTCTT+GGG 0.438562 3.2:-81118894 MS.gene40955:CDS
GGAATCGTTATGTGGGTTGT+TGG 0.438945 3.2:-81118688 MS.gene40955:CDS
TTTGTATTTGGGAGCTTGAT+GGG 0.440443 3.2:-81118526 MS.gene40955:CDS
CGATGGGGATGTTAAGAAAC+CGG 0.442381 3.2:-81118360 MS.gene40955:CDS
ATACCAGAACACAACTCATT+AGG 0.443166 3.2:+81116949 None:intergenic
ATCTAAAATCCACCGATTGA+TGG 0.444477 3.2:+81118055 None:intergenic
GGATTGGATCAGCAGCAAAC+TGG 0.447072 3.2:-81115741 MS.gene40955:CDS
TTAATTCCCAGCCGGATTAG+AGG 0.447492 3.2:+81115798 None:intergenic
GTTGGGTATTTAGGCATTTG+AGG 0.449375 3.2:-81117899 MS.gene40955:intron
TTGGGTATTTAGGCATTTGA+GGG 0.449393 3.2:-81117898 MS.gene40955:intron
AAGGTTCTTGGGTTTCTGAT+AGG 0.451720 3.2:-81118883 MS.gene40955:CDS
CGTGATGGGAGTGTTTCATC+AGG 0.451975 3.2:-81118626 MS.gene40955:CDS
TTTCATACACAGAATCTTTG+TGG 0.451995 3.2:-81115529 MS.gene40955:CDS
GTGGAAGGTGATACTTATAA+AGG 0.453599 3.2:-81118902 MS.gene40955:CDS
ACAGACCCGATTTATTGTAA+TGG 0.455479 3.2:-81117352 MS.gene40955:intron
TCTAAAATCCACCGATTGAT+GGG 0.456122 3.2:+81118056 None:intergenic
TCTGATAGGAAACATGGGTT+TGG 0.456876 3.2:-81118869 MS.gene40955:CDS
CTTGGGATCAACGGCTGAGA+TGG 0.457259 3.2:+81115575 None:intergenic
GATTACATGCTTGCTATTTG+TGG 0.457685 3.2:-81117852 MS.gene40955:CDS
ATGGGGAAGGGAGGTATATG+TGG 0.461629 3.2:-81118787 MS.gene40955:CDS
ATACCAGAGGACCTCTAATC+CGG 0.461846 3.2:-81115809 MS.gene40955:intron
TTCATACACAGAATCTTTGT+GGG 0.463075 3.2:-81115528 MS.gene40955:CDS
TGGGAGCTTGATGGGGAAGC+TGG 0.464916 3.2:-81118518 MS.gene40955:CDS
ATCCCAAGCTATATTCCAAA+AGG 0.465411 3.2:-81115560 MS.gene40955:CDS
TGCTAATGGTGATGTGTATG+AGG 0.466007 3.2:-81118834 MS.gene40955:CDS
GTCCTTGTTATTCGATCGAT+GGG 0.468826 3.2:-81118376 MS.gene40955:CDS
GCGGAGAGAGTGTGTAAAGC+TGG 0.469147 3.2:-81115762 MS.gene40955:CDS
GAAGAGTGCATACCGGCCTA+TGG 0.469968 3.2:+81116784 None:intergenic
GCCGTGTTCGCGGTGGTCGA+CGG 0.472053 3.2:+81119164 None:intergenic
GGTGAGAAATGTTATGCTAA+TGG 0.475438 3.2:-81118848 MS.gene40955:CDS
TTGAGGGAAATGTCTTCTCC+TGG 0.476508 3.2:-81117819 MS.gene40955:CDS
GAATCGTTATGTGGGTTGTT+GGG 0.476688 3.2:-81118687 MS.gene40955:CDS
GAGATTGGTGGTGTTGGTGT+TGG 0.478650 3.2:-81118428 MS.gene40955:CDS
CAAATCGGTCATCTTGAGTA+AGG 0.481065 3.2:+81117775 None:intergenic
GGGAGGTATATGTGGAGGAA+TGG 0.483176 3.2:-81118779 MS.gene40955:CDS
GTTTCTGTGAGTGTGGATGA+TGG 0.484895 3.2:-81118575 MS.gene40955:CDS
CAAACCTATTGGAGGCCAAA+AGG 0.485887 3.2:-81117466 MS.gene40955:intron
GGTGACACGCGCCGTGTTCG+CGG 0.487367 3.2:+81119154 None:intergenic
CTTGAAACCAAGACTGCTCC+AGG 0.487985 3.2:+81117187 None:intergenic
GGAGGTGCAATTTGCAAGAT+GGG 0.490169 3.2:-81118805 MS.gene40955:CDS
GAAGAATGGGAATCGTTATG+TGG 0.493445 3.2:-81118696 MS.gene40955:CDS
TTGATGGGGAGGCGTAAACT+TGG 0.495578 3.2:+81118071 None:intergenic
GGAATATAGCTTGGGATCAA+CGG 0.495725 3.2:+81115566 None:intergenic
GAGAGTGTGTAAAGCTGGAT+TGG 0.495931 3.2:-81115757 MS.gene40955:CDS
GACCATGAGATGAACCTTTG+AGG 0.496961 3.2:+81117286 None:intergenic
CAGAGGACCTCTAATCCGGC+TGG 0.499620 3.2:-81115805 MS.gene40955:CDS
TCAACGGCTGAGATGGATGT+GGG 0.500864 3.2:+81115582 None:intergenic
TGCAATTTGCAAGATGGGGA+AGG 0.504770 3.2:-81118800 MS.gene40955:CDS
TGTATACGTCGCCGTTTGGA+AGG 0.506660 3.2:+81119113 None:intergenic
TTGTGTTGGGAAGCATGCTT+CGG 0.507813 3.2:-81118166 MS.gene40955:CDS
TAGTCTCATCAATATCCTTA+CGG 0.513121 3.2:+81117247 None:intergenic
ATGTGTATGAGGGATGGTGG+AGG 0.519472 3.2:-81118823 MS.gene40955:CDS
GACCTCAAAGGTTCATCTCA+TGG 0.520619 3.2:-81117288 MS.gene40955:CDS
CATAAGCGATTTGACCTCAA+AGG 0.521058 3.2:-81117300 MS.gene40955:CDS
TGGGTTTCTGATAGGAAACA+TGG 0.521152 3.2:-81118875 MS.gene40955:CDS
TGTGGTGCTATATGTGGTAA+TGG 0.522855 3.2:-81118731 MS.gene40955:CDS
GTGCCTCGAGAGCTTAGATC+AGG 0.523004 3.2:-81118144 MS.gene40955:CDS
CAAAGGAGAAATTCTGGACA+AGG 0.526565 3.2:-81118110 MS.gene40955:CDS
ATCAACGGCTGAGATGGATG+TGG 0.528438 3.2:+81115581 None:intergenic
AGTAATCATCACGAAAATGA+AGG 0.531530 3.2:+81116995 None:intergenic
TACCAAGGAGAATGGAAGAA+AGG 0.532077 3.2:-81119025 MS.gene40955:CDS
AAAAGTTCCAGAACCTTCCA+TGG 0.533472 3.2:+81118931 None:intergenic
GGTGTTGGTGATGTAGGGTA+TGG 0.535016 3.2:-81118413 MS.gene40955:CDS
GATGCATGTACCAAGGAGAA+TGG 0.535617 3.2:-81119033 MS.gene40955:CDS
TTGTGGCAATGATACATTGA+GGG 0.539553 3.2:-81117835 MS.gene40955:CDS
AGTCCTTGTTATTCGATCGA+TGG 0.540552 3.2:-81118377 MS.gene40955:CDS
TTGTGATATTGTTGATAATG+TGG 0.540603 3.2:-81118486 MS.gene40955:CDS
TGCATACAAGTCACTACAAG+TGG 0.541017 3.2:-81115607 MS.gene40955:CDS
TATTTCCACCTGAACACCAC+GGG 0.543557 3.2:+81118018 None:intergenic
GTGTGTTTACGTGGCGTGAT+GGG 0.545765 3.2:-81118640 MS.gene40955:CDS
CCATCAGGAGCTACTTATGA+AGG 0.545903 3.2:-81118971 MS.gene40955:CDS
GAAAGGCAAAACTAAGATCA+AGG 0.546651 3.2:+81117211 None:intergenic
GCCGTCGACCACCGCGAACA+CGG 0.548092 3.2:-81119165 MS.gene40955:CDS
TGGAGGTGCAATTTGCAAGA+TGG 0.548301 3.2:-81118806 MS.gene40955:CDS
GTTCGCGGTGGTCGACGGCA+TGG 0.548954 3.2:+81119169 None:intergenic
GTGATGTGTATGAGGGATGG+TGG 0.550040 3.2:-81118826 MS.gene40955:CDS
TGGACAAGGTTTCCTCCAGA+AGG 0.550122 3.2:-81118096 MS.gene40955:CDS
CTTGAAGAAGTCTGAAGTCA+AGG 0.551924 3.2:-81117742 MS.gene40955:intron
GGAATGAGTATGTTGGTGAA+TGG 0.558164 3.2:-81118757 MS.gene40955:CDS
ATTGCCCATTACAATAAATC+GGG 0.558443 3.2:+81117347 None:intergenic
AGCTCCCAAATACAAATCCT+AGG 0.558462 3.2:+81118533 None:intergenic
AATGGAAGAAAGGTAAAGCA+TGG 0.560447 3.2:-81119015 MS.gene40955:CDS
CCAAGACTGCTCCAGGCGAA+AGG 0.561092 3.2:+81117194 None:intergenic
ATAGCAAGCATGTAATCGGC+AGG 0.561196 3.2:+81117858 None:intergenic
TTTATTTCAGGGTCCATGGA+AGG 0.561312 3.2:-81118944 MS.gene40955:CDS
CTGGCATGTTAATTCCCAGC+CGG 0.561746 3.2:+81115790 None:intergenic
ACGGCAAAGGTAAATACGTA+TGG 0.563043 3.2:-81119063 MS.gene40955:CDS
ATCTCACCGCTACTCTCTGA+AGG 0.563905 3.2:+81115702 None:intergenic
TTGTATTTGGGAGCTTGATG+GGG 0.567064 3.2:-81118525 MS.gene40955:CDS
GTTTACGCCTCCCCATCAAT+CGG 0.568425 3.2:-81118067 MS.gene40955:CDS
GGTGTGTTTACGTGGCGTGA+TGG 0.569414 3.2:-81118641 MS.gene40955:CDS
TCGTTGGTTACGAAATTCCT+GGG 0.571328 3.2:-81117501 MS.gene40955:CDS
GCAATTTGCAAGATGGGGAA+GGG 0.571866 3.2:-81118799 MS.gene40955:CDS
GGGAGAATGGTGTGCCGAAA+GGG 0.571892 3.2:-81118667 MS.gene40955:CDS
AAGAGTGCATACCGGCCTAT+GGG 0.572174 3.2:+81116785 None:intergenic
CCCTTACAAACAGTATAACC+CGG 0.573249 3.2:+81118341 None:intergenic
ATGACACTCAGGACACGAGA+TGG 0.576124 3.2:-81116811 MS.gene40955:CDS
CTGTGAGTTCCTGGAAGCAG+AGG 0.577302 3.2:-81117046 MS.gene40955:CDS
AATGGTGTGCCGAAAGGGAA+AGG 0.577935 3.2:-81118662 MS.gene40955:CDS
CATTGTGTCAAACCTATTGG+AGG 0.578059 3.2:-81117474 MS.gene40955:CDS
GGGGAATGATGCCAAGAAGA+GGG 0.579761 3.2:-81118597 MS.gene40955:CDS
ATGGAAGAAAGGTAAAGCAT+GGG 0.583487 3.2:-81119014 MS.gene40955:CDS
GGATGATGGTTCTAAGAGTG+TGG 0.588270 3.2:-81118561 MS.gene40955:CDS
AATTAACATGCCAGCAAGAG+CGG 0.589839 3.2:-81115781 MS.gene40955:CDS
GGTAAATACGTATGGAACGA+TGG 0.590153 3.2:-81119055 MS.gene40955:CDS
GACAACCGATAAACTCCGTA+AGG 0.596237 3.2:-81117262 MS.gene40955:CDS
CCGGGTTATACTGTTTGTAA+GGG 0.599766 3.2:-81118341 MS.gene40955:CDS
AGAGGACCTCTAATCCGGCT+GGG 0.601886 3.2:-81115804 MS.gene40955:CDS
GAATCAGAGATTGGTGGTGT+TGG 0.602478 3.2:-81118434 MS.gene40955:CDS
TTCTCAGTACAAGAACTCGT+TGG 0.608088 3.2:-81117517 MS.gene40955:CDS
CGAGATGGATACCCATAGGC+CGG 0.610897 3.2:-81116796 MS.gene40955:intron
ATGGTGATGTGTATGAGGGA+TGG 0.612140 3.2:-81118829 MS.gene40955:CDS
AGTGTTTCATCAGGGAATTG+GGG 0.612643 3.2:-81118617 MS.gene40955:CDS
TGGAAGAAAGGTAAAGCATG+GGG 0.615750 3.2:-81119013 MS.gene40955:CDS
AAATCCACCGATTGATGGGG+AGG 0.615911 3.2:+81118060 None:intergenic
TGGAAATGTGGTGCTATATG+TGG 0.618355 3.2:-81118737 MS.gene40955:CDS
TCTCACCGCTACTCTCTGAA+GGG 0.618386 3.2:+81115703 None:intergenic
TCATACACAGAATCTTTGTG+GGG 0.619193 3.2:-81115527 MS.gene40955:CDS
GGGTTTCTGATAGGAAACAT+GGG 0.619609 3.2:-81118874 MS.gene40955:CDS
CCTTCATAAGTAGCTCCTGA+TGG 0.620490 3.2:+81118971 None:intergenic
AAGGGAAAGGTGTGTTTACG+TGG 0.620553 3.2:-81118649 MS.gene40955:CDS
TGTGAGTTCCTGGAAGCAGA+GGG 0.621723 3.2:-81117045 MS.gene40955:CDS
GGGAAGGGAGGTATATGTGG+AGG 0.626837 3.2:-81118784 MS.gene40955:CDS
TCAAAGGTTCATCTCATGGT+CGG 0.627326 3.2:-81117284 MS.gene40955:CDS
TCTCCTGATCTAAGCTCTCG+AGG 0.629245 3.2:+81118141 None:intergenic
GCTAATGGTGATGTGTATGA+GGG 0.630315 3.2:-81118833 MS.gene40955:CDS
GAAGAGGGTTTCTGTGAGTG+TGG 0.631349 3.2:-81118582 MS.gene40955:CDS
ACGTATTTACCTTTGCCGTG+TGG 0.632527 3.2:+81119067 None:intergenic
TGGGAGAATGGTGTGCCGAA+AGG 0.634731 3.2:-81118668 MS.gene40955:CDS
GTGTTTCATCAGGGAATTGG+GGG 0.636387 3.2:-81118616 MS.gene40955:CDS
AAGAATGGGAATCGTTATGT+GGG 0.637878 3.2:-81118695 MS.gene40955:CDS
GACACGAGATGGATACCCAT+AGG 0.639932 3.2:-81116800 MS.gene40955:CDS
TTTGTGGCAATGATACATTG+AGG 0.640401 3.2:-81117836 MS.gene40955:CDS
GTTTGACACAATGAACTCCC+AGG 0.642986 3.2:+81117484 None:intergenic
AGGAATGGGAATGAGTATGT+TGG 0.643494 3.2:-81118764 MS.gene40955:CDS
TACGCCTCCCCATCAATCGG+TGG 0.646074 3.2:-81118064 MS.gene40955:CDS
ATTTGCAAGATGGGGAAGGG+AGG 0.650775 3.2:-81118796 MS.gene40955:CDS
TATGTTGGTGAATGGAAATG+TGG 0.655881 3.2:-81118749 MS.gene40955:CDS
CCAAACGGCGACGTATACAG+TGG 0.660988 3.2:-81119109 MS.gene40955:CDS
CTAAAATCCACCGATTGATG+GGG 0.661133 3.2:+81118057 None:intergenic
GATGGGGATGTTAAGAAACC+GGG 0.661758 3.2:-81118359 MS.gene40955:CDS
CATGCAAAATGATGACACTC+AGG 0.664084 3.2:-81116822 MS.gene40955:CDS
GGAAACACACCACACGGCAA+AGG 0.664480 3.2:-81119076 MS.gene40955:CDS
CATACACAGAATCTTTGTGG+GGG 0.665314 3.2:-81115526 MS.gene40955:CDS
GACACGCGCCGTGTTCGCGG+TGG 0.667971 3.2:+81119157 None:intergenic
GTAAACTTGGAACCTTCTGG+AGG 0.668383 3.2:+81118084 None:intergenic
TTATTTCCACCTGAACACCA+CGG 0.668462 3.2:+81118017 None:intergenic
TTATCAGGAAACACACCACA+CGG 0.669927 3.2:-81119082 MS.gene40955:CDS
GAAACATGTTGATAGTAACT+GGG 0.673484 3.2:+81117537 None:intergenic
GTGATGGGAGTGTTTCATCA+GGG 0.673719 3.2:-81118625 MS.gene40955:CDS
AACGATGGATGCATGTACCA+AGG 0.678792 3.2:-81119040 MS.gene40955:CDS
GAGGTGCAATTTGCAAGATG+GGG 0.686193 3.2:-81118804 MS.gene40955:CDS
GGAAGAAAGGTAAAGCATGG+GGG 0.686830 3.2:-81119012 MS.gene40955:CDS
CTCACCGCTACTCTCTGAAG+GGG 0.694466 3.2:+81115704 None:intergenic
ATGGAAAGACTACTGTCCCG+TGG 0.696500 3.2:-81118034 MS.gene40955:CDS
CAACGGCTGAGATGGATGTG+GGG 0.698303 3.2:+81115583 None:intergenic
TCTACCCCTTCAGAGAGTAG+CGG 0.711188 3.2:-81115708 MS.gene40955:CDS
GGAAGTGAATCAGAGATTGG+TGG 0.714127 3.2:-81118440 MS.gene40955:CDS
TCCCCATCGATCGAATAACA+AGG 0.724583 3.2:+81118374 None:intergenic
TCCTTGTTATTCGATCGATG+GGG 0.734954 3.2:-81118375 MS.gene40955:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTTTATAATTTCACA+AGG + chr3.2:81118076-81118095 None:intergenic 10.0%
!! AAAAAAACTTACTATAACAT+TGG + chr3.2:81118638-81118657 None:intergenic 15.0%
!! AGAAACATTATTAACTATTT+CGG - chr3.2:81115523-81115542 MS.gene40955:CDS 15.0%
!! TAAAATGTAGCAATAAAAAA+TGG + chr3.2:81118283-81118302 None:intergenic 15.0%
!! TATGAAAAGATTATTCATTT+AGG - chr3.2:81118301-81118320 MS.gene40955:CDS 15.0%
!!! TATTAATGATGTTTGTATTT+TGG - chr3.2:81116840-81116859 MS.gene40955:intron 15.0%
!! AGAACAAATCAATAAATGAT+GGG + chr3.2:81118215-81118234 None:intergenic 20.0%
!! TAGAACAAATCAATAAATGA+TGG + chr3.2:81118216-81118235 None:intergenic 20.0%
!! TATTAAATATCTGCATAGTT+AGG + chr3.2:81118929-81118948 None:intergenic 20.0%
!! TCAAGTCTAGTAATTAATTA+AGG + chr3.2:81117085-81117104 None:intergenic 20.0%
!! TGTCAATATTTATATGTAAC+TGG + chr3.2:81118787-81118806 None:intergenic 20.0%
!! TTGATTCTTAATCTTCAATT+GGG - chr3.2:81116481-81116500 MS.gene40955:intron 20.0%
!! TTTGATTCTTAATCTTCAAT+TGG - chr3.2:81116480-81116499 MS.gene40955:intron 20.0%
!!! TTGGTTTATTTTTATGTGTT+TGG - chr3.2:81116554-81116573 MS.gene40955:intron 20.0%
!!! TTTGTTTTAGATATTGTGTT+GGG - chr3.2:81116604-81116623 MS.gene40955:intron 20.0%
!!! TTTTGCTAATATCATAATCT+TGG + chr3.2:81119146-81119165 None:intergenic 20.0%
!!! TTTTGTTTTAGATATTGTGT+TGG - chr3.2:81116603-81116622 MS.gene40955:intron 20.0%
! AATGAATACTTGTATTGCTA+TGG - chr3.2:81117404-81117423 MS.gene40955:intron 25.0%
! ACAACAAAAACAATCAGATA+CGG + chr3.2:81118034-81118053 None:intergenic 25.0%
! GACTAAATATGGAAAATTCA+AGG + chr3.2:81118115-81118134 None:intergenic 25.0%
! TAAAAGTAAAAGAAATGACC+CGG + chr3.2:81118359-81118378 None:intergenic 25.0%
! TAGAAATCAAAGTCACTTAT+GGG - chr3.2:81118234-81118253 MS.gene40955:intron 25.0%
! TATAAAACCTATATTGAGCA+AGG - chr3.2:81117131-81117150 MS.gene40955:intron 25.0%
! TCTAGTAATTAATTAAGGCT+AGG + chr3.2:81117080-81117099 None:intergenic 25.0%
! TGATACTTATAAAGGTTCTT+GGG - chr3.2:81115889-81115908 MS.gene40955:intron 25.0%
! TGTTATCTACATTGTTAGTT+TGG - chr3.2:81116523-81116542 MS.gene40955:intron 25.0%
! TTAAAAGATTTGTGGGATTA+TGG - chr3.2:81117919-81117938 MS.gene40955:intron 25.0%
! TTAATCTTCAATTGGGTATT+AGG - chr3.2:81116488-81116507 MS.gene40955:intron 25.0%
! TTCAGTGCAAAATTTAAACT+AGG + chr3.2:81117352-81117371 None:intergenic 25.0%
!! TTTTATGATGTTCTTAGAGT+TGG - chr3.2:81117675-81117694 MS.gene40955:intron 25.0%
!! TTTTCCTAGGATTTGTATTT+GGG - chr3.2:81116246-81116265 MS.gene40955:intron 25.0%
!! TTTTCTTTGCATTTGTGTTT+TGG + chr3.2:81115559-81115578 None:intergenic 25.0%
!! TTTTGCTTCTATTTGCATTA+TGG + chr3.2:81118423-81118442 None:intergenic 25.0%
!! TTTTGTAATGATTTTTGCTC+AGG - chr3.2:81117700-81117719 MS.gene40955:intron 25.0%
!! TTTTTCCTAGGATTTGTATT+TGG - chr3.2:81116245-81116264 MS.gene40955:intron 25.0%
!!! AATGATGTTTGTATTTTGGT+GGG - chr3.2:81116844-81116863 MS.gene40955:intron 25.0%
!!! ATGAAGGTGATTTTATTTCA+GGG - chr3.2:81115828-81115847 MS.gene40955:intron 25.0%
!!! GTGTTTTAATTTGGAAGAAT+GGG - chr3.2:81116074-81116093 MS.gene40955:intron 25.0%
!!! TAATGATGTTTGTATTTTGG+TGG - chr3.2:81116843-81116862 MS.gene40955:intron 25.0%
!!! TATGAAGGTGATTTTATTTC+AGG - chr3.2:81115827-81115846 MS.gene40955:intron 25.0%
!!! TCAAGGTTTTGATTACAAAT+CGG + chr3.2:81117026-81117045 None:intergenic 25.0%
!!! TCTGATGTAATCCTTTATTT+TGG - chr3.2:81119105-81119124 MS.gene40955:CDS 25.0%
!!! TTGTGATATTGTTGATAATG+TGG - chr3.2:81116297-81116316 MS.gene40955:intron 25.0%
AATATCCTTACGGAGTTTAT+CGG + chr3.2:81117529-81117548 None:intergenic 30.0%
AATTCACATGAAAGGAAACA+TGG + chr3.2:81117884-81117903 None:intergenic 30.0%
AATTTCACCTTGCTCAATAT+AGG + chr3.2:81117141-81117160 None:intergenic 30.0%
ACAAATAGCAAGCATGTAAT+CGG + chr3.2:81116932-81116951 None:intergenic 30.0%
AGCTATATTCCAAAAGGTTT+AGG - chr3.2:81119229-81119248 MS.gene40955:CDS 30.0%
AGTAATCATCACGAAAATGA+AGG + chr3.2:81117791-81117810 None:intergenic 30.0%
AGTGAAAGAAACTTTACACA+AGG + chr3.2:81117647-81117666 None:intergenic 30.0%
ATCCTCAAAACTTATCTCTT+TGG + chr3.2:81118138-81118157 None:intergenic 30.0%
ATTGCCCATTACAATAAATC+GGG + chr3.2:81117439-81117458 None:intergenic 30.0%
CAATGATATTGATAGAGCAA+TGG - chr3.2:81118721-81118740 MS.gene40955:CDS 30.0%
CATTGCCCATTACAATAAAT+CGG + chr3.2:81117440-81117459 None:intergenic 30.0%
CTAGAAATCAAAGTCACTTA+TGG - chr3.2:81118233-81118252 MS.gene40955:intron 30.0%
GCTATATTCCAAAAGGTTTA+GGG - chr3.2:81119230-81119249 MS.gene40955:CDS 30.0%
GTGATACTTATAAAGGTTCT+TGG - chr3.2:81115888-81115907 MS.gene40955:intron 30.0%
TAGTCTCATCAATATCCTTA+CGG + chr3.2:81117539-81117558 None:intergenic 30.0%
TATGATTCTTGATATACCAG+AGG - chr3.2:81118961-81118980 MS.gene40955:CDS 30.0%
TCCTCAAAACTTATCTCTTT+GGG + chr3.2:81118137-81118156 None:intergenic 30.0%
TGTCAATGATGCCAAAATAA+AGG + chr3.2:81119119-81119138 None:intergenic 30.0%
TGTTTCTTTGTTGGGTATTT+AGG - chr3.2:81116875-81116894 MS.gene40955:intron 30.0%
TTCATACACAGAATCTTTGT+GGG - chr3.2:81119255-81119274 MS.gene40955:CDS 30.0%
TTTAGTAATCCGTTTCTCTT+GGG - chr3.2:81118878-81118897 MS.gene40955:CDS 30.0%
TTTCATACACAGAATCTTTG+TGG - chr3.2:81119254-81119273 MS.gene40955:CDS 30.0%
! AAATCTTTTAACCCTTGGAT+CGG + chr3.2:81117910-81117929 None:intergenic 30.0%
! AACAAATAGCTTTACAGAGA+AGG + chr3.2:81118695-81118714 None:intergenic 30.0%
! CTACATTGTTAGTTTGGATT+TGG - chr3.2:81116529-81116548 MS.gene40955:intron 30.0%
! GCTTGTATGTTTTATAGAGA+TGG - chr3.2:81116322-81116341 MS.gene40955:intron 30.0%
! TATGAAATCCCTAAACCTTT+TGG + chr3.2:81119241-81119260 None:intergenic 30.0%
! TATTTCTACATGACTAGTAG+TGG + chr3.2:81118509-81118528 None:intergenic 30.0%
! TGGCGTTTTTAATAAGATTG+TGG - chr3.2:81116574-81116593 MS.gene40955:intron 30.0%
! TGGTTGTTTGTTTCTTTGTT+GGG - chr3.2:81116867-81116886 MS.gene40955:intron 30.0%
! TGTTAGTTTGGATTTGGATT+TGG - chr3.2:81116535-81116554 MS.gene40955:intron 30.0%
! TTTTAGTAATCCGTTTCTCT+TGG - chr3.2:81118877-81118896 MS.gene40955:CDS 30.0%
! TTTTCGTGATGATTACTCAT+CGG - chr3.2:81117794-81117813 MS.gene40955:CDS 30.0%
!! AGAAACATGTTGATAGTAAC+TGG + chr3.2:81117250-81117269 None:intergenic 30.0%
!! CAAATCAATAAATGATGGGT+TGG + chr3.2:81118211-81118230 None:intergenic 30.0%
!! GAAACATGTTGATAGTAACT+GGG + chr3.2:81117249-81117268 None:intergenic 30.0%
!! TATCTCTTTGGGACTAAATA+TGG + chr3.2:81118126-81118145 None:intergenic 30.0%
!! TTTTGAGGATTTAGAAATGC+TGG - chr3.2:81118148-81118167 MS.gene40955:CDS 30.0%
!!! AAACCTTTTGGAATATAGCT+TGG + chr3.2:81119229-81119248 None:intergenic 30.0%
!!! AACCTTTTGGAATATAGCTT+GGG + chr3.2:81119228-81119247 None:intergenic 30.0%
!!! GGTGTTTTAATTTGGAAGAA+TGG - chr3.2:81116073-81116092 MS.gene40955:intron 30.0%
!!! GTGGTAATGGTGTTTTAATT+TGG - chr3.2:81116065-81116084 MS.gene40955:intron 30.0%
!!! GTTTTTTTGACAACAAATGC+TGG - chr3.2:81118650-81118669 MS.gene40955:CDS 30.0%
!!! TTGTTTTTGTTGTTTCAGCT+TGG - chr3.2:81118041-81118060 MS.gene40955:CDS 30.0%
AAGAATGGGAATCGTTATGT+GGG - chr3.2:81116088-81116107 MS.gene40955:intron 35.0%
AATGGAAGAAAGGTAAAGCA+TGG - chr3.2:81115768-81115787 MS.gene40955:CDS 35.0%
ACAGACCCGATTTATTGTAA+TGG - chr3.2:81117431-81117450 MS.gene40955:intron 35.0%
ATACCAGAACACAACTCATT+AGG + chr3.2:81117837-81117856 None:intergenic 35.0%
ATCCCAAGCTATATTCCAAA+AGG - chr3.2:81119223-81119242 MS.gene40955:CDS 35.0%
ATCGGACAAATTCACATGAA+AGG + chr3.2:81117892-81117911 None:intergenic 35.0%
ATGAAAGGAAACATGGAACT+AGG + chr3.2:81117877-81117896 None:intergenic 35.0%
ATGGAAGAAAGGTAAAGCAT+GGG - chr3.2:81115769-81115788 MS.gene40955:CDS 35.0%
ATTTGTATTTGGGAGCTTGA+TGG - chr3.2:81116256-81116275 MS.gene40955:intron 35.0%
CACAAATGCAAAGAAAAACG+AGG - chr3.2:81115562-81115581 MS.gene40955:CDS 35.0%
CACTTCTAAATCACAGATAG+AGG + chr3.2:81118564-81118583 None:intergenic 35.0%
CAGACCCGATTTATTGTAAT+GGG - chr3.2:81117432-81117451 MS.gene40955:intron 35.0%
CATGACAAATCAAGTCATTG+TGG + chr3.2:81118614-81118633 None:intergenic 35.0%
CCAACTAATCATTGAAACAG+AGG + chr3.2:81117196-81117215 None:intergenic 35.0%
CCAAGGGTTAAAAGATTTGT+GGG - chr3.2:81117912-81117931 MS.gene40955:intron 35.0%
CCTCTGTTTCAATGATTAGT+TGG - chr3.2:81117193-81117212 MS.gene40955:CDS 35.0%
CTTGGTTTCAAGAGCTAAAA+TGG - chr3.2:81117607-81117626 MS.gene40955:intron 35.0%
GAAAGGCAAAACTAAGATCA+AGG + chr3.2:81117575-81117594 None:intergenic 35.0%
GGTGAGAAATGTTATGCTAA+TGG - chr3.2:81115935-81115954 MS.gene40955:intron 35.0%
GTAGAAAAACACCTTCCAAA+CGG - chr3.2:81115659-81115678 MS.gene40955:CDS 35.0%
GTATACAGTGGAAGTTTATC+AGG - chr3.2:81115686-81115705 MS.gene40955:CDS 35.0%
GTCATGTAGAAATAAAGCAG+TGG - chr3.2:81118515-81118534 MS.gene40955:CDS 35.0%
GTGGAAGGTGATACTTATAA+AGG - chr3.2:81115881-81115900 MS.gene40955:intron 35.0%
GTTCATTGTGTCAAACCTAT+TGG - chr3.2:81117306-81117325 MS.gene40955:CDS 35.0%
TAGACTAAAGCTCAAGAACA+TGG + chr3.2:81118390-81118409 None:intergenic 35.0%
TCATACACAGAATCTTTGTG+GGG - chr3.2:81119256-81119275 MS.gene40955:CDS 35.0%
TCCAAGGGTTAAAAGATTTG+TGG - chr3.2:81117911-81117930 MS.gene40955:intron 35.0%
TGATATTGATAGAGCAATGG+TGG - chr3.2:81118724-81118743 MS.gene40955:CDS 35.0%
TGCAAAGAAAAACGAGGAAA+TGG - chr3.2:81115568-81115587 MS.gene40955:CDS 35.0%
TGCTTCTATTTGCATTATGG+CGG + chr3.2:81118420-81118439 None:intergenic 35.0%
TTATGGGAATGTGGATTCAT+GGG - chr3.2:81118250-81118269 MS.gene40955:intron 35.0%
TTGATCCAAAGGAGAAATTC+TGG - chr3.2:81116667-81116686 MS.gene40955:intron 35.0%
TTGGGTATTTAGGCATTTGA+GGG - chr3.2:81116885-81116904 MS.gene40955:intron 35.0%
TTGTGGCAATGATACATTGA+GGG - chr3.2:81116948-81116967 MS.gene40955:intron 35.0%
TTTGTATTTGGGAGCTTGAT+GGG - chr3.2:81116257-81116276 MS.gene40955:intron 35.0%
TTTGTGGCAATGATACATTG+AGG - chr3.2:81116947-81116966 MS.gene40955:intron 35.0%
! ATAAAGTGAAGAGTGCATAC+CGG + chr3.2:81118009-81118028 None:intergenic 35.0%
! ATCTAAAATCCACCGATTGA+TGG + chr3.2:81116731-81116750 None:intergenic 35.0%
! CTGTTTCAATGATTAGTTGG+TGG - chr3.2:81117196-81117215 MS.gene40955:CDS 35.0%
! GTGGTTGTTTGTTTCTTTGT+TGG - chr3.2:81116866-81116885 MS.gene40955:intron 35.0%
! TATGTTGGTGAATGGAAATG+TGG - chr3.2:81116034-81116053 MS.gene40955:intron 35.0%
! TCCCAAAGAGATAAGTTTTG+AGG - chr3.2:81118133-81118152 MS.gene40955:CDS 35.0%
! TCTAAAATCCACCGATTGAT+GGG + chr3.2:81116730-81116749 None:intergenic 35.0%
! TTCTTGAGCTTTAGTCTATC+TGG - chr3.2:81118392-81118411 MS.gene40955:CDS 35.0%
!! AATGGGCAATGTGTTTTGTT+CGG - chr3.2:81117449-81117468 MS.gene40955:intron 35.0%
!! ATCAATCGGTGGATTTTAGA+TGG - chr3.2:81116730-81116749 MS.gene40955:intron 35.0%
!! ATCAGGAGATTTTGATCCAA+AGG - chr3.2:81116656-81116675 MS.gene40955:intron 35.0%
!! ATGGACTACAGTTTTCTCAT+TGG - chr3.2:81117765-81117784 MS.gene40955:CDS 35.0%
!! CACAATGACTTGATTTGTCA+TGG - chr3.2:81118612-81118631 MS.gene40955:CDS 35.0%
!! GATTACATGCTTGCTATTTG+TGG - chr3.2:81116931-81116950 MS.gene40955:intron 35.0%
!! TCTTTGCATTTGTGTTTTGG+TGG + chr3.2:81115556-81115575 None:intergenic 35.0%
!! TGATTTTATTTCAGGGTCCA+TGG - chr3.2:81115835-81115854 MS.gene40955:intron 35.0%
!!! TTTGGAAGGTGTTTTTCTAC+TGG + chr3.2:81115659-81115678 None:intergenic 35.0%
AAAAGTTCCAGAACCTTCCA+TGG + chr3.2:81115855-81115874 None:intergenic 40.0%
AAAGGAAACATGGAACTAGG+AGG + chr3.2:81117874-81117893 None:intergenic 40.0%
AAGGTTCTTGGGTTTCTGAT+AGG - chr3.2:81115900-81115919 MS.gene40955:intron 40.0%
AAGTAAAAGAAATGACCCGG+TGG + chr3.2:81118356-81118375 None:intergenic 40.0%
AATTAACATGCCAGCAAGAG+CGG - chr3.2:81119002-81119021 MS.gene40955:CDS 40.0%
ACCGGGTTATACTGTTTGTA+AGG - chr3.2:81116441-81116460 MS.gene40955:intron 40.0%
ACGGCAAAGGTAAATACGTA+TGG - chr3.2:81115720-81115739 MS.gene40955:CDS 40.0%
AGCTCCCAAATACAAATCCT+AGG + chr3.2:81116253-81116272 None:intergenic 40.0%
AGGAATGGGAATGAGTATGT+TGG - chr3.2:81116019-81116038 MS.gene40955:intron 40.0%
AGGATTTAGAAATGCTGGTG+CGG - chr3.2:81118153-81118172 MS.gene40955:CDS 40.0%
AGTGTTTCATCAGGGAATTG+GGG - chr3.2:81116166-81116185 MS.gene40955:intron 40.0%
ATGTCTTCTCCTGGAAAAAG+TGG - chr3.2:81116973-81116992 MS.gene40955:CDS 40.0%
ATGTGAATTTGTCCGATCCA+AGG - chr3.2:81117895-81117914 MS.gene40955:intron 40.0%
ATTGATAGAGCAATGGTGGT+TGG - chr3.2:81118728-81118747 MS.gene40955:CDS 40.0%
CAAAGGAGAAATTCTGGACA+AGG - chr3.2:81116673-81116692 MS.gene40955:intron 40.0%
CAAAGTCACTTATGGGAATG+TGG - chr3.2:81118241-81118260 MS.gene40955:intron 40.0%
CAAATCGGTCATCTTGAGTA+AGG + chr3.2:81117011-81117030 None:intergenic 40.0%
CATAAGCGATTTGACCTCAA+AGG - chr3.2:81117483-81117502 MS.gene40955:CDS 40.0%
CATACACAGAATCTTTGTGG+GGG - chr3.2:81119257-81119276 MS.gene40955:CDS 40.0%
CATGCAAAATGATGACACTC+AGG - chr3.2:81117961-81117980 MS.gene40955:intron 40.0%
CATTGTGTCAAACCTATTGG+AGG - chr3.2:81117309-81117328 MS.gene40955:CDS 40.0%
CCACCCTAAACTAGCAATAT+TGG - chr3.2:81118448-81118467 MS.gene40955:CDS 40.0%
CCCTTACAAACAGTATAACC+CGG + chr3.2:81116445-81116464 None:intergenic 40.0%
CCGGGTTATACTGTTTGTAA+GGG - chr3.2:81116442-81116461 MS.gene40955:intron 40.0%
CTAAATCACAGATAGAGGAC+TGG + chr3.2:81118559-81118578 None:intergenic 40.0%
CTTATGGGAATGTGGATTCA+TGG - chr3.2:81118249-81118268 MS.gene40955:intron 40.0%
CTTGACTTCAGACTTCTTCA+AGG + chr3.2:81117043-81117062 None:intergenic 40.0%
CTTGTCCAGAATTTCTCCTT+TGG + chr3.2:81116675-81116694 None:intergenic 40.0%
GAAGAATGGGAATCGTTATG+TGG - chr3.2:81116087-81116106 MS.gene40955:intron 40.0%
GAGTGTTTCATCAGGGAATT+GGG - chr3.2:81116165-81116184 MS.gene40955:intron 40.0%
GATGGAAGTGAATCAGAGAT+TGG - chr3.2:81116340-81116359 MS.gene40955:intron 40.0%
GCTTCTATTTGCATTATGGC+GGG + chr3.2:81118419-81118438 None:intergenic 40.0%
GGAATATAGCTTGGGATCAA+CGG + chr3.2:81119220-81119239 None:intergenic 40.0%
GGGTTTCTGATAGGAAACAT+GGG - chr3.2:81115909-81115928 MS.gene40955:intron 40.0%
GGTAAATACGTATGGAACGA+TGG - chr3.2:81115728-81115747 MS.gene40955:CDS 40.0%
GTAAACACACCTTTCCCTTT+CGG + chr3.2:81116133-81116152 None:intergenic 40.0%
GTTGGGTATTTAGGCATTTG+AGG - chr3.2:81116884-81116903 MS.gene40955:intron 40.0%
TACCAAGGAGAATGGAAGAA+AGG - chr3.2:81115758-81115777 MS.gene40955:CDS 40.0%
TACCTTTCTTCCATTCTCCT+TGG + chr3.2:81115763-81115782 None:intergenic 40.0%
TCAAAGGTTCATCTCATGGT+CGG - chr3.2:81117499-81117518 MS.gene40955:CDS 40.0%
TCACCTAATGAGTTGTGTTC+TGG - chr3.2:81117831-81117850 MS.gene40955:CDS 40.0%
TCTGATAGGAAACATGGGTT+TGG - chr3.2:81115914-81115933 MS.gene40955:intron 40.0%
TGCATACAAGTCACTACAAG+TGG - chr3.2:81119176-81119195 MS.gene40955:CDS 40.0%
TGGAAGAAAGGTAAAGCATG+GGG - chr3.2:81115770-81115789 MS.gene40955:CDS 40.0%
TGGGTTTCTGATAGGAAACA+TGG - chr3.2:81115908-81115927 MS.gene40955:intron 40.0%
TGTGAATTTGTCCGATCCAA+GGG - chr3.2:81117896-81117915 MS.gene40955:intron 40.0%
TTATCAGGAAACACACCACA+CGG - chr3.2:81115701-81115720 MS.gene40955:CDS 40.0%
TTATTTCCACCTGAACACCA+CGG + chr3.2:81116769-81116788 None:intergenic 40.0%
TTCTCAGTACAAGAACTCGT+TGG - chr3.2:81117266-81117285 MS.gene40955:CDS 40.0%
TTGTATTTGGGAGCTTGATG+GGG - chr3.2:81116258-81116277 MS.gene40955:intron 40.0%
TTTATTTCAGGGTCCATGGA+AGG - chr3.2:81115839-81115858 MS.gene40955:intron 40.0%
TTTGACAACAAATGCTGGAG+TGG - chr3.2:81118655-81118674 MS.gene40955:CDS 40.0%
! ACTAGGTAGTCCATACCTTT+TGG + chr3.2:81117335-81117354 None:intergenic 40.0%
! CCAATATTGCTAGTTTAGGG+TGG + chr3.2:81118451-81118470 None:intergenic 40.0%
! CCCACAAATCTTTTAACCCT+TGG + chr3.2:81117915-81117934 None:intergenic 40.0%
! CTAAAATCCACCGATTGATG+GGG + chr3.2:81116729-81116748 None:intergenic 40.0%
! CTTGAAGAAGTCTGAAGTCA+AGG - chr3.2:81117041-81117060 MS.gene40955:CDS 40.0%
! GAATCGTTATGTGGGTTGTT+GGG - chr3.2:81116096-81116115 MS.gene40955:intron 40.0%
! GCTAATGGTGATGTGTATGA+GGG - chr3.2:81115950-81115969 MS.gene40955:intron 40.0%
! GGAATGAGTATGTTGGTGAA+TGG - chr3.2:81116026-81116045 MS.gene40955:intron 40.0%
! GGGCCAATATTGCTAGTTTA+GGG + chr3.2:81118454-81118473 None:intergenic 40.0%
! TATGCTCCTGTTTGTTGAGA+TGG - chr3.2:81118587-81118606 MS.gene40955:CDS 40.0%
! TCGTTGGTTACGAAATTCCT+GGG - chr3.2:81117282-81117301 MS.gene40955:CDS 40.0%
! TGCTAATGGTGATGTGTATG+AGG - chr3.2:81115949-81115968 MS.gene40955:intron 40.0%
! TGGGCCAATATTGCTAGTTT+AGG + chr3.2:81118455-81118474 None:intergenic 40.0%
! TGTGGGATTATGGTTTTTGC+AGG - chr3.2:81117929-81117948 MS.gene40955:intron 40.0%
!! AGTCCTTGTTATTCGATCGA+TGG - chr3.2:81116406-81116425 MS.gene40955:intron 40.0%
!! CTAAGAGTGTGGTTTTTCCT+AGG - chr3.2:81116233-81116252 MS.gene40955:intron 40.0%
!! GTCCTTGTTATTCGATCGAT+GGG - chr3.2:81116407-81116426 MS.gene40955:intron 40.0%
!! TCCTTGTTATTCGATCGATG+GGG - chr3.2:81116408-81116427 MS.gene40955:intron 40.0%
!! TGGAAATGTGGTGCTATATG+TGG - chr3.2:81116046-81116065 MS.gene40955:intron 40.0%
!! TGTGGTGCTATATGTGGTAA+TGG - chr3.2:81116052-81116071 MS.gene40955:intron 40.0%
!!! AAGAAGCTTCCACTTTTTCC+AGG + chr3.2:81116985-81117004 None:intergenic 40.0%
!!! GAAGGTTCTGGAACTTTTGT+TGG - chr3.2:81115857-81115876 MS.gene40955:intron 40.0%
!!! GATGTTTGTATTTTGGTGGG+TGG - chr3.2:81116847-81116866 MS.gene40955:intron 40.0%
!!! TTCTGGAACTTTTGTTGGTG+TGG - chr3.2:81115862-81115881 MS.gene40955:intron 40.0%
!!! TTGCATTTGTGTTTTGGTGG+TGG + chr3.2:81115553-81115572 None:intergenic 40.0%
AAAGGTAAAGCATGGGGGAA+AGG - chr3.2:81115776-81115795 MS.gene40955:CDS 45.0%
AACGATGGATGCATGTACCA+AGG - chr3.2:81115743-81115762 MS.gene40955:CDS 45.0%
AAGGTAAAGCATGGGGGAAA+GGG - chr3.2:81115777-81115796 MS.gene40955:CDS 45.0%
ACGTATTTACCTTTGCCGTG+TGG + chr3.2:81115719-81115738 None:intergenic 45.0%
ACTCACAGAAACCCTCTTCT+TGG + chr3.2:81116200-81116219 None:intergenic 45.0%
ATACCAGAGGACCTCTAATC+CGG - chr3.2:81118974-81118993 MS.gene40955:CDS 45.0%
ATAGAGCAATGGTGGTTGGT+AGG - chr3.2:81118732-81118751 MS.gene40955:CDS 45.0%
ATAGCAAGCATGTAATCGGC+AGG + chr3.2:81116928-81116947 None:intergenic 45.0%
CAAACCTATTGGAGGCCAAA+AGG - chr3.2:81117317-81117336 MS.gene40955:CDS 45.0%
CCATCAGGAGCTACTTATGA+AGG - chr3.2:81115812-81115831 MS.gene40955:intron 45.0%
CCTTCATAAGTAGCTCCTGA+TGG + chr3.2:81115815-81115834 None:intergenic 45.0%
CGATGGGGATGTTAAGAAAC+CGG - chr3.2:81116423-81116442 MS.gene40955:intron 45.0%
CTATTGGAGGCCAAAAGGTA+TGG - chr3.2:81117322-81117341 MS.gene40955:CDS 45.0%
GAAAGAGAGCCCAAGAGAAA+CGG + chr3.2:81118890-81118909 None:intergenic 45.0%
GAATGTGGATTCATGGGACA+TGG - chr3.2:81118256-81118275 MS.gene40955:intron 45.0%
GACAACCGATAAACTCCGTA+AGG - chr3.2:81117521-81117540 MS.gene40955:CDS 45.0%
GACCATGAGATGAACCTTTG+AGG + chr3.2:81117500-81117519 None:intergenic 45.0%
GACCTCAAAGGTTCATCTCA+TGG - chr3.2:81117495-81117514 MS.gene40955:CDS 45.0%
GAGGTGCAATTTGCAAGATG+GGG - chr3.2:81115979-81115998 MS.gene40955:intron 45.0%
GATGCATGTACCAAGGAGAA+TGG - chr3.2:81115750-81115769 MS.gene40955:CDS 45.0%
GATGGGGATGTTAAGAAACC+GGG - chr3.2:81116424-81116443 MS.gene40955:intron 45.0%
GCAATTTGCAAGATGGGGAA+GGG - chr3.2:81115984-81116003 MS.gene40955:intron 45.0%
GGAAGAAAGGTAAAGCATGG+GGG - chr3.2:81115771-81115790 MS.gene40955:CDS 45.0%
GGAAGTGAATCAGAGATTGG+TGG - chr3.2:81116343-81116362 MS.gene40955:intron 45.0%
GTAAACTTGGAACCTTCTGG+AGG + chr3.2:81116702-81116721 None:intergenic 45.0%
GTGTTTCATCAGGGAATTGG+GGG - chr3.2:81116167-81116186 MS.gene40955:intron 45.0%
GTTTCTGTGAGTGTGGATGA+TGG - chr3.2:81116208-81116227 MS.gene40955:intron 45.0%
GTTTGACACAATGAACTCCC+AGG + chr3.2:81117302-81117321 None:intergenic 45.0%
TATTTCCACCTGAACACCAC+GGG + chr3.2:81116768-81116787 None:intergenic 45.0%
TCCCCATCGATCGAATAACA+AGG + chr3.2:81116412-81116431 None:intergenic 45.0%
TCTCTTCTGCTTTCATCCAC+CGG - chr3.2:81118337-81118356 MS.gene40955:CDS 45.0%
TGATAGAGACTGTGAGTTCC+TGG - chr3.2:81117728-81117747 MS.gene40955:intron 45.0%
TGCAATTTGCAAGATGGGGA+AGG - chr3.2:81115983-81116002 MS.gene40955:intron 45.0%
TGTGGTCCATCTCAACAAAC+AGG + chr3.2:81118596-81118615 None:intergenic 45.0%
TTGAGGGAAATGTCTTCTCC+TGG - chr3.2:81116964-81116983 MS.gene40955:CDS 45.0%
! AAGGGAAAGGTGTGTTTACG+TGG - chr3.2:81116134-81116153 MS.gene40955:intron 45.0%
! AGGTGTTTTTCTACTGGCGT+CGG + chr3.2:81115653-81115672 None:intergenic 45.0%
! ATGGTGATGTGTATGAGGGA+TGG - chr3.2:81115954-81115973 MS.gene40955:intron 45.0%
! CATACCTTTTGGCCTCCAAT+AGG + chr3.2:81117324-81117343 None:intergenic 45.0%
! CTCGTTGGTTACGAAATTCC+TGG - chr3.2:81117281-81117300 MS.gene40955:CDS 45.0%
! GAGAGTGTGTAAAGCTGGAT+TGG - chr3.2:81119026-81119045 MS.gene40955:CDS 45.0%
! GGAACTTTTGTTGGTGTGGA+AGG - chr3.2:81115866-81115885 MS.gene40955:intron 45.0%
! GGAATCGTTATGTGGGTTGT+TGG - chr3.2:81116095-81116114 MS.gene40955:intron 45.0%
! GGAGGTATATGTGGAGGAAT+GGG - chr3.2:81116005-81116024 MS.gene40955:intron 45.0%
! GGAGGTGCAATTTGCAAGAT+GGG - chr3.2:81115978-81115997 MS.gene40955:intron 45.0%
! GGAGTGTTTCATCAGGGAAT+TGG - chr3.2:81116164-81116183 MS.gene40955:intron 45.0%
! TATGTGGGTTGTTGGGAGAA+TGG - chr3.2:81116103-81116122 MS.gene40955:intron 45.0%
! TGGAGGTGCAATTTGCAAGA+TGG - chr3.2:81115977-81115996 MS.gene40955:intron 45.0%
! TTAATTCCCAGCCGGATTAG+AGG + chr3.2:81118988-81119007 None:intergenic 45.0%
! TTGTGTTGGGAAGCATGCTT+CGG - chr3.2:81116617-81116636 MS.gene40955:intron 45.0%
! TTTGCTACTTGCATGCGCAT+GGG + chr3.2:81118474-81118493 None:intergenic 45.0%
!! GAATCAGAGATTGGTGGTGT+TGG - chr3.2:81116349-81116368 MS.gene40955:intron 45.0%
!! GGATGATGGTTCTAAGAGTG+TGG - chr3.2:81116222-81116241 MS.gene40955:intron 45.0%
!! GTGATGGGAGTGTTTCATCA+GGG - chr3.2:81116158-81116177 MS.gene40955:intron 45.0%
!! GTGTTGGTGTTGGTGATGTA+GGG - chr3.2:81116365-81116384 MS.gene40955:intron 45.0%
!!! TCTTAGTTTTGCCTTTCGCC+TGG - chr3.2:81117578-81117597 MS.gene40955:intron 45.0%
AATGGTGTGCCGAAAGGGAA+AGG - chr3.2:81116121-81116140 MS.gene40955:intron 50.0%
ATCAACGGCTGAGATGGATG+TGG + chr3.2:81119205-81119224 None:intergenic 50.0%
ATCCTGATGAGCACCTGACA+TGG + chr3.2:81117222-81117241 None:intergenic 50.0%
ATCTCACCGCTACTCTCTGA+AGG + chr3.2:81119084-81119103 None:intergenic 50.0%
ATGACACTCAGGACACGAGA+TGG - chr3.2:81117972-81117991 MS.gene40955:intron 50.0%
ATGGAAAGACTACTGTCCCG+TGG - chr3.2:81116749-81116768 MS.gene40955:intron 50.0%
ATTTGCAAGATGGGGAAGGG+AGG - chr3.2:81115987-81116006 MS.gene40955:intron 50.0%
CCATTATTCCCTCTGCTTCC+AGG + chr3.2:81117749-81117768 None:intergenic 50.0%
CCTGGAAGCAGAGGGAATAA+TGG - chr3.2:81117746-81117765 MS.gene40955:CDS 50.0%
CTCTTCTGCTTTCATCCACC+GGG - chr3.2:81118338-81118357 MS.gene40955:CDS 50.0%
CTGGCATGTTAATTCCCAGC+CGG + chr3.2:81118996-81119015 None:intergenic 50.0%
CTTGAAACCAAGACTGCTCC+AGG + chr3.2:81117599-81117618 None:intergenic 50.0%
GAAGAGGGTTTCTGTGAGTG+TGG - chr3.2:81116201-81116220 MS.gene40955:intron 50.0%
GACACGAGATGGATACCCAT+AGG - chr3.2:81117983-81118002 MS.gene40955:intron 50.0%
GCGCATGCAAGTAGCAAAGA+GGG - chr3.2:81118476-81118495 MS.gene40955:CDS 50.0%
GGATTGGATCAGCAGCAAAC+TGG - chr3.2:81119042-81119061 MS.gene40955:CDS 50.0%
GGCGTAAACTTGGAACCTTC+TGG + chr3.2:81116705-81116724 None:intergenic 50.0%
GGGAAATTCTCATGGCCATC+AGG - chr3.2:81115797-81115816 MS.gene40955:CDS 50.0%
GGGGAATGATGCCAAGAAGA+GGG - chr3.2:81116186-81116205 MS.gene40955:intron 50.0%
GGGGGAAAGGGAAATTCTCA+TGG - chr3.2:81115789-81115808 MS.gene40955:CDS 50.0%
GTGATGTGTATGAGGGATGG+TGG - chr3.2:81115957-81115976 MS.gene40955:intron 50.0%
GTGTGTTTACGTGGCGTGAT+GGG - chr3.2:81116143-81116162 MS.gene40955:intron 50.0%
GTTTACGCCTCCCCATCAAT+CGG - chr3.2:81116716-81116735 MS.gene40955:intron 50.0%
TCAACGGCTGAGATGGATGT+GGG + chr3.2:81119204-81119223 None:intergenic 50.0%
TCTACCCCTTCAGAGAGTAG+CGG - chr3.2:81119075-81119094 MS.gene40955:CDS 50.0%
TCTCACCGCTACTCTCTGAA+GGG + chr3.2:81119083-81119102 None:intergenic 50.0%
TCTCCTGATCTAAGCTCTCG+AGG + chr3.2:81116645-81116664 None:intergenic 50.0%
TGCGCATGCAAGTAGCAAAG+AGG - chr3.2:81118475-81118494 MS.gene40955:CDS 50.0%
TGGACAAGGTTTCCTCCAGA+AGG - chr3.2:81116687-81116706 MS.gene40955:intron 50.0%
TGTATACGTCGCCGTTTGGA+AGG + chr3.2:81115673-81115692 None:intergenic 50.0%
TGTGAGTTCCTGGAAGCAGA+GGG - chr3.2:81117738-81117757 MS.gene40955:intron 50.0%
! AAATCCACCGATTGATGGGG+AGG + chr3.2:81116726-81116745 None:intergenic 50.0%
! AAGAGTGCATACCGGCCTAT+GGG + chr3.2:81118001-81118020 None:intergenic 50.0%
! ATGGGGAAGGGAGGTATATG+TGG - chr3.2:81115996-81116015 MS.gene40955:intron 50.0%
! ATGTGTATGAGGGATGGTGG+AGG - chr3.2:81115960-81115979 MS.gene40955:intron 50.0%
! CTTTGCTACTTGCATGCGCA+TGG + chr3.2:81118475-81118494 None:intergenic 50.0%
! GGGAGGTATATGTGGAGGAA+TGG - chr3.2:81116004-81116023 MS.gene40955:intron 50.0%
! GTTGGTAGGACTTGAGGCTT+AGG - chr3.2:81118746-81118765 MS.gene40955:CDS 50.0%
! TTGATGGGGAGGCGTAAACT+TGG + chr3.2:81116715-81116734 None:intergenic 50.0%
!! ATGGTGGTTGGTAGGACTTG+AGG - chr3.2:81118740-81118759 MS.gene40955:CDS 50.0%
!! CGTGATGGGAGTGTTTCATC+AGG - chr3.2:81116157-81116176 MS.gene40955:intron 50.0%
!! GAGATTGGTGGTGTTGGTGT+TGG - chr3.2:81116355-81116374 MS.gene40955:intron 50.0%
!! GATTAGTTGGTGGCCATGTC+AGG - chr3.2:81117206-81117225 MS.gene40955:CDS 50.0%
!! GGTGTTGGTGATGTAGGGTA+TGG - chr3.2:81116370-81116389 MS.gene40955:intron 50.0%
!! GGTGTTGGTGTTGGTGATGT+AGG - chr3.2:81116364-81116383 MS.gene40955:intron 50.0%
ACTACTGTCCCGTGGTGTTC+AGG - chr3.2:81116757-81116776 MS.gene40955:intron 55.0%
AGAGGACCTCTAATCCGGCT+GGG - chr3.2:81118979-81118998 MS.gene40955:CDS 55.0%
CAACGGCTGAGATGGATGTG+GGG + chr3.2:81119203-81119222 None:intergenic 55.0%
CCAAACGGCGACGTATACAG+TGG - chr3.2:81115674-81115693 MS.gene40955:CDS 55.0%
CCACTGTATACGTCGCCGTT+TGG + chr3.2:81115677-81115696 None:intergenic 55.0%
CGAGATGGATACCCATAGGC+CGG - chr3.2:81117987-81118006 MS.gene40955:intron 55.0%
CTGTGAGTTCCTGGAAGCAG+AGG - chr3.2:81117737-81117756 MS.gene40955:intron 55.0%
CTTGGGATCAACGGCTGAGA+TGG + chr3.2:81119211-81119230 None:intergenic 55.0%
GGAAACACACCACACGGCAA+AGG - chr3.2:81115707-81115726 MS.gene40955:CDS 55.0%
GGGAGAATGGTGTGCCGAAA+GGG - chr3.2:81116116-81116135 MS.gene40955:intron 55.0%
GGGGGAATGATGCCAAGAAG+AGG - chr3.2:81116185-81116204 MS.gene40955:intron 55.0%
GGTGTGTTTACGTGGCGTGA+TGG - chr3.2:81116142-81116161 MS.gene40955:intron 55.0%
GTGCCTCGAGAGCTTAGATC+AGG - chr3.2:81116639-81116658 MS.gene40955:intron 55.0%
TCAGGGTCCATGGAAGGTTC+TGG - chr3.2:81115845-81115864 MS.gene40955:intron 55.0%
TGGGAGAATGGTGTGCCGAA+AGG - chr3.2:81116115-81116134 MS.gene40955:intron 55.0%
! CTCACCGCTACTCTCTGAAG+GGG + chr3.2:81119082-81119101 None:intergenic 55.0%
! GAAGAGTGCATACCGGCCTA+TGG + chr3.2:81118002-81118021 None:intergenic 55.0%
! GCGGAGAGAGTGTGTAAAGC+TGG - chr3.2:81119021-81119040 MS.gene40955:CDS 55.0%
! GGGAAGGGAGGTATATGTGG+AGG - chr3.2:81115999-81116018 MS.gene40955:intron 55.0%
ACTGTCCCGTGGTGTTCAGG+TGG - chr3.2:81116760-81116779 MS.gene40955:intron 60.0%
CACACTCTCTCCGCTCTTGC+TGG + chr3.2:81119015-81119034 None:intergenic 60.0%
CAGAGGACCTCTAATCCGGC+TGG - chr3.2:81118978-81118997 MS.gene40955:CDS 60.0%
CCAAGACTGCTCCAGGCGAA+AGG + chr3.2:81117592-81117611 None:intergenic 60.0%
CCTTTCGCCTGGAGCAGTCT+TGG - chr3.2:81117589-81117608 MS.gene40955:intron 60.0%
GGCCATGTCAGGTGCTCATC+AGG - chr3.2:81117217-81117236 MS.gene40955:CDS 60.0%
TACGCCTCCCCATCAATCGG+TGG - chr3.2:81116719-81116738 MS.gene40955:intron 60.0%
TGGGAGCTTGATGGGGAAGC+TGG - chr3.2:81116265-81116284 MS.gene40955:intron 60.0%
! CAGCCGGATTAGAGGTCCTC+TGG + chr3.2:81118980-81118999 None:intergenic 60.0%
GCCGTCGACCACCGCGAACA+CGG - chr3.2:81115618-81115637 MS.gene40955:CDS 70.0%
GCCGTGTTCGCGGTGGTCGA+CGG + chr3.2:81115622-81115641 None:intergenic 70.0%
GGTGACACGCGCCGTGTTCG+CGG + chr3.2:81115632-81115651 None:intergenic 70.0%
GTTCGCGGTGGTCGACGGCA+TGG + chr3.2:81115617-81115636 None:intergenic 70.0%
GACACGCGCCGTGTTCGCGG+TGG + chr3.2:81115629-81115648 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 81115518 81119287 81115518 ID=MS.gene40955
chr3.2 mRNA 81115518 81119287 81115518 ID=MS.gene40955.t1;Parent=MS.gene40955
chr3.2 exon 81118296 81119287 81118296 ID=MS.gene40955.t1.exon1;Parent=MS.gene40955.t1
chr3.2 CDS 81118296 81119287 81118296 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
chr3.2 exon 81118027 81118191 81118027 ID=MS.gene40955.t1.exon2;Parent=MS.gene40955.t1
chr3.2 CDS 81118027 81118191 81118027 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
chr3.2 exon 81117743 81117908 81117743 ID=MS.gene40955.t1.exon3;Parent=MS.gene40955.t1
chr3.2 CDS 81117743 81117908 81117743 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
chr3.2 exon 81117467 81117577 81117467 ID=MS.gene40955.t1.exon4;Parent=MS.gene40955.t1
chr3.2 CDS 81117467 81117577 81117467 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
chr3.2 exon 81117177 81117370 81117177 ID=MS.gene40955.t1.exon5;Parent=MS.gene40955.t1
chr3.2 CDS 81117177 81117370 81117177 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
chr3.2 exon 81116953 81117083 81116953 ID=MS.gene40955.t1.exon6;Parent=MS.gene40955.t1
chr3.2 CDS 81116953 81117083 81116953 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
chr3.2 exon 81116797 81116854 81116797 ID=MS.gene40955.t1.exon7;Parent=MS.gene40955.t1
chr3.2 CDS 81116797 81116854 81116797 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
chr3.2 exon 81115518 81115824 81115518 ID=MS.gene40955.t1.exon8;Parent=MS.gene40955.t1
chr3.2 CDS 81115518 81115824 81115518 ID=cds.MS.gene40955.t1;Parent=MS.gene40955.t1
Gene Sequence

>MS.gene40955

ATGCAAGAAACATTATTAACTATTTCGGAGCACCACCACCAAAACACAAATGCAAAGAAAAACGAGGAAATGGAAGTAGTAATAGTATCATCATCACCATGCCGTCGACCACCGCGAACACGGCGCGTGTCACCGACGCCAGTAGAAAAACACCTTCCAAACGGCGACGTATACAGTGGAAGTTTATCAGGAAACACACCACACGGCAAAGGTAAATACGTATGGAACGATGGATGCATGTACCAAGGAGAATGGAAGAAAGGTAAAGCATGGGGGAAAGGGAAATTCTCATGGCCATCAGGAGCTACTTATGAAGGTGATTTTATTTCAGGGTCCATGGAAGGTTCTGGAACTTTTGTTGGTGTGGAAGGTGATACTTATAAAGGTTCTTGGGTTTCTGATAGGAAACATGGGTTTGGTGAGAAATGTTATGCTAATGGTGATGTGTATGAGGGATGGTGGAGGTGCAATTTGCAAGATGGGGAAGGGAGGTATATGTGGAGGAATGGGAATGAGTATGTTGGTGAATGGAAATGTGGTGCTATATGTGGTAATGGTGTTTTAATTTGGAAGAATGGGAATCGTTATGTGGGTTGTTGGGAGAATGGTGTGCCGAAAGGGAAAGGTGTGTTTACGTGGCGTGATGGGAGTGTTTCATCAGGGAATTGGGGGAATGATGCCAAGAAGAGGGTTTCTGTGAGTGTGGATGATGGTTCTAAGAGTGTGGTTTTTCCTAGGATTTGTATTTGGGAGCTTGATGGGGAAGCTGGTGATATTACTTGTGATATTGTTGATAATGTGGAAGCTTGTATGTTTTATAGAGATGGAAGTGAATCAGAGATTGGTGGTGTTGGTGTTGGTGATGTAGGGTATGGACATTCACAGAAGAGTCCTTGTTATTCGATCGATGGGGATGTTAAGAAACCGGGTTATACTGTTTGTAAGGGACATAAGAACTATGATTTGATTCTTAATCTTCAATTGGGTATTAGGTGTGTTGTTTTGTGTTATCTACATTGTTAGTTTGGATTTGGATTTGGTTTATTTTTATGTGTTTGGCGTTTTTAATAAGATTGTGGTTTTGTTTTTGTTTTAGATATTGTGTTGGGAAGCATGCTTCGGTGCCTCGAGAGCTTAGATCAGGAGATTTTGATCCAAAGGAGAAATTCTGGACAAGGTTTCCTCCAGAAGGTTCCAAGTTTACGCCTCCCCATCAATCGGTGGATTTTAGATGGAAAGACTACTGTCCCGTGGTGTTCAGGTGGAAATAATATCTGAATCAATTTTCTTATATGTTGATTGTTTAATTGATGTTATGTGTGTATTAATGATGTTTGTATTTTGGTGGGTGGTTGTTTGTTTCTTTGTTGGGTATTTAGGCATTTGAGGGAATTATTTGCGATTGATCCTGCCGATTACATGCTTGCTATTTGTGGCAATGATACATTGAGGGAAATGTCTTCTCCTGGAAAAAGTGGAAGCTTCTTTTACCTTACTCAAGATGACCGATTTGTAATCAAAACCTTGAAGAAGTCTGAAGTCAAGGTTAGTTGTTAGTTCCTAGCCTTAATTAATTACTAGACTTGAAAAAGCATTATGTTTGATGAGAAAAGTATAAAACCTATATTGAGCAAGGTGAAATTTCAATCACAGCTTTTAGTCACTATGCTTTTTTCCTCTGTTTCAATGATTAGTTGGTGGCCATGTCAGGTGCTCATCAGGATGCTTCCCAGTTACTATCAACATGTTTCTCAGTACAAGAACTCGTTGGTTACGAAATTCCTGGGAGTTCATTGTGTCAAACCTATTGGAGGCCAAAAGGTATGGACTACCTAGTTTAAATTTTGCACTGAACTGATGTACTATATGAATGTTTGTAATAATATAATGAATACTTGTATTGCTATGGAAAAACAGACCCGATTTATTGTAATGGGCAATGTGTTTTGTTCGGAGTATCGAATTCATAAGCGATTTGACCTCAAAGGTTCATCTCATGGTCGGACAACCGATAAACTCCGTAAGGATATTGATGAGACTACTACTCTTAAAGACCTTGATCTTAGTTTTGCCTTTCGCCTGGAGCAGTCTTGGTTTCAAGAGCTAAAATGGTACAGAATTTACGTCCTTGTGTAAAGTTTCTTTCACTTTTAGCATTTTTATGATGTTCTTAGAGTTGGTCTTTTGTAATGATTTTTGCTCAGGCAACTTGATAGAGACTGTGAGTTCCTGGAAGCAGAGGGAATAATGGACTACAGTTTTCTCATTGGCCTTCATTTTCGTGATGATTACTCATCGGATGAAATGAAAAGTTCACCTAATGAGTTGTGTTCTGGTATGTGTCTTCTTGCTTCCTCCTAGTTCCATGTTTCCTTTCATGTGAATTTGTCCGATCCAAGGGTTAAAAGATTTGTGGGATTATGGTTTTTGCAGGCAAGAGAGACATGCAAAATGATGACACTCAGGACACGAGATGGATACCCATAGGCCGGTATGCACTCTTCACTTTATCACCGTATCTGATTGTTTTTGTTGTTTCAGCTTGGTGAATAAATCCTTGTGAAATTATAAAAATTTACTGCTAAGATTGTCTTCCTTGAATTTTCCATATTTAGTCCCAAAGAGATAAGTTTTGAGGATTTAGAAATGCTGGTGCGGTTCTACTATTAGCTTAAGCTGTTATGTGAATTCCAACCCATCATTTATTGATTTGTTCTAGAAATCAAAGTCACTTATGGGAATGTGGATTCATGGGACATGGACCATTTTTTATTGCTACATTTTATGAAAAGATTATTCATTTAGGATATAGCAGTTTGTCTCTTCTGCTTTCATCCACCGGGTCATTTCTTTTACTTTTATGCATGTGCCATGTTCTTGAGCTTTAGTCTATCTGGACCCGCCATAATGCAAATAGAAGCAAAATGCTTCCACCCTAAACTAGCAATATTGGCCCATGCGCATGCAAGTAGCAAAGAGGGATATGAACCACTACTAGTCATGTAGAAATAAAGCAGTGGCAGATGAATTAGCATTCTCCAGTCCTCTATCTGTGATTTAGAAGTGACATATGCTCCTGTTTGTTGAGATGGACCACAATGACTTGATTTGTCATGGCCAATGTTATAGTAAGTTTTTTTGACAACAAATGCTGGAGTGGTCGTTTGAGCAGAACCTTCTCTGTAAAGCTATTTGTTAGTTGACAATGATATTGATAGAGCAATGGTGGTTGGTAGGACTTGAGGCTTAGGAAATACATTTGTGTGCCAGTTACATATAAATATTGACATTTTTTCTGATATACATTACTCTTTCTTTGTTAAAAATGCTAAATTCTAAACTGTATTTTAAGTCATAAGTTTTAGTAATCCGTTTCTCTTGGGCTCTCTTTCTTATGTGAGTTTACATCCTAACTATGCAGATATTTAATATTTGATTTGAATTATGATTCTTGATATACCAGAGGACCTCTAATCCGGCTGGGAATTAACATGCCAGCAAGAGCGGAGAGAGTGTGTAAAGCTGGATTGGATCAGCAGCAAACTGGAAGTAGCAAATCTACCCCTTCAGAGAGTAGCGGTGAGATCTCTGATGTAATCCTTTATTTTGGCATCATTGACATTCTCCAAGATTATGATATTAGCAAAAAGCTAGAGCATGCATACAAGTCACTACAAGTGGACCCCACATCCATCTCAGCCGTTGATCCCAAGCTATATTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTGGGGGACAAATAA
Protein sequence

>MS.gene40955.t1

MQETLLTISEHHHQNTNAKKNEEMEVVIVSSSPCRRPPRTRRVSPTPVEKHLPNGDVYSGSLSGNTPHGKGKYVWNDGCMYQGEWKKGKAWGKGKFSWPSGATYEGDFISGSMEGSGTFVGVEGDTYKGSWVSDRKHGFGEKCYANGDVYEGWWRCNLQDGEGRYMWRNGNEYVGEWKCGAICGNGVLIWKNGNRYVGCWENGVPKGKGVFTWRDGSVSSGNWGNDAKKRVSVSVDDGSKSVVFPRICIWELDGEAGDITCDIVDNVEACMFYRDGSESEIGGVGVGDVGYGHSQKSPCYSIDGDVKKPGYTVCKGHKNYDLILNLQLGIRYCVGKHASVPRELRSGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFVIKTLKKSEVKVLIRMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKLRKDIDETTTLKDLDLSFAFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDYSSDEMKSSPNELCSGKRDMQNDDTQDTRWIPIGRGPLIRLGINMPARAERVCKAGLDQQQTGSSKSTPSESSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFIHRIFVGDK