AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059597


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059597.t1 MTR_6g088270 93.891 1064 48 3 1 1057 1 1054 0.0 1944
MS.gene059597.t1 MTR_6g087300 56.658 383 85 5 653 1029 50 357 1.71e-117 366
MS.gene059597.t1 MTR_6g087300 50.549 182 61 1 608 789 206 358 4.38e-47 173
MS.gene059597.t1 MTR_6g087270 67.466 292 35 3 1 292 1 232 1.93e-115 356
MS.gene059597.t1 MTR_2g039780 76.163 172 25 3 887 1057 60 216 2.74e-73 242
MS.gene059597.t1 MTR_2g039780 56.364 165 56 3 649 812 63 212 1.09e-49 175
MS.gene059597.t1 MTR_6g088250 55.036 278 69 8 449 692 1086 1341 9.39e-67 246
MS.gene059597.t1 MTR_6g088250 68.182 110 35 0 825 934 1233 1342 1.06e-37 154
MS.gene059597.t1 MTR_6g084360 51.943 283 67 4 525 806 893 1107 4.42e-66 243
MS.gene059597.t1 MTR_6g084360 75.301 166 12 1 884 1049 973 1109 7.31e-66 242
MS.gene059597.t1 MTR_6g027070 75.000 152 19 1 611 762 12 144 5.67e-64 213
MS.gene059597.t1 MTR_6g027070 57.962 157 47 2 846 1002 6 143 2.50e-47 166
MS.gene059597.t1 MTR_0428s0020 57.732 194 27 3 847 1040 38 176 9.30e-53 184
MS.gene059597.t1 MTR_0428s0020 38.380 284 82 6 600 881 30 222 9.82e-43 155
MS.gene059597.t1 MTR_6g088240 56.383 188 65 3 870 1045 1 183 1.06e-51 180
MS.gene059597.t1 MTR_6g088240 49.189 185 83 4 629 804 1 183 1.99e-44 159
MS.gene059597.t1 MTR_2g039790 79.279 111 10 1 847 957 15 112 1.74e-49 172
MS.gene059597.t1 MTR_2g039790 59.649 114 33 1 608 721 17 117 6.20e-37 136
MS.gene059597.t1 MTR_6g488290 56.354 181 24 3 847 1027 38 163 7.75e-47 166
MS.gene059597.t1 MTR_6g488290 42.328 189 52 4 600 786 30 163 2.22e-31 122
MS.gene059597.t1 MTR_6g488300 43.333 330 104 12 370 674 1063 1334 3.04e-44 175
MS.gene059597.t1 MTR_0428s0030 41.786 280 97 9 406 674 1164 1388 2.70e-39 159
MS.gene059597.t1 MTR_6g066260 75.000 80 20 0 655 734 18 97 2.26e-32 121
MS.gene059597.t1 MTR_6g066260 50.526 95 47 0 881 975 3 97 6.37e-24 97.4
MS.gene059597.t1 MTR_6g087200 76.829 82 9 1 672 753 1033 1104 1.66e-28 124
MS.gene059597.t1 MTR_6g087200 53.659 82 28 1 913 994 1033 1104 1.55e-18 92.0
MS.gene059597.t1 MTR_6g088260 52.632 171 32 9 449 610 1085 1215 8.21e-25 112
MS.gene059597.t1 MTR_6g087320 42.857 175 54 4 416 583 1185 1320 1.38e-20 99.0
MS.gene059597.t1 MTR_6g087320 47.904 167 24 9 452 610 1356 1467 2.78e-18 91.7
MS.gene059597.t1 MTR_0428s0040 48.193 166 23 9 452 609 48 158 1.14e-19 88.2
MS.gene059597.t1 MTR_6g003970 48.387 93 47 1 857 949 31 122 4.13e-16 81.6
MS.gene059597.t1 MTR_6g003970 32.124 193 92 6 607 798 22 176 1.23e-15 80.1
MS.gene059597.t1 MTR_6g003970 28.994 169 102 6 663 820 181 342 1.62e-12 70.5
MS.gene059597.t1 MTR_6g088250 53.333 105 25 3 449 546 1086 1173 5.45e-16 84.0
MS.gene059597.t1 MTR_6g087190 79.487 39 8 0 901 939 15 53 1.07e-14 70.1
MS.gene059597.t1 MTR_6g081090 87.179 39 5 0 847 885 5 43 1.11e-13 69.3
MS.gene059597.t1 MTR_2g039770 51.042 96 37 4 369 458 1163 1254 6.26e-13 73.9
MS.gene059597.t1 MTR_6g088260 62.295 61 18 1 449 509 1085 1140 9.70e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059597.t1 AT4G29060 56.980 1053 345 22 1 1047 1 951 0.0 1007
MS.gene059597.t1 AT4G29060 68.067 238 74 1 818 1053 482 719 2.60e-95 325
MS.gene059597.t1 AT4G29060 48.399 812 308 22 1 806 1 707 0.0 622
MS.gene059597.t1 AT4G29060 70.690 232 60 2 818 1047 482 707 6.59e-97 323
MS.gene059597.t1 AT4G11120 50.538 93 43 2 856 948 76 165 3.14e-16 82.8
MS.gene059597.t1 AT4G11120 43.478 92 51 1 615 706 76 166 2.14e-14 77.0
MS.gene059597.t1 AT4G11120 30.263 152 98 3 665 810 234 383 1.02e-12 71.6

Find 235 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGTGGCAGGACTTTC+AGG 0.148977 6.4:+61076946 None:intergenic
CCTGTTGCCAATGAAGTTTC+TGG 0.152029 6.4:-61078630 MS.gene059597:CDS
TCCGACAGGGCATGATATTA+TGG 0.206932 6.4:+61078890 None:intergenic
CATTTATAATACTTCCTTCT+TGG 0.224050 6.4:+61077704 None:intergenic
TTCCGTTTCTGTGGCTGATA+TGG 0.247171 6.4:+61078677 None:intergenic
GTTATTCTTTCTTGTCAAAT+AGG 0.268125 6.4:+61078842 None:intergenic
TTCCTTCGTCACAATAGTTT+CGG 0.269335 6.4:+61074312 None:intergenic
GATAATGGGAAAATCTTCTT+TGG 0.285488 6.4:-61078013 MS.gene059597:CDS
GAGGAAGATGACGATGGATT+TGG 0.287722 6.4:-61078039 MS.gene059597:CDS
ACACTGTCATCCTTAATAAA+AGG 0.290111 6.4:+61074175 None:intergenic
GCAAGCATACCTCAGGAAAA+AGG 0.290284 6.4:-61074548 MS.gene059597:CDS
TCCTTCAGCTGCCAGTCTTC+CGG 0.299109 6.4:+61074501 None:intergenic
CGATGGATTTGGGAAGATAA+TGG 0.301730 6.4:-61078028 MS.gene059597:CDS
ACCAAATCCTCATTCTTTAC+AGG 0.301884 6.4:+61078492 None:intergenic
CCTTGCAGGTCTTGAACGTT+TGG 0.306637 6.4:+61078530 None:intergenic
AACAGCTCCTTCCTTCTTCA+TGG 0.308813 6.4:+61077930 None:intergenic
TTTGGTGCGTTTGTTGATTT+CGG 0.315228 6.4:-61078426 MS.gene059597:CDS
TCTTTCCTTGGACCCGATTT+CGG 0.321232 6.4:+61078180 None:intergenic
CCGACAGGGCATGATATTAT+GGG 0.326824 6.4:+61078891 None:intergenic
CAGTAACAACATACTCTACT+TGG 0.337840 6.4:+61076001 None:intergenic
TGACAGCAGGATCGGTGTTT+TGG 0.339026 6.4:-61076115 MS.gene059597:CDS
TCCTGTAAAGAATGAGGATT+TGG 0.339661 6.4:-61078493 MS.gene059597:CDS
GGAAGGAGCTGTTGCAGAAT+TGG 0.340077 6.4:-61077920 MS.gene059597:CDS
GTTCAACCTCGGAGAGGGTT+TGG 0.342209 6.4:-61075737 MS.gene059597:CDS
CAAGAAGGAAGTATTATAAA+TGG 0.345251 6.4:-61077703 MS.gene059597:CDS
GTCTCAAGTGTTGTGTCTCT+TGG 0.346040 6.4:-61078345 MS.gene059597:CDS
GGAAAATCTTCTTTGGAGAT+TGG 0.353117 6.4:-61078006 MS.gene059597:CDS
AAGAATGAGGATTTGGTTCC+CGG 0.354645 6.4:-61078486 MS.gene059597:CDS
GGAAATTCTTCGGTTATTCC+TGG 0.356752 6.4:-61078870 MS.gene059597:CDS
TCCTTCGTCACAATAGTTTC+GGG 0.358591 6.4:+61074313 None:intergenic
CTTGTTCCAACTTCATTTGA+AGG 0.363120 6.4:+61078600 None:intergenic
TCTTTCACTGGAGTAGTTAC+CGG 0.365022 6.4:+61075661 None:intergenic
ATCTCTGATTCTGTAACAAC+AGG 0.365365 6.4:+61077391 None:intergenic
AGAGGCGGTTGCTGAAAGTT+TGG 0.370006 6.4:-61077662 MS.gene059597:CDS
TCTAAGGAGCTCTTGTGCTT+TGG 0.371836 6.4:+61076212 None:intergenic
TCCTTGGCTTCTGCGGCAGC+AGG 0.372285 6.4:+61075634 None:intergenic
CACTTTATCATTCTTGATGT+AGG 0.372974 6.4:+61075831 None:intergenic
AGGAAGATGACGATGGATTT+GGG 0.384366 6.4:-61078038 MS.gene059597:CDS
AAGCAGACAATTGCAACTAT+TGG 0.386183 6.4:-61075790 MS.gene059597:CDS
CCTTCCTTCGGCAGTTGCTC+TGG 0.387279 6.4:+61076155 None:intergenic
AGCAACTTATCTAACTCTAA+TGG 0.392584 6.4:-61076853 MS.gene059597:CDS
TCTTCAACTTGTGCTGATAC+AGG 0.393393 6.4:+61076907 None:intergenic
ATGCGTGAAAACACTGATAC+TGG 0.393930 6.4:-61078261 MS.gene059597:CDS
CTACGAAAAGCCAATACAAA+AGG 0.395148 6.4:+61077856 None:intergenic
CACGAAATTTGTTGTAGGTC+AGG 0.395926 6.4:-61078148 MS.gene059597:CDS
GAGGTGGGATTCTCCGAAAT+CGG 0.402919 6.4:-61078193 MS.gene059597:CDS
TAAAGTGACAGTAAAGGATA+TGG 0.403790 6.4:-61075815 MS.gene059597:CDS
CCTTTATTCAAGCTTTCCTC+AGG 0.405283 6.4:+61077119 None:intergenic
ACTTTATCATTCTTGATGTA+GGG 0.407592 6.4:+61075832 None:intergenic
TTCAGGAGAGGGAAGTTGAT+TGG 0.408068 6.4:+61076963 None:intergenic
AGAAATCCTTCCTCTCCTTC+AGG 0.415362 6.4:+61078072 None:intergenic
AAGCAACTTCGGGACGAAAC+AGG 0.415386 6.4:-61076288 MS.gene059597:CDS
TGTTGTAGGTCAGGAGTTGC+AGG 0.415982 6.4:-61078139 MS.gene059597:CDS
TTTCCTTCATTTGTCGCCAA+TGG 0.416640 6.4:-61078753 MS.gene059597:CDS
TTACTTTGGTTCAGTCTCCT+TGG 0.419163 6.4:+61075618 None:intergenic
GATGGATTTGGGAAGATAAT+GGG 0.421467 6.4:-61078027 MS.gene059597:CDS
CTTTCATCAGCCACGTCAAC+CGG 0.421811 6.4:+61077550 None:intergenic
TCTTGCACCTCTTCAGTGGC+AGG 0.429761 6.4:+61076937 None:intergenic
ATTTGATCAGCCACTTCAAC+CGG 0.430618 6.4:+61077508 None:intergenic
AATGCAGAGAAATCCGGCTC+TGG 0.431146 6.4:-61078216 MS.gene059597:CDS
ACTCCTTGAAAAGTTGAGTC+TGG 0.432066 6.4:+61078812 None:intergenic
GTAAAATCTATCCAACCATT+TGG 0.434906 6.4:-61078444 MS.gene059597:CDS
AGAAATCCGGCTCTGGGAGG+TGG 0.435137 6.4:-61078209 MS.gene059597:CDS
TGCACAAACTACAGCAAAAC+CGG 0.435471 6.4:-61075680 MS.gene059597:CDS
CCTGGTGTTTCTTGAGGAGC+TGG 0.437084 6.4:+61077355 None:intergenic
TTATAGTGAAAGACTTGGTT+AGG 0.442018 6.4:-61074153 MS.gene059597:CDS
GCAGCAGGCTCCTCTTTCAC+TGG 0.443676 6.4:+61075649 None:intergenic
TCTAACTCTAATGGACAAAC+TGG 0.444131 6.4:-61076844 MS.gene059597:CDS
GAAAACCTTGTAAGCTATGC+TGG 0.445394 6.4:+61074040 None:intergenic
TTCTTTCTTCACGAATTCCT+CGG 0.445395 6.4:+61075969 None:intergenic
CCAGAAACTTCATTGGCAAC+AGG 0.445959 6.4:+61078630 None:intergenic
ACTCCATTGGCGACAAATGA+AGG 0.446283 6.4:+61078750 None:intergenic
TCGTCATCTTCCTCAGCTAA+TGG 0.453821 6.4:+61078048 None:intergenic
GCCTGCTGCCGCAGAAGCCA+AGG 0.455636 6.4:-61075635 MS.gene059597:CDS
GGAAGAATCTCAAAGAGGTT+AGG 0.459157 6.4:-61074220 MS.gene059597:CDS
AGGCAAAGTATAGCTGCTAT+TGG 0.460091 6.4:-61074133 MS.gene059597:CDS
AGAAGATCTTGCGTCAAAAC+CGG 0.460563 6.4:-61075926 MS.gene059597:CDS
GAATCTCCTTCAAATGAAGT+TGG 0.462432 6.4:-61078606 MS.gene059597:CDS
AGGTGGGATTCTCCGAAATC+GGG 0.464270 6.4:-61078192 MS.gene059597:CDS
AGATTCACCAGAAACTTCAT+TGG 0.465353 6.4:+61078623 None:intergenic
CCTGAGGAAAGCTTGAATAA+AGG 0.465580 6.4:-61077119 MS.gene059597:intron
CGAAGTTGCTTCACAAGTGC+TGG 0.465644 6.4:+61076300 None:intergenic
GGCATTACTGCTTCAGATGA+AGG 0.466224 6.4:-61076823 MS.gene059597:CDS
ATGCCCTGTCGGAAATTCTT+CGG 0.466312 6.4:-61078880 MS.gene059597:CDS
TGAAAGTTACAAGGTTTGTT+CGG 0.466730 6.4:-61075759 MS.gene059597:CDS
AGTAGTGGTCTCAGCCGCTT+TGG 0.466995 6.4:-61074656 MS.gene059597:CDS
AGAAACCGGTGCAGGGATGA+TGG 0.468491 6.4:-61074617 MS.gene059597:CDS
CAGCACTTGTGAAGCAACTT+CGG 0.472018 6.4:-61076299 MS.gene059597:CDS
TGATAAGAAATCCGGAAGAC+TGG 0.475292 6.4:-61074512 MS.gene059597:CDS
ATCCTTGATCTAATTTGCTC+CGG 0.478542 6.4:+61075907 None:intergenic
CGAAACAGGAGCTGGAATGA+TGG 0.479672 6.4:-61076274 MS.gene059597:CDS
ACAAGCGAATATGCTCTTAC+CGG 0.485263 6.4:-61078716 MS.gene059597:CDS
TGTTGATTTCGGAGCTTTCA+CGG 0.487404 6.4:-61078415 MS.gene059597:CDS
TCGAACAATGCAGAGAAATC+CGG 0.493006 6.4:-61078222 MS.gene059597:CDS
GTAAGAACCTATCCTTCCTT+CGG 0.495021 6.4:+61076143 None:intergenic
AACTGAAGGTGATCTTGAAA+AGG 0.495747 6.4:-61074572 MS.gene059597:CDS
TTTCCCCGTAAAAGCTGCCC+CGG 0.497340 6.4:+61078467 None:intergenic
GATAGTGATGCAGTTGAGCC+TGG 0.497635 6.4:-61077415 MS.gene059597:CDS
ATTAGATCAAGGATTGTTGA+AGG 0.498357 6.4:-61075898 MS.gene059597:CDS
GCAAGTTGCTGCTTGTCCAC+AGG 0.499547 6.4:-61074362 MS.gene059597:CDS
AGAAACTGTGGAAGATTCAC+TGG 0.500295 6.4:-61077764 MS.gene059597:CDS
CGATTCCTCGACAACTGTTG+TGG 0.502643 6.4:-61077740 MS.gene059597:CDS
AAACACCGATCCTGCTGTCA+TGG 0.503436 6.4:+61076118 None:intergenic
TTCCATATCAGCCACAGAAA+CGG 0.506507 6.4:-61078679 MS.gene059597:CDS
TCTTTCTTCACGAATTCCTC+GGG 0.506603 6.4:+61075970 None:intergenic
CTCACTTCTGCCAACAAAGT+CGG 0.506846 6.4:+61074417 None:intergenic
CTTGTCAAATAGGCAACTCC+AGG 0.508349 6.4:+61078852 None:intergenic
TACGAAAAGCCAATACAAAA+GGG 0.522460 6.4:+61077857 None:intergenic
AAATCAACAAACGCACCAAA+TGG 0.523061 6.4:+61078429 None:intergenic
GGCTTTCGTAGAACCAGTGT+TGG 0.523954 6.4:+61078551 None:intergenic
GATTCTGTAACAACAGGGCC+AGG 0.526402 6.4:+61077397 None:intergenic
AGTAACAACATACTCTACTT+GGG 0.527067 6.4:+61076002 None:intergenic
TGGCAGAAGTGAGAAATTCA+AGG 0.527151 6.4:-61074407 MS.gene059597:CDS
AACCGGAGCAAATTAGATCA+AGG 0.527437 6.4:-61075909 MS.gene059597:CDS
AAGTGAGAAATTCAAGGAGT+TGG 0.528224 6.4:-61074401 MS.gene059597:CDS
TATAAATGGTGCCGCTGAGA+AGG 0.528405 6.4:-61077689 MS.gene059597:CDS
CCAGTGTTGGCATCAGACTT+AGG 0.528888 6.4:+61078564 None:intergenic
TCATCCGCTGATAAGAAATC+CGG 0.529747 6.4:-61074520 MS.gene059597:CDS
AGCACTTGTGAAGCAACTTC+GGG 0.530877 6.4:-61076298 MS.gene059597:CDS
AGAATCCCACCTCCCAGAGC+CGG 0.531201 6.4:+61078203 None:intergenic
AACTGACTCACCGGTTGAAG+TGG 0.534688 6.4:-61077518 MS.gene059597:CDS
GTCTCTTGGACAAGAAGTTA+CGG 0.535794 6.4:-61078331 MS.gene059597:CDS
CTTTATTCAAGCTTTCCTCA+GGG 0.535989 6.4:+61077120 None:intergenic
AACTGCATCACTATCTTCCT+CGG 0.536447 6.4:+61077423 None:intergenic
TGTTCTCGGGTTTCGAAGCA+AGG 0.537039 6.4:+61074263 None:intergenic
CTACGAGAAGAAACCGGTGC+AGG 0.539828 6.4:-61074625 MS.gene059597:CDS
CAACAAACGCACCAAATGGT+TGG 0.540062 6.4:+61078433 None:intergenic
TACATTCACGATGCACGCAT+TGG 0.540085 6.4:-61074466 MS.gene059597:CDS
CAAGAACCTGGTGTTTCTTG+AGG 0.540517 6.4:+61077349 None:intergenic
AACTGTGAAACCGACTTTGT+TGG 0.542867 6.4:-61074427 MS.gene059597:CDS
GAGAAAATATGAAAGTTACA+AGG 0.544236 6.4:-61075768 MS.gene059597:CDS
AAGCAACTACGAGAAGAAAC+CGG 0.544505 6.4:-61074631 MS.gene059597:CDS
CTGGCAGCTGAAGGAAGAAT+CGG 0.544679 6.4:-61074493 MS.gene059597:CDS
CCCATAATATCATGCCCTGT+CGG 0.544867 6.4:-61078891 MS.gene059597:CDS
CTTCGGGACGAAACAGGAGC+TGG 0.545385 6.4:-61076282 MS.gene059597:CDS
TCAGATGAAGGATCGAGTAA+AGG 0.545714 6.4:-61076811 MS.gene059597:intron
AAAAGGCGCAAGCATACCTC+AGG 0.548541 6.4:-61074555 MS.gene059597:CDS
CACGGATACTTCCGTTTCTG+TGG 0.549084 6.4:+61078668 None:intergenic
ATTTCTTATCAGCGGATGAG+AGG 0.549418 6.4:+61074524 None:intergenic
ATGCAGAGAAATCCGGCTCT+GGG 0.550324 6.4:-61078215 MS.gene059597:CDS
GTGGCAGGACTTTCAGGAGA+GGG 0.550624 6.4:+61076952 None:intergenic
GTTCGGTTCAACCTCGGAGA+GGG 0.551728 6.4:-61075742 MS.gene059597:CDS
AGCGACATTGACCATGAAGA+AGG 0.553562 6.4:-61077941 MS.gene059597:CDS
GGTAACTACTCCAGTGAAAG+AGG 0.553754 6.4:-61075659 MS.gene059597:CDS
GCAGCCAGAGCAACTGCCGA+AGG 0.554999 6.4:-61076159 MS.gene059597:CDS
ATCACCTTCAGTTTCAGCAA+GGG 0.556148 6.4:+61074582 None:intergenic
CAAGGAGTTCTTTAAGACAC+GGG 0.556289 6.4:-61078797 MS.gene059597:CDS
GGACAAGGCACTTGCACAAG+TGG 0.557097 6.4:-61077899 MS.gene059597:CDS
CCAGAGCAACTGCCGAAGGA+AGG 0.558061 6.4:-61076155 MS.gene059597:CDS
AACTGACTCACCGGTTGACG+TGG 0.558529 6.4:-61077560 MS.gene059597:CDS
TACATCCATGACAGCAGGAT+CGG 0.561063 6.4:-61076123 MS.gene059597:CDS
ATTCTCCGAAATCGGGTCCA+AGG 0.561858 6.4:-61078185 MS.gene059597:CDS
GTTCTTACATCCATGACAGC+AGG 0.562189 6.4:-61076128 MS.gene059597:CDS
GAATGATAAAGTGACAGTAA+AGG 0.564402 6.4:-61075821 MS.gene059597:CDS
TGAAAGTCCTGCCACTGAAG+AGG 0.565352 6.4:-61076944 MS.gene059597:CDS
TTTAATAGAAACTGACTCAC+CGG 0.565786 6.4:-61077527 MS.gene059597:CDS
AGAATGAGGATTTGGTTCCC+GGG 0.569157 6.4:-61078485 MS.gene059597:CDS
GAAATCCGGCTCTGGGAGGT+GGG 0.570627 6.4:-61078208 MS.gene059597:CDS
TTGTTCTTGCACCTCTTCAG+TGG 0.570826 6.4:+61076933 None:intergenic
AGGTCAGGAGTTGCAGGGTA+CGG 0.571288 6.4:-61078133 MS.gene059597:CDS
GGATTGTTGAAGGACGGATA+AGG 0.572423 6.4:-61075888 MS.gene059597:CDS
GATCAAGGATTGTTGAAGGA+CGG 0.572700 6.4:-61075894 MS.gene059597:CDS
ACAGTCCATCATCCCTGCAC+CGG 0.573161 6.4:+61074612 None:intergenic
GTTGAGTGATAGCTTTGTAA+AGG 0.577562 6.4:-61078370 MS.gene059597:CDS
CAACGTTGAAACTGACTCAC+CGG 0.581016 6.4:-61077569 MS.gene059597:CDS
GCAACTGCCGAAGGAAGGAT+AGG 0.582552 6.4:-61076150 MS.gene059597:CDS
TCACTTCCTGAAGGAGAGGA+AGG 0.585290 6.4:-61078078 MS.gene059597:CDS
GTAACAACATACTCTACTTG+GGG 0.587126 6.4:+61076003 None:intergenic
TCCGGAAGACTGGCAGCTGA+AGG 0.588358 6.4:-61074502 MS.gene059597:CDS
ATAACCGAAGAATTTCCGAC+AGG 0.588538 6.4:+61078876 None:intergenic
GGAATTCGTGAAGAAAGAAA+CGG 0.588747 6.4:-61075965 MS.gene059597:CDS
TATATCACTTCCTGAAGGAG+AGG 0.589228 6.4:-61078082 MS.gene059597:CDS
CCTAAGTCTGATGCCAACAC+TGG 0.589932 6.4:-61078564 MS.gene059597:CDS
GAGCATATTCGCTTGTTCTG+AGG 0.590286 6.4:+61078723 None:intergenic
GTGCAGGAAATCAGCAGTAG+TGG 0.596207 6.4:-61074671 MS.gene059597:intron
GGGTTTGGAAAAGAAAAGCG+AGG 0.599000 6.4:-61075722 MS.gene059597:CDS
GAATGAGGATTTGGTTCCCG+GGG 0.599120 6.4:-61078484 MS.gene059597:CDS
AATGCTCTTTCTGAAAGTGA+AGG 0.599535 6.4:-61076243 MS.gene059597:CDS
CAGTGTTATAGTGAAAGACT+TGG 0.599905 6.4:-61074158 MS.gene059597:CDS
AGCGTCCACAACAGTTGTCG+AGG 0.600792 6.4:+61077735 None:intergenic
TTCAGTCTCCTTGGCTTCTG+CGG 0.601937 6.4:+61075627 None:intergenic
TCAAGGAGTTCTTTAAGACA+CGG 0.602455 6.4:-61078798 MS.gene059597:CDS
TGCTGTAAATTCAATTATCG+AGG 0.603012 6.4:-61077620 MS.gene059597:CDS
TGAAGCAGTTGCAATTGCAT+CGG 0.603597 6.4:-61076884 MS.gene059597:CDS
TCCCGAAACTATTGTGACGA+AGG 0.603689 6.4:-61074314 MS.gene059597:CDS
AGGTTTGTTCGGTTCAACCT+CGG 0.604002 6.4:-61075748 MS.gene059597:CDS
AAATCCTCATTCTTTACAGG+AGG 0.604341 6.4:+61078495 None:intergenic
AATGCCTCCTGTAAAGAATG+AGG 0.604427 6.4:-61078499 MS.gene059597:CDS
GTTGTAGGTCAGGAGTTGCA+GGG 0.609211 6.4:-61078138 MS.gene059597:CDS
ATCAGAAACTGACAATGGAA+AGG 0.610096 6.4:-61077464 MS.gene059597:CDS
ACATTGACCATGAAGAAGGA+AGG 0.610935 6.4:-61077937 MS.gene059597:CDS
GACGCTGAAAGCAACCAAGA+AGG 0.613970 6.4:-61077718 MS.gene059597:CDS
AAAGCCCTTGCTGAAACTGA+AGG 0.615327 6.4:-61074586 MS.gene059597:CDS
ATAGATACAAACTGAACCTG+TGG 0.617602 6.4:+61074346 None:intergenic
AGGATTTCTACCATTAGCTG+AGG 0.618726 6.4:-61078058 MS.gene059597:CDS
AGAATTTGTAGCTGCAACCG+AGG 0.619096 6.4:-61077440 MS.gene059597:CDS
TAAGACACGGGTCATCAACT+CGG 0.619669 6.4:-61078785 MS.gene059597:CDS
ATCATCAACTACAGAAACTG+TGG 0.620439 6.4:-61077776 MS.gene059597:CDS
TACGAGAAGAAACCGGTGCA+GGG 0.620957 6.4:-61074624 MS.gene059597:CDS
GATCACCTTCAGTTTCAGCA+AGG 0.621026 6.4:+61074581 None:intergenic
CATTAGAGAGAAAATTGTCG+AGG 0.623126 6.4:-61074242 MS.gene059597:CDS
GATTTCGGAGCTTTCACGGA+CGG 0.623504 6.4:-61078411 MS.gene059597:CDS
TTCCCCGTAAAAGCTGCCCC+GGG 0.627643 6.4:+61078468 None:intergenic
AAACAATCAGAAACTGACAA+TGG 0.627847 6.4:-61077469 MS.gene059597:CDS
ACGGATAAGGAAAAGACTTG+AGG 0.629079 6.4:-61075875 MS.gene059597:CDS
ATTAGAGAGAAAATTGTCGA+GGG 0.630225 6.4:-61074241 MS.gene059597:CDS
TCTTCCGGATTTCTTATCAG+CGG 0.630776 6.4:+61074516 None:intergenic
CGCTGAGAAGGAAACAGAGG+CGG 0.632734 6.4:-61077677 MS.gene059597:CDS
CCAGCTCCTCAAGAAACACC+AGG 0.634532 6.4:-61077355 MS.gene059597:intron
AGGTGAATCTTGTACCTCCA+CGG 0.639783 6.4:+61078650 None:intergenic
CACAGAAACGGAAGTATCCG+TGG 0.640815 6.4:-61078667 MS.gene059597:CDS
TGTTCGGTTCAACCTCGGAG+AGG 0.640909 6.4:-61075743 MS.gene059597:CDS
TGGACAAGAAGTTACGGTGA+AGG 0.643574 6.4:-61078325 MS.gene059597:CDS
TTTATTCAAGCTTTCCTCAG+GGG 0.650245 6.4:+61077121 None:intergenic
TGATGCTAGTTTGTCCCCTG+AGG 0.651987 6.4:-61077135 MS.gene059597:CDS
AGCTGTTGCAGAATTGGACA+AGG 0.653686 6.4:-61077914 MS.gene059597:CDS
TCGTAGTTGCTTAACCAAAG+CGG 0.653913 6.4:+61074642 None:intergenic
CGCCTCTGTTTCCTTCTCAG+CGG 0.656717 6.4:+61077678 None:intergenic
GACAAGGCACTTGCACAAGT+GGG 0.662224 6.4:-61077898 MS.gene059597:CDS
GTGAAGAATATGACGAGGAG+TGG 0.674205 6.4:-61078111 MS.gene059597:CDS
AGTGGCAGGACTTTCAGGAG+AGG 0.675717 6.4:+61076951 None:intergenic
TAACCGAAGAATTTCCGACA+GGG 0.678164 6.4:+61078877 None:intergenic
CCAAACGTTCAAGACCTGCA+AGG 0.680041 6.4:-61078530 MS.gene059597:CDS
CGATGATATAGCAATGCAAG+TGG 0.680068 6.4:-61076034 MS.gene059597:CDS
CAGAGAAATCCGGCTCTGGG+AGG 0.680505 6.4:-61078212 MS.gene059597:CDS
AGTGGCTGATCAAATTGTTG+CGG 0.682112 6.4:-61077500 MS.gene059597:CDS
TGCCGCTGAGAAGGAAACAG+AGG 0.682448 6.4:-61077680 MS.gene059597:CDS
TCGAGGGAAGAATCTCAAAG+AGG 0.687349 6.4:-61074225 MS.gene059597:CDS
TCTCTGATTCTGTAACAACA+GGG 0.691768 6.4:+61077392 None:intergenic
TGTTACTGAAGACGTTCCCG+AGG 0.694056 6.4:-61075986 MS.gene059597:CDS
TTGGAGAGAATATTAAAGTG+CGG 0.701032 6.4:-61074114 MS.gene059597:CDS
TTAGCTGAGGAAGATGACGA+TGG 0.704035 6.4:-61078045 MS.gene059597:CDS
TAACAACATACTCTACTTGG+GGG 0.727944 6.4:+61076004 None:intergenic
GTACGGTGAAGAATATGACG+AGG 0.743517 6.4:-61078116 MS.gene059597:CDS
AGAAACGGAAGTATCCGTGG+AGG 0.788331 6.4:-61078664 MS.gene059597:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTATTTAATTATGAAATTT+TGG - chr6.4:61077388-61077407 MS.gene059597:CDS 10.0%
!! AATTATGGAAATTTCATAAT+GGG + chr6.4:61077812-61077831 None:intergenic 15.0%
!! ATTACATATTCAATTAATCA+AGG - chr6.4:61077561-61077580 MS.gene059597:CDS 15.0%
!! GTATTTATATATGGAAATAT+TGG - chr6.4:61075640-61075659 MS.gene059597:CDS 15.0%
!! TAAAAACAAAAATGAAGTTT+GGG + chr6.4:61077533-61077552 None:intergenic 15.0%
!! TAATTATGGAAATTTCATAA+TGG + chr6.4:61077813-61077832 None:intergenic 15.0%
!! TTAAAAACAAAAATGAAGTT+TGG + chr6.4:61077534-61077553 None:intergenic 15.0%
!! TTATCTTATAAGCTTAAATT+AGG - chr6.4:61076508-61076527 MS.gene059597:intron 15.0%
!!! ACTTCATTTTTGTTTTTAAA+AGG - chr6.4:61077535-61077554 MS.gene059597:CDS 15.0%
!!! ATATATCATGTCAATTTTAA+TGG + chr6.4:61077629-61077648 None:intergenic 15.0%
!!! TTTGATTTTAGCTATAATTT+CGG + chr6.4:61075680-61075699 None:intergenic 15.0%
!! ATCTCATTCGTATTTATATA+TGG - chr6.4:61075631-61075650 MS.gene059597:CDS 20.0%
!! CATTAACTTTATGTACTAAT+TGG - chr6.4:61077860-61077879 MS.gene059597:CDS 20.0%
!! TATTAAATTGTTCAATGTTG+TGG - chr6.4:61078258-61078277 MS.gene059597:CDS 20.0%
!! TTATCTAAGAATTCAAAGAT+AGG + chr6.4:61076574-61076593 None:intergenic 20.0%
!! TTTAAAAACATCAACAATGT+TGG - chr6.4:61077507-61077526 MS.gene059597:CDS 20.0%
!!! TAAGCAAAAAACTACATTTT+AGG - chr6.4:61076309-61076328 MS.gene059597:CDS 20.0%
!!! TAAGGATATTGCTAAATTTT+TGG - chr6.4:61075121-61075140 MS.gene059597:intron 20.0%
!!! TGGCTTTTAAATTAAGTTAA+AGG - chr6.4:61077768-61077787 MS.gene059597:CDS 20.0%
! ACATCATTTGTAAAAAGAGT+AGG + chr6.4:61077935-61077954 None:intergenic 25.0%
! ACTTTATCATTCTTGATGTA+GGG + chr6.4:61077122-61077141 None:intergenic 25.0%
! ATGAAGCAAATAAGATGAAA+TGG + chr6.4:61076169-61076188 None:intergenic 25.0%
! ATTAACTTTGAATCCTCAAT+CGG - chr6.4:61075947-61075966 MS.gene059597:CDS 25.0%
! ATTGAGGATTCAAAGTTAAT+AGG + chr6.4:61075947-61075966 None:intergenic 25.0%
! CAAAGTTAATAGGATACTAT+AGG + chr6.4:61075937-61075956 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG - chr6.4:61076334-61076353 MS.gene059597:intron 25.0%
! CATTTATAATACTTCCTTCT+TGG + chr6.4:61075250-61075269 None:intergenic 25.0%
! GACTAATTTGACACAAAAAA+CGG - chr6.4:61077737-61077756 MS.gene059597:CDS 25.0%
! GAGAAAATATGAAAGTTACA+AGG - chr6.4:61077183-61077202 MS.gene059597:intron 25.0%
! GTTATTCTTTCTTGTCAAAT+AGG + chr6.4:61074112-61074131 None:intergenic 25.0%
! TGTTTACTTTGGCATAATTA+TGG + chr6.4:61077827-61077846 None:intergenic 25.0%
!! AAGAAATAACTAGTTTGACA+TGG + chr6.4:61077458-61077477 None:intergenic 25.0%
!! AATTTTCTCTCTAATGTTCT+CGG + chr6.4:61078705-61078724 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr6.4:61076408-61076427 MS.gene059597:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + chr6.4:61076299-61076318 None:intergenic 25.0%
!!! AAAAACACGAAATTTGTTGT+AGG - chr6.4:61074798-61074817 MS.gene059597:intron 25.0%
!!! AAATTTTGGTAATTAGTACC+TGG - chr6.4:61077402-61077421 MS.gene059597:CDS 25.0%
!!! CAAGAAGGAAGTATTATAAA+TGG - chr6.4:61075248-61075267 MS.gene059597:intron 25.0%
!!! CCATTTTTTTCTCAAAGTTT+GGG + chr6.4:61078222-61078241 None:intergenic 25.0%
!!! GTTGATGTTTTTAAACAAAG+AGG + chr6.4:61077502-61077521 None:intergenic 25.0%
!!! TCCATTTTTTTCTCAAAGTT+TGG + chr6.4:61078223-61078242 None:intergenic 25.0%
AAAAAAGAATATACACCCTC+CGG - chr6.4:61076277-61076296 MS.gene059597:CDS 30.0%
AAACAATCAGAAACTGACAA+TGG - chr6.4:61075482-61075501 MS.gene059597:intron 30.0%
AAATTAAGTTAAAGGAACCC+TGG - chr6.4:61077776-61077795 MS.gene059597:CDS 30.0%
ACACTGTCATCCTTAATAAA+AGG + chr6.4:61078779-61078798 None:intergenic 30.0%
AGCAACTTATCTAACTCTAA+TGG - chr6.4:61076098-61076117 MS.gene059597:CDS 30.0%
AGGATACTATAGGAAAAGAA+AGG + chr6.4:61075927-61075946 None:intergenic 30.0%
AGGTTAGGGTTAAAATATTC+AGG + chr6.4:61078011-61078030 None:intergenic 30.0%
AGTAACAACATACTCTACTT+GGG + chr6.4:61076952-61076971 None:intergenic 30.0%
ATTAGAGAGAAAATTGTCGA+GGG - chr6.4:61078710-61078729 MS.gene059597:CDS 30.0%
ATTAGATCAAGGATTGTTGA+AGG - chr6.4:61077053-61077072 MS.gene059597:intron 30.0%
CACTTTATCATTCTTGATGT+AGG + chr6.4:61077123-61077142 None:intergenic 30.0%
GAAATCTACAAACTGTACAA+GGG - chr6.4:61077974-61077993 MS.gene059597:CDS 30.0%
GAATGATAAAGTGACAGTAA+AGG - chr6.4:61077130-61077149 MS.gene059597:CDS 30.0%
GACATGGAAAAAAAAAGTCA+AGG + chr6.4:61077442-61077461 None:intergenic 30.0%
GATACTATAGGAAAAGAAAG+GGG + chr6.4:61075925-61075944 None:intergenic 30.0%
GGATACTATAGGAAAAGAAA+GGG + chr6.4:61075926-61075945 None:intergenic 30.0%
GTAAAATCTATCCAACCATT+TGG - chr6.4:61074507-61074526 MS.gene059597:CDS 30.0%
TAAAGTGACAGTAAAGGATA+TGG - chr6.4:61077136-61077155 MS.gene059597:CDS 30.0%
TACGAAAAGCCAATACAAAA+GGG + chr6.4:61075097-61075116 None:intergenic 30.0%
TAGAAAACTATGACCTTGTT+TGG + chr6.4:61076542-61076561 None:intergenic 30.0%
TGAAATCTACAAACTGTACA+AGG - chr6.4:61077973-61077992 MS.gene059597:CDS 30.0%
TGCTAAAATATTCCAGCAAT+GGG - chr6.4:61077893-61077912 MS.gene059597:CDS 30.0%
TGCTGTAAATTCAATTATCG+AGG - chr6.4:61075331-61075350 MS.gene059597:intron 30.0%
TTGACACAAAAAACGGATAA+AGG - chr6.4:61077744-61077763 MS.gene059597:CDS 30.0%
TTGGAGAGAATATTAAAGTG+CGG - chr6.4:61078837-61078856 MS.gene059597:CDS 30.0%
! ACTTTTATATCACTTCCTGA+AGG - chr6.4:61074864-61074883 MS.gene059597:intron 30.0%
! ATTTTCTCTCTAATGTTCTC+GGG + chr6.4:61078704-61078723 None:intergenic 30.0%
! CCCAAACTTTGAGAAAAAAA+TGG - chr6.4:61078219-61078238 MS.gene059597:CDS 30.0%
! GCATTTTGTAAACTTACTAC+TGG + chr6.4:61078163-61078182 None:intergenic 30.0%
! GTCATCTATTTGAAATGCAA+AGG + chr6.4:61075764-61075783 None:intergenic 30.0%
! GTGTTTTTCTTATCTTTCCT+TGG + chr6.4:61074786-61074805 None:intergenic 30.0%
! TATGCCAAAGTAAACACTTT+TGG - chr6.4:61077831-61077850 MS.gene059597:CDS 30.0%
! TGAAAGTTACAAGGTTTGTT+CGG - chr6.4:61077192-61077211 MS.gene059597:intron 30.0%
! TTAGGTTGTTTATCCAAACA+AGG - chr6.4:61076526-61076545 MS.gene059597:intron 30.0%
! TTATAGTGAAAGACTTGGTT+AGG - chr6.4:61078798-61078817 MS.gene059597:CDS 30.0%
! TTTAATAGAAACTGACTCAC+CGG - chr6.4:61075424-61075443 MS.gene059597:intron 30.0%
!! ATCACCAAAAGTGTTTACTT+TGG + chr6.4:61077838-61077857 None:intergenic 30.0%
!! GATAATGGGAAAATCTTCTT+TGG - chr6.4:61074938-61074957 MS.gene059597:intron 30.0%
!! TGCTAAATTTTTGGATCAGA+GGG - chr6.4:61075130-61075149 MS.gene059597:intron 30.0%
!! TTGCTAAATTTTTGGATCAG+AGG - chr6.4:61075129-61075148 MS.gene059597:intron 30.0%
!!! ATTGGCTTTTCGTAGAAATA+AGG - chr6.4:61075103-61075122 MS.gene059597:intron 30.0%
AAATCAACAAACGCACCAAA+TGG + chr6.4:61074525-61074544 None:intergenic 35.0%
AAATCATACAGTCACAGCTT+AGG + chr6.4:61078067-61078086 None:intergenic 35.0%
AAATCCTCATTCTTTACAGG+AGG + chr6.4:61074459-61074478 None:intergenic 35.0%
AACTGAAGGTGATCTTGAAA+AGG - chr6.4:61078379-61078398 MS.gene059597:CDS 35.0%
AAGAATAACTCGAGAAGGTT+AGG + chr6.4:61078026-61078045 None:intergenic 35.0%
AAGCAGACAATTGCAACTAT+TGG - chr6.4:61077161-61077180 MS.gene059597:CDS 35.0%
AAGTGAGAAATTCAAGGAGT+TGG - chr6.4:61078550-61078569 MS.gene059597:CDS 35.0%
ACCAAATCCTCATTCTTTAC+AGG + chr6.4:61074462-61074481 None:intergenic 35.0%
AGAATAACTCGAGAAGGTTA+GGG + chr6.4:61078025-61078044 None:intergenic 35.0%
AGATTCACCAGAAACTTCAT+TGG + chr6.4:61074331-61074350 None:intergenic 35.0%
ATAGATACAAACTGAACCTG+TGG + chr6.4:61078608-61078627 None:intergenic 35.0%
ATAGCAAGAATAACTCGAGA+AGG + chr6.4:61078031-61078050 None:intergenic 35.0%
ATATAGTTGCTGCAATCCAA+AGG + chr6.4:61076629-61076648 None:intergenic 35.0%
ATCAGAAACTGACAATGGAA+AGG - chr6.4:61075487-61075506 MS.gene059597:intron 35.0%
ATCATCAACTACAGAAACTG+TGG - chr6.4:61075175-61075194 MS.gene059597:intron 35.0%
ATCTCTGATTCTGTAACAAC+AGG + chr6.4:61075563-61075582 None:intergenic 35.0%
CAAGAGCTCCTTAGAAAAAA+AGG - chr6.4:61076747-61076766 MS.gene059597:intron 35.0%
CACAAAAAACGGATAAAGGA+TGG - chr6.4:61077748-61077767 MS.gene059597:CDS 35.0%
CAGTAACAACATACTCTACT+TGG + chr6.4:61076953-61076972 None:intergenic 35.0%
CAGTGTTATAGTGAAAGACT+TGG - chr6.4:61078793-61078812 MS.gene059597:CDS 35.0%
CATTAGAGAGAAAATTGTCG+AGG - chr6.4:61078709-61078728 MS.gene059597:CDS 35.0%
CTACGAAAAGCCAATACAAA+AGG + chr6.4:61075098-61075117 None:intergenic 35.0%
CTTGTTCCAACTTCATTTGA+AGG + chr6.4:61074354-61074373 None:intergenic 35.0%
CTTTATTCAAGCTTTCCTCA+GGG + chr6.4:61075834-61075853 None:intergenic 35.0%
GAATCTCCTTCAAATGAAGT+TGG - chr6.4:61074345-61074364 MS.gene059597:CDS 35.0%
GAATTCAAAGATAGGTGAAC+AGG + chr6.4:61076566-61076585 None:intergenic 35.0%
GAGGACTAACTAACTTAACA+CGG + chr6.4:61077483-61077502 None:intergenic 35.0%
GGAATTCGTGAAGAAAGAAA+CGG - chr6.4:61076986-61077005 MS.gene059597:intron 35.0%
GTAACAACATACTCTACTTG+GGG + chr6.4:61076951-61076970 None:intergenic 35.0%
GTGCTAAAATATTCCAGCAA+TGG - chr6.4:61077892-61077911 MS.gene059597:CDS 35.0%
TAACAACATACTCTACTTGG+GGG + chr6.4:61076950-61076969 None:intergenic 35.0%
TATAGTTGCTGCAATCCAAA+GGG + chr6.4:61076628-61076647 None:intergenic 35.0%
TCATTGAACCACACTTACTT+TGG + chr6.4:61077350-61077369 None:intergenic 35.0%
TCCTGTAAAGAATGAGGATT+TGG - chr6.4:61074458-61074477 MS.gene059597:CDS 35.0%
TCTCTGATTCTGTAACAACA+GGG + chr6.4:61075562-61075581 None:intergenic 35.0%
TGAGATAGAAAACAAGAACC+TGG + chr6.4:61075617-61075636 None:intergenic 35.0%
TGTAAACTTACTACTGGTGT+CGG + chr6.4:61078157-61078176 None:intergenic 35.0%
TTCCTTCGTCACAATAGTTT+CGG + chr6.4:61078642-61078661 None:intergenic 35.0%
TTCTTTCTTCACGAATTCCT+CGG + chr6.4:61076985-61077004 None:intergenic 35.0%
TTTATTCAAGCTTTCCTCAG+GGG + chr6.4:61075833-61075852 None:intergenic 35.0%
! AATGCTCTTTCTGAAAGTGA+AGG - chr6.4:61076708-61076727 MS.gene059597:intron 35.0%
! GATGGATTTGGGAAGATAAT+GGG - chr6.4:61074924-61074943 MS.gene059597:intron 35.0%
! GGAAAATCTTCTTTGGAGAT+TGG - chr6.4:61074945-61074964 MS.gene059597:intron 35.0%
! TAACCAGACTCAACTTTTCA+AGG - chr6.4:61074136-61074155 MS.gene059597:CDS 35.0%
! TCTAACTCTAATGGACAAAC+TGG - chr6.4:61076107-61076126 MS.gene059597:CDS 35.0%
! TGGAAGTTCGAGAATTTTTC+CGG + chr6.4:61074257-61074276 None:intergenic 35.0%
!! ATCCTTGATCTAATTTGCTC+CGG + chr6.4:61077047-61077066 None:intergenic 35.0%
!! GTTGAGTGATAGCTTTGTAA+AGG - chr6.4:61074581-61074600 MS.gene059597:CDS 35.0%
!! TCAAGGAGTTCTTTAAGACA+CGG - chr6.4:61074153-61074172 MS.gene059597:CDS 35.0%
!! TCTAGAGCAGCCTTTTATTA+AGG - chr6.4:61078766-61078785 MS.gene059597:CDS 35.0%
!! TGAAAGCACTGACACAAATA+CGG - chr6.4:61078102-61078121 MS.gene059597:CDS 35.0%
!! TTTGGTGCGTTTGTTGATTT+CGG - chr6.4:61074525-61074544 MS.gene059597:CDS 35.0%
!!! TCGCTAAGCCTTTTTTTCTA+AGG + chr6.4:61076758-61076777 None:intergenic 35.0%
AACCGGAGCAAATTAGATCA+AGG - chr6.4:61077042-61077061 MS.gene059597:intron 40.0%
AACTGCATCACTATCTTCCT+CGG + chr6.4:61075531-61075550 None:intergenic 40.0%
AAGCAACTACGAGAAGAAAC+CGG - chr6.4:61078320-61078339 MS.gene059597:CDS 40.0%
AATGCCTCCTGTAAAGAATG+AGG - chr6.4:61074452-61074471 MS.gene059597:CDS 40.0%
ACAAGCGAATATGCTCTTAC+CGG - chr6.4:61074235-61074254 MS.gene059597:CDS 40.0%
ACATTGACCATGAAGAAGGA+AGG - chr6.4:61075014-61075033 MS.gene059597:intron 40.0%
ACGGATAAGGAAAAGACTTG+AGG - chr6.4:61077076-61077095 MS.gene059597:intron 40.0%
ACTCCTTGAAAAGTTGAGTC+TGG + chr6.4:61074142-61074161 None:intergenic 40.0%
AGAAACTGTGGAAGATTCAC+TGG - chr6.4:61075187-61075206 MS.gene059597:intron 40.0%
AGAAGATCTTGCGTCAAAAC+CGG - chr6.4:61077025-61077044 MS.gene059597:intron 40.0%
AGACTGAACCAAAGTAAGTG+TGG - chr6.4:61077339-61077358 MS.gene059597:intron 40.0%
AGGATTTCTACCATTAGCTG+AGG - chr6.4:61074893-61074912 MS.gene059597:intron 40.0%
AGGCAAAGTATAGCTGCTAT+TGG - chr6.4:61078818-61078837 MS.gene059597:CDS 40.0%
AGTGGCTGATCAAATTGTTG+CGG - chr6.4:61075451-61075470 MS.gene059597:intron 40.0%
ATAACCGAAGAATTTCCGAC+AGG + chr6.4:61074078-61074097 None:intergenic 40.0%
ATCACCTTCAGTTTCAGCAA+GGG + chr6.4:61078372-61078391 None:intergenic 40.0%
ATGCGTGAAAACACTGATAC+TGG - chr6.4:61074690-61074709 MS.gene059597:intron 40.0%
ATTGTTCAATGTTGTGGTGC+AGG - chr6.4:61078264-61078283 MS.gene059597:CDS 40.0%
ATTTCTTATCAGCGGATGAG+AGG + chr6.4:61078430-61078449 None:intergenic 40.0%
ATTTGATCAGCCACTTCAAC+CGG + chr6.4:61075446-61075465 None:intergenic 40.0%
CAAGCATACCTCAGGAAAAA+GGG - chr6.4:61078404-61078423 MS.gene059597:CDS 40.0%
CCTGAGGAAAGCTTGAATAA+AGG - chr6.4:61075832-61075851 MS.gene059597:CDS 40.0%
CCTTTATTCAAGCTTTCCTC+AGG + chr6.4:61075835-61075854 None:intergenic 40.0%
CGATGATATAGCAATGCAAG+TGG - chr6.4:61076917-61076936 MS.gene059597:CDS 40.0%
GATCAAGGATTGTTGAAGGA+CGG - chr6.4:61077057-61077076 MS.gene059597:intron 40.0%
GGAAATTCTTCGGTTATTCC+TGG - chr6.4:61074081-61074100 MS.gene059597:CDS 40.0%
GGAAGAATCTCAAAGAGGTT+AGG - chr6.4:61078731-61078750 MS.gene059597:CDS 40.0%
GTAAGAACCTATCCTTCCTT+CGG + chr6.4:61076811-61076830 None:intergenic 40.0%
GTCTCTTGGACAAGAAGTTA+CGG - chr6.4:61074620-61074639 MS.gene059597:CDS 40.0%
TAACCGAAGAATTTCCGACA+GGG + chr6.4:61074077-61074096 None:intergenic 40.0%
TAATGGGAAAAACGACACCA+GGG + chr6.4:61077796-61077815 None:intergenic 40.0%
TAGTACCTGGAGTTTCAAAC+AGG - chr6.4:61077415-61077434 MS.gene059597:CDS 40.0%
TATATCACTTCCTGAAGGAG+AGG - chr6.4:61074869-61074888 MS.gene059597:intron 40.0%
TCAGATGAAGGATCGAGTAA+AGG - chr6.4:61076140-61076159 MS.gene059597:CDS 40.0%
TCATCCGCTGATAAGAAATC+CGG - chr6.4:61078431-61078450 MS.gene059597:CDS 40.0%
TCCTTCGTCACAATAGTTTC+GGG + chr6.4:61078641-61078660 None:intergenic 40.0%
TCGAACAATGCAGAGAAATC+CGG - chr6.4:61074729-61074748 MS.gene059597:intron 40.0%
TCGTAGTTGCTTAACCAAAG+CGG + chr6.4:61078312-61078331 None:intergenic 40.0%
TCTTCCGGATTTCTTATCAG+CGG + chr6.4:61078438-61078457 None:intergenic 40.0%
TCTTTCACTGGAGTAGTTAC+CGG + chr6.4:61077293-61077312 None:intergenic 40.0%
TCTTTCTTCACGAATTCCTC+GGG + chr6.4:61076984-61077003 None:intergenic 40.0%
TGAAGCAGTTGCAATTGCAT+CGG - chr6.4:61076067-61076086 MS.gene059597:CDS 40.0%
TGATAAGAAATCCGGAAGAC+TGG - chr6.4:61078439-61078458 MS.gene059597:CDS 40.0%
TGCACAAACTACAGCAAAAC+CGG - chr6.4:61077271-61077290 MS.gene059597:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr6.4:61076412-61076431 MS.gene059597:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + chr6.4:61076295-61076314 None:intergenic 40.0%
TGGCAGAAGTGAGAAATTCA+AGG - chr6.4:61078544-61078563 MS.gene059597:CDS 40.0%
TTCCATATCAGCCACAGAAA+CGG - chr6.4:61074272-61074291 MS.gene059597:CDS 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr6.4:61076411-61076430 MS.gene059597:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG + chr6.4:61076296-61076315 None:intergenic 40.0%
TTTCCTTCATTTGTCGCCAA+TGG - chr6.4:61074198-61074217 MS.gene059597:CDS 40.0%
! AACTGTGAAACCGACTTTGT+TGG - chr6.4:61078524-61078543 MS.gene059597:CDS 40.0%
! AAGAATGAGGATTTGGTTCC+CGG - chr6.4:61074465-61074484 MS.gene059597:CDS 40.0%
! AGGAAGATGACGATGGATTT+GGG - chr6.4:61074913-61074932 MS.gene059597:intron 40.0%
! ATAAATGGAAGTACACCCTC+CGG + chr6.4:61076430-61076449 None:intergenic 40.0%
! ATAATGGGAAAAACGACACC+AGG + chr6.4:61077797-61077816 None:intergenic 40.0%
! CGATGGATTTGGGAAGATAA+TGG - chr6.4:61074923-61074942 MS.gene059597:intron 40.0%
! CGCAACAAACCCTTTTGTAT+TGG - chr6.4:61075085-61075104 MS.gene059597:intron 40.0%
! TCAATTACATCTGCCGATTG+AGG + chr6.4:61075963-61075982 None:intergenic 40.0%
! TCTTCAACTTGTGCTGATAC+AGG + chr6.4:61076047-61076066 None:intergenic 40.0%
! TTACTTTGGTTCAGTCTCCT+TGG + chr6.4:61077336-61077355 None:intergenic 40.0%
!! CAAGGAGTTCTTTAAGACAC+GGG - chr6.4:61074154-61074173 MS.gene059597:CDS 40.0%
!! CACGAAATTTGTTGTAGGTC+AGG - chr6.4:61074803-61074822 MS.gene059597:intron 40.0%
!! GTTCTGAGGAAAAACTCCAT+TGG + chr6.4:61074217-61074236 None:intergenic 40.0%
!! TGTTGATTTCGGAGCTTTCA+CGG - chr6.4:61074536-61074555 MS.gene059597:CDS 40.0%
!! TTAAAGTGCGGCGTTTTGTT+CGG - chr6.4:61078849-61078868 MS.gene059597:CDS 40.0%
AAAGCCCTTGCTGAAACTGA+AGG - chr6.4:61078365-61078384 MS.gene059597:CDS 45.0%
AACAGCTCCTTCCTTCTTCA+TGG + chr6.4:61075024-61075043 None:intergenic 45.0%
ACTCCATTGGCGACAAATGA+AGG + chr6.4:61074204-61074223 None:intergenic 45.0%
AGAAATCCTTCCTCTCCTTC+AGG + chr6.4:61074882-61074901 None:intergenic 45.0%
AGAATTTGTAGCTGCAACCG+AGG - chr6.4:61075511-61075530 MS.gene059597:intron 45.0%
AGCACTTGTGAAGCAACTTC+GGG - chr6.4:61076653-61076672 MS.gene059597:intron 45.0%
AGCGACATTGACCATGAAGA+AGG - chr6.4:61075010-61075029 MS.gene059597:intron 45.0%
AGCTGTTGCAGAATTGGACA+AGG - chr6.4:61075037-61075056 MS.gene059597:intron 45.0%
AGGTGAATCTTGTACCTCCA+CGG + chr6.4:61074304-61074323 None:intergenic 45.0%
ATGCCCTGTCGGAAATTCTT+CGG - chr6.4:61074071-61074090 MS.gene059597:CDS 45.0%
CAACAAACGCACCAAATGGT+TGG + chr6.4:61074521-61074540 None:intergenic 45.0%
CAAGAACCTGGTGTTTCTTG+AGG + chr6.4:61075605-61075624 None:intergenic 45.0%
CAGCACTTGTGAAGCAACTT+CGG - chr6.4:61076652-61076671 MS.gene059597:intron 45.0%
CCAGAAACTTCATTGGCAAC+AGG + chr6.4:61074324-61074343 None:intergenic 45.0%
CCCATAATATCATGCCCTGT+CGG - chr6.4:61074060-61074079 MS.gene059597:CDS 45.0%
CCGACAGGGCATGATATTAT+GGG + chr6.4:61074063-61074082 None:intergenic 45.0%
CCTGTTGCCAATGAAGTTTC+TGG - chr6.4:61074321-61074340 MS.gene059597:CDS 45.0%
CTCACTTCTGCCAACAAAGT+CGG + chr6.4:61078537-61078556 None:intergenic 45.0%
CTTGTCAAATAGGCAACTCC+AGG + chr6.4:61074102-61074121 None:intergenic 45.0%
GAGCATATTCGCTTGTTCTG+AGG + chr6.4:61074231-61074250 None:intergenic 45.0%
GATCACCTTCAGTTTCAGCA+AGG + chr6.4:61078373-61078392 None:intergenic 45.0%
GCAAGCATACCTCAGGAAAA+AGG - chr6.4:61078403-61078422 MS.gene059597:CDS 45.0%
GGATTGTTGAAGGACGGATA+AGG - chr6.4:61077063-61077082 MS.gene059597:intron 45.0%
GGCATTACTGCTTCAGATGA+AGG - chr6.4:61076128-61076147 MS.gene059597:CDS 45.0%
GGGTTTGGAAAAGAAAAGCG+AGG - chr6.4:61077229-61077248 MS.gene059597:intron 45.0%
GGTAACTACTCCAGTGAAAG+AGG - chr6.4:61077292-61077311 MS.gene059597:intron 45.0%
GTACGGTGAAGAATATGACG+AGG - chr6.4:61074835-61074854 MS.gene059597:intron 45.0%
GTGAAGAATATGACGAGGAG+TGG - chr6.4:61074840-61074859 MS.gene059597:intron 45.0%
GTTCTTACATCCATGACAGC+AGG - chr6.4:61076823-61076842 MS.gene059597:CDS 45.0%
TAAGACACGGGTCATCAACT+CGG - chr6.4:61074166-61074185 MS.gene059597:CDS 45.0%
TACATCCATGACAGCAGGAT+CGG - chr6.4:61076828-61076847 MS.gene059597:CDS 45.0%
TACATTCACGATGCACGCAT+TGG - chr6.4:61078485-61078504 MS.gene059597:CDS 45.0%
TCACCGATCAGTACCACAAT+TGG + chr6.4:61077695-61077714 None:intergenic 45.0%
TCCCGAAACTATTGTGACGA+AGG - chr6.4:61078637-61078656 MS.gene059597:CDS 45.0%
TCCGACAGGGCATGATATTA+TGG + chr6.4:61074064-61074083 None:intergenic 45.0%
TCGAGGGAAGAATCTCAAAG+AGG - chr6.4:61078726-61078745 MS.gene059597:CDS 45.0%
TCGTCATCTTCCTCAGCTAA+TGG + chr6.4:61074906-61074925 None:intergenic 45.0%
TCTAAGGAGCTCTTGTGCTT+TGG + chr6.4:61076742-61076761 None:intergenic 45.0%
TCTTTCCTTGGACCCGATTT+CGG + chr6.4:61074774-61074793 None:intergenic 45.0%
TGAGAAATGCAACCCATTGC+TGG + chr6.4:61077908-61077927 None:intergenic 45.0%
TGGACAAGAAGTTACGGTGA+AGG - chr6.4:61074626-61074645 MS.gene059597:CDS 45.0%
TGTCAACGAAAGGCCAATTG+TGG - chr6.4:61077679-61077698 MS.gene059597:CDS 45.0%
TTAGCTGAGGAAGATGACGA+TGG - chr6.4:61074906-61074925 MS.gene059597:intron 45.0%
TTCCGTTTCTGTGGCTGATA+TGG + chr6.4:61074277-61074296 None:intergenic 45.0%
TTGTTCTTGCACCTCTTCAG+TGG + chr6.4:61076021-61076040 None:intergenic 45.0%
! AAGGACCTGTTTGAAACTCC+AGG + chr6.4:61077423-61077442 None:intergenic 45.0%
! AGAATGAGGATTTGGTTCCC+GGG - chr6.4:61074466-61074485 MS.gene059597:CDS 45.0%
! AGGTTTGTTCGGTTCAACCT+CGG - chr6.4:61077203-61077222 MS.gene059597:intron 45.0%
! CAACGTTGAAACTGACTCAC+CGG - chr6.4:61075382-61075401 MS.gene059597:intron 45.0%
! CGAGTTTTGCGTATCACAAG+AGG - chr6.4:61074984-61075003 MS.gene059597:intron 45.0%
! CTGACCTTGTTGTCAACGAA+AGG - chr6.4:61077669-61077688 MS.gene059597:CDS 45.0%
! GAGACAGATTTTGTCTCTCG+AGG - chr6.4:61076873-61076892 MS.gene059597:CDS 45.0%
! GAGGAAGATGACGATGGATT+TGG - chr6.4:61074912-61074931 MS.gene059597:intron 45.0%
! GTCTCAAGTGTTGTGTCTCT+TGG - chr6.4:61074606-61074625 MS.gene059597:CDS 45.0%
! TTCAGGAGAGGGAAGTTGAT+TGG + chr6.4:61075991-61076010 None:intergenic 45.0%
! TTGGCCTTTCGTTGACAACA+AGG + chr6.4:61077676-61077695 None:intergenic 45.0%
!! AGGCCAATTGTGGTACTGAT+CGG - chr6.4:61077689-61077708 MS.gene059597:CDS 45.0%
!! CGTTTTGTTCGGTTCACTCT+TGG - chr6.4:61078860-61078879 MS.gene059597:CDS 45.0%
!! TATAAATGGTGCCGCTGAGA+AGG - chr6.4:61075262-61075281 MS.gene059597:intron 45.0%
!! AAGATAAAATATATTATAAA+TGG + chr6.4:61076445-61076464 None:intergenic 5.0%
AAACACCGATCCTGCTGTCA+TGG + chr6.4:61076836-61076855 None:intergenic 50.0%
AAGCAACTTCGGGACGAAAC+AGG - chr6.4:61076663-61076682 MS.gene059597:intron 50.0%
AATGCAGAGAAATCCGGCTC+TGG - chr6.4:61074735-61074754 MS.gene059597:intron 50.0%
AGAGGCGGTTGCTGAAAGTT+TGG - chr6.4:61075289-61075308 MS.gene059597:intron 50.0%
AGGTGGGATTCTCCGAAATC+GGG - chr6.4:61074759-61074778 MS.gene059597:intron 50.0%
ATGCAGAGAAATCCGGCTCT+GGG - chr6.4:61074736-61074755 MS.gene059597:intron 50.0%
ATTCTCCGAAATCGGGTCCA+AGG - chr6.4:61074766-61074785 MS.gene059597:intron 50.0%
CACGGATACTTCCGTTTCTG+TGG + chr6.4:61074286-61074305 None:intergenic 50.0%
CCAAACGTTCAAGACCTGCA+AGG - chr6.4:61074421-61074440 MS.gene059597:CDS 50.0%
CCTAAGTCTGATGCCAACAC+TGG - chr6.4:61074387-61074406 MS.gene059597:CDS 50.0%
CCTTGCAGGTCTTGAACGTT+TGG + chr6.4:61074424-61074443 None:intergenic 50.0%
CGAAACAGGAGCTGGAATGA+TGG - chr6.4:61076677-61076696 MS.gene059597:intron 50.0%
CGAAGTTGCTTCACAAGTGC+TGG + chr6.4:61076654-61076673 None:intergenic 50.0%
CGATTCCTCGACAACTGTTG+TGG - chr6.4:61075211-61075230 MS.gene059597:intron 50.0%
CTGGCAGCTGAAGGAAGAAT+CGG - chr6.4:61078458-61078477 MS.gene059597:CDS 50.0%
CTTTCATCAGCCACGTCAAC+CGG + chr6.4:61075404-61075423 None:intergenic 50.0%
GACGCTGAAAGCAACCAAGA+AGG - chr6.4:61075233-61075252 MS.gene059597:intron 50.0%
GAGGTGGGATTCTCCGAAAT+CGG - chr6.4:61074758-61074777 MS.gene059597:intron 50.0%
GATAGTGATGCAGTTGAGCC+TGG - chr6.4:61075536-61075555 MS.gene059597:intron 50.0%
GATTCTGTAACAACAGGGCC+AGG + chr6.4:61075557-61075576 None:intergenic 50.0%
GATTTCGGAGCTTTCACGGA+CGG - chr6.4:61074540-61074559 MS.gene059597:CDS 50.0%
GGAAGGAGCTGTTGCAGAAT+TGG - chr6.4:61075031-61075050 MS.gene059597:intron 50.0%
GGCTTTCGTAGAACCAGTGT+TGG + chr6.4:61074403-61074422 None:intergenic 50.0%
GTGCAGGAAATCAGCAGTAG+TGG - chr6.4:61078280-61078299 MS.gene059597:CDS 50.0%
GTTGTAGGTCAGGAGTTGCA+GGG - chr6.4:61074813-61074832 MS.gene059597:intron 50.0%
TACGAGAAGAAACCGGTGCA+GGG - chr6.4:61078327-61078346 MS.gene059597:CDS 50.0%
TCACTTCCTGAAGGAGAGGA+AGG - chr6.4:61074873-61074892 MS.gene059597:intron 50.0%
TCTTCAGTGGCAGGACTTTC+AGG + chr6.4:61076008-61076027 None:intergenic 50.0%
TGAAAGTCCTGCCACTGAAG+AGG - chr6.4:61076007-61076026 MS.gene059597:CDS 50.0%
TGTTACTGAAGACGTTCCCG+AGG - chr6.4:61076965-61076984 MS.gene059597:CDS 50.0%
TGTTCTCGGGTTTCGAAGCA+AGG + chr6.4:61078691-61078710 None:intergenic 50.0%
TGTTGTAGGTCAGGAGTTGC+AGG - chr6.4:61074812-61074831 MS.gene059597:intron 50.0%
TTCAGTCTCCTTGGCTTCTG+CGG + chr6.4:61077327-61077346 None:intergenic 50.0%
! AAAAGGCGCAAGCATACCTC+AGG - chr6.4:61078396-61078415 MS.gene059597:CDS 50.0%
! AACTGACTCACCGGTTGAAG+TGG - chr6.4:61075433-61075452 MS.gene059597:intron 50.0%
! ATGAGAGGCCCTTTTTCCTG+AGG + chr6.4:61078415-61078434 None:intergenic 50.0%
! GAATGAGGATTTGGTTCCCG+GGG - chr6.4:61074467-61074486 MS.gene059597:CDS 50.0%
! GACAAGGCACTTGCACAAGT+GGG - chr6.4:61075053-61075072 MS.gene059597:intron 50.0%
! TCTTTTCCAAACCCTCTCCG+AGG + chr6.4:61077223-61077242 None:intergenic 50.0%
! TGATGCTAGTTTGTCCCCTG+AGG - chr6.4:61075816-61075835 MS.gene059597:CDS 50.0%
!! AGAAACGGAAGTATCCGTGG+AGG - chr6.4:61074287-61074306 MS.gene059597:CDS 50.0%
!! CACAGAAACGGAAGTATCCG+TGG - chr6.4:61074284-61074303 MS.gene059597:CDS 50.0%
!! CCAGTGTTGGCATCAGACTT+AGG + chr6.4:61074390-61074409 None:intergenic 50.0%
!! GGCATTTCGCTTTTCCTTGC+AGG + chr6.4:61074438-61074457 None:intergenic 50.0%
!! TGACAGCAGGATCGGTGTTT+TGG - chr6.4:61076836-61076855 MS.gene059597:CDS 50.0%
ACAGTCCATCATCCCTGCAC+CGG + chr6.4:61078342-61078361 None:intergenic 55.0%
AGAAACCGGTGCAGGGATGA+TGG - chr6.4:61078334-61078353 MS.gene059597:CDS 55.0%
AGCGTCCACAACAGTTGTCG+AGG + chr6.4:61075219-61075238 None:intergenic 55.0%
AGGTCAGGAGTTGCAGGGTA+CGG - chr6.4:61074818-61074837 MS.gene059597:intron 55.0%
AGTAGTGGTCTCAGCCGCTT+TGG - chr6.4:61078295-61078314 MS.gene059597:CDS 55.0%
AGTGGCAGGACTTTCAGGAG+AGG + chr6.4:61076003-61076022 None:intergenic 55.0%
ATGTCTGTTCCGCTGCCCTT+TGG - chr6.4:61076610-61076629 MS.gene059597:intron 55.0%
CCAGCTCCTCAAGAAACACC+AGG - chr6.4:61075596-61075615 MS.gene059597:intron 55.0%
CCTGGTGTTTCTTGAGGAGC+TGG + chr6.4:61075599-61075618 None:intergenic 55.0%
CGCCTCTGTTTCCTTCTCAG+CGG + chr6.4:61075276-61075295 None:intergenic 55.0%
CGCTGAGAAGGAAACAGAGG+CGG - chr6.4:61075274-61075293 MS.gene059597:intron 55.0%
CTACGAGAAGAAACCGGTGC+AGG - chr6.4:61078326-61078345 MS.gene059597:CDS 55.0%
GCAACTGCCGAAGGAAGGAT+AGG - chr6.4:61076801-61076820 MS.gene059597:intron 55.0%
GTGGCAGGACTTTCAGGAGA+GGG + chr6.4:61076002-61076021 None:intergenic 55.0%
GTTCAACCTCGGAGAGGGTT+TGG - chr6.4:61077214-61077233 MS.gene059597:intron 55.0%
GTTCGGTTCAACCTCGGAGA+GGG - chr6.4:61077209-61077228 MS.gene059597:intron 55.0%
TCCTTCAGCTGCCAGTCTTC+CGG + chr6.4:61078453-61078472 None:intergenic 55.0%
TCTTGCACCTCTTCAGTGGC+AGG + chr6.4:61076017-61076036 None:intergenic 55.0%
TGCCGCTGAGAAGGAAACAG+AGG - chr6.4:61075271-61075290 MS.gene059597:intron 55.0%
TGCTGCAATCCAAAGGGCAG+CGG + chr6.4:61076622-61076641 None:intergenic 55.0%
TGTTCGGTTCAACCTCGGAG+AGG - chr6.4:61077208-61077227 MS.gene059597:intron 55.0%
TTTCCCCGTAAAAGCTGCCC+CGG + chr6.4:61074487-61074506 None:intergenic 55.0%
! AACTGACTCACCGGTTGACG+TGG - chr6.4:61075391-61075410 MS.gene059597:intron 55.0%
! GCAAGTTGCTGCTTGTCCAC+AGG - chr6.4:61078589-61078608 MS.gene059597:CDS 55.0%
! GGACAAGGCACTTGCACAAG+TGG - chr6.4:61075052-61075071 MS.gene059597:intron 55.0%
AGAATCCCACCTCCCAGAGC+CGG + chr6.4:61074751-61074770 None:intergenic 60.0%
CCAGAGCAACTGCCGAAGGA+AGG - chr6.4:61076796-61076815 MS.gene059597:intron 60.0%
CCTTCCTTCGGCAGTTGCTC+TGG + chr6.4:61076799-61076818 None:intergenic 60.0%
CTTCGGGACGAAACAGGAGC+TGG - chr6.4:61076669-61076688 MS.gene059597:intron 60.0%
GCAGCAGGCTCCTCTTTCAC+TGG + chr6.4:61077305-61077324 None:intergenic 60.0%
TCCGGAAGACTGGCAGCTGA+AGG - chr6.4:61078449-61078468 MS.gene059597:CDS 60.0%
TTCCCCGTAAAAGCTGCCCC+GGG + chr6.4:61074486-61074505 None:intergenic 60.0%
! GGTTCCCGGGGCAGCTTTTA+CGG - chr6.4:61074479-61074498 MS.gene059597:CDS 60.0%
! GTTCCCGGGGCAGCTTTTAC+GGG - chr6.4:61074480-61074499 MS.gene059597:CDS 60.0%
! TTCCCGGGGCAGCTTTTACG+GGG - chr6.4:61074481-61074500 MS.gene059597:CDS 60.0%
!! AGAAATCCGGCTCTGGGAGG+TGG - chr6.4:61074742-61074761 MS.gene059597:intron 60.0%
!! CAGAGAAATCCGGCTCTGGG+AGG - chr6.4:61074739-61074758 MS.gene059597:intron 60.0%
!! GAAATCCGGCTCTGGGAGGT+GGG - chr6.4:61074743-61074762 MS.gene059597:intron 60.0%
GCAGCCAGAGCAACTGCCGA+AGG - chr6.4:61076792-61076811 MS.gene059597:intron 65.0%
TCCTTGGCTTCTGCGGCAGC+AGG + chr6.4:61077320-61077339 None:intergenic 65.0%
GCCTGCTGCCGCAGAAGCCA+AGG - chr6.4:61077316-61077335 MS.gene059597:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 61074054 61078919 61074054 ID=MS.gene059597
chr6.4 mRNA 61074054 61078919 61074054 ID=MS.gene059597.t1;Parent=MS.gene059597
chr6.4 exon 61077356 61078919 61077356 ID=MS.gene059597.t1.exon1;Parent=MS.gene059597.t1
chr6.4 CDS 61077356 61078919 61077356 ID=cds.MS.gene059597.t1;Parent=MS.gene059597.t1
chr6.4 exon 61077120 61077194 61077120 ID=MS.gene059597.t1.exon2;Parent=MS.gene059597.t1
chr6.4 CDS 61077120 61077194 61077120 ID=cds.MS.gene059597.t1;Parent=MS.gene059597.t1
chr6.4 exon 61076812 61077000 61076812 ID=MS.gene059597.t1.exon3;Parent=MS.gene059597.t1
chr6.4 CDS 61076812 61077000 61076812 ID=cds.MS.gene059597.t1;Parent=MS.gene059597.t1
chr6.4 exon 61075622 61076333 61075622 ID=MS.gene059597.t1.exon4;Parent=MS.gene059597.t1
chr6.4 CDS 61075622 61076333 61075622 ID=cds.MS.gene059597.t1;Parent=MS.gene059597.t1
chr6.4 exon 61074054 61074687 61074054 ID=MS.gene059597.t1.exon5;Parent=MS.gene059597.t1
chr6.4 CDS 61074054 61074687 61074054 ID=cds.MS.gene059597.t1;Parent=MS.gene059597.t1
Gene Sequence

>MS.gene059597

ATGAATCCCATAATATCATGCCCTGTCGGAAATTCTTCGGTTATTCCTGGAGTTGCCTATTTGACAAGAAAGAATAACTCGTTAACCAGACTCAACTTTTCAAGGAGTTCTTTAAGACACGGGTCATCAACTCGGAGATTTCTCTTTCCTTCATTTGTCGCCAATGGAGTTTTTCCTCAGAACAAGCGAATATGCTCTTACCGGAAAAATTCTCGAACTTCCATATCAGCCACAGAAACGGAAGTATCCGTGGAGGTACAAGATTCACCTGTTGCCAATGAAGTTTCTGGTGAATCTCCTTCAAATGAAGTTGGAACAAGTGAAGACTCATCTCCTAAGTCTGATGCCAACACTGGTTCTACGAAAGCCAAACGTTCAAGACCTGCAAGGAAAAGCGAAATGCCTCCTGTAAAGAATGAGGATTTGGTTCCCGGGGCAGCTTTTACGGGGAAAGTAAAATCTATCCAACCATTTGGTGCGTTTGTTGATTTCGGAGCTTTCACGGACGGACTTGTTCATATTTCAATGTTGAGTGATAGCTTTGTAAAGGATGTCTCAAGTGTTGTGTCTCTTGGACAAGAAGTTACGGTGAAGGTGATTGAAGTGAATGCTGAAACTAAGCGTATATCTCTATCTATGCGTGAAAACACTGATACTGGTAAACGTAATGATGCATCGAACAATGCAGAGAAATCCGGCTCTGGGAGGTGGGATTCTCCGAAATCGGGTCCAAGGAAAGATAAGAAAAACACGAAATTTGTTGTAGGTCAGGAGTTGCAGGGTACGGTGAAGAATATGACGAGGAGTGGTACTTTTATATCACTTCCTGAAGGAGAGGAAGGATTTCTACCATTAGCTGAGGAAGATGACGATGGATTTGGGAAGATAATGGGAAAATCTTCTTTGGAGATTGGTCGAGAAGTTAGCGTACGAGTTTTGCGTATCACAAGAGGACAAGCGACATTGACCATGAAGAAGGAAGGAGCTGTTGCAGAATTGGACAAGGCACTTGCACAAGTGGGTGATGACGTCGCAACAAACCCTTTTGTATTGGCTTTTCGTAGAAATAAGGATATTGCTAAATTTTTGGATCAGAGGGAGAAACTTCAGAGTGAAGTTAAATCATCAACTACAGAAACTGTGGAAGATTCACTGGTCGATTCCTCGACAACTGTTGTGGACGCTGAAAGCAACCAAGAAGGAAGTATTATAAATGGTGCCGCTGAGAAGGAAACAGAGGCGGTTGCTGAAAGTTTGGCTTCAGAAGAAGAATTAGATGCTGTAAATTCAATTATCGAGGAAGCTATTCAGACAGATATTGCAACAAGCAACGTTGAAACTGACTCACCGGTTGACGTGGCTGATGAAAGTTTAATAGAAACTGACTCACCGGTTGAAGTGGCTGATCAAATTGTTGCGGAAGATGAAAAACAATCAGAAACTGACAATGGAAAGGAAGAATTTGTAGCTGCAACCGAGGAAGATAGTGATGCAGTTGAGCCTGGCCCTGTTGTTACAGAATCAGAGATTACGTCAAGTGCACCAGCTCCTCAAGAAACACCAGGTTCTTGTTTTCTATCTCATTCGTATTTATATATGGAAATATTGGTCGCATGTCACTATCCGAAATTATAGCTAAAATCAAACATATTTTGTGTAGTAAGATGCATGTTTAAGACTTTCTTATTAACTTAACTAATAATATTTCCTTTGCATTTCAAATAGATGACAATGTTGCAGCTGTTTCAGAGAACAATGAGATTGATGCTAGTTTGTCCCCTGAGGAAAGCTTGAATAAAGGTTATGAATGAAATTGATAGAAAGTTTTTTGAGCTTGTTTGAACTTTATATTTAAATCATATATTACACCCCTTTCTTTTCCTATAGTATCCTATTAACTTTGAATCCTCAATCGGCAGATGTAATTGAAGAAACCAATCAACTTCCCTCTCCTGAAAGTCCTGCCACTGAAGAGGTGCAAGAACAAACACCTGTATCAGCACAAGTTGAAGATGAAGCAGTTGCAATTGCATCGGAGACAAACAGCAACTTATCTAACTCTAATGGACAAACTGGCATTACTGCTTCAGATGAAGGATCGAGTAAAGGTTTCCATTTCATCTTATTTGCTTCATATTTCAACTCTCATTTTTCTACATCAAACACACGTACATATATTTGAATTTATACATGTATTTCAGTTTTTACATGCAAAAGAGAAGAAAAAAAGAATATACACCCTCCGGTCACTAATATAAGCAAAAAACTACATTTTAGGTTCATTCATTTAATGATGTATGTGGTCTATAATAAAGACTATGTGCATCATTAAATGAATGAATCTAAAATGTAGATTTTTGCTTATAATAGTGACCGGAGGGTGTACTTCCATTTATAATATATTTTATCTTGTTATAAAAATAGCTTATACATAAGCATTTATATAATAAGCGCTTATCTTATAAGCTTAAATTAGGTTGTTTATCCAAACAAGGTCATAGTTTTCTAACCTGTTCACCTATCTTTGAATTCTTAGATAAGACTTCTAATTGTTAAATGTCTGTTCCGCTGCCCTTTGGATTGCAGCAACTATATCACCAGCACTTGTGAAGCAACTTCGGGACGAAACAGGAGCTGGAATGATGGACTGCAAAAATGCTCTTTCTGAAAGTGAAGGTGACATTACCAAAGCACAAGAGCTCCTTAGAAAAAAAGGCTTAGCGAGTGCAGACAAGAAAGCAGCCAGAGCAACTGCCGAAGGAAGGATAGGTTCTTACATCCATGACAGCAGGATCGGTGTTTTGGTAGAAGTAAACTGCGAGACAGATTTTGTCTCTCGAGGTGAAATTTTCAAAGAGCTTGTCGATGATATAGCAATGCAAGTGGCTGCGTGCCCCCAAGTAGAGTATGTTGTTACTGAAGACGTTCCCGAGGAATTCGTGAAGAAAGAAACGGAGATAGAAATGCAAAAAGAAGATCTTGCGTCAAAACCGGAGCAAATTAGATCAAGGATTGTTGAAGGACGGATAAGGAAAAGACTTGAGGATTTAGCATTGCTTGAGCAGCCCTACATCAAGAATGATAAAGTGACAGTAAAGGATATGGTTAAGCAGACAATTGCAACTATTGGAGAAAATATGAAAGTTACAAGGTTTGTTCGGTTCAACCTCGGAGAGGGTTTGGAAAAGAAAAGCGAGGATTTTGCTGCTGAAGTCGCTGCACAAACTACAGCAAAACCGGTAACTACTCCAGTGAAAGAGGAGCCTGCTGCCGCAGAAGCCAAGGAGACTGAACCAAAGTAAGTGTGGTTCAATGAATTTCTACTTGTTATTGAGTTATTTAATTATGAAATTTTGGTAATTAGTACCTGGAGTTTCAAACAGGTCCTTGACTTTTTTTTTCCATGTCAAACTAGTTATTTCTTCTCCGTGTTAAGTTAGTTAGTCCTCTTTGTTTAAAAACATCAACAATGTTGGCCCAAACTTCATTTTTGTTTTTAAAAGGTACATTACATATTCAATTAATCAAGGTTACATCTAAATTACATCACAATGACTGTTACAATATCTAATCCATTAAAATTGACATGATATATTTTTGTTTTTATCTAAATTTCTGACCTTGTTGTCAACGAAAGGCCAATTGTGGTACTGATCGGTGAAACATTCTTTATAGAGATAAAAGACTAATTTGACACAAAAAACGGATAAAGGATGGCTTTTAAATTAAGTTAAAGGAACCCTGGTGTCGTTTTTCCCATTATGAAATTTCCATAATTATGCCAAAGTAAACACTTTTGGTGATTGCATTAACTTTATGTACTAATTGGCTCAGCTGTGTGCTAAAATATTCCAGCAATGGGTTGCATTTCTCATTTTCCTACTCTTTTTACAAATGATGTGAAGAACTGACTGACTTTTGAAATCTACAAACTGTACAAGGGTGCTAAATTTTCCTGAATATTTTAACCCTAACCTTCTCGAGTTATTCTTGCTATAGACAAAACTTAACCTAAGCTGTGACTGTATGATTTGTGAGCTGAAGTCTATGAAAGCACTGACACAAATACGGACATTTCACATGACACTAACACTGACATGCCGACACCAGTAGTAAGTTTACAAAATGCAACAACTGAATGTAACATGTGTACGTGCTAGTTGTACCCAAACTTTGAGAAAAAAATGGATGTGTTTGACGCAAATATTAAATTGTTCAATGTTGTGGTGCAGGAAATCAGCAGTAGTGGTCTCAGCCGCTTTGGTTAAGCAACTACGAGAAGAAACCGGTGCAGGGATGATGGACTGTAAGAAAGCCCTTGCTGAAACTGAAGGTGATCTTGAAAAGGCGCAAGCATACCTCAGGAAAAAGGGCCTCTCATCCGCTGATAAGAAATCCGGAAGACTGGCAGCTGAAGGAAGAATCGGTACATACATTCACGATGCACGCATTGGTGTTCTAATTGAAGTGAACTGTGAAACCGACTTTGTTGGCAGAAGTGAGAAATTCAAGGAGTTGGTTGATGATCTTGCAATGCAAGTTGCTGCTTGTCCACAGGTTCAGTTTGTATCTATTGAAGATATTCCCGAAACTATTGTGACGAAGGAAAAAGAACTTGAGATGCAAAGAGAAGACCTTGCTTCGAAACCCGAGAACATTAGAGAGAAAATTGTCGAGGGAAGAATCTCAAAGAGGTTAGGAGAGCTTGCTCTTCTAGAGCAGCCTTTTATTAAGGATGACAGTGTTATAGTGAAAGACTTGGTTAGGCAAAGTATAGCTGCTATTGGAGAGAATATTAAAGTGCGGCGTTTTGTTCGGTTCACTCTTGGAGAAACAGTTCAAAAAGAAACAGCTGTACCAGCATAG

Protein sequence

>MS.gene059597.t1

MNPIISCPVGNSSVIPGVAYLTRKNNSLTRLNFSRSSLRHGSSTRRFLFPSFVANGVFPQNKRICSYRKNSRTSISATETEVSVEVQDSPVANEVSGESPSNEVGTSEDSSPKSDANTGSTKAKRSRPARKSEMPPVKNEDLVPGAAFTGKVKSIQPFGAFVDFGAFTDGLVHISMLSDSFVKDVSSVVSLGQEVTVKVIEVNAETKRISLSMRENTDTGKRNDASNNAEKSGSGRWDSPKSGPRKDKKNTKFVVGQELQGTVKNMTRSGTFISLPEGEEGFLPLAEEDDDGFGKIMGKSSLEIGREVSVRVLRITRGQATLTMKKEGAVAELDKALAQVGDDVATNPFVLAFRRNKDIAKFLDQREKLQSEVKSSTTETVEDSLVDSSTTVVDAESNQEGSIINGAAEKETEAVAESLASEEELDAVNSIIEEAIQTDIATSNVETDSPVDVADESLIETDSPVEVADQIVAEDEKQSETDNGKEEFVAATEEDSDAVEPGPVVTESEITSSAPAPQETPDDNVAAVSENNEIDASLSPEESLNKDVIEETNQLPSPESPATEEVQEQTPVSAQVEDEAVAIASETNSNLSNSNGQTGITASDEGSSKATISPALVKQLRDETGAGMMDCKNALSESEGDITKAQELLRKKGLASADKKAARATAEGRIGSYIHDSRIGVLVEVNCETDFVSRGEIFKELVDDIAMQVAACPQVEYVVTEDVPEEFVKKETEIEMQKEDLASKPEQIRSRIVEGRIRKRLEDLALLEQPYIKNDKVTVKDMVKQTIATIGENMKVTRFVRFNLGEGLEKKSEDFAAEVAAQTTAKPVTTPVKEEPAAAEAKETEPKKSAVVVSAALVKQLREETGAGMMDCKKALAETEGDLEKAQAYLRKKGLSSADKKSGRLAAEGRIGTYIHDARIGVLIEVNCETDFVGRSEKFKELVDDLAMQVAACPQVQFVSIEDIPETIVTKEKELEMQREDLASKPENIREKIVEGRISKRLGELALLEQPFIKDDSVIVKDLVRQSIAAIGENIKVRRFVRFTLGETVQKETAVPA