Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41418.t1 | RHN81841.1 | 99.3 | 305 | 2 | 0 | 1 | 305 | 58 | 362 | 1.50E-173 | 618.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41418.t1 | Q9M2Z5 | 68.6 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 5.4e-119 | 428.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41418.t1 | I3SW40 | 99.3 | 305 | 2 | 0 | 1 | 305 | 1 | 305 | 1.1e-173 | 618.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene41418 | -0.812259 | 4.64E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene41418 | -0.831695 | 1.44E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene41418 | -0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene41418 | -0.806021 | 1.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41418.t1 | MTR_1g100697 | 99.344 | 305 | 2 | 0 | 1 | 305 | 1 | 305 | 0.0 | 619 |
| MS.gene41418.t1 | MTR_1g100707 | 91.475 | 305 | 26 | 0 | 1 | 305 | 1 | 305 | 0.0 | 572 |
| MS.gene41418.t1 | MTR_1g100713 | 55.705 | 298 | 128 | 1 | 12 | 305 | 21 | 318 | 2.12e-112 | 328 |
| MS.gene41418.t1 | MTR_0013s0100 | 53.265 | 291 | 134 | 2 | 17 | 305 | 25 | 315 | 1.03e-105 | 311 |
| MS.gene41418.t1 | MTR_4g099030 | 48.136 | 295 | 140 | 2 | 12 | 305 | 21 | 303 | 2.18e-97 | 289 |
| MS.gene41418.t1 | MTR_7g074410 | 34.812 | 293 | 186 | 2 | 12 | 304 | 13 | 300 | 2.06e-53 | 177 |
| MS.gene41418.t1 | MTR_7g074430 | 32.441 | 299 | 197 | 2 | 6 | 304 | 7 | 300 | 9.37e-51 | 170 |
| MS.gene41418.t1 | MTR_7g075970 | 34.122 | 296 | 174 | 5 | 17 | 304 | 13 | 295 | 6.02e-44 | 152 |
| MS.gene41418.t1 | MTR_1g029330 | 32.313 | 294 | 193 | 4 | 12 | 304 | 13 | 301 | 1.09e-40 | 144 |
| MS.gene41418.t1 | MTR_2g018940 | 29.289 | 239 | 143 | 7 | 4 | 233 | 18 | 239 | 8.68e-17 | 79.7 |
| MS.gene41418.t1 | MTR_2g018910 | 28.151 | 238 | 143 | 7 | 6 | 233 | 23 | 242 | 1.98e-16 | 79.0 |
| MS.gene41418.t1 | MTR_8g091730 | 26.050 | 238 | 157 | 5 | 3 | 232 | 15 | 241 | 4.06e-16 | 77.8 |
| MS.gene41418.t1 | MTR_2g018950 | 27.530 | 247 | 145 | 6 | 4 | 233 | 17 | 246 | 1.17e-13 | 70.9 |
| MS.gene41418.t1 | MTR_3g080330 | 27.193 | 228 | 144 | 5 | 11 | 232 | 13 | 224 | 5.30e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41418.t1 | AT3G48880 | 68.562 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 1.34e-152 | 429 |
| MS.gene41418.t1 | AT3G48880 | 68.562 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 1.34e-152 | 429 |
| MS.gene41418.t1 | AT3G48880 | 68.562 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 1.34e-152 | 429 |
| MS.gene41418.t1 | AT4G11580 | 29.532 | 342 | 188 | 11 | 1 | 303 | 4 | 331 | 8.73e-33 | 124 |
Find 56 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCTCAAGACTCTCAATTT+TGG | 0.223803 | 1.4:-78489946 | None:intergenic |
| ACAAGTATGAGGAAGGATTT+TGG | 0.237709 | 1.4:+78490220 | MS.gene41418:CDS |
| GCAATTTCCTCTAGAAAATA+TGG | 0.237803 | 1.4:-78489841 | None:intergenic |
| CTTGCTGTGATCCACTTCTT+TGG | 0.265127 | 1.4:+78489095 | MS.gene41418:CDS |
| CTTCAGTGAACTCAAGATTA+TGG | 0.275898 | 1.4:+78489879 | MS.gene41418:CDS |
| TCAAGGAAATCTTCAATAAT+CGG | 0.286560 | 1.4:-78489213 | None:intergenic |
| CGCGCAATCGAGAAGCCTTC+TGG | 0.341689 | 1.4:-78490122 | None:intergenic |
| ACGTAAACAAAAGGCTCTAA+TGG | 0.360702 | 1.4:-78489163 | None:intergenic |
| GACATATTCGAGTTAACTTC+TGG | 0.361591 | 1.4:+78489040 | MS.gene41418:CDS |
| TATATCACATTGCATTCTAA+TGG | 0.362218 | 1.4:+78490041 | MS.gene41418:CDS |
| CACTCACGTACAAGTTGAAA+TGG | 0.379756 | 1.4:-78489270 | None:intergenic |
| TTCGGTGTTCAACGCTATAT+AGG | 0.386217 | 1.4:+78489968 | MS.gene41418:CDS |
| CACGAGGAGATGGGAGGATC+TGG | 0.389695 | 1.4:+78488982 | MS.gene41418:CDS |
| GGATCTGGACACAGATATAT+TGG | 0.398991 | 1.4:+78488997 | MS.gene41418:CDS |
| TTCAGTGAACTCAAGATTAT+GGG | 0.400982 | 1.4:+78489880 | MS.gene41418:CDS |
| TGTGCAAGGCAATCCGTTGC+TGG | 0.424432 | 1.4:+78489776 | MS.gene41418:CDS |
| ACTCATTCTGCTCAGATTCA+AGG | 0.426417 | 1.4:-78489230 | None:intergenic |
| AATTGAGAGTCTTGAGCCTT+CGG | 0.435748 | 1.4:+78489950 | MS.gene41418:CDS |
| CAAGGAAATCTTCAATAATC+GGG | 0.435917 | 1.4:-78489212 | None:intergenic |
| GAACTGATGAAGGGATAGTT+AGG | 0.442152 | 1.4:+78490193 | MS.gene41418:CDS |
| AACGACTGGTTCTTCCGGCT+TGG | 0.442940 | 1.4:+78489731 | MS.gene41418:CDS |
| TTGTTTCGAACACGAGGAGA+TGG | 0.448455 | 1.4:+78488972 | MS.gene41418:CDS |
| GCTCAAACGACTGGTTCTTC+CGG | 0.448751 | 1.4:+78489726 | MS.gene41418:CDS |
| AGTTAGGTGGTACAAGTATG+AGG | 0.451024 | 1.4:+78490209 | MS.gene41418:CDS |
| TGGAACAGAATTAAAAGAAC+AGG | 0.456792 | 1.4:+78489751 | MS.gene41418:CDS |
| TTGCTCATGTTTGTAGCGCA+TGG | 0.458078 | 1.4:+78489065 | MS.gene41418:CDS |
| TCGGTGTTCAACGCTATATA+GGG | 0.478065 | 1.4:+78489969 | MS.gene41418:CDS |
| CTTCATCAGTTCTTGTACGT+TGG | 0.501934 | 1.4:-78490182 | None:intergenic |
| CTAAATGTTCTAAGCTGTCT+AGG | 0.503752 | 1.4:-78490008 | None:intergenic |
| CGTTCATCAACGTAAACAAA+AGG | 0.517545 | 1.4:-78489172 | None:intergenic |
| GAACCAGTCGTTTGAGCTGT+GGG | 0.524995 | 1.4:-78489720 | None:intergenic |
| TGTTTCGAACACGAGGAGAT+GGG | 0.527745 | 1.4:+78488973 | MS.gene41418:CDS |
| TGTTTGTAGCGCATGGCGCA+TGG | 0.531694 | 1.4:+78489072 | MS.gene41418:CDS |
| TGATTCTACTATTCGCCAGA+AGG | 0.543301 | 1.4:+78490107 | MS.gene41418:CDS |
| AGGTGGTACAAGTATGAGGA+AGG | 0.544931 | 1.4:+78490213 | MS.gene41418:CDS |
| TATTGTCTGCTTAAAGTGCA+AGG | 0.545483 | 1.4:-78490263 | None:intergenic |
| AATCCGTTGCTGGAAAGAGC+TGG | 0.549877 | 1.4:+78489786 | MS.gene41418:CDS |
| ATTGTCTGCTTAAAGTGCAA+GGG | 0.551474 | 1.4:-78490262 | None:intergenic |
| CAACGTACAAGAACTGATGA+AGG | 0.552652 | 1.4:+78490183 | MS.gene41418:CDS |
| AGAACCAGTCGTTTGAGCTG+TGG | 0.570755 | 1.4:-78489721 | None:intergenic |
| GCGCGAATTTATCACATGCA+TGG | 0.572175 | 1.4:+78490140 | MS.gene41418:CDS |
| ACTCCAGCTCTTTCCAGCAA+CGG | 0.573617 | 1.4:-78489789 | None:intergenic |
| TCAAGCGTCTTCCAAAGAAG+TGG | 0.580522 | 1.4:-78489106 | None:intergenic |
| TTTCCTCTAGAAAATATGGC+GGG | 0.587537 | 1.4:-78489837 | None:intergenic |
| TATGGCGGGTTTGCTATACT+AGG | 0.604329 | 1.4:-78489823 | None:intergenic |
| GTGCCCACAGCTCAAACGAC+TGG | 0.606234 | 1.4:+78489717 | MS.gene41418:CDS |
| TATATAGCGTTGAACACCGA+AGG | 0.621770 | 1.4:-78489966 | None:intergenic |
| TAAAAGAACAGGAATGTGCA+AGG | 0.624054 | 1.4:+78489762 | MS.gene41418:CDS |
| AGTTGACATACACTGCTGAA+AGG | 0.630322 | 1.4:+78489299 | MS.gene41418:CDS |
| AAGACGTTGTTTCGAACACG+AGG | 0.632817 | 1.4:+78488966 | MS.gene41418:CDS |
| TCAGTGAACTCAAGATTATG+GGG | 0.652634 | 1.4:+78489881 | MS.gene41418:CDS |
| TTCGAACACGAGGAGATGGG+AGG | 0.657865 | 1.4:+78488976 | MS.gene41418:CDS |
| AACGTACAAGAACTGATGAA+GGG | 0.659917 | 1.4:+78490184 | MS.gene41418:CDS |
| CTGATGAAGGGATAGTTAGG+TGG | 0.665188 | 1.4:+78490196 | MS.gene41418:CDS |
| ATTTCCTCTAGAAAATATGG+CGG | 0.666839 | 1.4:-78489838 | None:intergenic |
| GAAGCAAAGAAGATGTCACA+TGG | 0.687775 | 1.4:-78489904 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTTAGAGAGATTAA+TGG | + | chr1.4:78489337-78489356 | MS.gene41418:intron | 15.0% |
| !!! | CTCTAAATATATTTTAAAGT+TGG | - | chr1.4:78489330-78489349 | None:intergenic | 15.0% |
| !!! | TTATTTTTGAAAAGATAATG+CGG | + | chr1.4:78489609-78489628 | MS.gene41418:intron | 15.0% |
| !!! | TTGATAATTTTTTTATGTTG+AGG | - | chr1.4:78490081-78490100 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTTATGTTGAGG+AGG | - | chr1.4:78490078-78490097 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTATGTTGAGGA+GGG | - | chr1.4:78490077-78490096 | None:intergenic | 20.0% |
| !!! | TTTGACGGTTTTTAAATAAA+AGG | - | chr1.4:78489440-78489459 | None:intergenic | 20.0% |
| ! | TATATCACATTGCATTCTAA+TGG | + | chr1.4:78490041-78490060 | MS.gene41418:CDS | 25.0% |
| ! | TCAAGGAAATCTTCAATAAT+CGG | - | chr1.4:78489216-78489235 | None:intergenic | 25.0% |
| !!! | AATTTTTTTATGTTGAGGAG+GGG | - | chr1.4:78490076-78490095 | None:intergenic | 25.0% |
| !!! | TATGCAGTTATTTGTTATGT+TGG | - | chr1.4:78489413-78489432 | None:intergenic | 25.0% |
| CAAGGAAATCTTCAATAATC+GGG | - | chr1.4:78489215-78489234 | None:intergenic | 30.0% | |
| CTAGATTGAAGAATTGTGAT+CGG | + | chr1.4:78489469-78489488 | MS.gene41418:intron | 30.0% | |
| TGGAACAGAATTAAAAGAAC+AGG | + | chr1.4:78489751-78489770 | MS.gene41418:CDS | 30.0% | |
| TTATTAGCACTCCTTCAAAA+TGG | + | chr1.4:78489645-78489664 | MS.gene41418:intron | 30.0% | |
| TTCAGTGAACTCAAGATTAT+GGG | + | chr1.4:78489880-78489899 | MS.gene41418:CDS | 30.0% | |
| ! | ATTTCCTCTAGAAAATATGG+CGG | - | chr1.4:78489841-78489860 | None:intergenic | 30.0% |
| ! | CATTGTACTATCCATTTTGA+AGG | - | chr1.4:78489659-78489678 | None:intergenic | 30.0% |
| ! | GACGGTTTTTAAATAAAAGG+CGG | - | chr1.4:78489437-78489456 | None:intergenic | 30.0% |
| ! | GATTCAAGTTATGAGATTGA+TGG | - | chr1.4:78489542-78489561 | None:intergenic | 30.0% |
| ! | GCAATTTCCTCTAGAAAATA+TGG | - | chr1.4:78489844-78489863 | None:intergenic | 30.0% |
| ! | TTATGTTGGTGAGTTCTAAT+TGG | - | chr1.4:78489399-78489418 | None:intergenic | 30.0% |
| !!! | ATTTTTTTATGTTGAGGAGG+GGG | - | chr1.4:78490075-78490094 | None:intergenic | 30.0% |
| AACGTACAAGAACTGATGAA+GGG | + | chr1.4:78490184-78490203 | MS.gene41418:CDS | 35.0% | |
| AGTGTAAAACAACTTTCCAC+TGG | - | chr1.4:78489371-78489390 | None:intergenic | 35.0% | |
| ATCTAGCGAATCATGTTTGA+CGG | - | chr1.4:78489455-78489474 | None:intergenic | 35.0% | |
| CGTTCATCAACGTAAACAAA+AGG | - | chr1.4:78489175-78489194 | None:intergenic | 35.0% | |
| CTTCAGTGAACTCAAGATTA+TGG | + | chr1.4:78489879-78489898 | MS.gene41418:CDS | 35.0% | |
| TAAAAGAACAGGAATGTGCA+AGG | + | chr1.4:78489762-78489781 | MS.gene41418:CDS | 35.0% | |
| TCAGTGAACTCAAGATTATG+GGG | + | chr1.4:78489881-78489900 | MS.gene41418:CDS | 35.0% | |
| ! | AAGAATTGTGATCGGTTCAT+CGG | + | chr1.4:78489477-78489496 | MS.gene41418:intron | 35.0% |
| ! | ACAAGTATGAGGAAGGATTT+TGG | + | chr1.4:78490220-78490239 | MS.gene41418:CDS | 35.0% |
| ! | ACGTAAACAAAAGGCTCTAA+TGG | - | chr1.4:78489166-78489185 | None:intergenic | 35.0% |
| ! | AGGGGTGAGATTAGTTATTT+AGG | - | chr1.4:78489689-78489708 | None:intergenic | 35.0% |
| ! | CTAAATGTTCTAAGCTGTCT+AGG | - | chr1.4:78490011-78490030 | None:intergenic | 35.0% |
| ! | GACATATTCGAGTTAACTTC+TGG | + | chr1.4:78489040-78489059 | MS.gene41418:CDS | 35.0% |
| ! | TTTCCTCTAGAAAATATGGC+GGG | - | chr1.4:78489840-78489859 | None:intergenic | 35.0% |
| !! | AGGATTTTGGAAAGAAGATG+AGG | + | chr1.4:78490233-78490252 | MS.gene41418:CDS | 35.0% |
| !! | CTTTTAATTCTGTTCCAAGC+CGG | - | chr1.4:78489748-78489767 | None:intergenic | 35.0% |
| !!! | TTTTTTTATGTTGAGGAGGG+GGG | - | chr1.4:78490074-78490093 | None:intergenic | 35.0% |
| AATTGAGAGTCTTGAGCCTT+CGG | + | chr1.4:78489950-78489969 | MS.gene41418:CDS | 40.0% | |
| ACTCATTCTGCTCAGATTCA+AGG | - | chr1.4:78489233-78489252 | None:intergenic | 40.0% | |
| AGTTAGGTGGTACAAGTATG+AGG | + | chr1.4:78490209-78490228 | MS.gene41418:CDS | 40.0% | |
| AGTTGACATACACTGCTGAA+AGG | + | chr1.4:78489299-78489318 | MS.gene41418:CDS | 40.0% | |
| CAACGTACAAGAACTGATGA+AGG | + | chr1.4:78490183-78490202 | MS.gene41418:CDS | 40.0% | |
| CTACGAAACATCGTACGAAA+AGG | - | chr1.4:78489571-78489590 | None:intergenic | 40.0% | |
| CTTCATCAGTTCTTGTACGT+TGG | - | chr1.4:78490185-78490204 | None:intergenic | 40.0% | |
| GAACTGATGAAGGGATAGTT+AGG | + | chr1.4:78490193-78490212 | MS.gene41418:CDS | 40.0% | |
| GAAGCAAAGAAGATGTCACA+TGG | - | chr1.4:78489907-78489926 | None:intergenic | 40.0% | |
| GGATCTGGACACAGATATAT+TGG | + | chr1.4:78488997-78489016 | MS.gene41418:CDS | 40.0% | |
| TGATTCTACTATTCGCCAGA+AGG | + | chr1.4:78490107-78490126 | MS.gene41418:CDS | 40.0% | |
| ! | AAACCCGCCATATTTTCTAG+AGG | + | chr1.4:78489834-78489853 | MS.gene41418:CDS | 40.0% |
| ! | AGGCTCAAGACTCTCAATTT+TGG | - | chr1.4:78489949-78489968 | None:intergenic | 40.0% |
| ! | CACTCACGTACAAGTTGAAA+TGG | - | chr1.4:78489273-78489292 | None:intergenic | 40.0% |
| ! | CTTTTCGTACGATGTTTCGT+AGG | + | chr1.4:78489569-78489588 | MS.gene41418:intron | 40.0% |
| ! | TATATAGCGTTGAACACCGA+AGG | - | chr1.4:78489969-78489988 | None:intergenic | 40.0% |
| ! | TCGGTGTTCAACGCTATATA+GGG | + | chr1.4:78489969-78489988 | MS.gene41418:CDS | 40.0% |
| !! | AGGAGTGCTAATAACTAGCA+AGG | - | chr1.4:78489639-78489658 | None:intergenic | 40.0% |
| !! | TTCGGTGTTCAACGCTATAT+AGG | + | chr1.4:78489968-78489987 | MS.gene41418:CDS | 40.0% |
| AGGTGGTACAAGTATGAGGA+AGG | + | chr1.4:78490213-78490232 | MS.gene41418:CDS | 45.0% | |
| CGAAACATCGTACGAAAAGG+TGG | - | chr1.4:78489568-78489587 | None:intergenic | 45.0% | |
| CTGATGAAGGGATAGTTAGG+TGG | + | chr1.4:78490196-78490215 | MS.gene41418:CDS | 45.0% | |
| GCGCGAATTTATCACATGCA+TGG | + | chr1.4:78490140-78490159 | MS.gene41418:CDS | 45.0% | |
| TCAAGCGTCTTCCAAAGAAG+TGG | - | chr1.4:78489109-78489128 | None:intergenic | 45.0% | |
| TGTTTCGAACACGAGGAGAT+GGG | + | chr1.4:78488973-78488992 | MS.gene41418:CDS | 45.0% | |
| TTGCTCATGTTTGTAGCGCA+TGG | + | chr1.4:78489065-78489084 | MS.gene41418:CDS | 45.0% | |
| TTGTTTCGAACACGAGGAGA+TGG | + | chr1.4:78488972-78488991 | MS.gene41418:CDS | 45.0% | |
| ! | AAGACGTTGTTTCGAACACG+AGG | + | chr1.4:78488966-78488985 | MS.gene41418:CDS | 45.0% |
| ! | ATTAATGGATGCACTGCCAG+TGG | + | chr1.4:78489352-78489371 | MS.gene41418:intron | 45.0% |
| ! | CTTGCTGTGATCCACTTCTT+TGG | + | chr1.4:78489095-78489114 | MS.gene41418:CDS | 45.0% |
| !! | TATGGCGGGTTTGCTATACT+AGG | - | chr1.4:78489826-78489845 | None:intergenic | 45.0% |
| AATCCGTTGCTGGAAAGAGC+TGG | + | chr1.4:78489786-78489805 | MS.gene41418:CDS | 50.0% | |
| ACTCCAGCTCTTTCCAGCAA+CGG | - | chr1.4:78489792-78489811 | None:intergenic | 50.0% | |
| AGAACCAGTCGTTTGAGCTG+TGG | - | chr1.4:78489724-78489743 | None:intergenic | 50.0% | |
| CTAATCTCACCCCTTGTTGC+AGG | + | chr1.4:78489695-78489714 | MS.gene41418:intron | 50.0% | |
| GAACCAGTCGTTTGAGCTGT+GGG | - | chr1.4:78489723-78489742 | None:intergenic | 50.0% | |
| ! | GCTCAAACGACTGGTTCTTC+CGG | + | chr1.4:78489726-78489745 | MS.gene41418:CDS | 50.0% |
| TGTGCAAGGCAATCCGTTGC+TGG | + | chr1.4:78489776-78489795 | MS.gene41418:CDS | 55.0% | |
| TGTTTGTAGCGCATGGCGCA+TGG | + | chr1.4:78489072-78489091 | MS.gene41418:CDS | 55.0% | |
| TTCGAACACGAGGAGATGGG+AGG | + | chr1.4:78488976-78488995 | MS.gene41418:CDS | 55.0% | |
| ! | AACGACTGGTTCTTCCGGCT+TGG | + | chr1.4:78489731-78489750 | MS.gene41418:CDS | 55.0% |
| AGCTGTGGGCACCTGCAACA+AGG | - | chr1.4:78489709-78489728 | None:intergenic | 60.0% | |
| CACGAGGAGATGGGAGGATC+TGG | + | chr1.4:78488982-78489001 | MS.gene41418:CDS | 60.0% | |
| CGCGCAATCGAGAAGCCTTC+TGG | - | chr1.4:78490125-78490144 | None:intergenic | 60.0% | |
| CTGTGGGCACCTGCAACAAG+GGG | - | chr1.4:78489707-78489726 | None:intergenic | 60.0% | |
| GCTGTGGGCACCTGCAACAA+GGG | - | chr1.4:78489708-78489727 | None:intergenic | 60.0% | |
| GTGCCCACAGCTCAAACGAC+TGG | + | chr1.4:78489717-78489736 | MS.gene41418:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 78488962 | 78490275 | 78488962 | ID=MS.gene41418 |
| chr1.4 | mRNA | 78488962 | 78490275 | 78488962 | ID=MS.gene41418.t1;Parent=MS.gene41418 |
| chr1.4 | exon | 78488962 | 78489320 | 78488962 | ID=MS.gene41418.t1.exon1;Parent=MS.gene41418.t1 |
| chr1.4 | CDS | 78488962 | 78489320 | 78488962 | ID=cds.MS.gene41418.t1;Parent=MS.gene41418.t1 |
| chr1.4 | exon | 78489717 | 78490275 | 78489717 | ID=MS.gene41418.t1.exon2;Parent=MS.gene41418.t1 |
| chr1.4 | CDS | 78489717 | 78490275 | 78489717 | ID=cds.MS.gene41418.t1;Parent=MS.gene41418.t1 |
| Gene Sequence |
| Protein sequence |
