Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41278.t1 | XP_003589853.1 | 97.2 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 5.50E-199 | 703.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41278.t1 | Q08448 | 27.8 | 263 | 148 | 10 | 27 | 275 | 2 | 236 | 7.9e-13 | 76.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41278.t1 | G7IDH3 | 97.2 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 4.0e-199 | 703.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053082 | MS.gene41278 | 0.803575 | 3.26E-49 | -1.69E-46 |
MS.gene056272 | MS.gene41278 | 0.815226 | 1.03E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41278.t1 | MTR_1g040460 | 97.175 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 0.0 | 714 |
MS.gene41278.t1 | MTR_4g128800 | 52.825 | 354 | 146 | 6 | 20 | 353 | 15 | 367 | 1.80e-119 | 350 |
MS.gene41278.t1 | MTR_4g128800 | 50.693 | 361 | 156 | 7 | 14 | 354 | 9 | 367 | 8.27e-113 | 334 |
MS.gene41278.t1 | MTR_3g110530 | 50.578 | 346 | 154 | 6 | 23 | 352 | 53 | 397 | 7.66e-109 | 324 |
MS.gene41278.t1 | MTR_4g128800 | 54.545 | 264 | 103 | 3 | 14 | 260 | 9 | 272 | 2.39e-92 | 277 |
MS.gene41278.t1 | MTR_8g086260 | 41.341 | 358 | 183 | 5 | 20 | 350 | 79 | 436 | 2.32e-87 | 270 |
MS.gene41278.t1 | MTR_2g015960 | 42.296 | 331 | 169 | 3 | 30 | 338 | 83 | 413 | 5.67e-83 | 259 |
MS.gene41278.t1 | MTR_8g086260 | 41.471 | 340 | 172 | 5 | 20 | 332 | 79 | 418 | 3.02e-82 | 257 |
MS.gene41278.t1 | MTR_2g015960 | 48.305 | 236 | 115 | 2 | 30 | 258 | 22 | 257 | 3.26e-74 | 231 |
MS.gene41278.t1 | MTR_2g015960 | 48.305 | 236 | 115 | 2 | 30 | 258 | 83 | 318 | 1.14e-73 | 231 |
MS.gene41278.t1 | MTR_8g086260 | 43.431 | 274 | 146 | 3 | 20 | 284 | 79 | 352 | 1.63e-73 | 233 |
MS.gene41278.t1 | MTR_8g086260 | 44.980 | 249 | 129 | 2 | 20 | 260 | 79 | 327 | 1.82e-71 | 226 |
MS.gene41278.t1 | MTR_8g086260 | 42.308 | 234 | 127 | 2 | 20 | 245 | 79 | 312 | 3.84e-61 | 199 |
MS.gene41278.t1 | MTR_8g086260 | 42.308 | 234 | 127 | 2 | 20 | 245 | 79 | 312 | 5.59e-61 | 198 |
MS.gene41278.t1 | MTR_7g405800 | 45.882 | 85 | 37 | 2 | 98 | 173 | 143 | 227 | 2.95e-14 | 71.6 |
MS.gene41278.t1 | MTR_6g005650 | 45.882 | 85 | 37 | 2 | 98 | 173 | 210 | 294 | 1.78e-13 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41278.t1 | AT5G51180 | 72.159 | 352 | 95 | 2 | 2 | 352 | 6 | 355 | 0.0 | 538 |
MS.gene41278.t1 | AT5G51180 | 72.159 | 352 | 95 | 2 | 2 | 352 | 6 | 355 | 0.0 | 538 |
MS.gene41278.t1 | AT4G25770 | 52.707 | 351 | 157 | 6 | 8 | 352 | 69 | 416 | 3.98e-122 | 358 |
MS.gene41278.t1 | AT4G25770 | 51.003 | 349 | 162 | 6 | 8 | 350 | 69 | 414 | 3.77e-115 | 341 |
MS.gene41278.t1 | AT1G10040 | 49.435 | 354 | 157 | 5 | 14 | 352 | 64 | 410 | 8.88e-114 | 337 |
MS.gene41278.t1 | AT1G10040 | 48.810 | 336 | 150 | 5 | 14 | 334 | 64 | 392 | 3.56e-105 | 315 |
MS.gene41278.t1 | AT1G29120 | 40.230 | 348 | 187 | 3 | 23 | 350 | 94 | 440 | 4.17e-85 | 265 |
MS.gene41278.t1 | AT1G29120 | 40.230 | 348 | 187 | 3 | 23 | 350 | 94 | 440 | 4.17e-85 | 265 |
MS.gene41278.t1 | AT1G29120 | 40.230 | 348 | 187 | 3 | 23 | 350 | 95 | 441 | 4.29e-85 | 265 |
MS.gene41278.t1 | AT1G29120 | 39.828 | 349 | 188 | 4 | 23 | 350 | 94 | 441 | 6.31e-82 | 257 |
MS.gene41278.t1 | AT1G29120 | 40.059 | 337 | 181 | 3 | 23 | 339 | 94 | 429 | 6.21e-81 | 253 |
MS.gene41278.t1 | AT1G29120 | 43.939 | 264 | 145 | 2 | 23 | 284 | 94 | 356 | 1.56e-73 | 233 |
MS.gene41278.t1 | AT1G29120 | 43.939 | 264 | 145 | 2 | 23 | 284 | 94 | 356 | 1.65e-73 | 233 |
MS.gene41278.t1 | AT1G29120 | 43.111 | 225 | 125 | 2 | 23 | 245 | 94 | 317 | 1.03e-60 | 198 |
Find 84 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGAGACTTTACGCATATT+TGG | 0.190717 | 1.4:-34441601 | None:intergenic |
TGCTGCTCATAGTATAATTC+AGG | 0.276630 | 1.4:+34445645 | MS.gene41278:CDS |
AACTGTTGCTACACCTCATC+TGG | 0.300273 | 1.4:+34441777 | MS.gene41278:CDS |
AAGTTCATTATCACGTCTAA+TGG | 0.315583 | 1.4:-34444362 | None:intergenic |
CACCTTCCATATGTGAGATT+TGG | 0.316169 | 1.4:-34445796 | None:intergenic |
TCGATGGAAGCCGCGATGTT+TGG | 0.318300 | 1.4:+34439727 | MS.gene41278:CDS |
TTGCAAGTGTTGTTATTCAT+TGG | 0.328297 | 1.4:+34443563 | MS.gene41278:CDS |
ACATCATCTATGTCAGAAAA+TGG | 0.353937 | 1.4:-34445844 | None:intergenic |
CTTGCAGAGGAGCTGGTAAC+AGG | 0.354687 | 1.4:+34445562 | MS.gene41278:intron |
AACGAACCTATTCAGGATTC+AGG | 0.363980 | 1.4:+34441691 | MS.gene41278:CDS |
TCCTGAATAGGTTCGTTTCC+AGG | 0.365379 | 1.4:-34441685 | None:intergenic |
GGAAGAAGAATCAGAGGATT+TGG | 0.376802 | 1.4:-34439754 | None:intergenic |
TTATTGCCTGAATCCTGAAT+AGG | 0.376991 | 1.4:-34441697 | None:intergenic |
ACCTGGAAACGAACCTATTC+AGG | 0.394728 | 1.4:+34441684 | MS.gene41278:CDS |
ATGCTATTGGGAAGCTGTAT+AGG | 0.395975 | 1.4:+34441659 | MS.gene41278:CDS |
CAAATCTCTGTCTGCTACTA+CGG | 0.402209 | 1.4:-34445624 | None:intergenic |
ACATTCAGTTGGAGGATTAG+TGG | 0.411370 | 1.4:+34441630 | MS.gene41278:CDS |
TGTTAAAGAGCTTCCAGATA+AGG | 0.422694 | 1.4:+34439999 | MS.gene41278:CDS |
TTAGTGGCACGATATGCTAT+TGG | 0.426585 | 1.4:+34441646 | MS.gene41278:CDS |
CATCTTGTTGTCATGGTCAA+TGG | 0.429580 | 1.4:+34439783 | MS.gene41278:CDS |
TGTGACTTACTGAAAGATAA+TGG | 0.436010 | 1.4:+34444551 | MS.gene41278:CDS |
CTAGATGGTGTGGACGTAAT+GGG | 0.437976 | 1.4:+34440963 | MS.gene41278:CDS |
GAAAGTAAGGTGGACTCAAT+AGG | 0.438104 | 1.4:+34441721 | MS.gene41278:CDS |
CAAAGACCAAATCTCACATA+TGG | 0.440636 | 1.4:+34445790 | MS.gene41278:CDS |
GGACGTAATGGGCGAGAGAT+TGG | 0.454747 | 1.4:+34440974 | MS.gene41278:CDS |
TTCAGGCAATAAAGAAAGTA+AGG | 0.457167 | 1.4:+34441708 | MS.gene41278:CDS |
TAGTGGCACGATATGCTATT+GGG | 0.457957 | 1.4:+34441647 | MS.gene41278:CDS |
CTACACCTCATCTGGGGTCA+AGG | 0.463166 | 1.4:+34441785 | MS.gene41278:CDS |
ACTAGATGGTGTGGACGTAA+TGG | 0.463599 | 1.4:+34440962 | MS.gene41278:CDS |
GTGTCTAAGCATACACTAGA+TGG | 0.465275 | 1.4:+34440948 | MS.gene41278:CDS |
CGCCGACCATCTTGTTGTCA+TGG | 0.471162 | 1.4:+34439776 | MS.gene41278:CDS |
GTCATGGTCAATGGAATTCT+CGG | 0.471929 | 1.4:+34439792 | MS.gene41278:CDS |
TTTATTTCACATTCAGTTGG+AGG | 0.476703 | 1.4:+34441622 | MS.gene41278:CDS |
GTTCTTGCAGTTCAAAGGAT+TGG | 0.476839 | 1.4:+34439956 | MS.gene41278:intron |
TGTTTGTTCTTGCAGTTCAA+AGG | 0.477270 | 1.4:+34439951 | MS.gene41278:intron |
CATTGCGCTCTTTCAAACGT+CGG | 0.480963 | 1.4:+34443778 | MS.gene41278:CDS |
CAGGTTTGTCTTCTGTGTCA+TGG | 0.483977 | 1.4:+34445581 | MS.gene41278:CDS |
AATGGCTCTGACAAGATAGA+AGG | 0.486489 | 1.4:+34444569 | MS.gene41278:CDS |
ATTGCGCTCTTTCAAACGTC+GGG | 0.490034 | 1.4:+34443779 | MS.gene41278:CDS |
TCATTTATTTCACATTCAGT+TGG | 0.492843 | 1.4:+34441619 | MS.gene41278:CDS |
TTCCTTACCGATGACGATGA+AGG | 0.498846 | 1.4:+34443613 | MS.gene41278:CDS |
ATGAAAACTTGCAGAGGAGC+TGG | 0.506690 | 1.4:+34445555 | MS.gene41278:intron |
AGGTTTGTCTTCTGTGTCAT+GGG | 0.507004 | 1.4:+34445582 | MS.gene41278:CDS |
TGCCTTCATCGTCATCGGTA+AGG | 0.507102 | 1.4:-34443615 | None:intergenic |
GGGGTCAAGGGGAAATAAGC+AGG | 0.510973 | 1.4:+34441798 | MS.gene41278:CDS |
TCAACCATGCGTTTGAGCAA+TGG | 0.511924 | 1.4:-34443643 | None:intergenic |
TCGGGTTATATATTCAAATG+TGG | 0.520419 | 1.4:+34443797 | MS.gene41278:CDS |
TACACCTCATCTGGGGTCAA+GGG | 0.533503 | 1.4:+34441786 | MS.gene41278:CDS |
AATAGGTACAATATGTGGCC+TGG | 0.533865 | 1.4:+34441738 | MS.gene41278:CDS |
CGGGTTATATATTCAAATGT+GGG | 0.541716 | 1.4:+34443798 | MS.gene41278:CDS |
AGGTTTGCCTTCATCGTCAT+CGG | 0.543933 | 1.4:-34443620 | None:intergenic |
AAACTTAAGATATCGTTGGC+TGG | 0.544097 | 1.4:+34444329 | MS.gene41278:intron |
ACTGTTGCTACACCTCATCT+GGG | 0.546236 | 1.4:+34441778 | MS.gene41278:CDS |
ATTGAACTCTTAGGTCATTG+AGG | 0.551531 | 1.4:+34441564 | MS.gene41278:intron |
TTTCCCCTTGACCCCAGATG+AGG | 0.552414 | 1.4:-34441790 | None:intergenic |
AACATCGCGGCTTCCATCGA+CGG | 0.553364 | 1.4:-34439724 | None:intergenic |
TGCTCTTCATATACAACATG+TGG | 0.557368 | 1.4:-34444503 | None:intergenic |
TGCACATCGGAATCCGTCGA+TGG | 0.562592 | 1.4:+34439711 | MS.gene41278:CDS |
ACCTCCATTGCTCAAACGCA+TGG | 0.568348 | 1.4:+34443639 | MS.gene41278:CDS |
TTACGAAATTCATTGCCTCC+AGG | 0.577026 | 1.4:-34441756 | None:intergenic |
GACTCAATAGGTACAATATG+TGG | 0.583136 | 1.4:+34441733 | MS.gene41278:CDS |
ACCATGCGTTTGAGCAATGG+AGG | 0.583660 | 1.4:-34443640 | None:intergenic |
CGCATGGTTGAAGACTATGA+TGG | 0.595187 | 1.4:+34443655 | MS.gene41278:CDS |
GGGAAGCTGTATAGGCCACC+TGG | 0.595506 | 1.4:+34441667 | MS.gene41278:CDS |
GGGCGAGAGATTGGCAGAGG+AGG | 0.597828 | 1.4:+34440983 | MS.gene41278:CDS |
GACCATGACAACAAGATGGT+CGG | 0.605131 | 1.4:-34439778 | None:intergenic |
GACCAAATCTCACATATGGA+AGG | 0.605327 | 1.4:+34445794 | MS.gene41278:CDS |
AATGGGCGAGAGATTGGCAG+AGG | 0.611661 | 1.4:+34440980 | MS.gene41278:CDS |
ACACCTCATCTGGGGTCAAG+GGG | 0.612952 | 1.4:+34441787 | MS.gene41278:CDS |
ACGTGATAATGAACTTCCAA+AGG | 0.618137 | 1.4:+34444369 | MS.gene41278:CDS |
GTCGGCGGAAGAAGAATCAG+AGG | 0.622314 | 1.4:-34439760 | None:intergenic |
AAAGGATTGGAAGTTTGCGT+CGG | 0.624204 | 1.4:+34439969 | MS.gene41278:CDS |
TGTATATGAAGAGCATTGCA+AGG | 0.629600 | 1.4:+34444511 | MS.gene41278:CDS |
TAAGCATACACTAGATGGTG+TGG | 0.631739 | 1.4:+34440953 | MS.gene41278:CDS |
CATTGACCATGACAACAAGA+TGG | 0.636800 | 1.4:-34439782 | None:intergenic |
TGGTCAATGGAATTCTCGGA+AGG | 0.650694 | 1.4:+34439796 | MS.gene41278:CDS |
AGGCAATAAAGAAAGTAAGG+TGG | 0.653905 | 1.4:+34441711 | MS.gene41278:CDS |
CATCGGTAAGGAAAAGATGT+CGG | 0.655327 | 1.4:-34443603 | None:intergenic |
GAAGAACGATGTGTGCACAT+CGG | 0.677135 | 1.4:+34439698 | MS.gene41278:CDS |
CATGACAACAAGATGGTCGG+CGG | 0.691898 | 1.4:-34439775 | None:intergenic |
TGAATAGGTTCGTTTCCAGG+TGG | 0.692678 | 1.4:-34441682 | None:intergenic |
AGGTACAATATGTGGCCTGG+AGG | 0.694202 | 1.4:+34441741 | MS.gene41278:CDS |
CTGTTGCTACACCTCATCTG+GGG | 0.704440 | 1.4:+34441779 | MS.gene41278:CDS |
ATTTGGAACTCCAAACATCG+CGG | 0.732445 | 1.4:-34439737 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTGTTATTTATTTTTTTAG+AGG | + | chr1.4:34445437-34445456 | MS.gene41278:intron | 10.0% |
!!! | TGTTAAATTCATTTTATATA+TGG | + | chr1.4:34443710-34443729 | MS.gene41278:intron | 10.0% |
!! | AAAAAAAAACACAAAACTAA+CGG | + | chr1.4:34444024-34444043 | MS.gene41278:intron | 15.0% |
!! | AAAAAAAAACACAAAACTAT+TGG | - | chr1.4:34444155-34444174 | None:intergenic | 15.0% |
!! | CAAATAAAAATATATGCAAT+AGG | - | chr1.4:34443885-34443904 | None:intergenic | 15.0% |
!! | GAAAAACAATCAAAATAAAA+TGG | - | chr1.4:34442142-34442161 | None:intergenic | 15.0% |
!! | TAATATATGTGACTAATATA+AGG | - | chr1.4:34441087-34441106 | None:intergenic | 15.0% |
!! | TAGAAAATTATAGATAAATG+TGG | + | chr1.4:34442788-34442807 | MS.gene41278:intron | 15.0% |
!! | TATTGAGATTGTAATTTAAA+TGG | - | chr1.4:34445246-34445265 | None:intergenic | 15.0% |
!! | TTATTTACTGTATGAAAAAA+AGG | - | chr1.4:34442041-34442060 | None:intergenic | 15.0% |
!!! | AATACCAATATTTTTACAAA+GGG | + | chr1.4:34444086-34444105 | MS.gene41278:intron | 15.0% |
!!! | AGTATTTAAACTTGTTTATT+GGG | + | chr1.4:34443490-34443509 | MS.gene41278:intron | 15.0% |
!!! | ATACTATATCTTTTATTCTT+CGG | + | chr1.4:34442963-34442982 | MS.gene41278:intron | 15.0% |
!!! | CATTTGTTTTAAGAAAAATA+TGG | - | chr1.4:34444600-34444619 | None:intergenic | 15.0% |
!!! | CTATTGCATATATTTTTATT+TGG | + | chr1.4:34443883-34443902 | MS.gene41278:intron | 15.0% |
!!! | TAATAATGTATAGTTGATAT+AGG | - | chr1.4:34443004-34443023 | None:intergenic | 15.0% |
!!! | TAATATACTGTTTTATTTGA+AGG | - | chr1.4:34441445-34441464 | None:intergenic | 15.0% |
!!! | TAATTATTTTACATTACTCA+CGG | - | chr1.4:34445303-34445322 | None:intergenic | 15.0% |
!!! | TGTACATTTTAAATGATATA+TGG | + | chr1.4:34444655-34444674 | MS.gene41278:intron | 15.0% |
!!! | TTTTCTTAAAATCAGTTATT+TGG | + | chr1.4:34442334-34442353 | MS.gene41278:intron | 15.0% |
!!! | TTTTTTCATACAGTAAATAA+TGG | + | chr1.4:34442041-34442060 | MS.gene41278:intron | 15.0% |
!! | AAAAAATTCTTTCGTTTACT+CGG | + | chr1.4:34440690-34440709 | MS.gene41278:intron | 20.0% |
!! | AATATCACTAAATATACCTT+TGG | - | chr1.4:34444388-34444407 | None:intergenic | 20.0% |
!! | ATAAAAAACGGACATAAAAT+TGG | - | chr1.4:34440155-34440174 | None:intergenic | 20.0% |
!! | ATAAAAACTTAAGATATCGT+TGG | + | chr1.4:34444325-34444344 | MS.gene41278:intron | 20.0% |
!! | ATATAAGGCAATATAATCTA+TGG | - | chr1.4:34441072-34441091 | None:intergenic | 20.0% |
!! | CAATTTCTCAAATTATTTAC+TGG | + | chr1.4:34442070-34442089 | MS.gene41278:intron | 20.0% |
!! | CTTTGTAAAAATATTGGTAT+TGG | - | chr1.4:34444010-34443991 | None:intergenic | 20.0% |
!! | GAAACATGTAATAAATATGA+AGG | - | chr1.4:34443836-34443855 | None:intergenic | 20.0% |
!! | GAATTTATTATATCTTCACT+AGG | + | chr1.4:34441038-34441057 | MS.gene41278:intron | 20.0% |
!! | GTGAAAATATGAAATATGTA+TGG | + | chr1.4:34440551-34440570 | MS.gene41278:intron | 20.0% |
!! | TTATAAGATCTATTAGGAAT+GGG | - | chr1.4:34445074-34445093 | None:intergenic | 20.0% |
!! | TTTAGTGATGTAAATATGTT+TGG | + | chr1.4:34444446-34444465 | MS.gene41278:intron | 20.0% |
!!! | AGATATTGTGTGATTTTTTT+TGG | + | chr1.4:34445133-34445152 | MS.gene41278:intron | 20.0% |
!!! | ATACTGTTTTTCTAGTTATA+TGG | + | chr1.4:34444881-34444900 | MS.gene41278:intron | 20.0% |
!!! | ATTTTGATTGTTTTTCTTCT+GGG | + | chr1.4:34442146-34442165 | MS.gene41278:intron | 20.0% |
!!! | CAATACCAATATTTTTACAA+AGG | + | chr1.4:34444085-34444104 | MS.gene41278:intron | 20.0% |
!!! | CATATTTAAGCCTTTTTATT+TGG | + | chr1.4:34444293-34444312 | MS.gene41278:intron | 20.0% |
!!! | GAGTATTTAAACTTGTTTAT+TGG | + | chr1.4:34443489-34443508 | MS.gene41278:intron | 20.0% |
!!! | GATATCTTAAGTTTTTATGA+AGG | - | chr1.4:34444323-34444342 | None:intergenic | 20.0% |
!!! | GATGTATTTGTTATTGTAAT+TGG | + | chr1.4:34439869-34439888 | MS.gene41278:intron | 20.0% |
!!! | TAATTTTTAAGATGCAATGT+TGG | - | chr1.4:34441826-34441845 | None:intergenic | 20.0% |
!!! | TATTTCTATCAAGTATTAAC+AGG | + | chr1.4:34441539-34441558 | MS.gene41278:intron | 20.0% |
!!! | TATTTTGATTGTTTTTCTTC+TGG | + | chr1.4:34442145-34442164 | MS.gene41278:intron | 20.0% |
!!! | TTGTGTTTTTTTTTAACAGA+GGG | - | chr1.4:34444180-34444161 | None:intergenic | 20.0% |
!!! | TTTGTGTTTTTTTTTAACAG+AGG | - | chr1.4:34444179-34444160 | None:intergenic | 20.0% |
! | AAACACAAAACTATTGGTAT+TGG | - | chr1.4:34444149-34444168 | None:intergenic | 25.0% |
! | AAACATCAAACAACTAGTAA+AGG | - | chr1.4:34442561-34442580 | None:intergenic | 25.0% |
! | AACATGACAAAATCATTTGA+AGG | - | chr1.4:34443745-34443764 | None:intergenic | 25.0% |
! | AAGAGCAAGACTTAAAATAA+AGG | - | chr1.4:34442884-34442903 | None:intergenic | 25.0% |
! | AATCAAATCGTGTCATATTA+AGG | - | chr1.4:34445420-34445439 | None:intergenic | 25.0% |
! | AATTACTTTCTGACATATGT+TGG | + | chr1.4:34441391-34441410 | MS.gene41278:intron | 25.0% |
! | ATAGTGTAGACATAATCAAT+TGG | - | chr1.4:34444792-34444811 | None:intergenic | 25.0% |
! | ATTCAGAATGCGATAAAAAA+CGG | - | chr1.4:34440167-34440186 | None:intergenic | 25.0% |
! | CAAAATGTAAGATTTCTAAC+CGG | + | chr1.4:34445531-34445550 | MS.gene41278:intron | 25.0% |
! | CAATGTCTCAAATTATTTAC+TGG | + | chr1.4:34442099-34442118 | MS.gene41278:intron | 25.0% |
! | CACTTATGAATATCTTATCA+AGG | - | chr1.4:34441220-34441239 | None:intergenic | 25.0% |
! | CATATTTGACACATTAGAAA+GGG | - | chr1.4:34445687-34445706 | None:intergenic | 25.0% |
! | CATGCACTTTGTAAAAATAT+TGG | - | chr1.4:34444205-34444224 | None:intergenic | 25.0% |
! | CATTAGTGAATCAAAATAGT+AGG | + | chr1.4:34442249-34442268 | MS.gene41278:intron | 25.0% |
! | CTTATAAGATCTATTAGGAA+TGG | - | chr1.4:34445075-34445094 | None:intergenic | 25.0% |
! | CTTTGTAAAAATATTGGTAC+TGG | - | chr1.4:34444199-34444218 | None:intergenic | 25.0% |
! | GAAATTCGTCATTTCAAATA+AGG | + | chr1.4:34441359-34441378 | MS.gene41278:intron | 25.0% |
! | GATATTCATAAGTGATGTAT+AGG | + | chr1.4:34441226-34441245 | MS.gene41278:intron | 25.0% |
! | GTTATTATCAACCAATACAA+AGG | - | chr1.4:34441262-34441281 | None:intergenic | 25.0% |
! | TAAAATTGGCAAAATTCAAC+TGG | - | chr1.4:34440141-34440160 | None:intergenic | 25.0% |
! | TAGAGTGAATGACAATTTAT+GGG | + | chr1.4:34443256-34443275 | MS.gene41278:intron | 25.0% |
! | TCATTTATTTCACATTCAGT+TGG | + | chr1.4:34441619-34441638 | MS.gene41278:CDS | 25.0% |
! | TGAAGGAAAACCAAATAAAA+AGG | - | chr1.4:34444306-34444325 | None:intergenic | 25.0% |
! | TGATTATGTCTACACTATTA+TGG | + | chr1.4:34444794-34444813 | MS.gene41278:intron | 25.0% |
! | TTAGAGTGAATGACAATTTA+TGG | + | chr1.4:34443255-34443274 | MS.gene41278:intron | 25.0% |
! | TTGCTAATGTTTCATTGAAA+AGG | - | chr1.4:34442523-34442542 | None:intergenic | 25.0% |
! | TTTAACAGAAAGTTAACAGA+GGG | + | chr1.4:34444172-34444191 | MS.gene41278:intron | 25.0% |
!! | AAAAAAAAGAGTATATCGTG+AGG | - | chr1.4:34443196-34443215 | None:intergenic | 25.0% |
!! | AAAAAAAGAGTATATCGTGA+GGG | - | chr1.4:34443195-34443214 | None:intergenic | 25.0% |
!! | ACAACTGCAATTTAAAACTT+TGG | - | chr1.4:34442738-34442757 | None:intergenic | 25.0% |
!! | ACAATAATCTAGTTCATACT+TGG | + | chr1.4:34440224-34440243 | MS.gene41278:intron | 25.0% |
!! | ATGTGGATATTTTTCATTGA+GGG | - | chr1.4:34444489-34444508 | None:intergenic | 25.0% |
!! | ATTCAAACAAAAAAAAGTGC+AGG | + | chr1.4:34444230-34444249 | MS.gene41278:intron | 25.0% |
!! | ATTTGGTTGTGAAATTTTGT+GGG | + | chr1.4:34442351-34442370 | MS.gene41278:intron | 25.0% |
!! | ATTTGGTTTAAATGTGTCAA+TGG | + | chr1.4:34443900-34443919 | MS.gene41278:intron | 25.0% |
!! | CTCTTTTATAGTTTCTTTCT+TGG | + | chr1.4:34443220-34443239 | MS.gene41278:intron | 25.0% |
!! | GTTCTATAAAACCATTTTGA+TGG | - | chr1.4:34445365-34445384 | None:intergenic | 25.0% |
!! | TATTCATGATCATTTGTTAG+TGG | + | chr1.4:34442401-34442420 | MS.gene41278:intron | 25.0% |
!! | TATTTGGTTGTGAAATTTTG+TGG | + | chr1.4:34442350-34442369 | MS.gene41278:intron | 25.0% |
!! | TTAGCAAATTTGAAGTATCT+GGG | + | chr1.4:34441321-34441340 | MS.gene41278:intron | 25.0% |
!! | TTCAAACAAAAAAAAGTGCA+GGG | + | chr1.4:34444231-34444250 | MS.gene41278:intron | 25.0% |
!! | TTGTTATTGTCATTGAATGT+TGG | + | chr1.4:34445468-34445487 | MS.gene41278:intron | 25.0% |
!! | TTTAGCAAATTTGAAGTATC+TGG | + | chr1.4:34441320-34441339 | MS.gene41278:intron | 25.0% |
!! | TTTTAACAGAAAGTTAACAG+AGG | + | chr1.4:34444171-34444190 | MS.gene41278:intron | 25.0% |
!!! | ACAATTTTTTGTGGTTTAAG+TGG | + | chr1.4:34440770-34440789 | MS.gene41278:intron | 25.0% |
!!! | AGATACTTCAAATTTGCTAA+AGG | - | chr1.4:34441321-34441340 | None:intergenic | 25.0% |
!!! | ATTGAAGTTTTGAGATTTTG+TGG | + | chr1.4:34439892-34439911 | MS.gene41278:intron | 25.0% |
!!! | CAATATTTTTACAAAGTGCA+GGG | + | chr1.4:34444091-34444110 | MS.gene41278:intron | 25.0% |
!!! | CAATATTTTTACAAAGTGCA+TGG | + | chr1.4:34444091-34444110 | MS.gene41278:intron | 25.0% |
!!! | CTTTTGGTTTGATAGAATTT+GGG | - | chr1.4:34442692-34442711 | None:intergenic | 25.0% |
!!! | GATACTTCAAATTTGCTAAA+GGG | - | chr1.4:34441320-34441339 | None:intergenic | 25.0% |
!!! | GCACTTTTTTTTGTTTGAAT+TGG | - | chr1.4:34444230-34444249 | None:intergenic | 25.0% |
!!! | GTACAAACAACAATTTTTTG+TGG | + | chr1.4:34440761-34440780 | MS.gene41278:intron | 25.0% |
!!! | GTTTTTGATTGATTTTGCTT+TGG | + | chr1.4:34439842-34439861 | MS.gene41278:intron | 25.0% |
!!! | TTTACATCAAAAGCATTACA+TGG | + | chr1.4:34443342-34443361 | MS.gene41278:intron | 25.0% |
!!! | TTTTGATAATGACAACTTTC+TGG | + | chr1.4:34445329-34445348 | MS.gene41278:intron | 25.0% |
AAAAACAGTATTGCAAAGGA+AGG | - | chr1.4:34444872-34444891 | None:intergenic | 30.0% | |
AAAAGATGGAGAAAGAATAG+AGG | - | chr1.4:34445754-34445773 | None:intergenic | 30.0% | |
AAAGGACTTAACTAGTTCAA+AGG | - | chr1.4:34442023-34442042 | None:intergenic | 30.0% | |
AAGATTTCACGTTCATTTGA+TGG | - | chr1.4:34443416-34443435 | None:intergenic | 30.0% | |
AAGTTCATTATCACGTCTAA+TGG | - | chr1.4:34444365-34444384 | None:intergenic | 30.0% | |
AATACAAGGTTCTATTGCAA+AGG | - | chr1.4:34440726-34440745 | None:intergenic | 30.0% | |
AATCGATCAATGAACACTAA+TGG | - | chr1.4:34445388-34445407 | None:intergenic | 30.0% | |
AATGAGACTTTACGCATATT+TGG | - | chr1.4:34441604-34441623 | None:intergenic | 30.0% | |
AGAAGAACAACGAAAATTGT+TGG | - | chr1.4:34442297-34442316 | None:intergenic | 30.0% | |
AGAAGCTAGTTGAAACAATT+AGG | + | chr1.4:34440353-34440372 | MS.gene41278:intron | 30.0% | |
AGCCTTAAAAACTAATGTTG+TGG | + | chr1.4:34442839-34442858 | MS.gene41278:intron | 30.0% | |
AGTGAATCAAAATAGTAGGA+GGG | + | chr1.4:34442253-34442272 | MS.gene41278:intron | 30.0% | |
ATAGATAAATGTGGCTAATG+CGG | + | chr1.4:34442797-34442816 | MS.gene41278:intron | 30.0% | |
ATATCAGTAAACTGGACAAA+AGG | - | chr1.4:34442609-34442628 | None:intergenic | 30.0% | |
ATCAAACCAAAAGCAAGTAT+TGG | + | chr1.4:34442699-34442718 | MS.gene41278:intron | 30.0% | |
ATCGATCAATGAACACTAAT+GGG | - | chr1.4:34445387-34445406 | None:intergenic | 30.0% | |
ATTGAAAAGGTTCAAACCAA+TGG | - | chr1.4:34442510-34442529 | None:intergenic | 30.0% | |
CAAACAACAACAACAAACTA+TGG | - | chr1.4:34440080-34440099 | None:intergenic | 30.0% | |
CACTAGACTAATGAAACATA+AGG | - | chr1.4:34441849-34441868 | None:intergenic | 30.0% | |
CCATATTTGACACATTAGAA+AGG | - | chr1.4:34445688-34445707 | None:intergenic | 30.0% | |
CCTCAAGTCATAGTTTATTT+GGG | + | chr1.4:34442443-34442462 | MS.gene41278:intron | 30.0% | |
CCTGCACTTTGTAAAAATAT+TGG | - | chr1.4:34444004-34443985 | None:intergenic | 30.0% | |
CCTTTCTAATGTGTCAAATA+TGG | + | chr1.4:34445685-34445704 | MS.gene41278:intron | 30.0% | |
CGGGTTATATATTCAAATGT+GGG | + | chr1.4:34443798-34443817 | MS.gene41278:CDS | 30.0% | |
CTAGAAAAACAGTATTGCAA+AGG | - | chr1.4:34444876-34444895 | None:intergenic | 30.0% | |
CTGTAAATAGCAAGAAAAGA+TGG | - | chr1.4:34445768-34445787 | None:intergenic | 30.0% | |
GAAGCTAGTTGAAACAATTA+GGG | + | chr1.4:34440354-34440373 | MS.gene41278:intron | 30.0% | |
GAATTTCCATATCAGTAAAC+TGG | - | chr1.4:34442617-34442636 | None:intergenic | 30.0% | |
GCTCTTTATCTTCAAATGTT+AGG | + | chr1.4:34442187-34442206 | MS.gene41278:intron | 30.0% | |
GTGATGTAAATATGTTTGGT+TGG | + | chr1.4:34444450-34444469 | MS.gene41278:intron | 30.0% | |
GTTTGATAGAATTTGGGTAT+GGG | - | chr1.4:34442686-34442705 | None:intergenic | 30.0% | |
TAACACTTATCATGTAACGA+TGG | - | chr1.4:34444992-34445011 | None:intergenic | 30.0% | |
TAACAGGAAATTGAACTCTT+AGG | + | chr1.4:34441555-34441574 | MS.gene41278:intron | 30.0% | |
TACTGATATGGAAATTCTCA+AGG | + | chr1.4:34442620-34442639 | MS.gene41278:intron | 30.0% | |
TAGTGAATCAAAATAGTAGG+AGG | + | chr1.4:34442252-34442271 | MS.gene41278:intron | 30.0% | |
TCATCATCATCTATAGAACA+CGG | - | chr1.4:34441121-34441140 | None:intergenic | 30.0% | |
TCGGGTTATATATTCAAATG+TGG | + | chr1.4:34443797-34443816 | MS.gene41278:CDS | 30.0% | |
TGAAAGAGGAAAACAATTGA+AGG | - | chr1.4:34444757-34444776 | None:intergenic | 30.0% | |
TGAATGACAATTTATGGGTT+TGG | + | chr1.4:34443261-34443280 | MS.gene41278:intron | 30.0% | |
TGTGACTTACTGAAAGATAA+TGG | + | chr1.4:34444551-34444570 | MS.gene41278:CDS | 30.0% | |
TTCAGGCAATAAAGAAAGTA+AGG | + | chr1.4:34441708-34441727 | MS.gene41278:CDS | 30.0% | |
TTTATTGGGTTTCGAATTTC+AGG | + | chr1.4:34443504-34443523 | MS.gene41278:intron | 30.0% | |
TTTATTTCACATTCAGTTGG+AGG | + | chr1.4:34441622-34441641 | MS.gene41278:CDS | 30.0% | |
! | AAAAAAGAGTATATCGTGAG+GGG | - | chr1.4:34443194-34443213 | None:intergenic | 30.0% |
! | ATGTTTCATTAGTCTAGTGA+TGG | + | chr1.4:34441850-34441869 | MS.gene41278:intron | 30.0% |
! | CATGTGGATATTTTTCATTG+AGG | - | chr1.4:34444490-34444509 | None:intergenic | 30.0% |
! | CTTTCTAGCACATAAATACA+AGG | - | chr1.4:34440740-34440759 | None:intergenic | 30.0% |
! | GAATGGAAAATGGAAGTTTT+TGG | + | chr1.4:34440525-34440544 | MS.gene41278:intron | 30.0% |
! | GGCATTTTGAATAACTCTTT+AGG | + | chr1.4:34445101-34445120 | MS.gene41278:intron | 30.0% |
! | TAGAATCTTGCTTTAGGTTA+CGG | - | chr1.4:34444969-34444988 | None:intergenic | 30.0% |
! | TATCTACCAATACTTGCTTT+TGG | - | chr1.4:34442708-34442727 | None:intergenic | 30.0% |
! | TCAGTAATCTAGTTCATACT+TGG | + | chr1.4:34440589-34440608 | MS.gene41278:intron | 30.0% |
! | TGTATAGTTGATATAGGATC+TGG | - | chr1.4:34442998-34443017 | None:intergenic | 30.0% |
! | TGTTTCATTAGTCTAGTGAT+GGG | + | chr1.4:34441851-34441870 | MS.gene41278:intron | 30.0% |
! | TTGCAAGTGTTGTTATTCAT+TGG | + | chr1.4:34443563-34443582 | MS.gene41278:CDS | 30.0% |
! | TTTTGCTACAAAAGATCCAT+TGG | + | chr1.4:34442491-34442510 | MS.gene41278:intron | 30.0% |
! | TTTTGTCCAGTTTACTGATA+TGG | + | chr1.4:34442608-34442627 | MS.gene41278:intron | 30.0% |
!! | AAATATGTTTGGTTGGTAGT+GGG | + | chr1.4:34444457-34444476 | MS.gene41278:intron | 30.0% |
!! | ATAATGACAACTTTCTGGTT+AGG | + | chr1.4:34445334-34445353 | MS.gene41278:intron | 30.0% |
!! | CAATATTTTTACAAAGGGCA+GGG | + | chr1.4:34444122-34444141 | MS.gene41278:intron | 30.0% |
!! | CATTGGATTTTTAGAAGAAC+AGG | + | chr1.4:34443580-34443599 | MS.gene41278:CDS | 30.0% |
!! | CCAATATTTTTACAAAGTGC+AGG | + | chr1.4:34444090-34444109 | MS.gene41278:intron | 30.0% |
!! | GTTTTAAATTGCAGTTGTGT+CGG | + | chr1.4:34442740-34442759 | MS.gene41278:intron | 30.0% |
!! | TAAATATGTTTGGTTGGTAG+TGG | + | chr1.4:34444456-34444475 | MS.gene41278:intron | 30.0% |
!! | TTCAGGTTCCATTTCTTTTT+GGG | + | chr1.4:34443521-34443540 | MS.gene41278:intron | 30.0% |
!!! | CACTTTTTTTTGTTTGGCAT+TGG | + | chr1.4:34443960-34443979 | MS.gene41278:intron | 30.0% |
!!! | CATCTTTTCTTGCTATTTAC+AGG | + | chr1.4:34445766-34445785 | MS.gene41278:intron | 30.0% |
!!! | GCTTTTGGTTTGATAGAATT+TGG | - | chr1.4:34442693-34442712 | None:intergenic | 30.0% |
!!! | TTTCAGGTTCCATTTCTTTT+TGG | + | chr1.4:34443520-34443539 | MS.gene41278:intron | 30.0% |
AAACTTAAGATATCGTTGGC+TGG | + | chr1.4:34444329-34444348 | MS.gene41278:intron | 35.0% | |
AAATTGTTGGCCCTAACATT+TGG | - | chr1.4:34442284-34442303 | None:intergenic | 35.0% | |
AGGCAATAAAGAAAGTAAGG+TGG | + | chr1.4:34441711-34441730 | MS.gene41278:CDS | 35.0% | |
ATGGGGATTAAAGAGACTAT+TGG | + | chr1.4:34441869-34441888 | MS.gene41278:intron | 35.0% | |
ATTGAACTCTTAGGTCATTG+AGG | + | chr1.4:34441564-34441583 | MS.gene41278:intron | 35.0% | |
CAAAGACCAAATCTCACATA+TGG | + | chr1.4:34445790-34445809 | MS.gene41278:CDS | 35.0% | |
CAGACTGATTGAGTTTGATT+GGG | + | chr1.4:34440409-34440428 | MS.gene41278:intron | 35.0% | |
CAGTGAACAAAAACCTTATC+TGG | - | chr1.4:34440015-34440034 | None:intergenic | 35.0% | |
CCCAAATAAACTATGACTTG+AGG | - | chr1.4:34442446-34442465 | None:intergenic | 35.0% | |
CCTGCCCTTTGTAAAAATAT+TGG | - | chr1.4:34444124-34444143 | None:intergenic | 35.0% | |
CGGTATTATGTTGCAATCTT+TGG | + | chr1.4:34442760-34442779 | MS.gene41278:intron | 35.0% | |
GAAAACAGAGTCCTTTGTAT+TGG | + | chr1.4:34441248-34441267 | MS.gene41278:intron | 35.0% | |
GACTCAATAGGTACAATATG+TGG | + | chr1.4:34441733-34441752 | MS.gene41278:CDS | 35.0% | |
GCAAAATACATCATTCAAGC+AGG | - | chr1.4:34442477-34442496 | None:intergenic | 35.0% | |
GCCTCAAGTCATAGTTTATT+TGG | + | chr1.4:34442442-34442461 | MS.gene41278:intron | 35.0% | |
GCGCTCTTATAAGATCTATT+AGG | - | chr1.4:34445080-34445099 | None:intergenic | 35.0% | |
GGTCAACGATTATATGAAAG+AGG | - | chr1.4:34444771-34444790 | None:intergenic | 35.0% | |
GGTTTGATAGAATTTGGGTA+TGG | - | chr1.4:34442687-34442706 | None:intergenic | 35.0% | |
GTAAACTGGACAAAAGGAAA+AGG | - | chr1.4:34442603-34442622 | None:intergenic | 35.0% | |
GTGCAATTGTAGTTCATACT+TGG | + | chr1.4:34440246-34440265 | MS.gene41278:intron | 35.0% | |
GTTAGGAGATACCATCAAAA+TGG | + | chr1.4:34445351-34445370 | MS.gene41278:intron | 35.0% | |
GTTATGCTTTACTAGTCACA+GGG | - | chr1.4:34441173-34441192 | None:intergenic | 35.0% | |
GTTGAAACAATTAGGGTTTC+AGG | + | chr1.4:34440361-34440380 | MS.gene41278:intron | 35.0% | |
TCAGACTGATTGAGTTTGAT+TGG | + | chr1.4:34440408-34440427 | MS.gene41278:intron | 35.0% | |
TCATAGTGATTGAGTTCGAA+TGG | + | chr1.4:34440448-34440467 | MS.gene41278:intron | 35.0% | |
TCTTCACCGAACATATGATT+CGG | + | chr1.4:34445046-34445065 | MS.gene41278:intron | 35.0% | |
TGAGTTATATTGTCCAGTGT+GGG | + | chr1.4:34440868-34440887 | MS.gene41278:intron | 35.0% | |
TGCTCTTCATATACAACATG+TGG | - | chr1.4:34444506-34444525 | None:intergenic | 35.0% | |
TGCTGCTCATAGTATAATTC+AGG | + | chr1.4:34445645-34445664 | MS.gene41278:CDS | 35.0% | |
TGTTAAAGAGCTTCCAGATA+AGG | + | chr1.4:34439999-34440018 | MS.gene41278:CDS | 35.0% | |
TGTTTGTTCTTGCAGTTCAA+AGG | + | chr1.4:34439951-34439970 | MS.gene41278:intron | 35.0% | |
TTATTGCCTGAATCCTGAAT+AGG | - | chr1.4:34441700-34441719 | None:intergenic | 35.0% | |
TTGATTGGGTTTCACGATTA+GGG | + | chr1.4:34440423-34440442 | MS.gene41278:intron | 35.0% | |
TTTCTCATCTTCTTTCACTC+AGG | + | chr1.4:34440912-34440931 | MS.gene41278:intron | 35.0% | |
TTTCTGACATATGTTGGAGA+TGG | + | chr1.4:34441397-34441416 | MS.gene41278:intron | 35.0% | |
TTTGATTGGGTTTCACGATT+AGG | + | chr1.4:34440422-34440441 | MS.gene41278:intron | 35.0% | |
TTTGGACATCCTTCTTTCTT+GGG | + | chr1.4:34440810-34440829 | MS.gene41278:intron | 35.0% | |
! | AAAATCTGATGAAAGTGCAG+GGG | + | chr1.4:34444263-34444282 | MS.gene41278:intron | 35.0% |
! | AACCCTTCATGATTGACTTT+GGG | - | chr1.4:34442927-34442946 | None:intergenic | 35.0% |
! | AATAGATCTTATAAGAGCGC+AGG | + | chr1.4:34445080-34445099 | MS.gene41278:intron | 35.0% |
! | AATTAGGGTTTCAGGTGATT+TGG | + | chr1.4:34440369-34440388 | MS.gene41278:intron | 35.0% |
! | ACGTGATAATGAACTTCCAA+AGG | + | chr1.4:34444369-34444388 | MS.gene41278:CDS | 35.0% |
! | ATTAGGGTTTCAGGTGATTT+GGG | + | chr1.4:34440370-34440389 | MS.gene41278:intron | 35.0% |
! | CAAAATCTGATGAAAGTGCA+GGG | + | chr1.4:34444262-34444281 | MS.gene41278:intron | 35.0% |
! | CAAAATCTGATGAAAGTGCA+GGG | - | chr1.4:34444281-34444262 | None:intergenic | 35.0% |
! | CTCTCTTTAAAAAGCTGTAC+AGG | + | chr1.4:34441997-34442016 | MS.gene41278:intron | 35.0% |
! | CTTGGTGCAATTGTAGTTTA+AGG | + | chr1.4:34440264-34440283 | MS.gene41278:intron | 35.0% |
! | GATTTTGTCATGTTTTGTGC+AGG | + | chr1.4:34443751-34443770 | MS.gene41278:intron | 35.0% |
! | GCCAAACAAAAAAAAGTGCA+GGG | - | chr1.4:34443958-34443977 | None:intergenic | 35.0% |
! | GTGTTCATTGATCGATTCAT+AGG | + | chr1.4:34445391-34445410 | MS.gene41278:intron | 35.0% |
! | GTTGTTTGATGTTTGTTAGC+TGG | + | chr1.4:34442567-34442586 | MS.gene41278:intron | 35.0% |
! | GTTTCATTAGTCTAGTGATG+GGG | + | chr1.4:34441852-34441871 | MS.gene41278:intron | 35.0% |
! | TCAGGTTCCATTTCTTTTTG+GGG | + | chr1.4:34443522-34443541 | MS.gene41278:intron | 35.0% |
! | TGCCAAACAAAAAAAAGTGC+AGG | - | chr1.4:34443959-34443978 | None:intergenic | 35.0% |
! | TGTAAAGTGCTAAGACACTA+AGG | - | chr1.4:34440207-34440226 | None:intergenic | 35.0% |
! | TTGATATAGGATCTGGTTCA+TGG | - | chr1.4:34442991-34443010 | None:intergenic | 35.0% |
!! | AGTAAAGGTATCACTTGTCT+AGG | - | chr1.4:34442546-34442565 | None:intergenic | 35.0% |
!! | ATGGGTTTGGTTTGATAGAT+TGG | + | chr1.4:34443274-34443293 | MS.gene41278:intron | 35.0% |
!! | CCAATATTTTTACAAAGGGC+AGG | + | chr1.4:34444121-34444140 | MS.gene41278:intron | 35.0% |
!! | CTACAAAGAAAAGTGTCAAC+AGG | - | chr1.4:34441195-34441214 | None:intergenic | 35.0% |
!! | CTTTCATCAGATTTTGGCAT+TGG | + | chr1.4:34443931-34443950 | MS.gene41278:intron | 35.0% |
!! | CTTTCATCAGATTTTGGCAT+TGG | - | chr1.4:34443950-34443931 | None:intergenic | 35.0% |
!! | TACTGATTTCGATTGAGCTT+TGG | + | chr1.4:34440481-34440500 | MS.gene41278:intron | 35.0% |
!! | TGATTGTTTTTCTTCTGGGA+CGG | + | chr1.4:34442150-34442169 | MS.gene41278:intron | 35.0% |
!! | TGTATATGAAGAGCATTGCA+AGG | + | chr1.4:34444511-34444530 | MS.gene41278:CDS | 35.0% |
!! | TTCAAATTTGCTAAAGGGTG+TGG | - | chr1.4:34441315-34441334 | None:intergenic | 35.0% |
!!! | GGCCACAACATTAGTTTTTA+AGG | - | chr1.4:34442844-34442863 | None:intergenic | 35.0% |
!!! | TCCCTGCACTTTTTTTTGTT+TGG | + | chr1.4:34443954-34443973 | MS.gene41278:intron | 35.0% |
!!! | TTCTCGGAAGGTATTGATTT+TGG | + | chr1.4:34439808-34439827 | MS.gene41278:intron | 35.0% |
AAAGGATTGGAAGTTTGCGT+CGG | + | chr1.4:34439969-34439988 | MS.gene41278:CDS | 40.0% | |
AACGAACCTATTCAGGATTC+AGG | + | chr1.4:34441691-34441710 | MS.gene41278:CDS | 40.0% | |
AAGAGAGATCAAAAGCGAGA+TGG | - | chr1.4:34441984-34442003 | None:intergenic | 40.0% | |
AATAGGTACAATATGTGGCC+TGG | + | chr1.4:34441738-34441757 | MS.gene41278:CDS | 40.0% | |
ACACCCAAAGTCAATCATGA+AGG | + | chr1.4:34442921-34442940 | MS.gene41278:intron | 40.0% | |
ACATTCAGTTGGAGGATTAG+TGG | + | chr1.4:34441630-34441649 | MS.gene41278:CDS | 40.0% | |
AGAATTTGGGTATGGGATGA+TGG | - | chr1.4:34442679-34442698 | None:intergenic | 40.0% | |
AGGTTTGTCTTCTGTGTCAT+GGG | + | chr1.4:34445582-34445601 | MS.gene41278:CDS | 40.0% | |
ATGCTATTGGGAAGCTGTAT+AGG | + | chr1.4:34441659-34441678 | MS.gene41278:CDS | 40.0% | |
ATGTCCAAAGCTTGTCAACT+CGG | - | chr1.4:34440799-34440818 | None:intergenic | 40.0% | |
CAAATCTCTGTCTGCTACTA+CGG | - | chr1.4:34445627-34445646 | None:intergenic | 40.0% | |
CACCCAAAGTCAATCATGAA+GGG | + | chr1.4:34442922-34442941 | MS.gene41278:intron | 40.0% | |
CACCTTCCATATGTGAGATT+TGG | - | chr1.4:34445799-34445818 | None:intergenic | 40.0% | |
CATCGGTAAGGAAAAGATGT+CGG | - | chr1.4:34443606-34443625 | None:intergenic | 40.0% | |
CATTGACCATGACAACAAGA+TGG | - | chr1.4:34439785-34439804 | None:intergenic | 40.0% | |
CGATGGTAGAATCTTGCTTT+AGG | - | chr1.4:34444975-34444994 | None:intergenic | 40.0% | |
CTGAGTTATATTGTCCAGTG+TGG | + | chr1.4:34440867-34440886 | MS.gene41278:intron | 40.0% | |
CTTTGGACATCCTTCTTTCT+TGG | + | chr1.4:34440809-34440828 | MS.gene41278:intron | 40.0% | |
GAATTTGGGTATGGGATGAT+GGG | - | chr1.4:34442678-34442697 | None:intergenic | 40.0% | |
GACCAAATCTCACATATGGA+AGG | + | chr1.4:34445794-34445813 | MS.gene41278:CDS | 40.0% | |
GAGGGTAAAGCCAAATGTTA+GGG | + | chr1.4:34442271-34442290 | MS.gene41278:intron | 40.0% | |
GGAAGAAGAATCAGAGGATT+TGG | - | chr1.4:34439757-34439776 | None:intergenic | 40.0% | |
GGAGGAGAAAGAATGGAAAA+TGG | + | chr1.4:34440515-34440534 | MS.gene41278:intron | 40.0% | |
GGTTATGCTTTACTAGTCAC+AGG | - | chr1.4:34441174-34441193 | None:intergenic | 40.0% | |
GTCATGGTCAATGGAATTCT+CGG | + | chr1.4:34439792-34439811 | MS.gene41278:CDS | 40.0% | |
GTGTCTAAGCATACACTAGA+TGG | + | chr1.4:34440948-34440967 | MS.gene41278:CDS | 40.0% | |
GTTCTTGCAGTTCAAAGGAT+TGG | + | chr1.4:34439956-34439975 | MS.gene41278:intron | 40.0% | |
TAAGCATACACTAGATGGTG+TGG | + | chr1.4:34440953-34440972 | MS.gene41278:CDS | 40.0% | |
TAGTGGCACGATATGCTATT+GGG | + | chr1.4:34441647-34441666 | MS.gene41278:CDS | 40.0% | |
TCTAGCATAGCTTAGTATCC+AGG | + | chr1.4:34441904-34441923 | MS.gene41278:intron | 40.0% | |
TCTTTCACACTGCTCTTACA+TGG | + | chr1.4:34444727-34444746 | MS.gene41278:intron | 40.0% | |
TGATTGCACGCTATGAAACA+TGG | - | chr1.4:34445278-34445297 | None:intergenic | 40.0% | |
TGGGACGGTTTCTCATTATT+AGG | + | chr1.4:34442165-34442184 | MS.gene41278:intron | 40.0% | |
TGGGTTCCGAATCATATGTT+CGG | - | chr1.4:34445055-34445074 | None:intergenic | 40.0% | |
TTACGAAATTCATTGCCTCC+AGG | - | chr1.4:34441759-34441778 | None:intergenic | 40.0% | |
TTAGTGGCACGATATGCTAT+TGG | + | chr1.4:34441646-34441665 | MS.gene41278:CDS | 40.0% | |
TTCGTTTACTCGGAATTCGA+CGG | + | chr1.4:34440700-34440719 | MS.gene41278:intron | 40.0% | |
TTGGACAATAGAGTCATGCA+TGG | + | chr1.4:34445487-34445506 | MS.gene41278:intron | 40.0% | |
TTGGACATCCTTCTTTCTTG+GGG | + | chr1.4:34440811-34440830 | MS.gene41278:intron | 40.0% | |
! | ATTTGGAACTCCAAACATCG+CGG | - | chr1.4:34439740-34439759 | None:intergenic | 40.0% |
! | CAACCCTTCATGATTGACTT+TGG | - | chr1.4:34442928-34442947 | None:intergenic | 40.0% |
! | CATCTTGTTGTCATGGTCAA+TGG | + | chr1.4:34439783-34439802 | MS.gene41278:CDS | 40.0% |
! | CCAAAATCTGATGAAAGTGC+AGG | + | chr1.4:34444261-34444280 | MS.gene41278:intron | 40.0% |
! | CCAAAATCTGATGAAAGTGC+AGG | - | chr1.4:34444280-34444261 | None:intergenic | 40.0% |
! | CCTGCACTTTCATCAGATTT+TGG | + | chr1.4:34443925-34443944 | MS.gene41278:intron | 40.0% |
! | CCTGCACTTTCATCAGATTT+TGG | - | chr1.4:34443944-34443925 | None:intergenic | 40.0% |
! | GAAAGTAAGGTGGACTCAAT+AGG | + | chr1.4:34441721-34441740 | MS.gene41278:CDS | 40.0% |
! | GTGATTTGGGTTTCACGATT+GGG | + | chr1.4:34440383-34440402 | MS.gene41278:intron | 40.0% |
! | TCCTCTGCAAGTTTTCATTC+CGG | - | chr1.4:34445553-34445572 | None:intergenic | 40.0% |
! | TTGAAGTATCTGGGCTTCAT+TGG | + | chr1.4:34441330-34441349 | MS.gene41278:intron | 40.0% |
!! | AATGGCTCTGACAAGATAGA+AGG | + | chr1.4:34444569-34444588 | MS.gene41278:CDS | 40.0% |
!! | GTATGGGATGATGGGAATTA+AGG | - | chr1.4:34442670-34442689 | None:intergenic | 40.0% |
AACTGTTGCTACACCTCATC+TGG | + | chr1.4:34441777-34441796 | MS.gene41278:CDS | 45.0% | |
AAGCAGCACGTTCATCTCTA+TGG | + | chr1.4:34443381-34443400 | MS.gene41278:intron | 45.0% | |
AATGAGTGTCCTCTGTAGTC+TGG | + | chr1.4:34441928-34441947 | MS.gene41278:intron | 45.0% | |
ACCGGAATGAAAACTTGCAG+AGG | + | chr1.4:34445549-34445568 | MS.gene41278:intron | 45.0% | |
ACCTGGAAACGAACCTATTC+AGG | + | chr1.4:34441684-34441703 | MS.gene41278:CDS | 45.0% | |
ACTAGATGGTGTGGACGTAA+TGG | + | chr1.4:34440962-34440981 | MS.gene41278:CDS | 45.0% | |
ACTGTTGCTACACCTCATCT+GGG | + | chr1.4:34441778-34441797 | MS.gene41278:CDS | 45.0% | |
AGAGTATATCGTGAGGGGTT+AGG | - | chr1.4:34443189-34443208 | None:intergenic | 45.0% | |
AGGTTTGCCTTCATCGTCAT+CGG | - | chr1.4:34443623-34443642 | None:intergenic | 45.0% | |
ATGAAAACTTGCAGAGGAGC+TGG | + | chr1.4:34445555-34445574 | MS.gene41278:intron | 45.0% | |
ATTACATACAGAGCCCACAC+TGG | - | chr1.4:34440884-34440903 | None:intergenic | 45.0% | |
ATTGCGCTCTTTCAAACGTC+GGG | + | chr1.4:34443779-34443798 | MS.gene41278:CDS | 45.0% | |
CAAAAGCGAGATGGAAAAGC+TGG | - | chr1.4:34441975-34441994 | None:intergenic | 45.0% | |
CAGGTTTGTCTTCTGTGTCA+TGG | + | chr1.4:34445581-34445600 | MS.gene41278:CDS | 45.0% | |
CATTACACACCAGACTACAG+AGG | - | chr1.4:34441940-34441959 | None:intergenic | 45.0% | |
CATTGCGCTCTTTCAAACGT+CGG | + | chr1.4:34443778-34443797 | MS.gene41278:CDS | 45.0% | |
CGCATGGTTGAAGACTATGA+TGG | + | chr1.4:34443655-34443674 | MS.gene41278:CDS | 45.0% | |
CTAGATGGTGTGGACGTAAT+GGG | + | chr1.4:34440963-34440982 | MS.gene41278:CDS | 45.0% | |
GAAGAACGATGTGTGCACAT+CGG | + | chr1.4:34439698-34439717 | MS.gene41278:CDS | 45.0% | |
GACCATGACAACAAGATGGT+CGG | - | chr1.4:34439781-34439800 | None:intergenic | 45.0% | |
GCAGCTACCCCAAAAAGAAA+TGG | - | chr1.4:34443532-34443551 | None:intergenic | 45.0% | |
GGAGGGTAAAGCCAAATGTT+AGG | + | chr1.4:34442270-34442289 | MS.gene41278:intron | 45.0% | |
GTACGATGGAGGAGAAAGAA+TGG | + | chr1.4:34440508-34440527 | MS.gene41278:intron | 45.0% | |
TAATGTTGTGGCCACAATCG+TGG | + | chr1.4:34442851-34442870 | MS.gene41278:intron | 45.0% | |
TACAGAGGACACTCATTACC+TGG | - | chr1.4:34441925-34441944 | None:intergenic | 45.0% | |
TCAACCATGCGTTTGAGCAA+TGG | - | chr1.4:34443646-34443665 | None:intergenic | 45.0% | |
TCCTGAATAGGTTCGTTTCC+AGG | - | chr1.4:34441688-34441707 | None:intergenic | 45.0% | |
TGAATAGGTTCGTTTCCAGG+TGG | - | chr1.4:34441685-34441704 | None:intergenic | 45.0% | |
TGAGGGGTTAGGTAGTCAAT+TGG | - | chr1.4:34443178-34443197 | None:intergenic | 45.0% | |
TGGTCAATGGAATTCTCGGA+AGG | + | chr1.4:34439796-34439815 | MS.gene41278:CDS | 45.0% | |
TTCCTTACCGATGACGATGA+AGG | + | chr1.4:34443613-34443632 | MS.gene41278:CDS | 45.0% | |
! | AGTCAATTGGTCTGAGCCAA+GGG | - | chr1.4:34443165-34443184 | None:intergenic | 45.0% |
! | GGTGATTTGGGTTTCACGAT+TGG | + | chr1.4:34440382-34440401 | MS.gene41278:intron | 45.0% |
! | TAGTCAATTGGTCTGAGCCA+AGG | - | chr1.4:34443166-34443185 | None:intergenic | 45.0% |
!! | ATATTGGTATTGGTGCCACG+TGG | - | chr1.4:34444077-34444096 | None:intergenic | 45.0% |
!! | TATGTTTGGTTGGTAGTGGG+AGG | + | chr1.4:34444460-34444479 | MS.gene41278:intron | 45.0% |
ACCATGCGTTTGAGCAATGG+AGG | - | chr1.4:34443643-34443662 | None:intergenic | 50.0% | |
ACCTCCAACTCCTTATCCCT+TGG | + | chr1.4:34443146-34443165 | MS.gene41278:intron | 50.0% | |
ACCTCCATTGCTCAAACGCA+TGG | + | chr1.4:34443639-34443658 | MS.gene41278:CDS | 50.0% | |
AGGTACAATATGTGGCCTGG+AGG | + | chr1.4:34441741-34441760 | MS.gene41278:CDS | 50.0% | |
ATTCGTCCGTAGTTGAACCC+TGG | + | chr1.4:34443123-34443142 | MS.gene41278:intron | 50.0% | |
CATGACAACAAGATGGTCGG+CGG | - | chr1.4:34439778-34439797 | None:intergenic | 50.0% | |
CCACGTGGCGTGAAATGATT+GGG | - | chr1.4:34444062-34444081 | None:intergenic | 50.0% | |
CTGTTGCTACACCTCATCTG+GGG | + | chr1.4:34441779-34441798 | MS.gene41278:CDS | 50.0% | |
GACATCCTTCTTTCTTGGGG+AGG | + | chr1.4:34440814-34440833 | MS.gene41278:intron | 50.0% | |
GATAAGGAGTTGGAGGTCCA+GGG | - | chr1.4:34443143-34443162 | None:intergenic | 50.0% | |
TCAAGCCTCCCCAAGAAAGA+AGG | - | chr1.4:34440822-34440841 | None:intergenic | 50.0% | |
TCACACTGCTCTTACATGGC+TGG | + | chr1.4:34444731-34444750 | MS.gene41278:intron | 50.0% | |
TGAGCCAAGGGATAAGGAGT+TGG | - | chr1.4:34443153-34443172 | None:intergenic | 50.0% | |
TGCCTTCATCGTCATCGGTA+AGG | - | chr1.4:34443618-34443637 | None:intergenic | 50.0% | |
TTGGTCTGAGCCAAGGGATA+AGG | - | chr1.4:34443159-34443178 | None:intergenic | 50.0% | |
! | AAAACTAACGGAGTGCCACG+TGG | + | chr1.4:34444036-34444055 | MS.gene41278:intron | 50.0% |
! | GATGAAAGTGCAGGGGCTAA+AGG | + | chr1.4:34444270-34444289 | MS.gene41278:intron | 50.0% |
! | GCAACCGAGTTGACAAGCTT+TGG | + | chr1.4:34440792-34440811 | MS.gene41278:intron | 50.0% |
! | TACACCTCATCTGGGGTCAA+GGG | + | chr1.4:34441786-34441805 | MS.gene41278:CDS | 50.0% |
!! | TGAGCTTTGGAGCTGTACGA+TGG | + | chr1.4:34440494-34440513 | MS.gene41278:intron | 50.0% |
AACATCGCGGCTTCCATCGA+CGG | - | chr1.4:34439727-34439746 | None:intergenic | 55.0% | |
AAGGTCCGCAACCACGATTG+TGG | - | chr1.4:34442865-34442884 | None:intergenic | 55.0% | |
AATGGGCGAGAGATTGGCAG+AGG | + | chr1.4:34440980-34440999 | MS.gene41278:CDS | 55.0% | |
ACTGACACGCTCGATCTGGA+CGG | + | chr1.4:34440298-34440317 | MS.gene41278:intron | 55.0% | |
CCCAATCATTTCACGCCACG+TGG | + | chr1.4:34444059-34444078 | MS.gene41278:intron | 55.0% | |
CGTGAAATGATTGGGCCACG+TGG | - | chr1.4:34444054-34444073 | None:intergenic | 55.0% | |
CTTCACTGACACGCTCGATC+TGG | + | chr1.4:34440294-34440313 | MS.gene41278:intron | 55.0% | |
CTTGCAGAGGAGCTGGTAAC+AGG | + | chr1.4:34445562-34445581 | MS.gene41278:intron | 55.0% | |
GCCAAGGGATAAGGAGTTGG+AGG | - | chr1.4:34443150-34443169 | None:intergenic | 55.0% | |
GCCACGTGGCGTGAAATGAT+TGG | - | chr1.4:34444063-34444082 | None:intergenic | 55.0% | |
GGAGGTCCAGGGTTCAACTA+CGG | - | chr1.4:34443132-34443151 | None:intergenic | 55.0% | |
GGATAAGGAGTTGGAGGTCC+AGG | - | chr1.4:34443144-34443163 | None:intergenic | 55.0% | |
GGGGTCAAGGGGAAATAAGC+AGG | + | chr1.4:34441798-34441817 | MS.gene41278:CDS | 55.0% | |
GTCGGCGGAAGAAGAATCAG+AGG | - | chr1.4:34439763-34439782 | None:intergenic | 55.0% | |
TCGATGGAAGCCGCGATGTT+TGG | + | chr1.4:34439727-34439746 | MS.gene41278:CDS | 55.0% | |
TGCACATCGGAATCCGTCGA+TGG | + | chr1.4:34439711-34439730 | MS.gene41278:CDS | 55.0% | |
TGTGGCCACAATCGTGGTTG+CGG | + | chr1.4:34442857-34442876 | MS.gene41278:intron | 55.0% | |
TTTCCCCTTGACCCCAGATG+AGG | - | chr1.4:34441793-34441812 | None:intergenic | 55.0% | |
! | ACACCTCATCTGGGGTCAAG+GGG | + | chr1.4:34441787-34441806 | MS.gene41278:CDS | 55.0% |
! | CGCCGACCATCTTGTTGTCA+TGG | + | chr1.4:34439776-34439795 | MS.gene41278:CDS | 55.0% |
! | CTACACCTCATCTGGGGTCA+AGG | + | chr1.4:34441785-34441804 | MS.gene41278:CDS | 55.0% |
!! | GCTTTGGAGCTGTACGATGG+AGG | + | chr1.4:34440497-34440516 | MS.gene41278:intron | 55.0% |
!! | GGACGTAATGGGCGAGAGAT+TGG | + | chr1.4:34440974-34440993 | MS.gene41278:CDS | 55.0% |
CACGCTCGATCTGGACGGTT+TGG | + | chr1.4:34440303-34440322 | MS.gene41278:intron | 60.0% | |
GGGAAGCTGTATAGGCCACC+TGG | + | chr1.4:34441667-34441686 | MS.gene41278:CDS | 60.0% | |
GGGCGAGAGATTGGCAGAGG+AGG | + | chr1.4:34440983-34441002 | MS.gene41278:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 34439693 | 34445859 | 34439693 | ID=MS.gene41278 |
chr1.4 | mRNA | 34439693 | 34445859 | 34439693 | ID=MS.gene41278.t1;Parent=MS.gene41278 |
chr1.4 | exon | 34439693 | 34439817 | 34439693 | ID=MS.gene41278.t1.exon1;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34439693 | 34439817 | 34439693 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34439966 | 34440033 | 34439966 | ID=MS.gene41278.t1.exon2;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34439966 | 34440033 | 34439966 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34440934 | 34441004 | 34440934 | ID=MS.gene41278.t1.exon3;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34440934 | 34441004 | 34440934 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34441577 | 34441819 | 34441577 | ID=MS.gene41278.t1.exon4;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34441577 | 34441819 | 34441577 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34443526 | 34443689 | 34443526 | ID=MS.gene41278.t1.exon5;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34443526 | 34443689 | 34443526 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34443773 | 34443828 | 34443773 | ID=MS.gene41278.t1.exon6;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34443773 | 34443828 | 34443773 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34444338 | 34444390 | 34444338 | ID=MS.gene41278.t1.exon7;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34444338 | 34444390 | 34444338 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34444476 | 34444590 | 34444476 | ID=MS.gene41278.t1.exon8;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34444476 | 34444590 | 34444476 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34445569 | 34445666 | 34445569 | ID=MS.gene41278.t1.exon9;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34445569 | 34445666 | 34445569 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
chr1.4 | exon | 34445788 | 34445859 | 34445788 | ID=MS.gene41278.t1.exon10;Parent=MS.gene41278.t1 |
chr1.4 | CDS | 34445788 | 34445859 | 34445788 | ID=cds.MS.gene41278.t1;Parent=MS.gene41278.t1 |
Gene Sequence |
Protein sequence |