Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41702.t1 | XP_003624592.1 | 98.5 | 340 | 5 | 0 | 1 | 340 | 1 | 340 | 1.30E-189 | 672.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41702.t1 | Q84TD6 | 49.6 | 369 | 139 | 11 | 4 | 340 | 6 | 359 | 9.4e-80 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41702.t1 | G7KZD3 | 98.5 | 340 | 5 | 0 | 1 | 340 | 1 | 340 | 9.4e-190 | 672.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene41702.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055150 | MS.gene41702 | 0.805339 | 1.40E-49 | -1.69E-46 |
| MS.gene059867 | MS.gene41702 | 0.809719 | 1.65E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41702.t1 | MTR_7g085220 | 98.824 | 340 | 4 | 0 | 1 | 340 | 1 | 340 | 0.0 | 703 |
| MS.gene41702.t1 | MTR_2g080010 | 67.172 | 198 | 46 | 5 | 2 | 187 | 9 | 199 | 1.89e-91 | 277 |
| MS.gene41702.t1 | MTR_2157s0010 | 60.759 | 237 | 59 | 5 | 8 | 238 | 8 | 216 | 1.00e-88 | 267 |
| MS.gene41702.t1 | MTR_4g089135 | 64.211 | 190 | 42 | 3 | 3 | 173 | 10 | 192 | 4.78e-84 | 258 |
| MS.gene41702.t1 | MTR_5g041940 | 54.202 | 238 | 85 | 5 | 8 | 244 | 3 | 217 | 3.80e-80 | 245 |
| MS.gene41702.t1 | MTR_7g100990 | 50.763 | 262 | 96 | 7 | 5 | 265 | 8 | 237 | 1.79e-79 | 246 |
| MS.gene41702.t1 | MTR_4g081870 | 55.310 | 226 | 80 | 5 | 6 | 231 | 7 | 211 | 7.01e-79 | 242 |
| MS.gene41702.t1 | MTR_2g093810 | 65.714 | 175 | 51 | 3 | 8 | 181 | 14 | 180 | 1.23e-78 | 243 |
| MS.gene41702.t1 | MTR_3g088110 | 61.497 | 187 | 60 | 3 | 5 | 191 | 4 | 178 | 1.98e-78 | 242 |
| MS.gene41702.t1 | MTR_8g094580 | 58.564 | 181 | 65 | 1 | 8 | 188 | 7 | 177 | 1.86e-73 | 229 |
| MS.gene41702.t1 | MTR_2g079990 | 63.314 | 169 | 49 | 3 | 5 | 173 | 13 | 168 | 4.53e-73 | 230 |
| MS.gene41702.t1 | MTR_8g059170 | 63.429 | 175 | 47 | 4 | 1 | 169 | 1 | 164 | 8.67e-73 | 229 |
| MS.gene41702.t1 | MTR_2g079990 | 56.995 | 193 | 50 | 4 | 5 | 173 | 13 | 196 | 2.34e-69 | 221 |
| MS.gene41702.t1 | MTR_3g096920 | 61.212 | 165 | 53 | 2 | 5 | 169 | 4 | 157 | 5.17e-68 | 215 |
| MS.gene41702.t1 | MTR_3g096920 | 49.751 | 201 | 55 | 2 | 5 | 169 | 4 | 194 | 9.62e-62 | 200 |
| MS.gene41702.t1 | MTR_5g040420 | 43.396 | 265 | 127 | 6 | 10 | 260 | 16 | 271 | 2.58e-61 | 201 |
| MS.gene41702.t1 | MTR_2g064090 | 49.231 | 195 | 78 | 5 | 8 | 200 | 6 | 181 | 1.99e-59 | 195 |
| MS.gene41702.t1 | MTR_6g011860 | 55.030 | 169 | 63 | 4 | 7 | 170 | 14 | 174 | 2.21e-59 | 196 |
| MS.gene41702.t1 | MTR_3g435150 | 38.816 | 304 | 153 | 6 | 5 | 291 | 13 | 300 | 4.01e-59 | 192 |
| MS.gene41702.t1 | MTR_6g084430 | 55.422 | 166 | 59 | 3 | 5 | 170 | 2 | 152 | 4.34e-59 | 193 |
| MS.gene41702.t1 | MTR_6g012670 | 52.410 | 166 | 68 | 2 | 8 | 173 | 20 | 174 | 9.35e-59 | 192 |
| MS.gene41702.t1 | MTR_8g467490 | 54.217 | 166 | 64 | 4 | 10 | 170 | 16 | 174 | 2.44e-58 | 193 |
| MS.gene41702.t1 | MTR_7g085260 | 52.874 | 174 | 66 | 4 | 2 | 170 | 10 | 172 | 2.92e-57 | 190 |
| MS.gene41702.t1 | MTR_7g005280 | 51.705 | 176 | 65 | 4 | 5 | 178 | 12 | 169 | 3.36e-57 | 186 |
| MS.gene41702.t1 | MTR_4g108760 | 53.614 | 166 | 66 | 3 | 5 | 170 | 14 | 168 | 6.47e-57 | 189 |
| MS.gene41702.t1 | MTR_4g036030 | 49.701 | 167 | 66 | 3 | 6 | 169 | 5 | 156 | 2.55e-55 | 184 |
| MS.gene41702.t1 | MTR_6g477900 | 44.271 | 192 | 81 | 4 | 6 | 184 | 4 | 182 | 2.88e-55 | 181 |
| MS.gene41702.t1 | MTR_2g078700 | 53.333 | 165 | 68 | 2 | 6 | 170 | 21 | 176 | 4.85e-55 | 184 |
| MS.gene41702.t1 | MTR_5g012080 | 49.102 | 167 | 69 | 3 | 6 | 169 | 5 | 158 | 5.29e-55 | 183 |
| MS.gene41702.t1 | MTR_4g035590 | 47.027 | 185 | 79 | 3 | 1 | 182 | 1 | 169 | 6.84e-55 | 183 |
| MS.gene41702.t1 | MTR_1g008740 | 49.457 | 184 | 74 | 4 | 8 | 187 | 13 | 181 | 7.18e-55 | 183 |
| MS.gene41702.t1 | MTR_1g008740 | 49.457 | 184 | 74 | 4 | 8 | 187 | 27 | 195 | 8.84e-55 | 183 |
| MS.gene41702.t1 | MTR_3g109340 | 50.296 | 169 | 72 | 2 | 2 | 170 | 16 | 172 | 1.28e-54 | 182 |
| MS.gene41702.t1 | MTR_3g109340 | 50.292 | 171 | 68 | 3 | 2 | 170 | 16 | 171 | 2.74e-54 | 182 |
| MS.gene41702.t1 | MTR_2g062730 | 47.368 | 171 | 73 | 3 | 2 | 169 | 4 | 160 | 6.90e-54 | 180 |
| MS.gene41702.t1 | MTR_5g021710 | 46.196 | 184 | 79 | 4 | 1 | 180 | 1 | 168 | 7.86e-54 | 180 |
| MS.gene41702.t1 | MTR_5g076850 | 50.877 | 171 | 69 | 3 | 6 | 174 | 4 | 161 | 1.00e-53 | 187 |
| MS.gene41702.t1 | MTR_4g101680 | 47.904 | 167 | 69 | 3 | 6 | 169 | 5 | 156 | 2.80e-53 | 179 |
| MS.gene41702.t1 | MTR_8g076110 | 47.059 | 170 | 68 | 4 | 5 | 169 | 3 | 155 | 4.64e-53 | 177 |
| MS.gene41702.t1 | MTR_1g069805 | 42.857 | 203 | 89 | 3 | 8 | 210 | 10 | 185 | 5.40e-53 | 176 |
| MS.gene41702.t1 | MTR_3g064580 | 52.663 | 169 | 62 | 4 | 6 | 170 | 4 | 158 | 2.43e-52 | 183 |
| MS.gene41702.t1 | MTR_3g070030 | 49.133 | 173 | 78 | 2 | 1 | 173 | 12 | 174 | 2.75e-52 | 176 |
| MS.gene41702.t1 | MTR_5g090970 | 49.091 | 165 | 73 | 2 | 10 | 169 | 20 | 178 | 2.97e-52 | 175 |
| MS.gene41702.t1 | MTR_6g032770 | 47.753 | 178 | 84 | 3 | 7 | 184 | 17 | 185 | 7.72e-52 | 176 |
| MS.gene41702.t1 | MTR_5g014300 | 47.647 | 170 | 78 | 4 | 6 | 173 | 4 | 164 | 2.00e-51 | 174 |
| MS.gene41702.t1 | MTR_8g024480 | 47.977 | 173 | 73 | 4 | 5 | 169 | 12 | 175 | 3.91e-51 | 176 |
| MS.gene41702.t1 | MTR_1g096430 | 48.193 | 166 | 66 | 4 | 8 | 169 | 7 | 156 | 4.24e-51 | 173 |
| MS.gene41702.t1 | MTR_2g064470 | 46.707 | 167 | 75 | 3 | 5 | 171 | 8 | 160 | 6.39e-51 | 171 |
| MS.gene41702.t1 | MTR_5g090970 | 49.091 | 165 | 72 | 3 | 10 | 169 | 20 | 177 | 7.82e-51 | 171 |
| MS.gene41702.t1 | MTR_4g134460 | 50.920 | 163 | 62 | 3 | 10 | 170 | 56 | 202 | 1.01e-50 | 174 |
| MS.gene41702.t1 | MTR_2g068880 | 47.337 | 169 | 76 | 3 | 10 | 170 | 24 | 187 | 1.50e-50 | 171 |
| MS.gene41702.t1 | MTR_4g098630 | 45.856 | 181 | 82 | 4 | 8 | 182 | 6 | 176 | 3.27e-49 | 167 |
| MS.gene41702.t1 | MTR_7g097090 | 48.125 | 160 | 68 | 3 | 8 | 167 | 10 | 154 | 3.35e-49 | 166 |
| MS.gene41702.t1 | MTR_8g099750 | 46.774 | 186 | 79 | 6 | 6 | 183 | 12 | 185 | 3.77e-49 | 164 |
| MS.gene41702.t1 | MTR_2g068920 | 47.337 | 169 | 76 | 3 | 10 | 170 | 23 | 186 | 1.75e-48 | 165 |
| MS.gene41702.t1 | MTR_3g098810 | 49.405 | 168 | 76 | 3 | 6 | 171 | 12 | 172 | 1.91e-48 | 163 |
| MS.gene41702.t1 | MTR_7g011130 | 44.565 | 184 | 82 | 2 | 1 | 173 | 12 | 186 | 1.83e-47 | 164 |
| MS.gene41702.t1 | MTR_4g075980 | 37.692 | 260 | 137 | 5 | 1 | 251 | 9 | 252 | 3.51e-47 | 161 |
| MS.gene41702.t1 | MTR_3g096140 | 43.827 | 162 | 76 | 3 | 10 | 169 | 9 | 157 | 1.15e-46 | 159 |
| MS.gene41702.t1 | MTR_8g094580 | 55.639 | 133 | 49 | 1 | 57 | 189 | 2 | 124 | 1.92e-46 | 157 |
| MS.gene41702.t1 | MTR_3g116070 | 53.237 | 139 | 57 | 2 | 5 | 142 | 20 | 151 | 1.98e-46 | 161 |
| MS.gene41702.t1 | MTR_3g096140 | 43.827 | 162 | 76 | 3 | 10 | 169 | 9 | 157 | 7.23e-46 | 160 |
| MS.gene41702.t1 | MTR_7g011120 | 43.956 | 182 | 80 | 3 | 1 | 173 | 1 | 169 | 7.60e-46 | 158 |
| MS.gene41702.t1 | MTR_5g069030 | 46.961 | 181 | 73 | 4 | 8 | 182 | 25 | 188 | 1.88e-45 | 164 |
| MS.gene41702.t1 | MTR_2g086880 | 40.000 | 205 | 99 | 6 | 1 | 202 | 11 | 194 | 5.54e-44 | 158 |
| MS.gene41702.t1 | MTR_1g090723 | 39.024 | 205 | 106 | 5 | 10 | 211 | 10 | 198 | 6.67e-44 | 160 |
| MS.gene41702.t1 | MTR_2g086880 | 40.000 | 205 | 99 | 6 | 1 | 202 | 11 | 194 | 7.70e-44 | 159 |
| MS.gene41702.t1 | MTR_1g090720 | 47.024 | 168 | 76 | 3 | 6 | 169 | 40 | 198 | 1.07e-43 | 157 |
| MS.gene41702.t1 | MTR_1g097300 | 45.399 | 163 | 74 | 4 | 10 | 170 | 21 | 170 | 1.33e-43 | 158 |
| MS.gene41702.t1 | MTR_3g098810 | 54.348 | 138 | 56 | 2 | 6 | 143 | 12 | 142 | 1.43e-43 | 148 |
| MS.gene41702.t1 | MTR_3g093050 | 40.000 | 240 | 110 | 7 | 8 | 231 | 22 | 243 | 2.29e-43 | 158 |
| MS.gene41702.t1 | MTR_3g093050 | 40.000 | 240 | 110 | 7 | 8 | 231 | 22 | 243 | 3.33e-43 | 157 |
| MS.gene41702.t1 | MTR_3g093040 | 40.580 | 207 | 105 | 4 | 7 | 211 | 107 | 297 | 1.13e-42 | 150 |
| MS.gene41702.t1 | MTR_1g090723 | 39.024 | 205 | 105 | 6 | 10 | 211 | 10 | 197 | 1.35e-42 | 156 |
| MS.gene41702.t1 | MTR_1g090723 | 39.024 | 205 | 105 | 6 | 10 | 211 | 10 | 197 | 1.39e-42 | 155 |
| MS.gene41702.t1 | MTR_8g063550 | 42.683 | 164 | 79 | 3 | 8 | 169 | 6 | 156 | 7.33e-42 | 149 |
| MS.gene41702.t1 | MTR_0036s0150 | 39.336 | 211 | 103 | 7 | 10 | 217 | 7 | 195 | 1.00e-41 | 152 |
| MS.gene41702.t1 | MTR_8g063550 | 42.105 | 171 | 82 | 4 | 1 | 169 | 1 | 156 | 1.32e-41 | 150 |
| MS.gene41702.t1 | MTR_8g063550 | 42.683 | 164 | 79 | 3 | 8 | 169 | 6 | 156 | 2.31e-41 | 150 |
| MS.gene41702.t1 | MTR_8g023840 | 44.578 | 166 | 66 | 6 | 7 | 166 | 10 | 155 | 1.49e-39 | 144 |
| MS.gene41702.t1 | MTR_3g070040 | 42.197 | 173 | 88 | 2 | 1 | 173 | 1 | 161 | 3.73e-39 | 141 |
| MS.gene41702.t1 | MTR_8g093580 | 41.463 | 164 | 81 | 3 | 8 | 169 | 6 | 156 | 8.73e-39 | 144 |
| MS.gene41702.t1 | MTR_3g096140 | 40.268 | 149 | 74 | 3 | 23 | 169 | 1 | 136 | 1.30e-35 | 132 |
| MS.gene41702.t1 | MTR_8g023900 | 39.560 | 182 | 90 | 7 | 8 | 186 | 12 | 176 | 8.15e-35 | 132 |
| MS.gene41702.t1 | MTR_8g023900 | 39.665 | 179 | 86 | 7 | 11 | 186 | 196 | 355 | 4.37e-32 | 125 |
| MS.gene41702.t1 | MTR_4g052620 | 40.719 | 167 | 81 | 5 | 8 | 167 | 5 | 160 | 1.01e-34 | 128 |
| MS.gene41702.t1 | MTR_7g105170 | 32.932 | 249 | 138 | 8 | 7 | 234 | 3 | 243 | 1.19e-33 | 125 |
| MS.gene41702.t1 | MTR_8g023860 | 40.606 | 165 | 74 | 6 | 7 | 166 | 11 | 156 | 1.70e-33 | 128 |
| MS.gene41702.t1 | MTR_2g086690 | 36.408 | 206 | 99 | 8 | 9 | 199 | 5 | 193 | 2.00e-32 | 121 |
| MS.gene41702.t1 | MTR_4g094302 | 36.747 | 166 | 88 | 3 | 8 | 171 | 11 | 161 | 3.26e-32 | 119 |
| MS.gene41702.t1 | MTR_8g023930 | 36.757 | 185 | 91 | 7 | 8 | 187 | 24 | 187 | 3.82e-32 | 125 |
| MS.gene41702.t1 | MTR_4g094302 | 40.000 | 135 | 66 | 2 | 8 | 142 | 11 | 130 | 5.62e-30 | 112 |
| MS.gene41702.t1 | MTR_8g093790 | 37.791 | 172 | 73 | 7 | 1 | 171 | 2 | 140 | 4.94e-26 | 102 |
| MS.gene41702.t1 | MTR_8g023880 | 37.017 | 181 | 76 | 7 | 6 | 169 | 5 | 164 | 8.72e-26 | 104 |
| MS.gene41702.t1 | MTR_7g070140 | 51.220 | 82 | 33 | 1 | 61 | 142 | 17 | 91 | 2.36e-22 | 91.7 |
| MS.gene41702.t1 | MTR_7g083360 | 31.690 | 142 | 84 | 4 | 1 | 140 | 3 | 133 | 6.82e-20 | 85.5 |
| MS.gene41702.t1 | MTR_3g096400 | 34.104 | 173 | 89 | 8 | 8 | 171 | 7 | 163 | 7.70e-20 | 86.7 |
| MS.gene41702.t1 | MTR_7g083370 | 32.168 | 143 | 82 | 5 | 7 | 146 | 9 | 139 | 4.19e-19 | 82.8 |
| MS.gene41702.t1 | MTR_7g083330 | 32.593 | 135 | 78 | 4 | 8 | 140 | 18 | 141 | 1.05e-17 | 80.5 |
| MS.gene41702.t1 | MTR_7g070150 | 43.421 | 76 | 31 | 3 | 113 | 184 | 8 | 75 | 1.03e-14 | 69.3 |
| MS.gene41702.t1 | MTR_7g116460 | 30.120 | 166 | 94 | 7 | 14 | 172 | 11 | 161 | 8.46e-12 | 63.9 |
| MS.gene41702.t1 | MTR_1g087190 | 51.064 | 47 | 22 | 1 | 10 | 55 | 7 | 53 | 2.51e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41702.t1 | AT3G04070 | 51.892 | 370 | 129 | 13 | 4 | 340 | 6 | 359 | 1.22e-108 | 321 |
| MS.gene41702.t1 | AT3G04070 | 53.390 | 354 | 132 | 13 | 4 | 340 | 6 | 343 | 2.71e-108 | 320 |
| MS.gene41702.t1 | AT1G61110 | 68.927 | 177 | 39 | 4 | 1 | 169 | 9 | 177 | 3.04e-84 | 258 |
| MS.gene41702.t1 | AT1G69490 | 51.698 | 265 | 112 | 5 | 3 | 263 | 4 | 256 | 2.17e-83 | 254 |
| MS.gene41702.t1 | AT3G15510 | 68.639 | 169 | 39 | 3 | 12 | 173 | 21 | 182 | 4.19e-81 | 251 |
| MS.gene41702.t1 | AT1G01720 | 56.219 | 201 | 78 | 1 | 8 | 208 | 7 | 197 | 7.55e-77 | 238 |
| MS.gene41702.t1 | AT1G52880 | 68.902 | 164 | 40 | 3 | 12 | 170 | 21 | 178 | 2.03e-76 | 238 |
| MS.gene41702.t1 | AT1G77450 | 66.049 | 162 | 44 | 3 | 8 | 169 | 10 | 160 | 2.31e-74 | 230 |
| MS.gene41702.t1 | AT4G27410 | 63.253 | 166 | 48 | 3 | 5 | 170 | 11 | 163 | 2.42e-74 | 231 |
| MS.gene41702.t1 | AT3G15500 | 62.722 | 169 | 50 | 3 | 5 | 173 | 11 | 166 | 3.73e-72 | 227 |
| MS.gene41702.t1 | AT1G52890 | 61.538 | 169 | 52 | 2 | 5 | 173 | 11 | 166 | 4.11e-72 | 226 |
| MS.gene41702.t1 | AT4G27410 | 57.377 | 183 | 48 | 4 | 5 | 170 | 11 | 180 | 4.40e-70 | 221 |
| MS.gene41702.t1 | AT5G08790 | 60.241 | 166 | 55 | 2 | 5 | 169 | 4 | 159 | 3.29e-69 | 218 |
| MS.gene41702.t1 | AT5G63790 | 60.843 | 166 | 54 | 2 | 5 | 169 | 47 | 202 | 7.07e-69 | 218 |
| MS.gene41702.t1 | AT5G63790 | 60.843 | 166 | 54 | 2 | 5 | 169 | 57 | 212 | 1.07e-68 | 218 |
| MS.gene41702.t1 | AT3G18400 | 53.846 | 169 | 64 | 3 | 5 | 173 | 2 | 156 | 6.58e-61 | 197 |
| MS.gene41702.t1 | AT5G39610 | 53.939 | 165 | 65 | 3 | 5 | 169 | 17 | 170 | 1.30e-58 | 191 |
| MS.gene41702.t1 | AT5G61430 | 44.304 | 237 | 114 | 6 | 5 | 239 | 13 | 233 | 5.39e-58 | 191 |
| MS.gene41702.t1 | AT5G07680 | 53.614 | 166 | 66 | 3 | 5 | 170 | 14 | 168 | 9.54e-58 | 190 |
| MS.gene41702.t1 | AT2G33480 | 53.659 | 164 | 58 | 4 | 8 | 171 | 15 | 160 | 1.03e-57 | 188 |
| MS.gene41702.t1 | AT2G33480 | 53.659 | 164 | 60 | 4 | 8 | 171 | 15 | 162 | 1.75e-57 | 187 |
| MS.gene41702.t1 | AT5G53950 | 52.907 | 172 | 72 | 2 | 8 | 179 | 17 | 179 | 1.96e-57 | 191 |
| MS.gene41702.t1 | AT5G07680 | 53.659 | 164 | 65 | 3 | 7 | 170 | 2 | 154 | 4.06e-57 | 188 |
| MS.gene41702.t1 | AT5G13180 | 54.819 | 166 | 60 | 3 | 8 | 173 | 14 | 164 | 1.49e-56 | 184 |
| MS.gene41702.t1 | AT5G18270 | 49.714 | 175 | 78 | 2 | 2 | 176 | 15 | 179 | 3.59e-56 | 186 |
| MS.gene41702.t1 | AT3G29035 | 60.870 | 138 | 45 | 2 | 5 | 142 | 21 | 149 | 6.69e-56 | 185 |
| MS.gene41702.t1 | AT3G17730 | 39.921 | 253 | 131 | 6 | 6 | 253 | 4 | 240 | 7.25e-56 | 182 |
| MS.gene41702.t1 | AT3G04060 | 36.644 | 292 | 136 | 7 | 6 | 270 | 18 | 287 | 8.39e-56 | 185 |
| MS.gene41702.t1 | AT5G18270 | 49.143 | 175 | 79 | 2 | 2 | 176 | 15 | 179 | 1.52e-55 | 184 |
| MS.gene41702.t1 | AT5G39820 | 49.180 | 183 | 65 | 5 | 10 | 173 | 22 | 195 | 6.35e-55 | 183 |
| MS.gene41702.t1 | AT2G24430 | 52.121 | 165 | 67 | 2 | 8 | 172 | 16 | 168 | 6.45e-55 | 182 |
| MS.gene41702.t1 | AT2G24430 | 52.121 | 165 | 67 | 2 | 8 | 172 | 16 | 168 | 6.45e-55 | 182 |
| MS.gene41702.t1 | AT1G26870 | 51.786 | 168 | 69 | 3 | 8 | 170 | 16 | 176 | 6.62e-55 | 185 |
| MS.gene41702.t1 | AT3G03200 | 50.909 | 165 | 65 | 4 | 8 | 169 | 6 | 157 | 8.36e-55 | 186 |
| MS.gene41702.t1 | AT3G15170 | 44.595 | 222 | 96 | 5 | 8 | 224 | 20 | 219 | 1.24e-54 | 181 |
| MS.gene41702.t1 | AT1G76420 | 50.888 | 169 | 65 | 4 | 5 | 170 | 19 | 172 | 5.82e-54 | 180 |
| MS.gene41702.t1 | AT1G65910 | 48.235 | 170 | 73 | 3 | 6 | 173 | 4 | 160 | 2.45e-53 | 185 |
| MS.gene41702.t1 | AT1G71930 | 45.833 | 168 | 73 | 3 | 5 | 169 | 6 | 158 | 2.60e-53 | 178 |
| MS.gene41702.t1 | AT1G71930 | 45.833 | 168 | 73 | 3 | 5 | 169 | 6 | 158 | 2.60e-53 | 178 |
| MS.gene41702.t1 | AT5G17260 | 49.701 | 167 | 68 | 4 | 6 | 169 | 4 | 157 | 7.76e-53 | 181 |
| MS.gene41702.t1 | AT4G10350 | 47.486 | 179 | 78 | 3 | 8 | 183 | 9 | 174 | 8.01e-53 | 177 |
| MS.gene41702.t1 | AT1G12260 | 45.930 | 172 | 75 | 3 | 6 | 174 | 5 | 161 | 8.13e-53 | 177 |
| MS.gene41702.t1 | AT5G62380 | 43.655 | 197 | 90 | 5 | 7 | 199 | 6 | 185 | 9.79e-53 | 177 |
| MS.gene41702.t1 | AT5G62380 | 43.655 | 197 | 90 | 5 | 7 | 199 | 6 | 185 | 9.79e-53 | 177 |
| MS.gene41702.t1 | AT1G12260 | 45.930 | 172 | 75 | 3 | 6 | 174 | 5 | 161 | 1.20e-52 | 179 |
| MS.gene41702.t1 | AT2G18060 | 39.076 | 238 | 120 | 6 | 8 | 238 | 9 | 228 | 1.21e-52 | 177 |
| MS.gene41702.t1 | AT2G18060 | 39.076 | 238 | 120 | 6 | 8 | 238 | 9 | 228 | 1.21e-52 | 177 |
| MS.gene41702.t1 | AT2G43000 | 49.375 | 160 | 69 | 2 | 10 | 169 | 20 | 167 | 4.14e-52 | 174 |
| MS.gene41702.t1 | AT2G46770 | 46.893 | 177 | 73 | 4 | 5 | 169 | 13 | 180 | 4.56e-52 | 176 |
| MS.gene41702.t1 | AT4G36160 | 40.969 | 227 | 99 | 7 | 7 | 226 | 13 | 211 | 5.61e-52 | 176 |
| MS.gene41702.t1 | AT4G36160 | 40.969 | 227 | 99 | 7 | 7 | 226 | 9 | 207 | 5.98e-52 | 176 |
| MS.gene41702.t1 | AT4G36160 | 40.969 | 227 | 99 | 7 | 7 | 226 | 9 | 207 | 5.98e-52 | 176 |
| MS.gene41702.t1 | AT1G33280 | 48.555 | 173 | 68 | 4 | 1 | 169 | 1 | 156 | 8.05e-52 | 174 |
| MS.gene41702.t1 | AT1G62700 | 47.399 | 173 | 69 | 4 | 6 | 173 | 5 | 160 | 8.37e-52 | 176 |
| MS.gene41702.t1 | AT1G62700 | 47.399 | 173 | 69 | 4 | 6 | 173 | 5 | 160 | 8.37e-52 | 176 |
| MS.gene41702.t1 | AT1G79580 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.36e-51 | 175 |
| MS.gene41702.t1 | AT1G79580 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.36e-51 | 175 |
| MS.gene41702.t1 | AT1G79580 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.36e-51 | 175 |
| MS.gene41702.t1 | AT1G79580 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.36e-51 | 175 |
| MS.gene41702.t1 | AT1G79580 | 47.953 | 171 | 71 | 3 | 2 | 169 | 11 | 166 | 1.36e-51 | 175 |
| MS.gene41702.t1 | AT3G12977 | 49.398 | 166 | 70 | 6 | 5 | 169 | 15 | 167 | 3.25e-51 | 171 |
| MS.gene41702.t1 | AT1G56010 | 46.988 | 166 | 77 | 3 | 5 | 169 | 16 | 171 | 6.51e-51 | 172 |
| MS.gene41702.t1 | AT2G02450 | 52.174 | 161 | 61 | 4 | 10 | 169 | 53 | 198 | 1.68e-50 | 173 |
| MS.gene41702.t1 | AT2G02450 | 52.174 | 161 | 61 | 4 | 10 | 169 | 53 | 198 | 1.73e-50 | 172 |
| MS.gene41702.t1 | AT5G66300 | 45.783 | 166 | 73 | 3 | 7 | 169 | 11 | 162 | 6.34e-50 | 169 |
| MS.gene41702.t1 | AT3G61910 | 44.944 | 178 | 77 | 4 | 5 | 170 | 8 | 176 | 1.32e-49 | 169 |
| MS.gene41702.t1 | AT3G10480 | 48.795 | 166 | 70 | 3 | 6 | 169 | 25 | 177 | 1.35e-49 | 172 |
| MS.gene41702.t1 | AT4G17980 | 47.059 | 170 | 71 | 4 | 8 | 171 | 6 | 162 | 1.51e-49 | 167 |
| MS.gene41702.t1 | AT4G17980 | 46.328 | 177 | 74 | 5 | 1 | 171 | 1 | 162 | 1.55e-49 | 167 |
| MS.gene41702.t1 | AT3G10480 | 48.795 | 166 | 71 | 3 | 6 | 169 | 25 | 178 | 1.56e-49 | 172 |
| MS.gene41702.t1 | AT1G33060 | 51.220 | 164 | 65 | 3 | 8 | 169 | 24 | 174 | 2.07e-49 | 175 |
| MS.gene41702.t1 | AT3G10500 | 47.305 | 167 | 73 | 3 | 6 | 170 | 7 | 160 | 2.23e-49 | 173 |
| MS.gene41702.t1 | AT1G33060 | 51.220 | 164 | 65 | 3 | 8 | 169 | 24 | 174 | 2.30e-49 | 175 |
| MS.gene41702.t1 | AT5G46590 | 46.988 | 166 | 75 | 3 | 8 | 171 | 6 | 160 | 2.51e-49 | 167 |
| MS.gene41702.t1 | AT1G32770 | 46.552 | 174 | 75 | 5 | 5 | 169 | 13 | 177 | 4.69e-49 | 168 |
| MS.gene41702.t1 | AT1G54330 | 49.091 | 165 | 66 | 4 | 7 | 169 | 5 | 153 | 7.81e-49 | 166 |
| MS.gene41702.t1 | AT5G04410 | 47.305 | 167 | 73 | 3 | 6 | 170 | 7 | 160 | 8.32e-49 | 172 |
| MS.gene41702.t1 | AT3G10490 | 46.471 | 170 | 77 | 3 | 6 | 173 | 25 | 182 | 8.98e-49 | 164 |
| MS.gene41702.t1 | AT5G46590 | 51.064 | 141 | 59 | 2 | 8 | 146 | 6 | 138 | 1.05e-48 | 165 |
| MS.gene41702.t1 | AT4G35580 | 47.753 | 178 | 78 | 3 | 7 | 182 | 8 | 172 | 2.31e-48 | 170 |
| MS.gene41702.t1 | AT4G35580 | 47.753 | 178 | 78 | 3 | 7 | 182 | 8 | 172 | 2.35e-48 | 170 |
| MS.gene41702.t1 | AT1G32510 | 45.856 | 181 | 86 | 4 | 8 | 181 | 6 | 181 | 2.44e-48 | 164 |
| MS.gene41702.t1 | AT4G35580 | 47.753 | 178 | 78 | 3 | 7 | 182 | 8 | 172 | 2.69e-48 | 170 |
| MS.gene41702.t1 | AT3G10490 | 47.590 | 166 | 73 | 3 | 6 | 169 | 25 | 178 | 2.11e-47 | 166 |
| MS.gene41702.t1 | AT4G28530 | 45.055 | 182 | 69 | 5 | 6 | 171 | 8 | 174 | 4.06e-47 | 163 |
| MS.gene41702.t1 | AT2G17040 | 46.914 | 162 | 69 | 3 | 10 | 170 | 8 | 153 | 4.17e-47 | 160 |
| MS.gene41702.t1 | AT5G24590 | 42.654 | 211 | 98 | 6 | 7 | 206 | 12 | 210 | 1.36e-46 | 164 |
| MS.gene41702.t1 | AT3G49530 | 43.956 | 182 | 88 | 3 | 7 | 186 | 12 | 181 | 2.70e-45 | 159 |
| MS.gene41702.t1 | AT3G49530 | 43.956 | 182 | 88 | 3 | 7 | 186 | 12 | 181 | 5.87e-45 | 160 |
| MS.gene41702.t1 | AT3G10480 | 41.709 | 199 | 69 | 4 | 6 | 169 | 25 | 211 | 1.65e-44 | 160 |
| MS.gene41702.t1 | AT1G34180 | 46.012 | 163 | 73 | 5 | 10 | 170 | 18 | 167 | 2.41e-44 | 158 |
| MS.gene41702.t1 | AT5G64060 | 43.114 | 167 | 80 | 3 | 5 | 169 | 3 | 156 | 7.87e-44 | 154 |
| MS.gene41702.t1 | AT3G12910 | 40.278 | 216 | 111 | 5 | 10 | 214 | 23 | 231 | 9.21e-44 | 153 |
| MS.gene41702.t1 | AT1G34180 | 44.785 | 163 | 75 | 4 | 10 | 170 | 18 | 167 | 1.53e-43 | 158 |
| MS.gene41702.t1 | AT1G34190 | 44.785 | 163 | 75 | 5 | 10 | 170 | 18 | 167 | 5.20e-43 | 156 |
| MS.gene41702.t1 | AT2G27300 | 41.081 | 185 | 88 | 4 | 1 | 184 | 7 | 171 | 1.84e-42 | 150 |
| MS.gene41702.t1 | AT1G34180 | 42.857 | 175 | 73 | 5 | 10 | 170 | 18 | 179 | 2.48e-42 | 153 |
| MS.gene41702.t1 | AT5G09330 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.21e-42 | 152 |
| MS.gene41702.t1 | AT5G09330 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.21e-42 | 152 |
| MS.gene41702.t1 | AT5G09330 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.21e-42 | 152 |
| MS.gene41702.t1 | AT5G09330 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.21e-42 | 152 |
| MS.gene41702.t1 | AT5G09330 | 44.643 | 168 | 76 | 4 | 5 | 169 | 3 | 156 | 8.21e-42 | 152 |
| MS.gene41702.t1 | AT1G34180 | 42.857 | 175 | 73 | 5 | 10 | 170 | 18 | 179 | 1.64e-41 | 152 |
| MS.gene41702.t1 | AT3G44290 | 40.491 | 163 | 76 | 3 | 10 | 171 | 16 | 158 | 1.47e-39 | 139 |
| MS.gene41702.t1 | AT3G44290 | 40.491 | 163 | 76 | 3 | 10 | 171 | 16 | 158 | 9.32e-39 | 140 |
| MS.gene41702.t1 | AT5G22290 | 40.625 | 160 | 75 | 4 | 10 | 168 | 23 | 163 | 3.24e-38 | 139 |
| MS.gene41702.t1 | AT5G04395 | 41.615 | 161 | 75 | 2 | 5 | 152 | 25 | 179 | 1.72e-37 | 133 |
| MS.gene41702.t1 | AT1G32870 | 46.988 | 166 | 71 | 5 | 8 | 170 | 10 | 161 | 3.85e-37 | 140 |
| MS.gene41702.t1 | AT1G32870 | 46.988 | 166 | 71 | 5 | 8 | 170 | 10 | 161 | 4.33e-37 | 140 |
| MS.gene41702.t1 | AT1G32870 | 46.988 | 166 | 71 | 5 | 8 | 170 | 46 | 197 | 7.20e-37 | 139 |
| MS.gene41702.t1 | AT5G61430 | 46.207 | 145 | 63 | 4 | 57 | 201 | 2 | 131 | 2.64e-34 | 127 |
| MS.gene41702.t1 | AT1G56010 | 48.673 | 113 | 48 | 2 | 57 | 169 | 2 | 104 | 1.08e-32 | 122 |
| MS.gene41702.t1 | AT2G33480 | 52.252 | 111 | 40 | 4 | 61 | 171 | 8 | 105 | 2.08e-31 | 117 |
| MS.gene41702.t1 | AT5G64530 | 35.838 | 173 | 82 | 4 | 7 | 169 | 2 | 155 | 3.54e-31 | 116 |
| MS.gene41702.t1 | AT4G10350 | 46.341 | 123 | 53 | 2 | 61 | 183 | 18 | 127 | 7.41e-31 | 118 |
| MS.gene41702.t1 | AT3G12977 | 48.673 | 113 | 46 | 4 | 57 | 169 | 14 | 114 | 8.83e-31 | 116 |
| MS.gene41702.t1 | AT5G64530 | 41.304 | 138 | 62 | 3 | 7 | 144 | 2 | 120 | 3.42e-30 | 113 |
| MS.gene41702.t1 | AT3G44350 | 37.647 | 170 | 86 | 6 | 8 | 170 | 5 | 161 | 9.68e-29 | 111 |
| MS.gene41702.t1 | AT4G28530 | 48.182 | 110 | 41 | 2 | 6 | 99 | 8 | 117 | 6.84e-28 | 111 |
| MS.gene41702.t1 | AT3G44350 | 39.310 | 145 | 71 | 4 | 8 | 145 | 5 | 139 | 1.38e-27 | 106 |
| MS.gene41702.t1 | AT5G22380 | 38.415 | 164 | 83 | 6 | 11 | 167 | 8 | 160 | 1.18e-26 | 105 |
| MS.gene41702.t1 | AT4G01520 | 35.714 | 182 | 98 | 6 | 9 | 186 | 5 | 171 | 3.89e-26 | 106 |
| MS.gene41702.t1 | AT1G02230 | 41.912 | 136 | 66 | 5 | 9 | 140 | 4 | 130 | 1.05e-25 | 105 |
| MS.gene41702.t1 | AT4G01540 | 35.556 | 180 | 97 | 6 | 11 | 186 | 7 | 171 | 2.25e-25 | 105 |
| MS.gene41702.t1 | AT4G01540 | 35.556 | 180 | 97 | 6 | 11 | 186 | 7 | 171 | 3.28e-25 | 105 |
| MS.gene41702.t1 | AT4G01550 | 40.741 | 135 | 71 | 3 | 11 | 142 | 7 | 135 | 4.04e-25 | 105 |
| MS.gene41702.t1 | AT4G01540 | 35.556 | 180 | 97 | 6 | 11 | 186 | 7 | 171 | 7.15e-25 | 105 |
| MS.gene41702.t1 | AT4G01540 | 35.165 | 182 | 95 | 6 | 11 | 186 | 7 | 171 | 7.18e-25 | 104 |
| MS.gene41702.t1 | AT3G04420 | 41.176 | 136 | 67 | 4 | 9 | 140 | 4 | 130 | 3.45e-24 | 100 |
| MS.gene41702.t1 | AT1G02250 | 41.912 | 136 | 66 | 6 | 9 | 140 | 4 | 130 | 1.06e-22 | 97.8 |
| MS.gene41702.t1 | AT2G43000 | 44.000 | 100 | 44 | 2 | 70 | 169 | 2 | 89 | 5.72e-22 | 92.4 |
| MS.gene41702.t1 | AT5G50820 | 28.713 | 202 | 120 | 7 | 1 | 199 | 10 | 190 | 3.45e-20 | 87.4 |
| MS.gene41702.t1 | AT5G14000 | 37.681 | 138 | 73 | 4 | 8 | 143 | 15 | 141 | 4.49e-20 | 85.9 |
| MS.gene41702.t1 | AT5G14000 | 37.681 | 138 | 73 | 4 | 8 | 143 | 15 | 141 | 1.27e-19 | 86.3 |
| MS.gene41702.t1 | AT1G01010 | 38.235 | 136 | 73 | 6 | 11 | 140 | 6 | 136 | 5.20e-19 | 87.8 |
| MS.gene41702.t1 | AT1G02220 | 36.364 | 143 | 75 | 5 | 9 | 147 | 4 | 134 | 6.87e-19 | 87.4 |
| MS.gene41702.t1 | AT3G56530 | 33.918 | 171 | 89 | 6 | 3 | 167 | 47 | 199 | 2.29e-18 | 84.7 |
| MS.gene41702.t1 | AT3G10490 | 43.333 | 90 | 39 | 2 | 81 | 170 | 2 | 79 | 1.47e-17 | 82.8 |
| MS.gene41702.t1 | AT3G10490 | 43.333 | 90 | 39 | 2 | 81 | 170 | 2 | 79 | 1.47e-17 | 82.8 |
| MS.gene41702.t1 | AT2G18060 | 31.847 | 157 | 85 | 5 | 86 | 238 | 2 | 140 | 4.87e-16 | 77.4 |
| MS.gene41702.t1 | AT3G55210 | 30.337 | 178 | 85 | 8 | 8 | 167 | 11 | 167 | 8.52e-15 | 73.9 |
| MS.gene41702.t1 | AT3G04430 | 33.838 | 198 | 106 | 7 | 14 | 197 | 6 | 192 | 2.22e-13 | 68.6 |
Find 82 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAATCTTTGAGCTTAAT+AGG | 0.214933 | 7.2:+22446481 | None:intergenic |
| CCAAACAGGGCAGCTGCTTC+AGG | 0.233922 | 7.2:-22446685 | MS.gene41702:CDS |
| CAAAGGGTATTAAGACTAAT+TGG | 0.272980 | 7.2:-22446540 | MS.gene41702:CDS |
| TCATACTGTGAATTGATGTT+AGG | 0.286405 | 7.2:+22445813 | None:intergenic |
| CTGTTTGGCCTTGCACCATT+TGG | 0.309858 | 7.2:+22446700 | None:intergenic |
| CCTAAAACCTGGTGGCAAAT+TGG | 0.316582 | 7.2:+22447060 | None:intergenic |
| TCAGGAATTGGAACAAGTTC+AGG | 0.323297 | 7.2:-22446005 | MS.gene41702:CDS |
| GAACATTATTGGTGTCAAAA+AGG | 0.335100 | 7.2:-22446590 | MS.gene41702:CDS |
| CCTGAAGCAGCTGCCCTGTT+TGG | 0.348250 | 7.2:+22446685 | None:intergenic |
| AATTGTTGCTAGTGTTGATT+TGG | 0.352114 | 7.2:+22445946 | None:intergenic |
| TGTTTGGCCTTGCACCATTT+GGG | 0.356073 | 7.2:+22446701 | None:intergenic |
| GAACTCAAGTATTTCTTTGA+TGG | 0.365426 | 7.2:+22445849 | None:intergenic |
| CAAATGGTGCAAGGCCAAAC+AGG | 0.366982 | 7.2:-22446699 | MS.gene41702:CDS |
| CAATTAGTCTTAATACCCTT+TGG | 0.368121 | 7.2:+22446541 | None:intergenic |
| TCCAACAACCCATCAGGAAT+TGG | 0.378181 | 7.2:-22446017 | MS.gene41702:CDS |
| AACAGAATCATCAGAAACTA+TGG | 0.378730 | 7.2:-22446213 | MS.gene41702:CDS |
| AGATCACAAGAGAACATTAT+TGG | 0.382269 | 7.2:-22446601 | MS.gene41702:CDS |
| TGTTTGTGCAGTTGGATGAT+TGG | 0.385009 | 7.2:-22446280 | MS.gene41702:intron |
| AGTAGTCCATAGCATCTAAT+AGG | 0.386901 | 7.2:+22446069 | None:intergenic |
| GGGCAGCTGCTTCAGGGTAT+TGG | 0.391648 | 7.2:-22446678 | MS.gene41702:CDS |
| CATACTGTGAATTGATGTTA+GGG | 0.411622 | 7.2:+22445814 | None:intergenic |
| GTTTGTGCAGTTGGATGATT+GGG | 0.416916 | 7.2:-22446279 | MS.gene41702:intron |
| AATATCAACTTCAGCAATGA+TGG | 0.422653 | 7.2:+22446964 | None:intergenic |
| CTTCATTTGGCGAGAAAGAA+TGG | 0.427536 | 7.2:-22446753 | MS.gene41702:CDS |
| CCTCATCTATGTTTGAAAGC+TGG | 0.441085 | 7.2:+22445883 | None:intergenic |
| TCCAATTCCTGATGGGTTGT+TGG | 0.442082 | 7.2:+22446016 | None:intergenic |
| TTCAAACCTATTAGATGCTA+TGG | 0.444967 | 7.2:-22446075 | MS.gene41702:CDS |
| ACATGGCAATGATGCCACTA+TGG | 0.444972 | 7.2:+22446633 | None:intergenic |
| TGAAGTTGATATTTATAAGT+TGG | 0.446373 | 7.2:-22446954 | MS.gene41702:CDS |
| ACTTCAGCAATGATGGAAAC+AGG | 0.451615 | 7.2:+22446971 | None:intergenic |
| GAAAATTCCAACAACCCATC+AGG | 0.469177 | 7.2:-22446023 | MS.gene41702:CDS |
| GAACTTGTTCCAATTCCTGA+TGG | 0.472125 | 7.2:+22446008 | None:intergenic |
| AGCATCTAATAGGTTTGAAA+AGG | 0.474398 | 7.2:+22446079 | None:intergenic |
| TATTTATAAGTTGGATCCAT+GGG | 0.475414 | 7.2:-22446945 | MS.gene41702:CDS |
| TCATCAAAGATTGCTTCATA+AGG | 0.476729 | 7.2:+22445784 | None:intergenic |
| AACTCAAGTATTTCTTTGAT+GGG | 0.477999 | 7.2:+22445850 | None:intergenic |
| CCACAGACCAATTTGCCACC+AGG | 0.478013 | 7.2:-22447067 | MS.gene41702:CDS |
| AACTTGTTCCAATTCCTGAT+GGG | 0.488918 | 7.2:+22446009 | None:intergenic |
| ATATTTATAAGTTGGATCCA+TGG | 0.488986 | 7.2:-22446946 | MS.gene41702:CDS |
| AACTCATTCTTCACTACCTT+AGG | 0.494410 | 7.2:-22447018 | MS.gene41702:CDS |
| ATTGTTGCTAGTGTTGATTT+GGG | 0.495042 | 7.2:+22445947 | None:intergenic |
| AGAAACTATGGTTGGTGAAG+TGG | 0.502853 | 7.2:-22446201 | MS.gene41702:CDS |
| CAAACAGGGCAGCTGCTTCA+GGG | 0.503732 | 7.2:-22446684 | MS.gene41702:CDS |
| AAGCTGGTGCTTTAAAGTGT+TGG | 0.507075 | 7.2:+22445899 | None:intergenic |
| TTTGGGTACTTTCTATCTCT+AGG | 0.511526 | 7.2:+22446718 | None:intergenic |
| TTAGTCTTAATACCCTTTGG+AGG | 0.513448 | 7.2:+22446544 | None:intergenic |
| TACAAAGGAAAACCTCCAAA+GGG | 0.513769 | 7.2:-22446556 | MS.gene41702:CDS |
| TGCTTTAAAGTGTTGGATTG+AGG | 0.514061 | 7.2:+22445906 | None:intergenic |
| CTGGTGGCAAATTGGTCTGT+GGG | 0.514571 | 7.2:+22447068 | None:intergenic |
| AGAGATAGAAAGTACCCAAA+TGG | 0.527590 | 7.2:-22446715 | MS.gene41702:CDS |
| GGTCCTCATCATCAATATCA+AGG | 0.532163 | 7.2:-22445744 | MS.gene41702:CDS |
| GCATCATTGCCATGTGGAGG+AGG | 0.534639 | 7.2:-22446625 | MS.gene41702:CDS |
| GCAATCTAAACTCACCCTCA+TGG | 0.537490 | 7.2:+22446459 | None:intergenic |
| TTGGATCCATGGGATTTACC+AGG | 0.553332 | 7.2:-22446935 | MS.gene41702:intron |
| GATGGAAACAGGCAAGGGAA+TGG | 0.553802 | 7.2:+22446982 | None:intergenic |
| TAGCCTTGATATTGATGATG+AGG | 0.557215 | 7.2:+22445741 | None:intergenic |
| AGAATGAGTTCTGCATCAGT+AGG | 0.563104 | 7.2:+22447031 | None:intergenic |
| TTACAAAGGAAAACCTCCAA+AGG | 0.565027 | 7.2:-22446557 | MS.gene41702:CDS |
| AGCAATGATGGAAACAGGCA+AGG | 0.566156 | 7.2:+22446976 | None:intergenic |
| TACAAACCTGGTAAATCCCA+TGG | 0.570239 | 7.2:+22446929 | None:intergenic |
| TGTGATCTTCCTCCTCCACA+TGG | 0.570951 | 7.2:+22446616 | None:intergenic |
| TCAGGGTATTGGAAAGCCAC+TGG | 0.577725 | 7.2:-22446667 | MS.gene41702:CDS |
| GCTCAAAGATTCTTCCATGA+GGG | 0.597300 | 7.2:-22446473 | MS.gene41702:intron |
| AGATAAGAAGCTGCTCAACA+TGG | 0.598584 | 7.2:+22446046 | None:intergenic |
| GAATGAGTTCTGCATCAGTA+GGG | 0.601787 | 7.2:+22447032 | None:intergenic |
| CCTGGTGGCAAATTGGTCTG+TGG | 0.602988 | 7.2:+22447067 | None:intergenic |
| GAATCATCAGAAACTATGGT+TGG | 0.606547 | 7.2:-22446209 | MS.gene41702:CDS |
| GGAAACAGGCAAGGGAATGG+AGG | 0.614063 | 7.2:+22446985 | None:intergenic |
| GATGTTAGGGAAATTGCAAG+AGG | 0.615894 | 7.2:+22445827 | None:intergenic |
| TATGGTCTTATCAGTGCCAG+TGG | 0.623985 | 7.2:+22446651 | None:intergenic |
| TGAGTTCTGCATCAGTAGGG+TGG | 0.625467 | 7.2:+22447035 | None:intergenic |
| GAAAGTACCCAAATGGTGCA+AGG | 0.625637 | 7.2:-22446708 | MS.gene41702:CDS |
| GCAATGATGGAAACAGGCAA+GGG | 0.627238 | 7.2:+22446977 | None:intergenic |
| TGGTGGCAAATTGGTCTGTG+GGG | 0.627247 | 7.2:+22447069 | None:intergenic |
| GTAGGGTGGAACCTAAAACC+TGG | 0.637724 | 7.2:+22447049 | None:intergenic |
| AGCTCAAAGATTCTTCCATG+AGG | 0.640457 | 7.2:-22446474 | MS.gene41702:CDS |
| AAATGGTGCAAGGCCAAACA+GGG | 0.643288 | 7.2:-22446698 | MS.gene41702:CDS |
| GTGGCATCATTGCCATGTGG+AGG | 0.648100 | 7.2:-22446628 | MS.gene41702:CDS |
| CCAGCTTTCAAACATAGATG+AGG | 0.665846 | 7.2:-22445883 | MS.gene41702:CDS |
| TGGCACTGATAAGACCATAG+TGG | 0.666772 | 7.2:-22446647 | MS.gene41702:CDS |
| GGGTGGAACCTAAAACCTGG+TGG | 0.747301 | 7.2:+22447052 | None:intergenic |
| ATAGTGGCATCATTGCCATG+TGG | 0.762428 | 7.2:-22446631 | MS.gene41702:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTACATACATATATTT+TGG | + | chr7.2:22445950-22445969 | None:intergenic | 15.0% |
| !!! | ATTTTGATTTCTTGTAAATT+CGG | + | chr7.2:22446570-22446589 | None:intergenic | 15.0% |
| !! | AAATTTAATAATGTGTGATG+TGG | - | chr7.2:22445990-22446009 | MS.gene41702:CDS | 20.0% |
| !! | AAATTTATAGAATACAAACC+TGG | + | chr7.2:22445902-22445921 | None:intergenic | 20.0% |
| !!! | AATTTACTTTTAGTTTGTTG+TGG | - | chr7.2:22446019-22446038 | MS.gene41702:CDS | 20.0% |
| !!! | TGAAGTTGATATTTATAAGT+TGG | - | chr7.2:22445862-22445881 | MS.gene41702:CDS | 20.0% |
| ! | AACTCAAGTATTTCTTTGAT+GGG | + | chr7.2:22446969-22446988 | None:intergenic | 25.0% |
| ! | TCTTAGACTAATGTTATTCT+TGG | - | chr7.2:22446507-22446526 | MS.gene41702:CDS | 25.0% |
| !! | ATATTTATAAGTTGGATCCA+TGG | - | chr7.2:22445870-22445889 | MS.gene41702:CDS | 25.0% |
| !! | TATTTATAAGTTGGATCCAT+GGG | - | chr7.2:22445871-22445890 | MS.gene41702:CDS | 25.0% |
| !!! | ATGAATCAACAATTGCTTTT+AGG | - | chr7.2:22447051-22447070 | MS.gene41702:CDS | 25.0% |
| AACAGAATCATCAGAAACTA+TGG | - | chr7.2:22446603-22446622 | MS.gene41702:CDS | 30.0% | |
| AATATCAACTTCAGCAATGA+TGG | + | chr7.2:22445855-22445874 | None:intergenic | 30.0% | |
| AGATCACAAGAGAACATTAT+TGG | - | chr7.2:22446215-22446234 | MS.gene41702:CDS | 30.0% | |
| AGCATCTAATAGGTTTGAAA+AGG | + | chr7.2:22446740-22446759 | None:intergenic | 30.0% | |
| CATACTGTGAATTGATGTTA+GGG | + | chr7.2:22447005-22447024 | None:intergenic | 30.0% | |
| GAACTCAAGTATTTCTTTGA+TGG | + | chr7.2:22446970-22446989 | None:intergenic | 30.0% | |
| GAAGAATCTTTGAGCTTAAT+AGG | + | chr7.2:22446338-22446357 | None:intergenic | 30.0% | |
| TCATACTGTGAATTGATGTT+AGG | + | chr7.2:22447006-22447025 | None:intergenic | 30.0% | |
| TCATCAAAGATTGCTTCATA+AGG | + | chr7.2:22447035-22447054 | None:intergenic | 30.0% | |
| TTAATAATGTGTGATGTGGA+AGG | - | chr7.2:22445994-22446013 | MS.gene41702:CDS | 30.0% | |
| TTCAAACCTATTAGATGCTA+TGG | - | chr7.2:22446741-22446760 | MS.gene41702:CDS | 30.0% | |
| ! | TTTTCAGCTAAAGCTTCATT+TGG | - | chr7.2:22446050-22446069 | MS.gene41702:CDS | 30.0% |
| !! | AATTGTTGCTAGTGTTGATT+TGG | + | chr7.2:22446873-22446892 | None:intergenic | 30.0% |
| !! | ATTGTTGCTAGTGTTGATTT+GGG | + | chr7.2:22446872-22446891 | None:intergenic | 30.0% |
| !! | CAAAGGGTATTAAGACTAAT+TGG | - | chr7.2:22446276-22446295 | MS.gene41702:intron | 30.0% |
| !! | CAATTAGTCTTAATACCCTT+TGG | + | chr7.2:22446278-22446297 | None:intergenic | 30.0% |
| !! | GAACATTATTGGTGTCAAAA+AGG | - | chr7.2:22446226-22446245 | MS.gene41702:CDS | 30.0% |
| !!! | AAGGCTCTTGTTTTTTACAA+AGG | - | chr7.2:22446245-22446264 | MS.gene41702:CDS | 30.0% |
| !!! | GTTTTTGGTGATTGGAAAAA+GGG | + | chr7.2:22446671-22446690 | None:intergenic | 30.0% |
| !!! | TGTTTTTGGTGATTGGAAAA+AGG | + | chr7.2:22446672-22446691 | None:intergenic | 30.0% |
| AACTCATTCTTCACTACCTT+AGG | - | chr7.2:22445798-22445817 | MS.gene41702:CDS | 35.0% | |
| AGTAGTCCATAGCATCTAAT+AGG | + | chr7.2:22446750-22446769 | None:intergenic | 35.0% | |
| GAATCATCAGAAACTATGGT+TGG | - | chr7.2:22446607-22446626 | MS.gene41702:CDS | 35.0% | |
| GGAATTATTGTTTGTGCAGT+TGG | - | chr7.2:22446528-22446547 | MS.gene41702:CDS | 35.0% | |
| TACAAAGGAAAACCTCCAAA+GGG | - | chr7.2:22446260-22446279 | MS.gene41702:CDS | 35.0% | |
| TGATTGGAAAAAGGGTTTCT+TGG | + | chr7.2:22446663-22446682 | None:intergenic | 35.0% | |
| TTACAAAGGAAAACCTCCAA+AGG | - | chr7.2:22446259-22446278 | MS.gene41702:CDS | 35.0% | |
| TTGATGTCTTTGTTCGATTG+TGG | + | chr7.2:22446432-22446451 | None:intergenic | 35.0% | |
| TTTGGGTACTTTCTATCTCT+AGG | + | chr7.2:22446101-22446120 | None:intergenic | 35.0% | |
| ! | AACTTGTTCCAATTCCTGAT+GGG | + | chr7.2:22446810-22446829 | None:intergenic | 35.0% |
| ! | AAGAGGTGATGTTGTGTTTT+TGG | + | chr7.2:22446686-22446705 | None:intergenic | 35.0% |
| !! | AGAGATAGAAAGTACCCAAA+TGG | - | chr7.2:22446101-22446120 | MS.gene41702:CDS | 35.0% |
| !! | TAGCCTTGATATTGATGATG+AGG | + | chr7.2:22447078-22447097 | None:intergenic | 35.0% |
| !! | TGCTTTAAAGTGTTGGATTG+AGG | + | chr7.2:22446913-22446932 | None:intergenic | 35.0% |
| !! | TTAGTCTTAATACCCTTTGG+AGG | + | chr7.2:22446275-22446294 | None:intergenic | 35.0% |
| !!! | GATGTTGTGTTTTTGGTGAT+TGG | + | chr7.2:22446679-22446698 | None:intergenic | 35.0% |
| !!! | TGGAGGCAATTTTTTTCCTA+AGG | + | chr7.2:22445817-22445836 | None:intergenic | 35.0% |
| AGAATGAGTTCTGCATCAGT+AGG | + | chr7.2:22445788-22445807 | None:intergenic | 40.0% | |
| AGATAAGAAGCTGCTCAACA+TGG | + | chr7.2:22446773-22446792 | None:intergenic | 40.0% | |
| AGCTCAAAGATTCTTCCATG+AGG | - | chr7.2:22446342-22446361 | MS.gene41702:intron | 40.0% | |
| ATGAGGGTGAGTTTAGATTG+CGG | - | chr7.2:22446359-22446378 | MS.gene41702:intron | 40.0% | |
| CCAGCTTTCAAACATAGATG+AGG | - | chr7.2:22446933-22446952 | MS.gene41702:intron | 40.0% | |
| CCTCATCTATGTTTGAAAGC+TGG | + | chr7.2:22446936-22446955 | None:intergenic | 40.0% | |
| CTTCATTTGGCGAGAAAGAA+TGG | - | chr7.2:22446063-22446082 | MS.gene41702:CDS | 40.0% | |
| GAAAATTCCAACAACCCATC+AGG | - | chr7.2:22446793-22446812 | MS.gene41702:intron | 40.0% | |
| GAATGAGTTCTGCATCAGTA+GGG | + | chr7.2:22445787-22445806 | None:intergenic | 40.0% | |
| GATGTTAGGGAAATTGCAAG+AGG | + | chr7.2:22446992-22447011 | None:intergenic | 40.0% | |
| GCTCAAAGATTCTTCCATGA+GGG | - | chr7.2:22446343-22446362 | MS.gene41702:intron | 40.0% | |
| GGTCCTCATCATCAATATCA+AGG | - | chr7.2:22447072-22447091 | MS.gene41702:CDS | 40.0% | |
| GTTTGTGCAGTTGGATGATT+GGG | - | chr7.2:22446537-22446556 | MS.gene41702:CDS | 40.0% | |
| TACAAACCTGGTAAATCCCA+TGG | + | chr7.2:22445890-22445909 | None:intergenic | 40.0% | |
| TCAGGAATTGGAACAAGTTC+AGG | - | chr7.2:22446811-22446830 | MS.gene41702:intron | 40.0% | |
| TGTTTGTGCAGTTGGATGAT+TGG | - | chr7.2:22446536-22446555 | MS.gene41702:CDS | 40.0% | |
| TTGATGTAGTTGTTCGACTG+TGG | - | chr7.2:22446463-22446482 | MS.gene41702:intron | 40.0% | |
| ! | ACTTCAGCAATGATGGAAAC+AGG | + | chr7.2:22445848-22445867 | None:intergenic | 40.0% |
| ! | GAACTTGTTCCAATTCCTGA+TGG | + | chr7.2:22446811-22446830 | None:intergenic | 40.0% |
| !! | AAGCTGGTGCTTTAAAGTGT+TGG | + | chr7.2:22446920-22446939 | None:intergenic | 40.0% |
| !! | AGAAACTATGGTTGGTGAAG+TGG | - | chr7.2:22446615-22446634 | MS.gene41702:CDS | 40.0% |
| !!! | GACATGAGTGTGTTTTGAAG+AGG | + | chr7.2:22446703-22446722 | None:intergenic | 40.0% |
| AAATGGTGCAAGGCCAAACA+GGG | - | chr7.2:22446118-22446137 | MS.gene41702:CDS | 45.0% | |
| ACATGGCAATGATGCCACTA+TGG | + | chr7.2:22446186-22446205 | None:intergenic | 45.0% | |
| ATAGTGGCATCATTGCCATG+TGG | - | chr7.2:22446185-22446204 | MS.gene41702:CDS | 45.0% | |
| CCTAAAACCTGGTGGCAAAT+TGG | + | chr7.2:22445759-22445778 | None:intergenic | 45.0% | |
| GCAATCTAAACTCACCCTCA+TGG | + | chr7.2:22446360-22446379 | None:intergenic | 45.0% | |
| GTTCGATTGTGGCAAGACTA+TGG | + | chr7.2:22446421-22446440 | None:intergenic | 45.0% | |
| TCCAACAACCCATCAGGAAT+TGG | - | chr7.2:22446799-22446818 | MS.gene41702:intron | 45.0% | |
| TTGGATCCATGGGATTTACC+AGG | - | chr7.2:22445881-22445900 | MS.gene41702:CDS | 45.0% | |
| ! | AGCAATGATGGAAACAGGCA+AGG | + | chr7.2:22445843-22445862 | None:intergenic | 45.0% |
| ! | CCAATTTGCCACCAGGTTTT+AGG | - | chr7.2:22445756-22445775 | MS.gene41702:CDS | 45.0% |
| ! | GCAATGATGGAAACAGGCAA+GGG | + | chr7.2:22445842-22445861 | None:intergenic | 45.0% |
| !! | GAAAGTACCCAAATGGTGCA+AGG | - | chr7.2:22446108-22446127 | MS.gene41702:CDS | 45.0% |
| !! | TATGGTCTTATCAGTGCCAG+TGG | + | chr7.2:22446168-22446187 | None:intergenic | 45.0% |
| !! | TCCAATTCCTGATGGGTTGT+TGG | + | chr7.2:22446803-22446822 | None:intergenic | 45.0% |
| !! | TGGCACTGATAAGACCATAG+TGG | - | chr7.2:22446169-22446188 | MS.gene41702:CDS | 45.0% |
| !! | TGTTTGGCCTTGCACCATTT+GGG | + | chr7.2:22446118-22446137 | None:intergenic | 45.0% |
| !! | TTCTATAAATTTAAATTTAA+AGG | - | chr7.2:22445910-22445929 | MS.gene41702:CDS | 5.0% |
| CAAATGGTGCAAGGCCAAAC+AGG | - | chr7.2:22446117-22446136 | MS.gene41702:CDS | 50.0% | |
| GATGGAAACAGGCAAGGGAA+TGG | + | chr7.2:22445837-22445856 | None:intergenic | 50.0% | |
| GTAGGGTGGAACCTAAAACC+TGG | + | chr7.2:22445770-22445789 | None:intergenic | 50.0% | |
| TGAGTTCTGCATCAGTAGGG+TGG | + | chr7.2:22445784-22445803 | None:intergenic | 50.0% | |
| TGTGATCTTCCTCCTCCACA+TGG | + | chr7.2:22446203-22446222 | None:intergenic | 50.0% | |
| ! | CTGGTGGCAAATTGGTCTGT+GGG | + | chr7.2:22445751-22445770 | None:intergenic | 50.0% |
| ! | TGGTGGCAAATTGGTCTGTG+GGG | + | chr7.2:22445750-22445769 | None:intergenic | 50.0% |
| !! | CTGTTTGGCCTTGCACCATT+TGG | + | chr7.2:22446119-22446138 | None:intergenic | 50.0% |
| !! | TCAGGGTATTGGAAAGCCAC+TGG | - | chr7.2:22446149-22446168 | MS.gene41702:CDS | 50.0% |
| CAAACAGGGCAGCTGCTTCA+GGG | - | chr7.2:22446132-22446151 | MS.gene41702:CDS | 55.0% | |
| CCACAGACCAATTTGCCACC+AGG | - | chr7.2:22445749-22445768 | MS.gene41702:CDS | 55.0% | |
| GCATCATTGCCATGTGGAGG+AGG | - | chr7.2:22446191-22446210 | MS.gene41702:CDS | 55.0% | |
| GGAAACAGGCAAGGGAATGG+AGG | + | chr7.2:22445834-22445853 | None:intergenic | 55.0% | |
| GGGTGGAACCTAAAACCTGG+TGG | + | chr7.2:22445767-22445786 | None:intergenic | 55.0% | |
| GTGGCATCATTGCCATGTGG+AGG | - | chr7.2:22446188-22446207 | MS.gene41702:CDS | 55.0% | |
| ! | CCTGGTGGCAAATTGGTCTG+TGG | + | chr7.2:22445752-22445771 | None:intergenic | 55.0% |
| CCAAACAGGGCAGCTGCTTC+AGG | - | chr7.2:22446131-22446150 | MS.gene41702:CDS | 60.0% | |
| CCTGAAGCAGCTGCCCTGTT+TGG | + | chr7.2:22446134-22446153 | None:intergenic | 60.0% | |
| GGGCAGCTGCTTCAGGGTAT+TGG | - | chr7.2:22446138-22446157 | MS.gene41702:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 22445740 | 22447098 | 22445740 | ID=MS.gene41702 |
| chr7.2 | mRNA | 22445740 | 22447098 | 22445740 | ID=MS.gene41702.t1;Parent=MS.gene41702 |
| chr7.2 | exon | 22446936 | 22447098 | 22446936 | ID=MS.gene41702.t1.exon1;Parent=MS.gene41702.t1 |
| chr7.2 | CDS | 22446936 | 22447098 | 22446936 | ID=cds.MS.gene41702.t1;Parent=MS.gene41702.t1 |
| chr7.2 | exon | 22446474 | 22446781 | 22446474 | ID=MS.gene41702.t1.exon2;Parent=MS.gene41702.t1 |
| chr7.2 | CDS | 22446474 | 22446781 | 22446474 | ID=cds.MS.gene41702.t1;Parent=MS.gene41702.t1 |
| chr7.2 | exon | 22445740 | 22446291 | 22445740 | ID=MS.gene41702.t1.exon3;Parent=MS.gene41702.t1 |
| chr7.2 | CDS | 22445740 | 22446291 | 22445740 | ID=cds.MS.gene41702.t1;Parent=MS.gene41702.t1 |
| Gene Sequence |
| Protein sequence |
