Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41568.t1 | XP_013460383.1 | 93.5 | 987 | 61 | 2 | 1 | 987 | 1 | 984 | 0.00E+00 | 1693.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41568.t1 | O24303 | 68.8 | 942 | 290 | 2 | 49 | 987 | 56 | 996 | 0.0e+00 | 1259.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41568.t1 | A0A072UYD0 | 93.5 | 987 | 61 | 2 | 1 | 987 | 1 | 984 | 0.0e+00 | 1693.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061100 | MS.gene41568 | 0.818812 | 1.61E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41568.t1 | MTR_3g466170 | 95.137 | 987 | 45 | 2 | 1 | 987 | 1 | 984 | 0.0 | 1810 |
| MS.gene41568.t1 | MTR_5g074690 | 72.490 | 996 | 262 | 6 | 1 | 987 | 1 | 993 | 0.0 | 1380 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41568.t1 | AT1G06950 | 64.735 | 1001 | 338 | 3 | 2 | 987 | 16 | 1016 | 0.0 | 1298 |
Find 213 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAGGGGCGGTTGCTTTC+GGG | 0.068237 | 3.1:+50425920 | MS.gene41568:CDS |
| GTTGGAGGGGCGGTTGCTTT+CGG | 0.202653 | 3.1:+50425919 | MS.gene41568:CDS |
| CGGAGGAAGGGAGGAGGAGG+AGG | 0.247804 | 3.1:-50425752 | None:intergenic |
| TTCGATTCCGGTGAGGTCTT+TGG | 0.248463 | 3.1:-50425776 | None:intergenic |
| TACTTGCTTTATTGCCTAAC+TGG | 0.270970 | 3.1:+50431399 | MS.gene41568:CDS |
| AGATCTGTCCTATCTCTTTC+TGG | 0.277972 | 3.1:-50431366 | None:intergenic |
| ATCAAATTTAAGCATGCTTT+AGG | 0.294570 | 3.1:+50426860 | MS.gene41568:CDS |
| AGGAAGGGAGGAGGAGGAGG+AGG | 0.294610 | 3.1:-50425749 | None:intergenic |
| TTCAATGGCAGCTGCCATTT+TGG | 0.310604 | 3.1:-50431703 | None:intergenic |
| CGAAGTGTAATAAGTTGTTC+AGG | 0.310988 | 3.1:-50427941 | None:intergenic |
| GATATCTGTGGCCGTTTGTT+TGG | 0.312975 | 3.1:+50430271 | MS.gene41568:CDS |
| TCACCAACTGCTGAAGCTTT+TGG | 0.316117 | 3.1:-50430153 | None:intergenic |
| TTTCATCTAGGCTCGAAATT+AGG | 0.320829 | 3.1:+50425877 | MS.gene41568:CDS |
| TCGATTCCGGTGAGGTCTTT+GGG | 0.327031 | 3.1:-50425775 | None:intergenic |
| TGGATTACTCTTCATGAATA+TGG | 0.331472 | 3.1:-50432235 | None:intergenic |
| GTCATGGAAGCGATTGAATC+AGG | 0.333545 | 3.1:+50430850 | MS.gene41568:CDS |
| ACCTTCTGAGCATATTCTTC+GGG | 0.338052 | 3.1:-50431660 | None:intergenic |
| GGGCGGAGGAAGGGAGGAGG+AGG | 0.359115 | 3.1:-50425755 | None:intergenic |
| TGGTCGTATGGAAGATAATA+AGG | 0.369609 | 3.1:+50428839 | MS.gene41568:CDS |
| GTTATCAAACTCACTCATTC+AGG | 0.371287 | 3.1:+50431971 | MS.gene41568:CDS |
| GGAGCAACTAACTAATATTC+AGG | 0.373814 | 3.1:+50431623 | MS.gene41568:CDS |
| GAGTATAACTACTACCAAAA+TGG | 0.375611 | 3.1:+50431689 | MS.gene41568:CDS |
| TCAGGCTAAGGCTTGAAGTT+GGG | 0.385968 | 3.1:+50427047 | MS.gene41568:CDS |
| CTTCAGCAGTTGGTGACTAA+TGG | 0.387778 | 3.1:+50430160 | MS.gene41568:CDS |
| ATGGATATGATGCTGAAATT+AGG | 0.394460 | 3.1:+50430878 | MS.gene41568:CDS |
| GCGGTTGCTTTCGGGGTGGC+TGG | 0.395114 | 3.1:+50425928 | MS.gene41568:CDS |
| CATTCCTCTTGTTAGTGATC+CGG | 0.400540 | 3.1:-50431449 | None:intergenic |
| TACCTTCTGAGCATATTCTT+CGG | 0.404744 | 3.1:-50431661 | None:intergenic |
| AATCAGCTTGGTGGGATTCT+CGG | 0.405722 | 3.1:+50431492 | MS.gene41568:CDS |
| AGCATATGTTACAAATGCTT+TGG | 0.407094 | 3.1:+50428812 | MS.gene41568:CDS |
| ATGTGACGAAGATTCCATTT+GGG | 0.407162 | 3.1:+50431424 | MS.gene41568:CDS |
| GTGGATGAAGAGGGTGGTAA+AGG | 0.407933 | 3.1:-50425685 | None:intergenic |
| CATCATCTTTCCTTCTACCT+TGG | 0.409135 | 3.1:+50427250 | MS.gene41568:CDS |
| GACTCGCTTGCAGCATCTGT+TGG | 0.411289 | 3.1:+50432272 | MS.gene41568:CDS |
| GAGTTGGTGAATGACATTAA+AGG | 0.411330 | 3.1:+50431174 | MS.gene41568:CDS |
| GTCTTTGGGCGGAGGAAGGG+AGG | 0.412772 | 3.1:-50425761 | None:intergenic |
| TGCCATGGCGCCGCAAGTTG+CGG | 0.413823 | 3.1:+50425975 | MS.gene41568:CDS |
| AGTTGGTGAATGACATTAAA+GGG | 0.416119 | 3.1:+50431175 | MS.gene41568:CDS |
| GCTTGCTGAAAACTTGTTCA+AGG | 0.419029 | 3.1:+50428136 | MS.gene41568:intron |
| GTGTCGTCTGTGCTTCCTCC+TGG | 0.420822 | 3.1:+50426800 | MS.gene41568:CDS |
| AGCTTACCCAGAAAAGAAAC+TGG | 0.423264 | 3.1:-50428640 | None:intergenic |
| ATACCTGTGAATCGGTGAAC+TGG | 0.425469 | 3.1:-50427284 | None:intergenic |
| GGTGGTAAAGGGAAGGGTAA+TGG | 0.426939 | 3.1:-50425673 | None:intergenic |
| TTGTGTCACTGCGGTTTCAA+TGG | 0.429994 | 3.1:-50431718 | None:intergenic |
| ATATGTATATCAGCTGCATC+TGG | 0.430239 | 3.1:-50426893 | None:intergenic |
| ATGACCTTCCAGAAAGAGAT+AGG | 0.435374 | 3.1:+50431358 | MS.gene41568:CDS |
| TGGAGGGGCGGTTGCTTTCG+GGG | 0.436954 | 3.1:+50425921 | MS.gene41568:CDS |
| ACATCCGCCGTTGTTATTGC+AGG | 0.438981 | 3.1:+50425838 | MS.gene41568:CDS |
| GATGATAACTTTCAACACTT+TGG | 0.440411 | 3.1:+50431143 | MS.gene41568:CDS |
| TGCTTTGGCCGGTGGTCGTA+TGG | 0.440657 | 3.1:+50428827 | MS.gene41568:CDS |
| GCAGCTGCTCTTCGCGAGTT+GGG | 0.443913 | 3.1:+50432312 | MS.gene41568:CDS |
| TGAGGTCTTTGGGCGGAGGA+AGG | 0.444151 | 3.1:-50425765 | None:intergenic |
| TAAAGATCAGCAAGCTCCTC+TGG | 0.449506 | 3.1:-50432210 | None:intergenic |
| GATCTCTTTGCTCGAGGTGT+TGG | 0.449966 | 3.1:+50428616 | MS.gene41568:CDS |
| TTCTGGTGGTGAATTAGAAA+TGG | 0.450531 | 3.1:+50429801 | MS.gene41568:CDS |
| CTCTTCGCGAGTTGGGATAT+AGG | 0.450801 | 3.1:+50432319 | MS.gene41568:CDS |
| CGAAGATTCCATTTGGGGCC+CGG | 0.451240 | 3.1:+50431430 | MS.gene41568:CDS |
| TTTGGGCGGAGGAAGGGAGG+AGG | 0.451988 | 3.1:-50425758 | None:intergenic |
| TTCTTCACTCTATGACATGC+TGG | 0.452273 | 3.1:+50432143 | MS.gene41568:CDS |
| GATGTGACGAAGATTCCATT+TGG | 0.454193 | 3.1:+50431423 | MS.gene41568:CDS |
| TTCTTCTAAATCAGCTTGGT+GGG | 0.456799 | 3.1:+50431484 | MS.gene41568:CDS |
| AGCAGCTGCTCTTCGCGAGT+TGG | 0.459705 | 3.1:+50432311 | MS.gene41568:CDS |
| TCTTTCTATCACCATCATAC+TGG | 0.460644 | 3.1:-50428764 | None:intergenic |
| ACGAGGTGCTGAAAATTCTA+AGG | 0.462014 | 3.1:+50431098 | MS.gene41568:CDS |
| AATAGACAAAGCAATTTCCT+TGG | 0.463678 | 3.1:-50430938 | None:intergenic |
| TTTGAGTGGTAAAGAAATAG+TGG | 0.465745 | 3.1:+50431515 | MS.gene41568:CDS |
| AAATACGCTTCCAAGGTAGA+AGG | 0.467254 | 3.1:-50427260 | None:intergenic |
| GAGGAGGAGGATGAAGAGCG+AGG | 0.467637 | 3.1:-50425736 | None:intergenic |
| ACTCGCTTGCAGCATCTGTT+GGG | 0.469030 | 3.1:+50432273 | MS.gene41568:CDS |
| CAGGCTAAGGCTTGAAGTTG+GGG | 0.469171 | 3.1:+50427048 | MS.gene41568:CDS |
| TGCTTTGTCTATTGCAAGCA+AGG | 0.471233 | 3.1:+50430948 | MS.gene41568:CDS |
| TCATCCTTTGTTGTTGAAGA+AGG | 0.475258 | 3.1:+50426032 | MS.gene41568:CDS |
| TCAGCATCGTCTATCTGATC+AGG | 0.475765 | 3.1:+50427976 | MS.gene41568:CDS |
| ATTCCTCTTGTTAGTGATCC+GGG | 0.478388 | 3.1:-50431448 | None:intergenic |
| AGGGGCGGTTGCTTTCGGGG+TGG | 0.478679 | 3.1:+50425924 | MS.gene41568:CDS |
| TGCGTATGCTCTTAATGCCA+TGG | 0.479693 | 3.1:+50425960 | MS.gene41568:CDS |
| TTCAGGCTAAGGCTTGAAGT+TGG | 0.479746 | 3.1:+50427046 | MS.gene41568:CDS |
| CTCGCGAAGAGCAGCTGCTG+TGG | 0.480205 | 3.1:-50432307 | None:intergenic |
| GCGATTGAATCAGGGGTTGA+TGG | 0.481320 | 3.1:+50430859 | MS.gene41568:CDS |
| TTCAAGGTGACGAGGCTGAT+AGG | 0.481412 | 3.1:+50426834 | MS.gene41568:CDS |
| GAAGGTGTGAGAGTTGATGA+AGG | 0.481901 | 3.1:-50425640 | None:intergenic |
| GGTAATGGAATGAGAGAAGA+AGG | 0.482318 | 3.1:-50425658 | None:intergenic |
| GAGGTCTTTGGGCGGAGGAA+GGG | 0.484660 | 3.1:-50425764 | None:intergenic |
| AGCCGCAACTTGCGGCGCCA+TGG | 0.486713 | 3.1:-50425977 | None:intergenic |
| TGCAGCTGATATACATATAG+AGG | 0.488405 | 3.1:+50426898 | MS.gene41568:CDS |
| AGAAGAGCTTGATAAGATCT+TGG | 0.488530 | 3.1:+50428549 | MS.gene41568:CDS |
| ATATTGATCGAATCGCCAAT+AGG | 0.488720 | 3.1:+50426058 | MS.gene41568:CDS |
| TTAGTGATCCGGGCCCCAAA+TGG | 0.488801 | 3.1:-50431438 | None:intergenic |
| TGGATGAAGAGGGTGGTAAA+GGG | 0.490178 | 3.1:-50425684 | None:intergenic |
| CCGCCAAAAGCTTCAGCAGT+TGG | 0.490455 | 3.1:+50430150 | MS.gene41568:CDS |
| CCTGGCGGTGAGGAACTTCA+AGG | 0.493561 | 3.1:+50426818 | MS.gene41568:CDS |
| TTGTTAATGCCTAGGTTGGT+AGG | 0.494383 | 3.1:+50427017 | MS.gene41568:intron |
| TTCACTCACAGCCACTATCA+TGG | 0.494527 | 3.1:+50432181 | MS.gene41568:CDS |
| GAGTTTGAAACGGTGTCGTT+TGG | 0.496433 | 3.1:-50425707 | None:intergenic |
| GAAGTGTAATAAGTTGTTCA+GGG | 0.497500 | 3.1:-50427940 | None:intergenic |
| TTTCCAGTTCACCGATTCAC+AGG | 0.499129 | 3.1:+50427281 | MS.gene41568:CDS |
| ATTGCAGGCGCAGTAGCGGC+GGG | 0.504634 | 3.1:+50425853 | MS.gene41568:CDS |
| AGGAGGAGGATGAAGAGCGA+GGG | 0.507256 | 3.1:-50425735 | None:intergenic |
| CTGTGGCCGTTTGTTTGGAA+AGG | 0.512306 | 3.1:+50430276 | MS.gene41568:CDS |
| GTTGCTTTCGGGGTGGCTGG+TGG | 0.512697 | 3.1:+50425931 | MS.gene41568:CDS |
| TACACAATTACCTCTTCCAA+TGG | 0.513266 | 3.1:-50427639 | None:intergenic |
| CCGGTGAGGTCTTTGGGCGG+AGG | 0.515579 | 3.1:-50425769 | None:intergenic |
| TCTGGCAATTCCCATGATAG+TGG | 0.516429 | 3.1:-50432192 | None:intergenic |
| AACTTACACAGCTCTTGTGC+GGG | 0.519404 | 3.1:-50428216 | None:intergenic |
| TATTGCAGGCGCAGTAGCGG+CGG | 0.519683 | 3.1:+50425852 | MS.gene41568:CDS |
| ATTGCACTTTGATCCACTAA+AGG | 0.521013 | 3.1:+50429864 | MS.gene41568:CDS |
| AGAGTAATTTCCGTCTGACC+AGG | 0.522856 | 3.1:-50431330 | None:intergenic |
| GTTCTTCTAAATCAGCTTGG+TGG | 0.523316 | 3.1:+50431483 | MS.gene41568:CDS |
| AGAGTACCTTTCCAAACAAA+CGG | 0.525241 | 3.1:-50430282 | None:intergenic |
| TCTTCCAATGGATTTCAGCT+TGG | 0.525527 | 3.1:-50427627 | None:intergenic |
| TATGTTACAAATGCTTTGGC+CGG | 0.526487 | 3.1:+50428816 | MS.gene41568:CDS |
| TTTGAAACGGTGTCGTTTGG+TGG | 0.527160 | 3.1:-50425704 | None:intergenic |
| TCAGCTTGGAAGCATACAAC+CGG | 0.527645 | 3.1:-50427613 | None:intergenic |
| GTCGAAATGCTGCTGTTGGA+GGG | 0.528973 | 3.1:+50425905 | MS.gene41568:CDS |
| TTACTAATGATGAGATCTGA+TGG | 0.532201 | 3.1:-50431906 | None:intergenic |
| TTAAGTATATACCTGTGAAT+CGG | 0.533217 | 3.1:-50427292 | None:intergenic |
| TCCTCAACACACTGTTGAAG+CGG | 0.533703 | 3.1:+50430240 | MS.gene41568:CDS |
| ATCAACTGATGAGGTTGTAA+AGG | 0.533806 | 3.1:+50431212 | MS.gene41568:CDS |
| ACTAATATTCAGGAGGAAGT+AGG | 0.534263 | 3.1:+50431633 | MS.gene41568:CDS |
| TGCAGAAGCTTGCAGAAACT+AGG | 0.534385 | 3.1:+50431949 | MS.gene41568:CDS |
| TTCCTCAACTCAGCTAGTGC+AGG | 0.535693 | 3.1:-50429691 | None:intergenic |
| TATGTTCTTCTAAATCAGCT+TGG | 0.538352 | 3.1:+50431480 | MS.gene41568:CDS |
| TCATGGAAGCGATTGAATCA+GGG | 0.538421 | 3.1:+50430851 | MS.gene41568:CDS |
| AGTCGAAATGCTGCTGTTGG+AGG | 0.539029 | 3.1:+50425904 | MS.gene41568:CDS |
| CCTTGAAGTTCCTCACCGCC+AGG | 0.540407 | 3.1:-50426818 | None:intergenic |
| ATTATCTTCCATACGACCAC+CGG | 0.540465 | 3.1:-50428835 | None:intergenic |
| GTTACAAATGCTTTGGCCGG+TGG | 0.541797 | 3.1:+50428819 | MS.gene41568:CDS |
| GCTTCCAAGCTGAAATCCAT+TGG | 0.546400 | 3.1:+50427623 | MS.gene41568:CDS |
| TGATGGTGATAGAAAGATTG+AGG | 0.548624 | 3.1:+50428770 | MS.gene41568:CDS |
| TAAGCAGATAAGAGAACTGA+AGG | 0.548866 | 3.1:+50431755 | MS.gene41568:CDS |
| ATAAGAGAACTGAAGGAAGC+TGG | 0.549843 | 3.1:+50431762 | MS.gene41568:CDS |
| GGCACAGGTGGCCAGTATGA+TGG | 0.551859 | 3.1:+50428753 | MS.gene41568:intron |
| TCTTCGTCACATCACCAGTT+AGG | 0.552124 | 3.1:-50431413 | None:intergenic |
| TTAAGACAGAGAAATCATAT+AGG | 0.552664 | 3.1:+50432005 | MS.gene41568:CDS |
| TGAAGAGGGTGGTAAAGGGA+AGG | 0.553250 | 3.1:-50425680 | None:intergenic |
| AAGCTGAAATCCATTGGAAG+AGG | 0.554213 | 3.1:+50427629 | MS.gene41568:CDS |
| CATCTAGGCTCGAAATTAGG+TGG | 0.556655 | 3.1:+50425880 | MS.gene41568:CDS |
| AAGGTGTTTGCGATATACTT+TGG | 0.561172 | 3.1:-50429767 | None:intergenic |
| TTTCGGGGTGGCTGGTGGTG+CGG | 0.567659 | 3.1:+50425936 | MS.gene41568:CDS |
| AATGGGGAAGCCTGGTCAGA+CGG | 0.568326 | 3.1:+50431320 | MS.gene41568:CDS |
| GGAAGTCGAAATGCTGCTGT+TGG | 0.570235 | 3.1:+50425901 | MS.gene41568:CDS |
| TCACTCACAGCCACTATCAT+GGG | 0.570956 | 3.1:+50432182 | MS.gene41568:CDS |
| CACTTTGGTTGTGACTGAGT+TGG | 0.571700 | 3.1:+50431158 | MS.gene41568:CDS |
| GGTGGGATTCTCGGTTTGAG+TGG | 0.572981 | 3.1:+50431501 | MS.gene41568:CDS |
| TCTTCCTTCTTCAACAACAA+AGG | 0.573168 | 3.1:-50426036 | None:intergenic |
| GCATACAAAGAAATTGATTG+TGG | 0.577867 | 3.1:+50428160 | MS.gene41568:CDS |
| AAGCAGATATTGAGCAACGC+AGG | 0.578077 | 3.1:+50427077 | MS.gene41568:CDS |
| TGTTATTGCAGGCGCAGTAG+CGG | 0.578184 | 3.1:+50425849 | MS.gene41568:CDS |
| ACCCGAAGAATATGCTCAGA+AGG | 0.581473 | 3.1:+50431659 | MS.gene41568:CDS |
| TCTACTGCTTCGCTAACTCC+AGG | 0.582281 | 3.1:-50428529 | None:intergenic |
| GTAGCGGCGGGATTTCATCT+AGG | 0.584599 | 3.1:+50425865 | MS.gene41568:CDS |
| CACTGGAGAGTTCGACGAGG+AGG | 0.584773 | 3.1:+50431866 | MS.gene41568:CDS |
| TGTCGTTTGGTGGATGAAGA+GGG | 0.586789 | 3.1:-50425694 | None:intergenic |
| AAACTTACACAGCTCTTGTG+CGG | 0.587812 | 3.1:-50428217 | None:intergenic |
| TTGGTGACTAATGGAGAGCT+TGG | 0.588528 | 3.1:+50430169 | MS.gene41568:CDS |
| AACTGATGAGGTTGTAAAGG+AGG | 0.588721 | 3.1:+50431215 | MS.gene41568:CDS |
| TGTGCTTCCTCCTGGCGGTG+AGG | 0.592591 | 3.1:+50426808 | MS.gene41568:CDS |
| TTCCTGCACTAGCTGAGTTG+AGG | 0.599576 | 3.1:+50429689 | MS.gene41568:CDS |
| CCTCCGCCCAAAGACCTCAC+CGG | 0.599985 | 3.1:+50425769 | MS.gene41568:CDS |
| ACAGTTGACAAAGGCAAAGG+TGG | 0.601199 | 3.1:+50431602 | MS.gene41568:CDS |
| AAATTCACAGCCGCAACTTG+CGG | 0.601207 | 3.1:-50425985 | None:intergenic |
| CTGTCCTATCTCTTTCTGGA+AGG | 0.601426 | 3.1:-50431362 | None:intergenic |
| GAAGAGGGTGGTAAAGGGAA+GGG | 0.601875 | 3.1:-50425679 | None:intergenic |
| AACTGGAAAATACGCTTCCA+AGG | 0.602966 | 3.1:-50427267 | None:intergenic |
| CATGGAAGCGATTGAATCAG+GGG | 0.603458 | 3.1:+50430852 | MS.gene41568:CDS |
| GTGTCGTTTGGTGGATGAAG+AGG | 0.606645 | 3.1:-50425695 | None:intergenic |
| AAATGCTGCTGTTGGAGGGG+CGG | 0.609542 | 3.1:+50425909 | MS.gene41568:CDS |
| TGTGACGAAGATTCCATTTG+GGG | 0.611993 | 3.1:+50431425 | MS.gene41568:CDS |
| GAGGGAGTGAGAGTTTGAAA+CGG | 0.614229 | 3.1:-50425717 | None:intergenic |
| GTTAATCAAGACTGCAGTGG+AGG | 0.616833 | 3.1:+50432341 | MS.gene41568:CDS |
| TAATGGAGAGCTTGGTGAGG+AGG | 0.617175 | 3.1:+50430177 | MS.gene41568:CDS |
| AAACTCACTCATTCAGGCTG+TGG | 0.617684 | 3.1:+50431977 | MS.gene41568:CDS |
| GCTTGGAAGCATACAACCGG+TGG | 0.619486 | 3.1:-50427610 | None:intergenic |
| TCGAAATGCTGCTGTTGGAG+GGG | 0.623409 | 3.1:+50425906 | MS.gene41568:CDS |
| ATTGAAACCGCAGTGACACA+AGG | 0.623723 | 3.1:+50431720 | MS.gene41568:CDS |
| AGCTGATGGACAGTTGACAA+AGG | 0.625998 | 3.1:+50431593 | MS.gene41568:CDS |
| TACTAATGATGAGATCTGAT+GGG | 0.626843 | 3.1:-50431905 | None:intergenic |
| TAGGTTAATCAAGACTGCAG+TGG | 0.630630 | 3.1:+50432338 | MS.gene41568:CDS |
| AAATTCTAAGGAGTCTGCAA+AGG | 0.630689 | 3.1:+50431110 | MS.gene41568:CDS |
| GCCGCTTCAACAGTGTGTTG+AGG | 0.638106 | 3.1:-50430241 | None:intergenic |
| GATGTCGATCTCTTTGCTCG+AGG | 0.644255 | 3.1:+50428610 | MS.gene41568:CDS |
| ACATGGTTTGCAATTAACCA+AGG | 0.647423 | 3.1:+50430921 | MS.gene41568:CDS |
| CAAAGAGATCGACATCCGCA+TGG | 0.647627 | 3.1:-50428603 | None:intergenic |
| TGGACAGTTGACAAAGGCAA+AGG | 0.650574 | 3.1:+50431599 | MS.gene41568:CDS |
| AAACCGCAGTGACACAAGGA+CGG | 0.652554 | 3.1:+50431724 | MS.gene41568:CDS |
| GATGTAGCGAGACGGAGTGG+CGG | 0.656834 | 3.1:-50425820 | None:intergenic |
| GCAACTAACTAATATTCAGG+AGG | 0.659564 | 3.1:+50431626 | MS.gene41568:CDS |
| TGGCGTTGATTTAGACAACA+TGG | 0.661005 | 3.1:+50431782 | MS.gene41568:CDS |
| AGCAGATATTGAGCAACGCA+GGG | 0.661159 | 3.1:+50427078 | MS.gene41568:CDS |
| TCGTCTGTGCTTCCTCCTGG+CGG | 0.664379 | 3.1:+50426803 | MS.gene41568:CDS |
| CTATACGTGACAATGCCCAC+CGG | 0.667290 | 3.1:+50427594 | MS.gene41568:CDS |
| ACAGAGAAATCATATAGGAG+TGG | 0.668063 | 3.1:+50432010 | MS.gene41568:CDS |
| CTTGGAAGCATACAACCGGT+GGG | 0.669381 | 3.1:-50427609 | None:intergenic |
| TGCTGATGTATCAACTGATG+AGG | 0.679643 | 3.1:+50431203 | MS.gene41568:CDS |
| GCGGATGTAGCGAGACGGAG+TGG | 0.680277 | 3.1:-50425823 | None:intergenic |
| TCAGTACGAAAAGCAGCACA+TGG | 0.680845 | 3.1:+50430904 | MS.gene41568:CDS |
| GCGGCTCATTCAGATATCTG+TGG | 0.688672 | 3.1:+50430259 | MS.gene41568:CDS |
| GTTGGTGAATGACATTAAAG+GGG | 0.688901 | 3.1:+50431176 | MS.gene41568:CDS |
| CAGCCGTCCTTGTGTCACTG+CGG | 0.690164 | 3.1:-50431727 | None:intergenic |
| GGGCCCGGATCACTAACAAG+AGG | 0.692559 | 3.1:+50431445 | MS.gene41568:CDS |
| TACTGCGCCTGCAATAACAA+CGG | 0.696241 | 3.1:-50425845 | None:intergenic |
| GACTAATGGAGAGCTTGGTG+AGG | 0.696243 | 3.1:+50430174 | MS.gene41568:CDS |
| CAACGGCGGATGTAGCGAGA+CGG | 0.699769 | 3.1:-50425828 | None:intergenic |
| TGCGCCTGCAATAACAACGG+CGG | 0.700336 | 3.1:-50425842 | None:intergenic |
| TGAGGAACTTCAAGGTGACG+AGG | 0.702194 | 3.1:+50426826 | MS.gene41568:CDS |
| ACTATCATGGGAATTGCCAG+AGG | 0.706284 | 3.1:+50432194 | MS.gene41568:CDS |
| TGAAGTTCCTCACCGCCAGG+AGG | 0.709242 | 3.1:-50426815 | None:intergenic |
| CGTTTGGTGGATGAAGAGGG+TGG | 0.718389 | 3.1:-50425691 | None:intergenic |
| ACTTACATAAAACGTGCACG+AGG | 0.718892 | 3.1:+50431081 | MS.gene41568:CDS |
| ATTCCGGTGAGGTCTTTGGG+CGG | 0.726694 | 3.1:-50425772 | None:intergenic |
| AAGGCCTGCAAAATTCACGA+AGG | 0.736937 | 3.1:+50429883 | MS.gene41568:CDS |
| CATATCGTTAAAGAACCATG+CGG | 0.752667 | 3.1:+50428588 | MS.gene41568:CDS |
| AGGCACTGGAGAGTTCGACG+AGG | 0.790173 | 3.1:+50431863 | MS.gene41568:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAATAAATAAAAACTT+GGG | - | chr3.1:50428440-50428459 | None:intergenic | 10.0% |
| !! | AATTAAGCTTATATTAATTA+AGG | - | chr3.1:50429523-50429542 | None:intergenic | 10.0% |
| !! | ATTATCTTAATAAATTTACA+TGG | - | chr3.1:50430614-50430633 | None:intergenic | 10.0% |
| !! | TAAAGAAATAAATAAAAACT+TGG | - | chr3.1:50428441-50428460 | None:intergenic | 10.0% |
| !!! | GAATTATGTTTTTTTTTTAT+AGG | + | chr3.1:50430825-50430844 | MS.gene41568:intron | 10.0% |
| !! | AAAGAACTTGTAAAAAAAAT+GGG | + | chr3.1:50431303-50431322 | MS.gene41568:CDS | 15.0% |
| !! | AATTGAATTAATCACAAATT+CGG | + | chr3.1:50426378-50426397 | MS.gene41568:intron | 15.0% |
| !! | ATTCATATAGAAACAATAAT+AGG | - | chr3.1:50427535-50427554 | None:intergenic | 15.0% |
| !! | ATTGTATTATAGAGAAAATT+TGG | - | chr3.1:50429198-50429217 | None:intergenic | 15.0% |
| !! | TAACTAGATATTAATTAGAA+TGG | + | chr3.1:50430473-50430492 | MS.gene41568:intron | 15.0% |
| !! | TAGCTATAAAAAATTAACTT+AGG | - | chr3.1:50430322-50430341 | None:intergenic | 15.0% |
| !! | TTAATATCCAATGAAATATT+TGG | - | chr3.1:50428985-50429004 | None:intergenic | 15.0% |
| !! | TTAGAAAATTTATAAGTGTT+TGG | + | chr3.1:50429031-50429050 | MS.gene41568:intron | 15.0% |
| !!! | AAATGTTTTTCTTAATTGTT+TGG | - | chr3.1:50428919-50428938 | None:intergenic | 15.0% |
| !!! | AGTTATGAGTTATATATTTT+CGG | + | chr3.1:50426227-50426246 | MS.gene41568:intron | 15.0% |
| !!! | ATATTAATTAGAATGGTTTT+TGG | + | chr3.1:50430480-50430499 | MS.gene41568:intron | 15.0% |
| !!! | TGATTTACATTGATAATTAT+GGG | + | chr3.1:50426340-50426359 | MS.gene41568:intron | 15.0% |
| !!! | TTATTTATGAGGATTTTTAA+TGG | + | chr3.1:50431004-50431023 | MS.gene41568:intron | 15.0% |
| !!! | TTGATTTACATTGATAATTA+TGG | + | chr3.1:50426339-50426358 | MS.gene41568:intron | 15.0% |
| !! | AAGAACTTGTAAAAAAAATG+GGG | + | chr3.1:50431304-50431323 | MS.gene41568:CDS | 20.0% |
| !! | AAGCTATTATTTACATATAC+TGG | - | chr3.1:50427129-50427148 | None:intergenic | 20.0% |
| !! | ATAGATTGGATCTATATTAA+TGG | - | chr3.1:50429144-50429163 | None:intergenic | 20.0% |
| !! | ATATAAAAATTGACAACTTG+AGG | - | chr3.1:50427730-50427749 | None:intergenic | 20.0% |
| !! | ATATTCTAAACTAAAGTCTT+GGG | + | chr3.1:50429384-50429403 | MS.gene41568:intron | 20.0% |
| !! | ATCAATTCAAATAAACCTAT+TGG | - | chr3.1:50426076-50426095 | None:intergenic | 20.0% |
| !! | CAAAGAACTTGTAAAAAAAA+TGG | + | chr3.1:50431302-50431321 | MS.gene41568:CDS | 20.0% |
| !! | CTATAAAAAATTAACTTAGG+AGG | - | chr3.1:50430319-50430338 | None:intergenic | 20.0% |
| !! | CTCATAACTCATAATAATAT+AGG | - | chr3.1:50426216-50426235 | None:intergenic | 20.0% |
| !! | GGATATTAAAAAAGTTGTAT+GGG | + | chr3.1:50428996-50429015 | MS.gene41568:intron | 20.0% |
| !! | GGTTAATTATGTGAAAAATA+TGG | + | chr3.1:50426311-50426330 | MS.gene41568:intron | 20.0% |
| !! | TGATCATATTTGTAATGAAA+TGG | + | chr3.1:50427678-50427697 | MS.gene41568:intron | 20.0% |
| !! | TGGATATTAAAAAAGTTGTA+TGG | + | chr3.1:50428995-50429014 | MS.gene41568:intron | 20.0% |
| !! | TTAATATAGATCCAATCTAT+TGG | + | chr3.1:50429144-50429163 | MS.gene41568:intron | 20.0% |
| !! | TTGAGATAAAAAATGTTTCA+TGG | + | chr3.1:50426264-50426283 | MS.gene41568:intron | 20.0% |
| !!! | AATGCTTAATTTTTTAGGTA+TGG | + | chr3.1:50426560-50426579 | MS.gene41568:intron | 20.0% |
| !!! | ACCATTTTTTCATAAAAACA+AGG | + | chr3.1:50426290-50426309 | MS.gene41568:intron | 20.0% |
| !!! | ACCTTGTTTTTATGAAAAAA+TGG | - | chr3.1:50426294-50426313 | None:intergenic | 20.0% |
| !!! | ATATGTAAATAATAGCTTTG+TGG | + | chr3.1:50427131-50427150 | MS.gene41568:intron | 20.0% |
| !!! | ATATGTTTCTAAATTCAGTT+AGG | + | chr3.1:50432071-50432090 | MS.gene41568:intron | 20.0% |
| !!! | ATTATTTACATATACTGGTT+CGG | - | chr3.1:50427124-50427143 | None:intergenic | 20.0% |
| !!! | ATTCATCACATAAATTTTGT+AGG | - | chr3.1:50429846-50429865 | None:intergenic | 20.0% |
| !!! | ATTGTTTCTATATGAATAGA+TGG | + | chr3.1:50427538-50427557 | MS.gene41568:intron | 20.0% |
| !!! | TATGTTTCTAAATTCAGTTA+GGG | + | chr3.1:50432072-50432091 | MS.gene41568:intron | 20.0% |
| !!! | TTTGCAATGCTTAATTTTTT+AGG | + | chr3.1:50426555-50426574 | MS.gene41568:intron | 20.0% |
| !!! | TTTTTTTTTATAGGTTGTCA+TGG | + | chr3.1:50430834-50430853 | MS.gene41568:intron | 20.0% |
| ! | AATAATATATTCCTGGTTTC+AGG | + | chr3.1:50427562-50427581 | MS.gene41568:intron | 25.0% |
| ! | AATATCTGGTGAGAAATATT+CGG | - | chr3.1:50427918-50427937 | None:intergenic | 25.0% |
| ! | AATATGTTTCATATCATGAC+TGG | + | chr3.1:50426964-50426983 | MS.gene41568:intron | 25.0% |
| ! | AATGCATAAAAATCCAACAT+GGG | - | chr3.1:50428283-50428302 | None:intergenic | 25.0% |
| ! | ACTCATTTATTAGAGAAAAG+AGG | + | chr3.1:50429598-50429617 | MS.gene41568:intron | 25.0% |
| ! | AGAGTTACATAATTCAGAAT+TGG | - | chr3.1:50427819-50427838 | None:intergenic | 25.0% |
| ! | ATATCTTGATCCTTAACTTA+AGG | + | chr3.1:50430006-50430025 | MS.gene41568:intron | 25.0% |
| ! | ATCAAATTTAAGCATGCTTT+AGG | + | chr3.1:50426860-50426879 | MS.gene41568:CDS | 25.0% |
| ! | ATGACTTTCAAATAGTTCAT+TGG | + | chr3.1:50428067-50428086 | MS.gene41568:intron | 25.0% |
| ! | ATGATCACTTTGTCAATAAA+TGG | - | chr3.1:50430361-50430380 | None:intergenic | 25.0% |
| ! | ATTATTACTATACCTGTGAA+AGG | + | chr3.1:50426125-50426144 | MS.gene41568:intron | 25.0% |
| ! | CAAATTTAATAGTATGCAGA+TGG | - | chr3.1:50430663-50430682 | None:intergenic | 25.0% |
| ! | CAACAAGTTTAATCAGAATT+TGG | - | chr3.1:50429222-50429241 | None:intergenic | 25.0% |
| ! | CATATTTGTAATGAAATGGA+TGG | + | chr3.1:50427682-50427701 | MS.gene41568:intron | 25.0% |
| ! | GAACTATTTGAAAGTCATAA+AGG | - | chr3.1:50428065-50428084 | None:intergenic | 25.0% |
| ! | GATATTCTAAACTAAAGTCT+TGG | + | chr3.1:50429383-50429402 | MS.gene41568:intron | 25.0% |
| ! | GATCTTTCCAAATATTTCAT+TGG | + | chr3.1:50428975-50428994 | MS.gene41568:intron | 25.0% |
| ! | GTAATGATACATCATATACA+TGG | - | chr3.1:50426471-50426490 | None:intergenic | 25.0% |
| ! | TAAGAAAAACGTAGAATTAG+TGG | + | chr3.1:50427866-50427885 | MS.gene41568:intron | 25.0% |
| ! | TATAGATTTGACATTCAACA+TGG | - | chr3.1:50428393-50428412 | None:intergenic | 25.0% |
| ! | TATGAAGTTATGTGAGAAAT+GGG | + | chr3.1:50426702-50426721 | MS.gene41568:intron | 25.0% |
| ! | TATTCTAAACTAAAGTCTTG+GGG | + | chr3.1:50429385-50429404 | MS.gene41568:intron | 25.0% |
| ! | TGATCACTTTGTCAATAAAT+GGG | - | chr3.1:50430360-50430379 | None:intergenic | 25.0% |
| ! | TGTGGATTCAAATGAAAAAA+TGG | + | chr3.1:50427149-50427168 | MS.gene41568:intron | 25.0% |
| ! | TTAAGACAGAGAAATCATAT+AGG | + | chr3.1:50432005-50432024 | MS.gene41568:CDS | 25.0% |
| ! | TTAAGTATATACCTGTGAAT+CGG | - | chr3.1:50427295-50427314 | None:intergenic | 25.0% |
| ! | TTATTACTATACCTGTGAAA+GGG | + | chr3.1:50426126-50426145 | MS.gene41568:intron | 25.0% |
| !! | AAAATTGGTGGTTATTTATG+AGG | + | chr3.1:50430993-50431012 | MS.gene41568:intron | 25.0% |
| !! | ATTCAACATGGAAATGTTTT+GGG | - | chr3.1:50428381-50428400 | None:intergenic | 25.0% |
| !! | ATTTTGTAACGTAGTTAACA+AGG | + | chr3.1:50426421-50426440 | MS.gene41568:intron | 25.0% |
| !! | GTATCTTCTTTTATAGTTGT+TGG | + | chr3.1:50430053-50430072 | MS.gene41568:intron | 25.0% |
| !! | TGCTTTGTTATCTATTAGTT+TGG | + | chr3.1:50429098-50429117 | MS.gene41568:intron | 25.0% |
| !! | TTGAGATAAATGTTTTCATG+AGG | + | chr3.1:50428950-50428969 | MS.gene41568:intron | 25.0% |
| !! | TTTTTACAAGTTCTTTGTCA+GGG | - | chr3.1:50431299-50431318 | None:intergenic | 25.0% |
| !!! | ACTCAAAGTGTTGAAAAATT+TGG | - | chr3.1:50429971-50429990 | None:intergenic | 25.0% |
| !!! | CAGTGCTTATTTTAAAACAA+TGG | - | chr3.1:50428872-50428891 | None:intergenic | 25.0% |
| !!! | TAATTGATAGTACTGATATG+TGG | + | chr3.1:50430743-50430762 | MS.gene41568:intron | 25.0% |
| !!! | TCTGATTAAACTTGTTGTTT+GGG | + | chr3.1:50429225-50429244 | MS.gene41568:intron | 25.0% |
| !!! | TTCTGATTAAACTTGTTGTT+TGG | + | chr3.1:50429224-50429243 | MS.gene41568:intron | 25.0% |
| !!! | TTTTTTACAAGTTCTTTGTC+AGG | - | chr3.1:50431300-50431319 | None:intergenic | 25.0% |
| AAAAAAGTTGTATGGGAAGT+GGG | + | chr3.1:50429003-50429022 | MS.gene41568:intron | 30.0% | |
| AAAAACTGAAGACGAAGAAT+GGG | + | chr3.1:50431245-50431264 | MS.gene41568:CDS | 30.0% | |
| AAAGCTAAAGCTATTTAGCA+AGG | - | chr3.1:50429412-50429431 | None:intergenic | 30.0% | |
| AACTTAAAATTTCTCAGTCC+TGG | + | chr3.1:50428511-50428530 | MS.gene41568:intron | 30.0% | |
| AATAGACAAAGCAATTTCCT+TGG | - | chr3.1:50430941-50430960 | None:intergenic | 30.0% | |
| AATTGTATTATCGTGCACAT+GGG | + | chr3.1:50427392-50427411 | MS.gene41568:intron | 30.0% | |
| ACTTTCAAATAGTTCATTGG+TGG | + | chr3.1:50428070-50428089 | MS.gene41568:intron | 30.0% | |
| AGATGGCAATAATATATTCC+TGG | + | chr3.1:50427555-50427574 | MS.gene41568:intron | 30.0% | |
| AGCATATGTTACAAATGCTT+TGG | + | chr3.1:50428812-50428831 | MS.gene41568:CDS | 30.0% | |
| AGTCAAGAATGACATGAATA+TGG | + | chr3.1:50427459-50427478 | MS.gene41568:intron | 30.0% | |
| AGTTGCTTATCTTACTTGTT+TGG | + | chr3.1:50426991-50427010 | MS.gene41568:intron | 30.0% | |
| ATAGATAACAAAGCAAAGCA+AGG | - | chr3.1:50429093-50429112 | None:intergenic | 30.0% | |
| ATGCATAAAAATCCAACATG+GGG | - | chr3.1:50428282-50428301 | None:intergenic | 30.0% | |
| ATGGAAGATAATAAGGTAAG+TGG | + | chr3.1:50428846-50428865 | MS.gene41568:intron | 30.0% | |
| ATGGATATGATGCTGAAATT+AGG | + | chr3.1:50430878-50430897 | MS.gene41568:CDS | 30.0% | |
| CATTAAAATTACAAGACACG+AGG | - | chr3.1:50427485-50427504 | None:intergenic | 30.0% | |
| CTAACATACAAGTCAAGTAT+TGG | - | chr3.1:50429572-50429591 | None:intergenic | 30.0% | |
| CTATGAAGTTATGTGAGAAA+TGG | + | chr3.1:50426701-50426720 | MS.gene41568:intron | 30.0% | |
| CTTTCAAATAGTTCATTGGT+GGG | + | chr3.1:50428071-50428090 | MS.gene41568:intron | 30.0% | |
| GAAAAATTTGGCACAAAATG+TGG | - | chr3.1:50429959-50429978 | None:intergenic | 30.0% | |
| GAAGTGTAATAAGTTGTTCA+GGG | - | chr3.1:50427943-50427962 | None:intergenic | 30.0% | |
| GAATGCATAAAAATCCAACA+TGG | - | chr3.1:50428284-50428303 | None:intergenic | 30.0% | |
| GAGTATAACTACTACCAAAA+TGG | + | chr3.1:50431689-50431708 | MS.gene41568:CDS | 30.0% | |
| GATGATAACTTTCAACACTT+TGG | + | chr3.1:50431143-50431162 | MS.gene41568:CDS | 30.0% | |
| GATTAACTGTTATGCAATGA+CGG | - | chr3.1:50426192-50426211 | None:intergenic | 30.0% | |
| GCATACAAAGAAATTGATTG+TGG | + | chr3.1:50428160-50428179 | MS.gene41568:CDS | 30.0% | |
| GGACTAGAATAACAAAATGA+TGG | - | chr3.1:50427514-50427533 | None:intergenic | 30.0% | |
| GTACTGGAGATTTACTATTA+TGG | - | chr3.1:50427182-50427201 | None:intergenic | 30.0% | |
| GTTAACTACGTTACAAAATG+TGG | - | chr3.1:50426420-50426439 | None:intergenic | 30.0% | |
| TAAAAAAGTTGTATGGGAAG+TGG | + | chr3.1:50429002-50429021 | MS.gene41568:intron | 30.0% | |
| TAATAGTAAATCTCCAGTAC+AGG | + | chr3.1:50427182-50427201 | MS.gene41568:intron | 30.0% | |
| TAATTGTATTATCGTGCACA+TGG | + | chr3.1:50427391-50427410 | MS.gene41568:intron | 30.0% | |
| TACTAATGATGAGATCTGAT+GGG | - | chr3.1:50431908-50431927 | None:intergenic | 30.0% | |
| TATCCATGTGTCAAGAAAAT+TGG | + | chr3.1:50430978-50430997 | MS.gene41568:intron | 30.0% | |
| TATGTTCTTCTAAATCAGCT+TGG | + | chr3.1:50431480-50431499 | MS.gene41568:CDS | 30.0% | |
| TGCCAATCAAATATGAACTA+CGG | - | chr3.1:50428737-50428756 | None:intergenic | 30.0% | |
| TGGATTACTCTTCATGAATA+TGG | - | chr3.1:50432238-50432257 | None:intergenic | 30.0% | |
| TTACTAATGATGAGATCTGA+TGG | - | chr3.1:50431909-50431928 | None:intergenic | 30.0% | |
| TTCTCACATAACTTCATAGT+TGG | - | chr3.1:50426700-50426719 | None:intergenic | 30.0% | |
| TTGCTCTTCAAAAAAACTGT+TGG | + | chr3.1:50431825-50431844 | MS.gene41568:CDS | 30.0% | |
| TTGTCTTCATACGATTAAAG+TGG | + | chr3.1:50427367-50427386 | MS.gene41568:intron | 30.0% | |
| TTTGAGTGGTAAAGAAATAG+TGG | + | chr3.1:50431515-50431534 | MS.gene41568:CDS | 30.0% | |
| ! | ATCTATTAGTTTGGCATTTC+AGG | + | chr3.1:50429107-50429126 | MS.gene41568:intron | 30.0% |
| ! | ATTGAACATTCTAGCTGTAT+TGG | + | chr3.1:50429063-50429082 | MS.gene41568:intron | 30.0% |
| ! | ATTTTGTGTTCTTTTCAGCT+TGG | - | chr3.1:50430709-50430728 | None:intergenic | 30.0% |
| ! | CATTCAACATGGAAATGTTT+TGG | - | chr3.1:50428382-50428401 | None:intergenic | 30.0% |
| ! | GTTTGGAGCAAAAAAAATTC+AGG | - | chr3.1:50428902-50428921 | None:intergenic | 30.0% |
| ! | TCGACAATTCTTTTTATCGA+GGG | + | chr3.1:50428302-50428321 | MS.gene41568:intron | 30.0% |
| ! | TTACTTCTCATCTTTTGTGT+AGG | + | chr3.1:50432119-50432138 | MS.gene41568:intron | 30.0% |
| ! | TTCAAATGCTTCTTTTCTCT+TGG | + | chr3.1:50428034-50428053 | MS.gene41568:intron | 30.0% |
| ! | TTCACTTCGACTTTTTATTC+AGG | + | chr3.1:50426774-50426793 | MS.gene41568:intron | 30.0% |
| ! | TTCGACAATTCTTTTTATCG+AGG | + | chr3.1:50428301-50428320 | MS.gene41568:intron | 30.0% |
| ! | TTTGTGTCATATCTCGTTTT+TGG | + | chr3.1:50427222-50427241 | MS.gene41568:CDS | 30.0% |
| !! | AGTTGGTGAATGACATTAAA+GGG | + | chr3.1:50431175-50431194 | MS.gene41568:CDS | 30.0% |
| !! | CAATACTTGACTTGTATGTT+AGG | + | chr3.1:50429570-50429589 | MS.gene41568:intron | 30.0% |
| !! | TTTGTTTTTCTGTCTTGCAA+GGG | + | chr3.1:50430782-50430801 | MS.gene41568:intron | 30.0% |
| !! | TTTTAGGTATGGTGTGAAAA+AGG | + | chr3.1:50426571-50426590 | MS.gene41568:intron | 30.0% |
| !!! | GATGTGCAATGTTAGTTTTT+GGG | - | chr3.1:50427424-50427443 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTTCTGTCTTGCA+AGG | + | chr3.1:50430781-50430800 | MS.gene41568:intron | 30.0% |
| ACAGAGAAATCATATAGGAG+TGG | + | chr3.1:50432010-50432029 | MS.gene41568:CDS | 35.0% | |
| ACTAATATTCAGGAGGAAGT+AGG | + | chr3.1:50431633-50431652 | MS.gene41568:CDS | 35.0% | |
| ACTGTTACAGCCTTAAGTTA+AGG | - | chr3.1:50430019-50430038 | None:intergenic | 35.0% | |
| AGAAGAGCTTGATAAGATCT+TGG | + | chr3.1:50428549-50428568 | MS.gene41568:CDS | 35.0% | |
| AGTTCATATTTGATTGGCAC+AGG | + | chr3.1:50428738-50428757 | MS.gene41568:intron | 35.0% | |
| ATATGTATATCAGCTGCATC+TGG | - | chr3.1:50426896-50426915 | None:intergenic | 35.0% | |
| ATATTGATCGAATCGCCAAT+AGG | + | chr3.1:50426058-50426077 | MS.gene41568:CDS | 35.0% | |
| ATCAACTGATGAGGTTGTAA+AGG | + | chr3.1:50431212-50431231 | MS.gene41568:CDS | 35.0% | |
| ATGTGACGAAGATTCCATTT+GGG | + | chr3.1:50431424-50431443 | MS.gene41568:CDS | 35.0% | |
| ATGTGTGTTAATTGTGTGCA+TGG | + | chr3.1:50426929-50426948 | MS.gene41568:intron | 35.0% | |
| ATTGCACTTTGATCCACTAA+AGG | + | chr3.1:50429864-50429883 | MS.gene41568:CDS | 35.0% | |
| CAAAAACTGAAGACGAAGAA+TGG | + | chr3.1:50431244-50431263 | MS.gene41568:CDS | 35.0% | |
| CATATCGTTAAAGAACCATG+CGG | + | chr3.1:50428588-50428607 | MS.gene41568:CDS | 35.0% | |
| CGAAGTGTAATAAGTTGTTC+AGG | - | chr3.1:50427944-50427963 | None:intergenic | 35.0% | |
| GACCGTAGTTCATATTTGAT+TGG | + | chr3.1:50428732-50428751 | MS.gene41568:intron | 35.0% | |
| GCAACTAACTAATATTCAGG+AGG | + | chr3.1:50431626-50431645 | MS.gene41568:CDS | 35.0% | |
| GGAGCAACTAACTAATATTC+AGG | + | chr3.1:50431623-50431642 | MS.gene41568:CDS | 35.0% | |
| GTCAACAAACCTAAACCTAT+CGG | - | chr3.1:50430435-50430454 | None:intergenic | 35.0% | |
| GTTATCAAACTCACTCATTC+AGG | + | chr3.1:50431971-50431990 | MS.gene41568:CDS | 35.0% | |
| TAAGCAGATAAGAGAACTGA+AGG | + | chr3.1:50431755-50431774 | MS.gene41568:CDS | 35.0% | |
| TACACAATTACCTCTTCCAA+TGG | - | chr3.1:50427642-50427661 | None:intergenic | 35.0% | |
| TACCTTCTGAGCATATTCTT+CGG | - | chr3.1:50431664-50431683 | None:intergenic | 35.0% | |
| TATGTTACAAATGCTTTGGC+CGG | + | chr3.1:50428816-50428835 | MS.gene41568:CDS | 35.0% | |
| TCTTCCTTCTTCAACAACAA+AGG | - | chr3.1:50426039-50426058 | None:intergenic | 35.0% | |
| TCTTTCTATCACCATCATAC+TGG | - | chr3.1:50428767-50428786 | None:intergenic | 35.0% | |
| TGCAGCTGATATACATATAG+AGG | + | chr3.1:50426898-50426917 | MS.gene41568:CDS | 35.0% | |
| TGGTCGTATGGAAGATAATA+AGG | + | chr3.1:50428839-50428858 | MS.gene41568:CDS | 35.0% | |
| TGTACAATCTGTAATGTGAC+TGG | + | chr3.1:50427341-50427360 | MS.gene41568:intron | 35.0% | |
| TTCAGAACACTTGTTCATGT+TGG | + | chr3.1:50429313-50429332 | MS.gene41568:intron | 35.0% | |
| TTCTTCTAAATCAGCTTGGT+GGG | + | chr3.1:50431484-50431503 | MS.gene41568:CDS | 35.0% | |
| TTGTCAATAAATGGGTGCAT+GGG | - | chr3.1:50430352-50430371 | None:intergenic | 35.0% | |
| TTTCATCTAGGCTCGAAATT+AGG | + | chr3.1:50425877-50425896 | MS.gene41568:CDS | 35.0% | |
| TTTGTCAATAAATGGGTGCA+TGG | - | chr3.1:50430353-50430372 | None:intergenic | 35.0% | |
| ! | AAATTCTAAGGAGTCTGCAA+AGG | + | chr3.1:50431110-50431129 | MS.gene41568:CDS | 35.0% |
| ! | AAGGTGTTTGCGATATACTT+TGG | - | chr3.1:50429770-50429789 | None:intergenic | 35.0% |
| ! | AAGTTTTCAGCAAGCTTCAA+AGG | - | chr3.1:50428131-50428150 | None:intergenic | 35.0% |
| ! | ACATGGTTTGCAATTAACCA+AGG | + | chr3.1:50430921-50430940 | MS.gene41568:CDS | 35.0% |
| ! | AGAGTACCTTTCCAAACAAA+CGG | - | chr3.1:50430285-50430304 | None:intergenic | 35.0% |
| ! | ATGGGTCATGATTTTCTGTA+TGG | + | chr3.1:50426720-50426739 | MS.gene41568:intron | 35.0% |
| ! | GAAAATTTTCCTACCAACCT+AGG | - | chr3.1:50427029-50427048 | None:intergenic | 35.0% |
| ! | GTTGGTGAATGACATTAAAG+GGG | + | chr3.1:50431176-50431195 | MS.gene41568:CDS | 35.0% |
| ! | TACTTGCTTTATTGCCTAAC+TGG | + | chr3.1:50431399-50431418 | MS.gene41568:CDS | 35.0% |
| ! | TGATGGTGATAGAAAGATTG+AGG | + | chr3.1:50428770-50428789 | MS.gene41568:CDS | 35.0% |
| ! | TTACTTGCGAGTTTTACATG+TGG | + | chr3.1:50429352-50429371 | MS.gene41568:intron | 35.0% |
| ! | TTCTGGTGGTGAATTAGAAA+TGG | + | chr3.1:50429801-50429820 | MS.gene41568:CDS | 35.0% |
| ! | TTTCAACACTTTGAGTTCTG+AGG | + | chr3.1:50429975-50429994 | MS.gene41568:intron | 35.0% |
| !! | CTGAGTTGAGGAACATTTTT+GGG | + | chr3.1:50429701-50429720 | MS.gene41568:CDS | 35.0% |
| !! | GAGTTGGTGAATGACATTAA+AGG | + | chr3.1:50431174-50431193 | MS.gene41568:CDS | 35.0% |
| !! | GGTGTTGTTGTACAAAAAGT+AGG | + | chr3.1:50426442-50426461 | MS.gene41568:intron | 35.0% |
| !! | GTAGGAAAATTTTCAGGCTA+AGG | + | chr3.1:50427035-50427054 | MS.gene41568:CDS | 35.0% |
| !! | TCATCCTTTGTTGTTGAAGA+AGG | + | chr3.1:50426032-50426051 | MS.gene41568:CDS | 35.0% |
| !! | TTAGGTTTGTTGACACTTGT+TGG | + | chr3.1:50430441-50430460 | MS.gene41568:intron | 35.0% |
| !! | TTTGGTTCTTGTTAATGCCT+AGG | + | chr3.1:50427009-50427028 | MS.gene41568:intron | 35.0% |
| !!! | AGGTTGGTAGGAAAATTTTC+AGG | + | chr3.1:50427029-50427048 | MS.gene41568:intron | 35.0% |
| !!! | CGAGGGATTTTTGTCATTTT+AGG | + | chr3.1:50428319-50428338 | MS.gene41568:intron | 35.0% |
| !!! | CTGTGTAAGTTTTCTAGTTC+TGG | + | chr3.1:50428228-50428247 | MS.gene41568:intron | 35.0% |
| !!! | GGATGTGCAATGTTAGTTTT+TGG | - | chr3.1:50427425-50427444 | None:intergenic | 35.0% |
| !!! | GTTGGTGATATTTTCTCATC+AGG | + | chr3.1:50431843-50431862 | MS.gene41568:CDS | 35.0% |
| !!! | TAGAATGGTTTTTGGCTTCT+AGG | + | chr3.1:50430488-50430507 | MS.gene41568:intron | 35.0% |
| !!! | TCTGTATGGCTTTTGAAGTT+TGG | + | chr3.1:50426734-50426753 | MS.gene41568:intron | 35.0% |
| !!! | TTGAGGAACATTTTTGGGTT+GGG | + | chr3.1:50429706-50429725 | MS.gene41568:CDS | 35.0% |
| AAACGAGACTCAGAGAAACA+AGG | - | chr3.1:50429264-50429283 | None:intergenic | 40.0% | |
| AAACTTACACAGCTCTTGTG+CGG | - | chr3.1:50428220-50428239 | None:intergenic | 40.0% | |
| AAATACGCTTCCAAGGTAGA+AGG | - | chr3.1:50427263-50427282 | None:intergenic | 40.0% | |
| AACTGATGAGGTTGTAAAGG+AGG | + | chr3.1:50431215-50431234 | MS.gene41568:CDS | 40.0% | |
| AACTGGAAAATACGCTTCCA+AGG | - | chr3.1:50427270-50427289 | None:intergenic | 40.0% | |
| AAGCTGAAATCCATTGGAAG+AGG | + | chr3.1:50427629-50427648 | MS.gene41568:CDS | 40.0% | |
| AATCATATAGGAGTGGTCAG+TGG | + | chr3.1:50432017-50432036 | MS.gene41568:intron | 40.0% | |
| ACCTTCTGAGCATATTCTTC+GGG | - | chr3.1:50431663-50431682 | None:intergenic | 40.0% | |
| ACTTACATAAAACGTGCACG+AGG | + | chr3.1:50431081-50431100 | MS.gene41568:CDS | 40.0% | |
| AGAAGATAGACAACCTCTCA+TGG | - | chr3.1:50430558-50430577 | None:intergenic | 40.0% | |
| AGATCTGTCCTATCTCTTTC+TGG | - | chr3.1:50431369-50431388 | None:intergenic | 40.0% | |
| AGCTTACCCAGAAAAGAAAC+TGG | - | chr3.1:50428643-50428662 | None:intergenic | 40.0% | |
| AGTTGTTCAGGGTCAATATC+TGG | - | chr3.1:50427932-50427951 | None:intergenic | 40.0% | |
| ATAAGAGAACTGAAGGAAGC+TGG | + | chr3.1:50431762-50431781 | MS.gene41568:CDS | 40.0% | |
| ATAGATCCAATCTATTGGCG+AGG | + | chr3.1:50429149-50429168 | MS.gene41568:intron | 40.0% | |
| ATGACCTTCCAGAAAGAGAT+AGG | + | chr3.1:50431358-50431377 | MS.gene41568:CDS | 40.0% | |
| ATTATCTTCCATACGACCAC+CGG | - | chr3.1:50428838-50428857 | None:intergenic | 40.0% | |
| ATTCCTCTTGTTAGTGATCC+GGG | - | chr3.1:50431451-50431470 | None:intergenic | 40.0% | |
| ATTGCCATGAGTTAGCATTC+AGG | + | chr3.1:50429470-50429489 | MS.gene41568:intron | 40.0% | |
| CATCATCTTTCCTTCTACCT+TGG | + | chr3.1:50427250-50427269 | MS.gene41568:CDS | 40.0% | |
| CATTCCTCTTGTTAGTGATC+CGG | - | chr3.1:50431452-50431471 | None:intergenic | 40.0% | |
| CCATGTGTCAAGAAAATTGG+TGG | + | chr3.1:50430981-50431000 | MS.gene41568:intron | 40.0% | |
| CTTACCTGAATGCTAACTCA+TGG | - | chr3.1:50429477-50429496 | None:intergenic | 40.0% | |
| CTTGACTATACACACATGCA+AGG | - | chr3.1:50427446-50427465 | None:intergenic | 40.0% | |
| CTTGCAAGGGTCGTTTAAAA+TGG | + | chr3.1:50430795-50430814 | MS.gene41568:intron | 40.0% | |
| GACTCAGAGAAACAAGGATT+AGG | - | chr3.1:50429258-50429277 | None:intergenic | 40.0% | |
| GATGTGACGAAGATTCCATT+TGG | + | chr3.1:50431423-50431442 | MS.gene41568:CDS | 40.0% | |
| GTAAAAAAAATGGGGAAGCC+TGG | + | chr3.1:50431312-50431331 | MS.gene41568:CDS | 40.0% | |
| GTTCTTCTAAATCAGCTTGG+TGG | + | chr3.1:50431483-50431502 | MS.gene41568:CDS | 40.0% | |
| GTTCTTGTTAATGCCTAGGT+TGG | + | chr3.1:50427013-50427032 | MS.gene41568:intron | 40.0% | |
| TAAATCACTGTCCCTTTCAC+AGG | - | chr3.1:50426140-50426159 | None:intergenic | 40.0% | |
| TAGGTATGGTGTGAAAAAGG+AGG | + | chr3.1:50426574-50426593 | MS.gene41568:intron | 40.0% | |
| TAGGTTAATCAAGACTGCAG+TGG | + | chr3.1:50432338-50432357 | MS.gene41568:CDS | 40.0% | |
| TCATATTTGATTGGCACAGG+TGG | + | chr3.1:50428741-50428760 | MS.gene41568:intron | 40.0% | |
| TCATGGAAGCGATTGAATCA+GGG | + | chr3.1:50430851-50430870 | MS.gene41568:CDS | 40.0% | |
| TGCTGATGTATCAACTGATG+AGG | + | chr3.1:50431203-50431222 | MS.gene41568:CDS | 40.0% | |
| TGCTTTGTCTATTGCAAGCA+AGG | + | chr3.1:50430948-50430967 | MS.gene41568:CDS | 40.0% | |
| TGTGACGAAGATTCCATTTG+GGG | + | chr3.1:50431425-50431444 | MS.gene41568:CDS | 40.0% | |
| TTCTTCACTCTATGACATGC+TGG | + | chr3.1:50432143-50432162 | MS.gene41568:CDS | 40.0% | |
| ! | AGATCTAAAGAGCGCAAAAC+TGG | - | chr3.1:50427893-50427912 | None:intergenic | 40.0% |
| ! | CACCAGAAAAAGCTTTTGCA+AGG | - | chr3.1:50429789-50429808 | None:intergenic | 40.0% |
| ! | CCACCAATTTTCTTGACACA+TGG | - | chr3.1:50430984-50431003 | None:intergenic | 40.0% |
| ! | GATATTTTCTCATCAGGCAC+TGG | + | chr3.1:50431849-50431868 | MS.gene41568:CDS | 40.0% |
| ! | GCTTGCTGAAAACTTGTTCA+AGG | + | chr3.1:50428136-50428155 | MS.gene41568:intron | 40.0% |
| ! | GTTACCTTCGTGAATTTTGC+AGG | - | chr3.1:50429890-50429909 | None:intergenic | 40.0% |
| ! | GTTGGTCCAGTTTCTTTTCT+GGG | + | chr3.1:50428634-50428653 | MS.gene41568:CDS | 40.0% |
| ! | TCTTCCAATGGATTTCAGCT+TGG | - | chr3.1:50427630-50427649 | None:intergenic | 40.0% |
| ! | TGAATTTTGCAGGCCTTTAG+TGG | - | chr3.1:50429880-50429899 | None:intergenic | 40.0% |
| ! | TGCAAGCGAGTCAATTTTTC+AGG | - | chr3.1:50432264-50432283 | None:intergenic | 40.0% |
| ! | TGTTGGTCCAGTTTCTTTTC+TGG | + | chr3.1:50428633-50428652 | MS.gene41568:CDS | 40.0% |
| !! | AACTTCTGAAATGCCTGTAC+TGG | - | chr3.1:50427198-50427217 | None:intergenic | 40.0% |
| !! | ACGAGGTGCTGAAAATTCTA+AGG | + | chr3.1:50431098-50431117 | MS.gene41568:CDS | 40.0% |
| !! | CACCTTGCAAAAGCTTTTTC+TGG | + | chr3.1:50429784-50429803 | MS.gene41568:CDS | 40.0% |
| !! | CTTGCAAAAGCTTTTTCTGG+TGG | + | chr3.1:50429787-50429806 | MS.gene41568:CDS | 40.0% |
| !! | GCTGAGTTGAGGAACATTTT+TGG | + | chr3.1:50429700-50429719 | MS.gene41568:CDS | 40.0% |
| !! | GGGTTTGTTTTTCTGAGTGT+TGG | - | chr3.1:50431279-50431298 | None:intergenic | 40.0% |
| !! | GGTAATGGAATGAGAGAAGA+AGG | - | chr3.1:50425661-50425680 | None:intergenic | 40.0% |
| !! | TGGCGTTGATTTAGACAACA+TGG | + | chr3.1:50431782-50431801 | MS.gene41568:CDS | 40.0% |
| !! | TTGTTAATGCCTAGGTTGGT+AGG | + | chr3.1:50427017-50427036 | MS.gene41568:intron | 40.0% |
| !!! | GCTGAGGTAATTTTAGCTGA+TGG | + | chr3.1:50431579-50431598 | MS.gene41568:CDS | 40.0% |
| !!! | GTTGAGGAACATTTTTGGGT+TGG | + | chr3.1:50429705-50429724 | MS.gene41568:CDS | 40.0% |
| AAACTCACTCATTCAGGCTG+TGG | + | chr3.1:50431977-50431996 | MS.gene41568:CDS | 45.0% | |
| AAATTCACAGCCGCAACTTG+CGG | - | chr3.1:50425988-50426007 | None:intergenic | 45.0% | |
| AACCTAAACCTATCGGTCAC+AGG | - | chr3.1:50430428-50430447 | None:intergenic | 45.0% | |
| AACTTACACAGCTCTTGTGC+GGG | - | chr3.1:50428219-50428238 | None:intergenic | 45.0% | |
| AAGCAGATATTGAGCAACGC+AGG | + | chr3.1:50427077-50427096 | MS.gene41568:CDS | 45.0% | |
| AAGGCCTGCAAAATTCACGA+AGG | + | chr3.1:50429883-50429902 | MS.gene41568:CDS | 45.0% | |
| ACAGTTGACAAAGGCAAAGG+TGG | + | chr3.1:50431602-50431621 | MS.gene41568:CDS | 45.0% | |
| ACCCGAAGAATATGCTCAGA+AGG | + | chr3.1:50431659-50431678 | MS.gene41568:CDS | 45.0% | |
| ACTATCATGGGAATTGCCAG+AGG | + | chr3.1:50432194-50432213 | MS.gene41568:CDS | 45.0% | |
| AGAAAGCCTCGCCAATAGAT+TGG | - | chr3.1:50429158-50429177 | None:intergenic | 45.0% | |
| AGAGTAATTTCCGTCTGACC+AGG | - | chr3.1:50431333-50431352 | None:intergenic | 45.0% | |
| AGCAGATATTGAGCAACGCA+GGG | + | chr3.1:50427078-50427097 | MS.gene41568:CDS | 45.0% | |
| AGCTACTTCAACCTGAAACC+AGG | - | chr3.1:50427576-50427595 | None:intergenic | 45.0% | |
| ATACCTGTGAATCGGTGAAC+TGG | - | chr3.1:50427287-50427306 | None:intergenic | 45.0% | |
| ATGCTGTTATGTCACACTGC+AGG | + | chr3.1:50431041-50431060 | MS.gene41568:intron | 45.0% | |
| ATTCATGTAGCACCCCATGT+TGG | + | chr3.1:50428267-50428286 | MS.gene41568:intron | 45.0% | |
| ATTGAAACCGCAGTGACACA+AGG | + | chr3.1:50431720-50431739 | MS.gene41568:CDS | 45.0% | |
| CACTTTGGTTGTGACTGAGT+TGG | + | chr3.1:50431158-50431177 | MS.gene41568:CDS | 45.0% | |
| CATCTAGGCTCGAAATTAGG+TGG | + | chr3.1:50425880-50425899 | MS.gene41568:CDS | 45.0% | |
| CATGGAAGCGATTGAATCAG+GGG | + | chr3.1:50430852-50430871 | MS.gene41568:CDS | 45.0% | |
| CTGTCCTATCTCTTTCTGGA+AGG | - | chr3.1:50431365-50431384 | None:intergenic | 45.0% | |
| GAGGGAGTGAGAGTTTGAAA+CGG | - | chr3.1:50425720-50425739 | None:intergenic | 45.0% | |
| GATATCTGTGGCCGTTTGTT+TGG | + | chr3.1:50430271-50430290 | MS.gene41568:CDS | 45.0% | |
| GCTTCCAAGCTGAAATCCAT+TGG | + | chr3.1:50427623-50427642 | MS.gene41568:CDS | 45.0% | |
| GTATATCTCCTGTGACCGAT+AGG | + | chr3.1:50430417-50430436 | MS.gene41568:intron | 45.0% | |
| GTCATAGTGTTTGCCATGAG+AGG | + | chr3.1:50430542-50430561 | MS.gene41568:intron | 45.0% | |
| GTCATGGAAGCGATTGAATC+AGG | + | chr3.1:50430850-50430869 | MS.gene41568:CDS | 45.0% | |
| GTTAATCAAGACTGCAGTGG+AGG | + | chr3.1:50432341-50432360 | MS.gene41568:CDS | 45.0% | |
| GTTATGTCACACTGCAGGTA+AGG | + | chr3.1:50431046-50431065 | MS.gene41568:intron | 45.0% | |
| TAAAGATCAGCAAGCTCCTC+TGG | - | chr3.1:50432213-50432232 | None:intergenic | 45.0% | |
| TACTGCGCCTGCAATAACAA+CGG | - | chr3.1:50425848-50425867 | None:intergenic | 45.0% | |
| TCACTCACAGCCACTATCAT+GGG | + | chr3.1:50432182-50432201 | MS.gene41568:CDS | 45.0% | |
| TCAGCATCGTCTATCTGATC+AGG | + | chr3.1:50427976-50427995 | MS.gene41568:CDS | 45.0% | |
| TCAGGCTAAGGCTTGAAGTT+GGG | + | chr3.1:50427047-50427066 | MS.gene41568:CDS | 45.0% | |
| TCAGTACGAAAAGCAGCACA+TGG | + | chr3.1:50430904-50430923 | MS.gene41568:CDS | 45.0% | |
| TCCTCAACACACTGTTGAAG+CGG | + | chr3.1:50430240-50430259 | MS.gene41568:CDS | 45.0% | |
| TCTGGCAATTCCCATGATAG+TGG | - | chr3.1:50432195-50432214 | None:intergenic | 45.0% | |
| TCTTCGTCACATCACCAGTT+AGG | - | chr3.1:50431416-50431435 | None:intergenic | 45.0% | |
| TGCAGAAGCTTGCAGAAACT+AGG | + | chr3.1:50431949-50431968 | MS.gene41568:CDS | 45.0% | |
| TGCGTATGCTCTTAATGCCA+TGG | + | chr3.1:50425960-50425979 | MS.gene41568:CDS | 45.0% | |
| TGGACAGTTGACAAAGGCAA+AGG | + | chr3.1:50431599-50431618 | MS.gene41568:CDS | 45.0% | |
| TGGATGAAGAGGGTGGTAAA+GGG | - | chr3.1:50425687-50425706 | None:intergenic | 45.0% | |
| TGGTGTGAAAAAGGAGGATG+AGG | + | chr3.1:50426580-50426599 | MS.gene41568:CDS | 45.0% | |
| TTCACTCACAGCCACTATCA+TGG | + | chr3.1:50432181-50432200 | MS.gene41568:CDS | 45.0% | |
| TTCAGGCTAAGGCTTGAAGT+TGG | + | chr3.1:50427046-50427065 | MS.gene41568:CDS | 45.0% | |
| ! | AATCAGCTTGGTGGGATTCT+CGG | + | chr3.1:50431492-50431511 | MS.gene41568:CDS | 45.0% |
| ! | AGCTGATGGACAGTTGACAA+AGG | + | chr3.1:50431593-50431612 | MS.gene41568:CDS | 45.0% |
| ! | AGCTTTTAGGCAACAAGCTG+AGG | + | chr3.1:50431563-50431582 | MS.gene41568:CDS | 45.0% |
| ! | GTCTTGCTGAGCAAGCTTTT+AGG | + | chr3.1:50431550-50431569 | MS.gene41568:CDS | 45.0% |
| ! | TAAATGGGTGCATGGGCTTT+TGG | - | chr3.1:50430345-50430364 | None:intergenic | 45.0% |
| ! | TCACCAACTGCTGAAGCTTT+TGG | - | chr3.1:50430156-50430175 | None:intergenic | 45.0% |
| ! | TCAGCTTGGAAGCATACAAC+CGG | - | chr3.1:50427616-50427635 | None:intergenic | 45.0% |
| ! | TGTCGTTTGGTGGATGAAGA+GGG | - | chr3.1:50425697-50425716 | None:intergenic | 45.0% |
| ! | TTCGACGACGTTTTCGATTC+CGG | - | chr3.1:50425791-50425810 | None:intergenic | 45.0% |
| ! | TTGGTGACTAATGGAGAGCT+TGG | + | chr3.1:50430169-50430188 | MS.gene41568:CDS | 45.0% |
| ! | TTGTGTCACTGCGGTTTCAA+TGG | - | chr3.1:50431721-50431740 | None:intergenic | 45.0% |
| !! | CTTCAGCAGTTGGTGACTAA+TGG | + | chr3.1:50430160-50430179 | MS.gene41568:CDS | 45.0% |
| !! | GAAGGTGTGAGAGTTGATGA+AGG | - | chr3.1:50425643-50425662 | None:intergenic | 45.0% |
| !! | GAGTTTGAAACGGTGTCGTT+TGG | - | chr3.1:50425710-50425729 | None:intergenic | 45.0% |
| !! | TTCAATGGCAGCTGCCATTT+TGG | - | chr3.1:50431706-50431725 | None:intergenic | 45.0% |
| !! | TTTCCAGTTCACCGATTCAC+AGG | + | chr3.1:50427281-50427300 | MS.gene41568:CDS | 45.0% |
| !! | TTTGAAACGGTGTCGTTTGG+TGG | - | chr3.1:50425707-50425726 | None:intergenic | 45.0% |
| !!! | CGAGTCAATTTTTCAGGAGC+TGG | - | chr3.1:50432258-50432277 | None:intergenic | 45.0% |
| !!! | TTTTGGGTTGGGTAAACGTG+AGG | + | chr3.1:50429717-50429736 | MS.gene41568:CDS | 45.0% |
| AAACCGCAGTGACACAAGGA+CGG | + | chr3.1:50431724-50431743 | MS.gene41568:CDS | 50.0% | |
| ACTCGCTTGCAGCATCTGTT+GGG | + | chr3.1:50432273-50432292 | MS.gene41568:CDS | 50.0% | |
| AGTCGAAATGCTGCTGTTGG+AGG | + | chr3.1:50425904-50425923 | MS.gene41568:CDS | 50.0% | |
| CAAAGAGATCGACATCCGCA+TGG | - | chr3.1:50428606-50428625 | None:intergenic | 50.0% | |
| CAGGCTAAGGCTTGAAGTTG+GGG | + | chr3.1:50427048-50427067 | MS.gene41568:CDS | 50.0% | |
| CTATACGTGACAATGCCCAC+CGG | + | chr3.1:50427594-50427613 | MS.gene41568:CDS | 50.0% | |
| CTCCTGTGACCGATAGGTTT+AGG | + | chr3.1:50430423-50430442 | MS.gene41568:intron | 50.0% | |
| CTGTGGCCGTTTGTTTGGAA+AGG | + | chr3.1:50430276-50430295 | MS.gene41568:CDS | 50.0% | |
| GAAGAGGGTGGTAAAGGGAA+GGG | - | chr3.1:50425682-50425701 | None:intergenic | 50.0% | |
| GATCTCTTTGCTCGAGGTGT+TGG | + | chr3.1:50428616-50428635 | MS.gene41568:CDS | 50.0% | |
| GATGTCGATCTCTTTGCTCG+AGG | + | chr3.1:50428610-50428629 | MS.gene41568:CDS | 50.0% | |
| GCGATTGAATCAGGGGTTGA+TGG | + | chr3.1:50430859-50430878 | MS.gene41568:CDS | 50.0% | |
| GCGGCTCATTCAGATATCTG+TGG | + | chr3.1:50430259-50430278 | MS.gene41568:CDS | 50.0% | |
| GGAAGTCGAAATGCTGCTGT+TGG | + | chr3.1:50425901-50425920 | MS.gene41568:CDS | 50.0% | |
| GGTGGTAAAGGGAAGGGTAA+TGG | - | chr3.1:50425676-50425695 | None:intergenic | 50.0% | |
| GTCGAAATGCTGCTGTTGGA+GGG | + | chr3.1:50425905-50425924 | MS.gene41568:CDS | 50.0% | |
| GTGGATGAAGAGGGTGGTAA+AGG | - | chr3.1:50425688-50425707 | None:intergenic | 50.0% | |
| GTTACAAATGCTTTGGCCGG+TGG | + | chr3.1:50428819-50428838 | MS.gene41568:CDS | 50.0% | |
| TCGAAATGCTGCTGTTGGAG+GGG | + | chr3.1:50425906-50425925 | MS.gene41568:CDS | 50.0% | |
| TCGATTCCGGTGAGGTCTTT+GGG | - | chr3.1:50425778-50425797 | None:intergenic | 50.0% | |
| TCTACTGCTTCGCTAACTCC+AGG | - | chr3.1:50428532-50428551 | None:intergenic | 50.0% | |
| TGAAGAGGGTGGTAAAGGGA+AGG | - | chr3.1:50425683-50425702 | None:intergenic | 50.0% | |
| TGAGGAACTTCAAGGTGACG+AGG | + | chr3.1:50426826-50426845 | MS.gene41568:CDS | 50.0% | |
| TGTTATTGCAGGCGCAGTAG+CGG | + | chr3.1:50425849-50425868 | MS.gene41568:CDS | 50.0% | |
| TTCAAGGTGACGAGGCTGAT+AGG | + | chr3.1:50426834-50426853 | MS.gene41568:CDS | 50.0% | |
| TTCCTCAACTCAGCTAGTGC+AGG | - | chr3.1:50429694-50429713 | None:intergenic | 50.0% | |
| TTCCTGCACTAGCTGAGTTG+AGG | + | chr3.1:50429689-50429708 | MS.gene41568:CDS | 50.0% | |
| TTCGATTCCGGTGAGGTCTT+TGG | - | chr3.1:50425779-50425798 | None:intergenic | 50.0% | |
| ! | ACATCCGCCGTTGTTATTGC+AGG | + | chr3.1:50425838-50425857 | MS.gene41568:CDS | 50.0% |
| ! | CCAACTGCTGAAGCTTTTGG+CGG | - | chr3.1:50430153-50430172 | None:intergenic | 50.0% |
| ! | CTCTTCGCGAGTTGGGATAT+AGG | + | chr3.1:50432319-50432338 | MS.gene41568:CDS | 50.0% |
| ! | CTTGGAAGCATACAACCGGT+GGG | - | chr3.1:50427612-50427631 | None:intergenic | 50.0% |
| ! | GACTAATGGAGAGCTTGGTG+AGG | + | chr3.1:50430174-50430193 | MS.gene41568:CDS | 50.0% |
| ! | TAATGGAGAGCTTGGTGAGG+AGG | + | chr3.1:50430177-50430196 | MS.gene41568:CDS | 50.0% |
| !! | GTGTCGTTTGGTGGATGAAG+AGG | - | chr3.1:50425698-50425717 | None:intergenic | 50.0% |
| AAATGCTGCTGTTGGAGGGG+CGG | + | chr3.1:50425909-50425928 | MS.gene41568:CDS | 55.0% | |
| AATGGGGAAGCCTGGTCAGA+CGG | + | chr3.1:50431320-50431339 | MS.gene41568:CDS | 55.0% | |
| AGGAGGAGGATGAAGAGCGA+GGG | - | chr3.1:50425738-50425757 | None:intergenic | 55.0% | |
| ATTCCGGTGAGGTCTTTGGG+CGG | - | chr3.1:50425775-50425794 | None:intergenic | 55.0% | |
| CCGCCAAAAGCTTCAGCAGT+TGG | + | chr3.1:50430150-50430169 | MS.gene41568:CDS | 55.0% | |
| GACTCGCTTGCAGCATCTGT+TGG | + | chr3.1:50432272-50432291 | MS.gene41568:CDS | 55.0% | |
| GCCGCTTCAACAGTGTGTTG+AGG | - | chr3.1:50430244-50430263 | None:intergenic | 55.0% | |
| GTAGCGGCGGGATTTCATCT+AGG | + | chr3.1:50425865-50425884 | MS.gene41568:CDS | 55.0% | |
| TGCGCCTGCAATAACAACGG+CGG | - | chr3.1:50425845-50425864 | None:intergenic | 55.0% | |
| TTAGTGATCCGGGCCCCAAA+TGG | - | chr3.1:50431441-50431460 | None:intergenic | 55.0% | |
| ! | CGAAGATTCCATTTGGGGCC+CGG | + | chr3.1:50431430-50431449 | MS.gene41568:CDS | 55.0% |
| ! | CGACGTTTTCGATTCCGGTG+AGG | - | chr3.1:50425786-50425805 | None:intergenic | 55.0% |
| ! | CGTTTGGTGGATGAAGAGGG+TGG | - | chr3.1:50425694-50425713 | None:intergenic | 55.0% |
| ! | GCTTGGAAGCATACAACCGG+TGG | - | chr3.1:50427613-50427632 | None:intergenic | 55.0% |
| ! | GGTGGGATTCTCGGTTTGAG+TGG | + | chr3.1:50431501-50431520 | MS.gene41568:CDS | 55.0% |
| !! | GCTTCTAGGAAGCGTCACAG+GGG | + | chr3.1:50430502-50430521 | MS.gene41568:intron | 55.0% |
| !! | GGCTTCTAGGAAGCGTCACA+GGG | + | chr3.1:50430501-50430520 | MS.gene41568:intron | 55.0% |
| !! | TGGCTTCTAGGAAGCGTCAC+AGG | + | chr3.1:50430500-50430519 | MS.gene41568:intron | 55.0% |
| AGCAGCTGCTCTTCGCGAGT+TGG | + | chr3.1:50432311-50432330 | MS.gene41568:CDS | 60.0% | |
| CAACGGCGGATGTAGCGAGA+CGG | - | chr3.1:50425831-50425850 | None:intergenic | 60.0% | |
| CACTGGAGAGTTCGACGAGG+AGG | + | chr3.1:50431866-50431885 | MS.gene41568:CDS | 60.0% | |
| CCTGGCGGTGAGGAACTTCA+AGG | + | chr3.1:50426818-50426837 | MS.gene41568:CDS | 60.0% | |
| CCTTGAAGTTCCTCACCGCC+AGG | - | chr3.1:50426821-50426840 | None:intergenic | 60.0% | |
| GAGGAGGAGGATGAAGAGCG+AGG | - | chr3.1:50425739-50425758 | None:intergenic | 60.0% | |
| GAGGTCTTTGGGCGGAGGAA+GGG | - | chr3.1:50425767-50425786 | None:intergenic | 60.0% | |
| GATGTAGCGAGACGGAGTGG+CGG | - | chr3.1:50425823-50425842 | None:intergenic | 60.0% | |
| GCAGCTGCTCTTCGCGAGTT+GGG | + | chr3.1:50432312-50432331 | MS.gene41568:CDS | 60.0% | |
| GGCACAGGTGGCCAGTATGA+TGG | + | chr3.1:50428753-50428772 | MS.gene41568:intron | 60.0% | |
| GGGCCCGGATCACTAACAAG+AGG | + | chr3.1:50431445-50431464 | MS.gene41568:CDS | 60.0% | |
| GTGTCGTCTGTGCTTCCTCC+TGG | + | chr3.1:50426800-50426819 | MS.gene41568:CDS | 60.0% | |
| TATTGCAGGCGCAGTAGCGG+CGG | + | chr3.1:50425852-50425871 | MS.gene41568:CDS | 60.0% | |
| TCGTCTGTGCTTCCTCCTGG+CGG | + | chr3.1:50426803-50426822 | MS.gene41568:CDS | 60.0% | |
| TGAAGTTCCTCACCGCCAGG+AGG | - | chr3.1:50426818-50426837 | None:intergenic | 60.0% | |
| TGAGGTCTTTGGGCGGAGGA+AGG | - | chr3.1:50425768-50425787 | None:intergenic | 60.0% | |
| TGCTTTGGCCGGTGGTCGTA+TGG | + | chr3.1:50428827-50428846 | MS.gene41568:CDS | 60.0% | |
| ! | CAGCCGTCCTTGTGTCACTG+CGG | - | chr3.1:50431730-50431749 | None:intergenic | 60.0% |
| ! | GTTGGAGGGGCGGTTGCTTT+CGG | + | chr3.1:50425919-50425938 | MS.gene41568:CDS | 60.0% |
| ! | TTGGAGGGGCGGTTGCTTTC+GGG | + | chr3.1:50425920-50425939 | MS.gene41568:CDS | 60.0% |
| !! | AGGCACTGGAGAGTTCGACG+AGG | + | chr3.1:50431863-50431882 | MS.gene41568:CDS | 60.0% |
| AGGAAGGGAGGAGGAGGAGG+AGG | - | chr3.1:50425752-50425771 | None:intergenic | 65.0% | |
| ATTGCAGGCGCAGTAGCGGC+GGG | + | chr3.1:50425853-50425872 | MS.gene41568:CDS | 65.0% | |
| CCTCCGCCCAAAGACCTCAC+CGG | + | chr3.1:50425769-50425788 | MS.gene41568:CDS | 65.0% | |
| CTCGCGAAGAGCAGCTGCTG+TGG | - | chr3.1:50432310-50432329 | None:intergenic | 65.0% | |
| GCGGATGTAGCGAGACGGAG+TGG | - | chr3.1:50425826-50425845 | None:intergenic | 65.0% | |
| GTCTTTGGGCGGAGGAAGGG+AGG | - | chr3.1:50425764-50425783 | None:intergenic | 65.0% | |
| TGCCATGGCGCCGCAAGTTG+CGG | + | chr3.1:50425975-50425994 | MS.gene41568:CDS | 65.0% | |
| TGTGCTTCCTCCTGGCGGTG+AGG | + | chr3.1:50426808-50426827 | MS.gene41568:CDS | 65.0% | |
| TTTGGGCGGAGGAAGGGAGG+AGG | - | chr3.1:50425761-50425780 | None:intergenic | 65.0% | |
| ! | GTTGCTTTCGGGGTGGCTGG+TGG | + | chr3.1:50425931-50425950 | MS.gene41568:CDS | 65.0% |
| ! | TGGAGGGGCGGTTGCTTTCG+GGG | + | chr3.1:50425921-50425940 | MS.gene41568:CDS | 65.0% |
| ! | TTTCGGGGTGGCTGGTGGTG+CGG | + | chr3.1:50425936-50425955 | MS.gene41568:CDS | 65.0% |
| AGCCGCAACTTGCGGCGCCA+TGG | - | chr3.1:50425980-50425999 | None:intergenic | 70.0% | |
| CCGGTGAGGTCTTTGGGCGG+AGG | - | chr3.1:50425772-50425791 | None:intergenic | 70.0% | |
| CGGAGGAAGGGAGGAGGAGG+AGG | - | chr3.1:50425755-50425774 | None:intergenic | 70.0% | |
| ! | AGGGGCGGTTGCTTTCGGGG+TGG | + | chr3.1:50425924-50425943 | MS.gene41568:CDS | 70.0% |
| ! | GCGGTTGCTTTCGGGGTGGC+TGG | + | chr3.1:50425928-50425947 | MS.gene41568:CDS | 70.0% |
| GGGCGGAGGAAGGGAGGAGG+AGG | - | chr3.1:50425758-50425777 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 50425634 | 50432383 | 50425634 | ID=MS.gene41568 |
| chr3.1 | mRNA | 50425634 | 50432383 | 50425634 | ID=MS.gene41568.t1;Parent=MS.gene41568 |
| chr3.1 | exon | 50425634 | 50426079 | 50425634 | ID=MS.gene41568.t1.exon1;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50425634 | 50426079 | 50425634 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50426577 | 50426636 | 50426577 | ID=MS.gene41568.t1.exon2;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50426577 | 50426636 | 50426577 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50426796 | 50426919 | 50426796 | ID=MS.gene41568.t1.exon3;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50426796 | 50426919 | 50426796 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50427031 | 50427099 | 50427031 | ID=MS.gene41568.t1.exon4;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50427031 | 50427099 | 50427031 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50427204 | 50427302 | 50427204 | ID=MS.gene41568.t1.exon5;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50427204 | 50427302 | 50427204 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50427584 | 50427650 | 50427584 | ID=MS.gene41568.t1.exon6;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50427584 | 50427650 | 50427584 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50427933 | 50427997 | 50427933 | ID=MS.gene41568.t1.exon7;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50427933 | 50427997 | 50427933 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50428137 | 50428231 | 50428137 | ID=MS.gene41568.t1.exon8;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50428137 | 50428231 | 50428137 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50428528 | 50428655 | 50428528 | ID=MS.gene41568.t1.exon9;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50428528 | 50428655 | 50428528 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50428760 | 50428860 | 50428760 | ID=MS.gene41568.t1.exon10;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50428760 | 50428860 | 50428760 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50429688 | 50429904 | 50429688 | ID=MS.gene41568.t1.exon11;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50429688 | 50429904 | 50429688 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50430143 | 50430297 | 50430143 | ID=MS.gene41568.t1.exon12;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50430143 | 50430297 | 50430143 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50430847 | 50430972 | 50430847 | ID=MS.gene41568.t1.exon13;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50430847 | 50430972 | 50430847 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50431063 | 50432031 | 50431063 | ID=MS.gene41568.t1.exon14;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50431063 | 50432031 | 50431063 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| chr3.1 | exon | 50432141 | 50432383 | 50432141 | ID=MS.gene41568.t1.exon15;Parent=MS.gene41568.t1 |
| chr3.1 | CDS | 50432141 | 50432383 | 50432141 | ID=cds.MS.gene41568.t1;Parent=MS.gene41568.t1 |
| Gene Sequence |
| Protein sequence |
