Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056272.t1 | XP_003589014.1 | 83.9 | 322 | 47 | 2 | 1 | 318 | 1 | 321 | 1.20E-152 | 549.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056272.t1 | Q9FFJ8 | 24.8 | 311 | 204 | 6 | 15 | 318 | 160 | 447 | 2.7e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056272.t1 | G7IB81 | 83.9 | 322 | 47 | 2 | 1 | 318 | 1 | 321 | 8.7e-153 | 549.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene056272 | 0.805038 | 1.62E-49 | -1.69E-46 |
| MS.gene052447 | MS.gene056272 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene056272 | 0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene057598 | 0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene058279 | 0.800975 | 1.12E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene060634 | -0.800722 | 1.26E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene062165 | 0.811369 | 7.25E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene06372 | 0.807006 | 6.24E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene065039 | 0.8094 | 1.93E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene065820 | 0.806861 | 6.70E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene065904 | 0.806914 | 6.53E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene066021 | 0.802725 | 4.90E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene066313 | 0.828947 | 6.77E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene067208 | 0.809408 | 1.92E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene068924 | 0.812974 | 3.24E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene070582 | 0.822041 | 2.93E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene070616 | 0.829124 | 6.13E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene070818 | 0.823547 | 1.31E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene073334 | 0.820669 | 6.07E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene073727 | 0.811624 | 6.38E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene07394 | 0.829999 | 3.76E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene09532 | 0.804426 | 2.17E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene21334 | 0.801325 | 9.50E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene25860 | 0.832007 | 1.21E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene26062 | 0.815139 | 1.08E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene26939 | 0.819525 | 1.11E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene28198 | 0.803672 | 3.12E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene29009 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene29850 | 0.816691 | 4.85E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene29920 | 0.832437 | 9.46E-56 | -1.69E-46 |
| MS.gene056272 | MS.gene29921 | 0.829455 | 5.10E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene30970 | 0.809795 | 1.59E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene31142 | 0.81375 | 2.19E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene31855 | 0.82777 | 1.30E-54 | -1.69E-46 |
| MS.gene056272 | MS.gene33651 | 0.82723 | 1.75E-54 | -1.69E-46 |
| MS.gene056272 | MS.gene37282 | -0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene37612 | 0.823529 | 1.32E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene38659 | 0.815446 | 9.20E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene39074 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene40320 | 0.808661 | 2.78E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene41278 | 0.815226 | 1.03E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene41990 | 0.812584 | 3.94E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene42142 | 0.8488 | 4.87E-60 | -1.69E-46 |
| MS.gene056272 | MS.gene43946 | 0.811391 | 7.17E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene44058 | 0.812993 | 3.21E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene44256 | 0.811585 | 6.51E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene44259 | -0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene45507 | 0.809896 | 1.51E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene45861 | 0.929065 | 1.19E-92 | -1.69E-46 |
| MS.gene056272 | MS.gene47088 | 0.801816 | 7.53E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene47552 | 0.834956 | 2.22E-56 | -1.69E-46 |
| MS.gene056272 | MS.gene48526 | 0.8005 | 1.40E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene49354 | 0.804283 | 2.33E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene49642 | 0.842089 | 3.20E-58 | -1.69E-46 |
| MS.gene056272 | MS.gene49643 | 0.835855 | 1.32E-56 | -1.69E-46 |
| MS.gene056272 | MS.gene49651 | 0.810572 | 1.08E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene49876 | 0.804654 | 1.95E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene50001 | 0.83081 | 2.38E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene50323 | 0.812117 | 4.98E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene50571 | 0.804797 | 1.82E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene52357 | 0.803942 | 2.74E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene53535 | 0.829496 | 4.98E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene56755 | 0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene56807 | -0.841477 | 4.64E-58 | -1.69E-46 |
| MS.gene056272 | MS.gene56889 | 0.826533 | 2.58E-54 | -1.69E-46 |
| MS.gene056272 | MS.gene56925 | 0.808836 | 2.55E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene58248 | 0.801121 | 1.05E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene58284 | 0.812031 | 5.20E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene58589 | 0.984107 | 1.32E-159 | -1.69E-46 |
| MS.gene056272 | MS.gene59540 | 0.845196 | 4.72E-59 | -1.69E-46 |
| MS.gene056272 | MS.gene61393 | 0.829022 | 6.50E-55 | -1.69E-46 |
| MS.gene056272 | MS.gene61413 | 0.817282 | 3.58E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene61551 | 0.811295 | 7.52E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene62738 | 0.819688 | 1.02E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene63897 | 0.810923 | 9.05E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene63984 | 0.806232 | 9.09E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene66412 | 0.826874 | 2.13E-54 | -1.69E-46 |
| MS.gene056272 | MS.gene68653 | 0.814168 | 1.77E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene68654 | 0.821144 | 4.72E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene68712 | 0.811229 | 7.77E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene70396 | 0.832539 | 8.92E-56 | -1.69E-46 |
| MS.gene056272 | MS.gene70656 | 0.803415 | 3.52E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene73467 | 0.838813 | 2.30E-57 | -1.69E-46 |
| MS.gene056272 | MS.gene75887 | 0.811936 | 5.46E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene75963 | 0.803032 | 4.23E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene76750 | 0.821453 | 4.00E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene76755 | 0.82625 | 3.01E-54 | -1.69E-46 |
| MS.gene056272 | MS.gene77015 | 0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene78362 | 0.821075 | 4.90E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene78453 | 0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene78473 | -0.810381 | 1.19E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene80631 | 0.806205 | 9.21E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene80877 | 0.815289 | 9.98E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene81047 | 0.805842 | 1.10E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene81366 | 0.803385 | 3.57E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene82614 | 0.800854 | 1.19E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene84375 | 0.815897 | 7.30E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene84994 | 0.822391 | 2.43E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene87673 | 0.813667 | 2.28E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene88147 | 0.804679 | 1.92E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene89154 | 0.806612 | 7.56E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene89344 | 0.800624 | 1.32E-48 | -1.69E-46 |
| MS.gene056272 | MS.gene89666 | 0.826039 | 3.38E-54 | -1.69E-46 |
| MS.gene056272 | MS.gene90651 | 0.815747 | 7.89E-52 | -1.69E-46 |
| MS.gene056272 | MS.gene91008 | 0.809517 | 1.82E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene91475 | 0.837592 | 4.75E-57 | -1.69E-46 |
| MS.gene056272 | MS.gene93432 | 0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene93764 | 0.807365 | 5.24E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene93902 | 0.834244 | 3.35E-56 | -1.69E-46 |
| MS.gene056272 | MS.gene95778 | 0.802617 | 5.15E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene96324 | 0.851793 | 7.04E-61 | -1.69E-46 |
| MS.gene056272 | MS.gene96613 | 0.813986 | 1.94E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene96684 | 0.80271 | 4.93E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene96992 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene97534 | 0.823844 | 1.11E-53 | -1.69E-46 |
| MS.gene056272 | MS.gene98179 | 0.807452 | 5.02E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene99435 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene056272 | MS.gene99849 | 0.814616 | 1.41E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056272.t1 | MTR_1g016370 | 90.373 | 322 | 26 | 2 | 1 | 318 | 1 | 321 | 0.0 | 590 |
| MS.gene056272.t1 | MTR_4g061370 | 86.646 | 322 | 20 | 3 | 1 | 318 | 1013 | 1315 | 0.0 | 538 |
| MS.gene056272.t1 | MTR_5g055390 | 75.817 | 306 | 26 | 3 | 17 | 318 | 20 | 281 | 1.14e-155 | 437 |
| MS.gene056272.t1 | MTR_8g054100 | 89.496 | 238 | 17 | 2 | 1 | 234 | 1 | 234 | 2.07e-144 | 407 |
| MS.gene056272.t1 | MTR_2g018710 | 62.654 | 324 | 111 | 5 | 2 | 317 | 1 | 322 | 2.02e-140 | 400 |
| MS.gene056272.t1 | MTR_2g086350 | 62.346 | 324 | 112 | 5 | 2 | 317 | 1 | 322 | 3.39e-139 | 397 |
| MS.gene056272.t1 | MTR_1g080080 | 62.037 | 324 | 113 | 5 | 2 | 317 | 1 | 322 | 4.55e-139 | 397 |
| MS.gene056272.t1 | MTR_3g110155 | 57.012 | 328 | 130 | 3 | 1 | 317 | 1 | 328 | 2.85e-128 | 369 |
| MS.gene056272.t1 | MTR_8g006585 | 57.012 | 328 | 130 | 3 | 1 | 317 | 1 | 328 | 2.85e-128 | 369 |
| MS.gene056272.t1 | MTR_8g006695 | 57.012 | 328 | 130 | 3 | 1 | 317 | 1 | 328 | 2.85e-128 | 369 |
| MS.gene056272.t1 | MTR_5g054570 | 58.642 | 324 | 106 | 6 | 2 | 317 | 1 | 304 | 2.56e-125 | 361 |
| MS.gene056272.t1 | MTR_2g435870 | 55.556 | 306 | 107 | 4 | 19 | 317 | 5 | 288 | 6.71e-116 | 337 |
| MS.gene056272.t1 | MTR_4g046743 | 50.774 | 323 | 102 | 6 | 2 | 317 | 1 | 273 | 3.38e-98 | 291 |
| MS.gene056272.t1 | MTR_2g054730 | 83.803 | 142 | 19 | 1 | 181 | 318 | 11 | 152 | 2.61e-74 | 226 |
| MS.gene056272.t1 | MTR_2g436180 | 48.684 | 228 | 73 | 4 | 100 | 317 | 1 | 194 | 1.18e-61 | 195 |
| MS.gene056272.t1 | MTR_7g029320 | 44.487 | 263 | 81 | 7 | 2 | 257 | 1 | 205 | 1.01e-57 | 185 |
| MS.gene056272.t1 | MTR_3g023200 | 84.706 | 85 | 13 | 0 | 1 | 85 | 1 | 85 | 3.00e-46 | 152 |
| MS.gene056272.t1 | MTR_2g436540 | 41.629 | 221 | 107 | 7 | 119 | 317 | 10 | 230 | 2.87e-43 | 149 |
| MS.gene056272.t1 | MTR_3g448480 | 49.686 | 159 | 48 | 4 | 9 | 164 | 8 | 137 | 1.11e-39 | 136 |
| MS.gene056272.t1 | MTR_0961s0020 | 70.930 | 86 | 22 | 2 | 122 | 206 | 5 | 88 | 4.43e-32 | 115 |
| MS.gene056272.t1 | MTR_1g073440 | 39.437 | 142 | 85 | 1 | 21 | 161 | 15 | 156 | 4.44e-30 | 116 |
| MS.gene056272.t1 | MTR_4g043620 | 39.375 | 160 | 93 | 2 | 2 | 161 | 1 | 156 | 3.67e-29 | 114 |
| MS.gene056272.t1 | MTR_8g105430 | 34.595 | 185 | 107 | 3 | 12 | 183 | 31 | 214 | 2.27e-28 | 110 |
| MS.gene056272.t1 | MTR_5g018260 | 29.299 | 314 | 192 | 9 | 22 | 311 | 16 | 323 | 1.14e-26 | 107 |
| MS.gene056272.t1 | MTR_8g468830 | 27.508 | 309 | 203 | 8 | 21 | 315 | 14 | 315 | 3.68e-26 | 106 |
| MS.gene056272.t1 | MTR_8g069895 | 35.465 | 172 | 107 | 2 | 2 | 173 | 1 | 168 | 6.17e-26 | 105 |
| MS.gene056272.t1 | MTR_3g070080 | 28.852 | 305 | 159 | 8 | 12 | 307 | 436 | 691 | 1.01e-25 | 107 |
| MS.gene056272.t1 | MTR_3g070080 | 38.158 | 152 | 85 | 2 | 22 | 173 | 248 | 390 | 2.67e-25 | 106 |
| MS.gene056272.t1 | MTR_3g070080 | 36.567 | 134 | 78 | 2 | 11 | 144 | 66 | 192 | 2.94e-18 | 85.9 |
| MS.gene056272.t1 | MTR_3g070080 | 28.852 | 305 | 159 | 8 | 12 | 307 | 373 | 628 | 1.29e-25 | 107 |
| MS.gene056272.t1 | MTR_3g070080 | 38.158 | 152 | 85 | 2 | 22 | 173 | 185 | 327 | 2.99e-25 | 106 |
| MS.gene056272.t1 | MTR_3g070080 | 36.567 | 134 | 78 | 2 | 11 | 144 | 3 | 129 | 3.77e-18 | 85.5 |
| MS.gene056272.t1 | MTR_5g022570 | 28.094 | 299 | 181 | 6 | 19 | 308 | 17 | 290 | 6.30e-25 | 102 |
| MS.gene056272.t1 | MTR_2g021280 | 35.000 | 160 | 100 | 2 | 2 | 161 | 1 | 156 | 5.53e-23 | 98.6 |
| MS.gene056272.t1 | MTR_7g056530 | 64.516 | 62 | 22 | 0 | 103 | 164 | 28 | 89 | 8.83e-22 | 88.6 |
| MS.gene056272.t1 | MTR_4g045750 | 59.259 | 81 | 30 | 2 | 138 | 217 | 60 | 138 | 1.38e-20 | 86.7 |
| MS.gene056272.t1 | MTR_7g034425 | 53.247 | 77 | 35 | 1 | 12 | 87 | 85 | 161 | 5.03e-20 | 85.9 |
| MS.gene056272.t1 | MTR_0693s0050 | 39.189 | 148 | 78 | 5 | 18 | 158 | 5 | 147 | 9.39e-20 | 87.4 |
| MS.gene056272.t1 | MTR_1g055365 | 30.147 | 136 | 94 | 1 | 21 | 156 | 21 | 155 | 7.37e-16 | 78.6 |
| MS.gene056272.t1 | MTR_1g055365 | 28.966 | 145 | 100 | 2 | 2 | 146 | 175 | 316 | 4.77e-15 | 76.3 |
| MS.gene056272.t1 | MTR_4g029080 | 41.975 | 81 | 47 | 0 | 81 | 161 | 2 | 82 | 4.98e-15 | 70.1 |
| MS.gene056272.t1 | MTR_7g105890 | 37.391 | 115 | 61 | 4 | 18 | 127 | 5 | 113 | 5.52e-14 | 72.0 |
| MS.gene056272.t1 | MTR_4g128540 | 37.391 | 115 | 61 | 4 | 18 | 127 | 5 | 113 | 1.01e-13 | 71.2 |
| MS.gene056272.t1 | MTR_8g085310 | 25.424 | 295 | 185 | 10 | 25 | 306 | 434 | 706 | 1.50e-13 | 71.6 |
| MS.gene056272.t1 | MTR_3g053640 | 25.606 | 289 | 168 | 10 | 25 | 306 | 182 | 430 | 3.41e-13 | 70.1 |
| MS.gene056272.t1 | MTR_4g128327 | 39.796 | 98 | 49 | 3 | 27 | 119 | 14 | 106 | 4.35e-13 | 65.5 |
| MS.gene056272.t1 | MTR_8g446440 | 24.498 | 249 | 157 | 8 | 81 | 315 | 2 | 233 | 4.72e-13 | 68.2 |
| MS.gene056272.t1 | MTR_1g024830 | 23.510 | 302 | 199 | 8 | 19 | 307 | 59 | 341 | 1.40e-12 | 68.2 |
| MS.gene056272.t1 | MTR_4g092300 | 24.917 | 301 | 175 | 11 | 25 | 306 | 556 | 824 | 2.99e-12 | 67.8 |
| MS.gene056272.t1 | MTR_4g051480 | 24.917 | 301 | 175 | 11 | 25 | 306 | 574 | 842 | 3.36e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056272.t1 | AT5G05800 | 25.633 | 316 | 208 | 7 | 6 | 318 | 156 | 447 | 3.44e-24 | 102 |
| MS.gene056272.t1 | AT5G05800 | 36.036 | 111 | 70 | 1 | 20 | 130 | 2 | 111 | 1.98e-16 | 80.1 |
| MS.gene056272.t1 | AT5G05800 | 25.633 | 316 | 208 | 7 | 6 | 318 | 156 | 447 | 3.44e-24 | 102 |
| MS.gene056272.t1 | AT5G05800 | 36.036 | 111 | 70 | 1 | 20 | 130 | 2 | 111 | 1.98e-16 | 80.1 |
| MS.gene056272.t1 | AT5G05800 | 25.633 | 316 | 208 | 7 | 6 | 318 | 156 | 447 | 3.44e-24 | 102 |
| MS.gene056272.t1 | AT5G05800 | 36.036 | 111 | 70 | 1 | 20 | 130 | 2 | 111 | 1.98e-16 | 80.1 |
| MS.gene056272.t1 | AT5G05800 | 25.633 | 316 | 208 | 7 | 6 | 318 | 156 | 447 | 3.44e-24 | 102 |
| MS.gene056272.t1 | AT5G05800 | 36.036 | 111 | 70 | 1 | 20 | 130 | 2 | 111 | 1.98e-16 | 80.1 |
| MS.gene056272.t1 | AT5G05800 | 25.633 | 316 | 208 | 7 | 6 | 318 | 156 | 447 | 3.44e-24 | 102 |
| MS.gene056272.t1 | AT5G05800 | 36.036 | 111 | 70 | 1 | 20 | 130 | 2 | 111 | 1.98e-16 | 80.1 |
| MS.gene056272.t1 | AT3G11290 | 25.902 | 305 | 189 | 7 | 20 | 306 | 163 | 448 | 3.58e-19 | 88.2 |
| MS.gene056272.t1 | AT3G11290 | 25.902 | 305 | 189 | 7 | 20 | 306 | 163 | 448 | 3.58e-19 | 88.2 |
| MS.gene056272.t1 | AT2G24960 | 29.927 | 137 | 95 | 1 | 8 | 144 | 155 | 290 | 1.28e-15 | 78.2 |
| MS.gene056272.t1 | AT2G24960 | 26.667 | 135 | 98 | 1 | 20 | 154 | 10 | 143 | 9.83e-11 | 63.2 |
| MS.gene056272.t1 | AT2G24960 | 29.927 | 137 | 95 | 1 | 8 | 144 | 155 | 290 | 1.41e-15 | 77.8 |
| MS.gene056272.t1 | AT2G24960 | 27.972 | 143 | 102 | 1 | 12 | 154 | 314 | 455 | 4.44e-12 | 67.4 |
| MS.gene056272.t1 | AT3G11310 | 33.566 | 143 | 89 | 2 | 20 | 157 | 171 | 312 | 4.68e-13 | 70.1 |
| MS.gene056272.t1 | AT2G19220 | 26.032 | 315 | 199 | 11 | 9 | 313 | 149 | 439 | 4.89e-12 | 66.6 |
| MS.gene056272.t1 | AT4G02210 | 27.673 | 159 | 113 | 2 | 13 | 170 | 2 | 159 | 7.06e-11 | 63.2 |
| MS.gene056272.t1 | AT4G02210 | 27.673 | 159 | 113 | 2 | 13 | 170 | 2 | 159 | 7.06e-11 | 63.2 |
Find 75 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGCATGGTATAACTTATT+TGG | 0.134716 | 1.3:-76758255 | MS.gene056272:CDS |
| ACAACTGAATTTGGAAATAT+TGG | 0.148866 | 1.3:-76757852 | MS.gene056272:CDS |
| GTTGGAGCAACAACTGAATT+TGG | 0.213211 | 1.3:-76757861 | MS.gene056272:CDS |
| GGCAGAAAACAAAAGCTAAT+TGG | 0.275009 | 1.3:-76758464 | MS.gene056272:CDS |
| AACTTATTTGGGAGAGAAAC+TGG | 0.287945 | 1.3:-76758243 | MS.gene056272:CDS |
| TTGGGAGAGAAACTGGATTA+GGG | 0.298488 | 1.3:-76758236 | MS.gene056272:CDS |
| TTTGGGAGAGAAACTGGATT+AGG | 0.315464 | 1.3:-76758237 | MS.gene056272:CDS |
| GAAATAAACATCTCCCTTGC+AGG | 0.323302 | 1.3:+76757573 | None:intergenic |
| AAACTTTGTGAAAGCATGTT+TGG | 0.334075 | 1.3:-76758424 | MS.gene056272:CDS |
| GTCCGGTTAAATTATGAAAT+CGG | 0.352053 | 1.3:+76758334 | None:intergenic |
| TGTATTACATACCAGTTGTT+TGG | 0.352266 | 1.3:+76758164 | None:intergenic |
| CAACTGAATTTGGAAATATT+GGG | 0.356640 | 1.3:-76757851 | MS.gene056272:CDS |
| GAGCATGGTATAACTTATTT+GGG | 0.363157 | 1.3:-76758254 | MS.gene056272:CDS |
| TTCAAGGATGTAGTGGCTAA+TGG | 0.366838 | 1.3:-76758002 | MS.gene056272:CDS |
| CAGAGGAGAAGAGGTTGAAT+TGG | 0.373243 | 1.3:-76757539 | MS.gene056272:CDS |
| GTCCGATTTCATAATTTAAC+CGG | 0.374307 | 1.3:-76758336 | MS.gene056272:CDS |
| TTGGTCTCCCACCACTCATC+AGG | 0.410369 | 1.3:+76758183 | None:intergenic |
| GCAGAAAACAAAAGCTAATT+GGG | 0.414370 | 1.3:-76758463 | MS.gene056272:CDS |
| GTTCCTCCTCACCTAGTGAT+GGG | 0.415978 | 1.3:-76758488 | MS.gene056272:CDS |
| GAAAAGTGTGGTTAACTCAT+TGG | 0.420206 | 1.3:+76758022 | None:intergenic |
| AAAAGGGTGGACAAATATTA+GGG | 0.422862 | 1.3:-76758358 | MS.gene056272:CDS |
| ATGATCTTTATTTGCATGCT+CGG | 0.426517 | 1.3:-76757620 | MS.gene056272:CDS |
| GGTTCCTCCTCACCTAGTGA+TGG | 0.438340 | 1.3:-76758489 | MS.gene056272:CDS |
| TTCCTCCTCACCTAGTGATG+GGG | 0.476214 | 1.3:-76758487 | MS.gene056272:CDS |
| AGAAGGCTCAACTAAAGAAT+AGG | 0.479515 | 1.3:-76758302 | MS.gene056272:CDS |
| TCCTCCTCACCTAGTGATGG+GGG | 0.484199 | 1.3:-76758486 | MS.gene056272:CDS |
| GCTGCGGGTAATGCATCTAT+TGG | 0.495551 | 1.3:-76757684 | MS.gene056272:CDS |
| GATGAGGCAGTGGCTGTAGA+AGG | 0.502147 | 1.3:-76757909 | MS.gene056272:CDS |
| AGCCTTCTCATACTTCAGTC+CGG | 0.504703 | 1.3:+76758317 | None:intergenic |
| CGTACCAACACGTTCTCCCT+TGG | 0.505137 | 1.3:+76758392 | None:intergenic |
| TGCTGATGTTTAAGCCTGCA+AGG | 0.517021 | 1.3:-76757587 | MS.gene056272:CDS |
| TGGCTAATGGAGAGTACACT+TGG | 0.522261 | 1.3:-76757989 | MS.gene056272:CDS |
| GCAGTGGCTGTAGAAGGATC+TGG | 0.527670 | 1.3:-76757903 | MS.gene056272:CDS |
| ATGACAGTCTGAGAAAGGAT+TGG | 0.531322 | 1.3:-76758278 | MS.gene056272:CDS |
| CTTCTCCTCTGAACCTCGTA+GGG | 0.535159 | 1.3:+76757551 | None:intergenic |
| GTGGTGGGAGACCAAACAAC+TGG | 0.536532 | 1.3:-76758175 | MS.gene056272:intron |
| TAGGTATGACAGTCTGAGAA+AGG | 0.543958 | 1.3:-76758283 | MS.gene056272:CDS |
| AGGTTAGTCATGAATGGCAG+TGG | 0.548613 | 1.3:+76757495 | None:intergenic |
| TCACACAGGTTAGTCATGAA+TGG | 0.548759 | 1.3:+76757489 | None:intergenic |
| TATTTCCCTACGAGGTTCAG+AGG | 0.555424 | 1.3:-76757556 | MS.gene056272:CDS |
| GGAGAGAAACTGGATTAGGG+TGG | 0.557144 | 1.3:-76758233 | MS.gene056272:CDS |
| ATCATTTGAGACTTCATCCA+TGG | 0.558263 | 1.3:+76757638 | None:intergenic |
| GTCAAAAGAGTGGTGAGAAG+AGG | 0.562252 | 1.3:-76757803 | MS.gene056272:CDS |
| CATGACTAACCTGTGTGACT+AGG | 0.563491 | 1.3:-76757484 | None:intergenic |
| TACGAGGTTCAGAGGAGAAG+AGG | 0.567800 | 1.3:-76757548 | MS.gene056272:CDS |
| CGTTCTCGCAATGATGCTGC+GGG | 0.569360 | 1.3:-76757699 | MS.gene056272:CDS |
| ATGTTTGGAGCAAGTCTCCA+AGG | 0.570714 | 1.3:-76758409 | MS.gene056272:CDS |
| TACACTTGGGCACCATCATG+TGG | 0.573130 | 1.3:-76757975 | MS.gene056272:CDS |
| TCGTTCTCGCAATGATGCTG+CGG | 0.583184 | 1.3:-76757700 | MS.gene056272:CDS |
| TGCATCTATTGGTGAAGTGA+TGG | 0.591393 | 1.3:-76757673 | MS.gene056272:CDS |
| GCTGATGTTTAAGCCTGCAA+GGG | 0.594722 | 1.3:-76757586 | MS.gene056272:CDS |
| TCTTCTCCTCTGAACCTCGT+AGG | 0.595412 | 1.3:+76757550 | None:intergenic |
| GATAGCGAGGATGCAAGTGT+TGG | 0.599986 | 1.3:-76757879 | MS.gene056272:CDS |
| GATGGCAATACCCCACATGA+TGG | 0.601622 | 1.3:+76757963 | None:intergenic |
| CCTCCTCACCTAGTGATGGG+GGG | 0.608278 | 1.3:-76758485 | MS.gene056272:CDS |
| TGAGAAAGGATTGGAGAGCA+TGG | 0.612846 | 1.3:-76758269 | MS.gene056272:CDS |
| GCTACAACAGTGTTGTTCAC+AGG | 0.614063 | 1.3:+76758207 | None:intergenic |
| GTGGTTAACTCATTGGCGAA+TGG | 0.617203 | 1.3:+76758029 | None:intergenic |
| AGAAGGATCTGGCGATAGCG+AGG | 0.624952 | 1.3:-76757892 | MS.gene056272:CDS |
| AACCGGACTGAAGTATGAGA+AGG | 0.626830 | 1.3:-76758319 | MS.gene056272:CDS |
| ACACTTGGGCACCATCATGT+GGG | 0.626839 | 1.3:-76757974 | MS.gene056272:CDS |
| CACTACATCCTTGAAAAGTG+TGG | 0.627204 | 1.3:+76758010 | None:intergenic |
| AAAACTGATGGTCAAAAGAG+TGG | 0.632803 | 1.3:-76757813 | MS.gene056272:CDS |
| TTGTAGCACCTGATGAGTGG+TGG | 0.632872 | 1.3:-76758191 | MS.gene056272:CDS |
| GGTTAGTCATGAATGGCAGT+GGG | 0.638001 | 1.3:+76757496 | None:intergenic |
| CCCATACATCCTAGTCACAC+AGG | 0.638813 | 1.3:+76757475 | None:intergenic |
| GAGAGAAACTGGATTAGGGT+GGG | 0.643865 | 1.3:-76758232 | MS.gene056272:CDS |
| GTCTCCAAGGGAGAACGTGT+TGG | 0.644338 | 1.3:-76758396 | MS.gene056272:CDS |
| CACTTGGGCACCATCATGTG+GGG | 0.646121 | 1.3:-76757973 | MS.gene056272:CDS |
| TGTTTGGAGCAAGTCTCCAA+GGG | 0.647436 | 1.3:-76758408 | MS.gene056272:CDS |
| TGTAGCACCTGATGAGTGGT+GGG | 0.651018 | 1.3:-76758190 | MS.gene056272:CDS |
| GATGGCTGAGCTTCACACCA+TGG | 0.663371 | 1.3:-76757655 | MS.gene056272:CDS |
| GGCTAATGGAGAGTACACTT+GGG | 0.684848 | 1.3:-76757988 | MS.gene056272:CDS |
| CTGTTGTAGCACCTGATGAG+TGG | 0.705267 | 1.3:-76758194 | MS.gene056272:CDS |
| GAGATGTTTATTTCCCTACG+AGG | 0.736446 | 1.3:-76757564 | MS.gene056272:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACCAAGAAAAATATTGT+GGG | - | chr1.3:76757491-76757510 | MS.gene056272:CDS | 20.0% |
| !! | TATGAAAAATTTAGGAACAA+GGG | - | chr1.3:76757945-76757964 | MS.gene056272:CDS | 20.0% |
| !! | TTATGAAAAATTTAGGAACA+AGG | - | chr1.3:76757944-76757963 | MS.gene056272:CDS | 20.0% |
| !!! | TCCTAAATTTTTCATAAAGA+GGG | + | chr1.3:76757941-76757960 | None:intergenic | 20.0% |
| !!! | TTCCTAAATTTTTCATAAAG+AGG | + | chr1.3:76757942-76757961 | None:intergenic | 20.0% |
| ! | AATTCTTCACAAAAAACTGA+TGG | - | chr1.3:76758176-76758195 | MS.gene056272:CDS | 25.0% |
| ! | ACAACTGAATTTGGAAATAT+TGG | - | chr1.3:76758149-76758168 | MS.gene056272:intron | 25.0% |
| ! | ACCCTCTTTATGAAAAATTT+AGG | - | chr1.3:76757937-76757956 | MS.gene056272:CDS | 25.0% |
| ! | ATGAAAAATTTAGGAACAAG+GGG | - | chr1.3:76757946-76757965 | MS.gene056272:CDS | 25.0% |
| ! | CAACTGAATTTGGAAATATT+GGG | - | chr1.3:76758150-76758169 | MS.gene056272:intron | 25.0% |
| ! | GAATACCAAGAAAAATATTG+TGG | - | chr1.3:76757490-76757509 | MS.gene056272:CDS | 25.0% |
| AAAAAGGGTGGACAAATATT+AGG | - | chr1.3:76757642-76757661 | MS.gene056272:CDS | 30.0% | |
| AAAAGGGTGGACAAATATTA+GGG | - | chr1.3:76757643-76757662 | MS.gene056272:CDS | 30.0% | |
| AACACGAGTATACATATCTA+AGG | + | chr1.3:76757883-76757902 | None:intergenic | 30.0% | |
| AGAGCATGGTATAACTTATT+TGG | - | chr1.3:76757746-76757765 | MS.gene056272:CDS | 30.0% | |
| GAGCATGGTATAACTTATTT+GGG | - | chr1.3:76757747-76757766 | MS.gene056272:CDS | 30.0% | |
| GCAGAAAACAAAAGCTAATT+GGG | - | chr1.3:76757538-76757557 | MS.gene056272:CDS | 30.0% | |
| GTCCGATTTCATAATTTAAC+CGG | - | chr1.3:76757665-76757684 | MS.gene056272:CDS | 30.0% | |
| GTCCGGTTAAATTATGAAAT+CGG | + | chr1.3:76757670-76757689 | None:intergenic | 30.0% | |
| TGTATTACATACCAGTTGTT+TGG | + | chr1.3:76757840-76757859 | None:intergenic | 30.0% | |
| ! | AAACTTTGTGAAAGCATGTT+TGG | - | chr1.3:76757577-76757596 | MS.gene056272:CDS | 30.0% |
| ! | ATGATCTTTATTTGCATGCT+CGG | - | chr1.3:76758381-76758400 | MS.gene056272:CDS | 30.0% |
| ! | GTACGAGCTTTTCAAAAAAA+GGG | - | chr1.3:76757627-76757646 | MS.gene056272:CDS | 30.0% |
| ! | TCATCATTTTCAAACACAGA+TGG | + | chr1.3:76758059-76758078 | None:intergenic | 30.0% |
| ! | TGATAATGATGATGATGATG+AGG | - | chr1.3:76758076-76758095 | MS.gene056272:intron | 30.0% |
| AAAACTGATGGTCAAAAGAG+TGG | - | chr1.3:76758188-76758207 | MS.gene056272:CDS | 35.0% | |
| AACTTATTTGGGAGAGAAAC+TGG | - | chr1.3:76757758-76757777 | MS.gene056272:CDS | 35.0% | |
| AGAAGGCTCAACTAAAGAAT+AGG | - | chr1.3:76757699-76757718 | MS.gene056272:CDS | 35.0% | |
| GATGTGAGTTATGAAAATGC+AGG | - | chr1.3:76757911-76757930 | MS.gene056272:CDS | 35.0% | |
| GGCAGAAAACAAAAGCTAAT+TGG | - | chr1.3:76757537-76757556 | MS.gene056272:CDS | 35.0% | |
| ! | ATCATTTGAGACTTCATCCA+TGG | + | chr1.3:76758366-76758385 | None:intergenic | 35.0% |
| ! | GAAAAGTGTGGTTAACTCAT+TGG | + | chr1.3:76757982-76758001 | None:intergenic | 35.0% |
| ! | GGAACCCACAATATTTTTCT+TGG | + | chr1.3:76757498-76757517 | None:intergenic | 35.0% |
| ! | GGTACGAGCTTTTCAAAAAA+AGG | - | chr1.3:76757626-76757645 | MS.gene056272:CDS | 35.0% |
| ! | TGAGTTAACCACACTTTTCA+AGG | - | chr1.3:76757983-76758002 | MS.gene056272:CDS | 35.0% |
| !!! | GCACTTGCTTTTTTCTTACT+TGG | + | chr1.3:76758236-76758255 | None:intergenic | 35.0% |
| ATGACAGTCTGAGAAAGGAT+TGG | - | chr1.3:76757723-76757742 | MS.gene056272:CDS | 40.0% | |
| CACTACATCCTTGAAAAGTG+TGG | + | chr1.3:76757994-76758013 | None:intergenic | 40.0% | |
| GAAATAAACATCTCCCTTGC+AGG | + | chr1.3:76758431-76758450 | None:intergenic | 40.0% | |
| GAGATGTTTATTTCCCTACG+AGG | - | chr1.3:76758437-76758456 | MS.gene056272:CDS | 40.0% | |
| GTTGGAGCAACAACTGAATT+TGG | - | chr1.3:76758140-76758159 | MS.gene056272:intron | 40.0% | |
| TAGGTATGACAGTCTGAGAA+AGG | - | chr1.3:76757718-76757737 | MS.gene056272:CDS | 40.0% | |
| TGCATCTATTGGTGAAGTGA+TGG | - | chr1.3:76758328-76758347 | MS.gene056272:CDS | 40.0% | |
| TTCAAGGATGTAGTGGCTAA+TGG | - | chr1.3:76757999-76758018 | MS.gene056272:CDS | 40.0% | |
| TTGGGAGAGAAACTGGATTA+GGG | - | chr1.3:76757765-76757784 | MS.gene056272:CDS | 40.0% | |
| TTTGGGAGAGAAACTGGATT+AGG | - | chr1.3:76757764-76757783 | MS.gene056272:CDS | 40.0% | |
| ! | CGAGCTTTTCAAAAAAAGGG+TGG | - | chr1.3:76757630-76757649 | MS.gene056272:CDS | 40.0% |
| ! | TCACACAGGTTAGTCATGAA+TGG | + | chr1.3:76758515-76758534 | None:intergenic | 40.0% |
| !! | CACACTTTTCAAGGATGTAG+TGG | - | chr1.3:76757992-76758011 | MS.gene056272:CDS | 40.0% |
| AACCGGACTGAAGTATGAGA+AGG | - | chr1.3:76757682-76757701 | MS.gene056272:CDS | 45.0% | |
| AGCCTTCTCATACTTCAGTC+CGG | + | chr1.3:76757687-76757706 | None:intergenic | 45.0% | |
| CAGAGGAGAAGAGGTTGAAT+TGG | - | chr1.3:76758462-76758481 | MS.gene056272:CDS | 45.0% | |
| GCTGATGTTTAAGCCTGCAA+GGG | - | chr1.3:76758415-76758434 | MS.gene056272:CDS | 45.0% | |
| GTCAAAAGAGTGGTGAGAAG+AGG | - | chr1.3:76758198-76758217 | MS.gene056272:CDS | 45.0% | |
| GTGGTTAACTCATTGGCGAA+TGG | + | chr1.3:76757975-76757994 | None:intergenic | 45.0% | |
| TATTTCCCTACGAGGTTCAG+AGG | - | chr1.3:76758445-76758464 | MS.gene056272:CDS | 45.0% | |
| TGAGAAAGGATTGGAGAGCA+TGG | - | chr1.3:76757732-76757751 | MS.gene056272:CDS | 45.0% | |
| TGCTGATGTTTAAGCCTGCA+AGG | - | chr1.3:76758414-76758433 | MS.gene056272:CDS | 45.0% | |
| ! | AGGTTAGTCATGAATGGCAG+TGG | + | chr1.3:76758509-76758528 | None:intergenic | 45.0% |
| ! | ATGTTTGGAGCAAGTCTCCA+AGG | - | chr1.3:76757592-76757611 | MS.gene056272:CDS | 45.0% |
| ! | GAGAGAAACTGGATTAGGGT+GGG | - | chr1.3:76757769-76757788 | MS.gene056272:CDS | 45.0% |
| ! | GCTACAACAGTGTTGTTCAC+AGG | + | chr1.3:76757797-76757816 | None:intergenic | 45.0% |
| ! | GGCTAATGGAGAGTACACTT+GGG | - | chr1.3:76758013-76758032 | MS.gene056272:CDS | 45.0% |
| ! | GGTTAGTCATGAATGGCAGT+GGG | + | chr1.3:76758508-76758527 | None:intergenic | 45.0% |
| ! | TGATGATGATGATGAGGCAG+TGG | - | chr1.3:76758082-76758101 | MS.gene056272:intron | 45.0% |
| ! | TGGCTAATGGAGAGTACACT+TGG | - | chr1.3:76758012-76758031 | MS.gene056272:CDS | 45.0% |
| ! | TGTTTGGAGCAAGTCTCCAA+GGG | - | chr1.3:76757593-76757612 | MS.gene056272:CDS | 45.0% |
| ACACTTGGGCACCATCATGT+GGG | - | chr1.3:76758027-76758046 | MS.gene056272:CDS | 50.0% | |
| CTGTTGTAGCACCTGATGAG+TGG | - | chr1.3:76757807-76757826 | MS.gene056272:CDS | 50.0% | |
| CTTCTCCTCTGAACCTCGTA+GGG | + | chr1.3:76758453-76758472 | None:intergenic | 50.0% | |
| GATAGCGAGGATGCAAGTGT+TGG | - | chr1.3:76758122-76758141 | MS.gene056272:intron | 50.0% | |
| GATGGCAATACCCCACATGA+TGG | + | chr1.3:76758041-76758060 | None:intergenic | 50.0% | |
| GCTGCGGGTAATGCATCTAT+TGG | - | chr1.3:76758317-76758336 | MS.gene056272:CDS | 50.0% | |
| GTTCCTCCTCACCTAGTGAT+GGG | - | chr1.3:76757513-76757532 | MS.gene056272:CDS | 50.0% | |
| TACACTTGGGCACCATCATG+TGG | - | chr1.3:76758026-76758045 | MS.gene056272:CDS | 50.0% | |
| TACGAGGTTCAGAGGAGAAG+AGG | - | chr1.3:76758453-76758472 | MS.gene056272:CDS | 50.0% | |
| TCGTTCTCGCAATGATGCTG+CGG | - | chr1.3:76758301-76758320 | MS.gene056272:CDS | 50.0% | |
| TCTTCTCCTCTGAACCTCGT+AGG | + | chr1.3:76758454-76758473 | None:intergenic | 50.0% | |
| TGTAGCACCTGATGAGTGGT+GGG | - | chr1.3:76757811-76757830 | MS.gene056272:CDS | 50.0% | |
| TTCCTCCTCACCTAGTGATG+GGG | - | chr1.3:76757514-76757533 | MS.gene056272:CDS | 50.0% | |
| TTGTAGCACCTGATGAGTGG+TGG | - | chr1.3:76757810-76757829 | MS.gene056272:CDS | 50.0% | |
| ! | GGAGAGAAACTGGATTAGGG+TGG | - | chr1.3:76757768-76757787 | MS.gene056272:CDS | 50.0% |
| AGAAGGATCTGGCGATAGCG+AGG | - | chr1.3:76758109-76758128 | MS.gene056272:intron | 55.0% | |
| CACTTGGGCACCATCATGTG+GGG | - | chr1.3:76758028-76758047 | MS.gene056272:CDS | 55.0% | |
| CGTACCAACACGTTCTCCCT+TGG | + | chr1.3:76757612-76757631 | None:intergenic | 55.0% | |
| CGTTCTCGCAATGATGCTGC+GGG | - | chr1.3:76758302-76758321 | MS.gene056272:CDS | 55.0% | |
| GATGAGGCAGTGGCTGTAGA+AGG | - | chr1.3:76758092-76758111 | MS.gene056272:intron | 55.0% | |
| GATGGCTGAGCTTCACACCA+TGG | - | chr1.3:76758346-76758365 | MS.gene056272:CDS | 55.0% | |
| GCAGTGGCTGTAGAAGGATC+TGG | - | chr1.3:76758098-76758117 | MS.gene056272:intron | 55.0% | |
| GGTTCCTCCTCACCTAGTGA+TGG | - | chr1.3:76757512-76757531 | MS.gene056272:CDS | 55.0% | |
| GTCTCCAAGGGAGAACGTGT+TGG | - | chr1.3:76757605-76757624 | MS.gene056272:CDS | 55.0% | |
| TCCTCCTCACCTAGTGATGG+GGG | - | chr1.3:76757515-76757534 | MS.gene056272:CDS | 55.0% | |
| TTGGTCTCCCACCACTCATC+AGG | + | chr1.3:76757821-76757840 | None:intergenic | 55.0% | |
| ! | GTGGTGGGAGACCAAACAAC+TGG | - | chr1.3:76757826-76757845 | MS.gene056272:CDS | 55.0% |
| ! | GTTTTCTGCCCCCCATCACT+AGG | + | chr1.3:76757527-76757546 | None:intergenic | 55.0% |
| ! | CCTCCTCACCTAGTGATGGG+GGG | - | chr1.3:76757516-76757535 | MS.gene056272:CDS | 60.0% |
| CCCCCCATCACTAGGTGAGG+AGG | + | chr1.3:76757519-76757538 | None:intergenic | 65.0% | |
| CTGCCCCCCATCACTAGGTG+AGG | + | chr1.3:76757522-76757541 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 76757485 | 76758538 | 76757485 | ID=MS.gene056272 |
| chr1.3 | mRNA | 76757485 | 76758538 | 76757485 | ID=MS.gene056272.t1;Parent=MS.gene056272 |
| chr1.3 | exon | 76758176 | 76758538 | 76758176 | ID=MS.gene056272.t1.exon1;Parent=MS.gene056272.t1 |
| chr1.3 | CDS | 76758176 | 76758538 | 76758176 | ID=cds.MS.gene056272.t1;Parent=MS.gene056272.t1 |
| chr1.3 | exon | 76757485 | 76758090 | 76757485 | ID=MS.gene056272.t1.exon2;Parent=MS.gene056272.t1 |
| chr1.3 | CDS | 76757485 | 76758090 | 76757485 | ID=cds.MS.gene056272.t1;Parent=MS.gene056272.t1 |
| Gene Sequence |
| Protein sequence |
