Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41737.t1 | XP_003624635.1 | 99.3 | 1118 | 8 | 0 | 1 | 1118 | 1 | 1118 | 0.00E+00 | 2150.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41737.t1 | Q8BKC5 | 36.2 | 1111 | 658 | 16 | 28 | 1118 | 17 | 1096 | 1.7e-186 | 654.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41737.t1 | A5XEM2 | 99.3 | 1118 | 8 | 0 | 1 | 1118 | 1 | 1118 | 0.0e+00 | 2150.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059007 | MS.gene41737 | 0.836325 | 1.00E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41737.t1 | MTR_7g085820 | 99.374 | 1118 | 7 | 0 | 1 | 1118 | 1 | 1118 | 0.0 | 2285 |
| MS.gene41737.t1 | MTR_8g085950 | 79.605 | 1113 | 222 | 3 | 7 | 1118 | 9 | 1117 | 0.0 | 1755 |
| MS.gene41737.t1 | MTR_2g006750 | 25.749 | 1068 | 700 | 24 | 19 | 1065 | 2 | 997 | 1.39e-88 | 309 |
| MS.gene41737.t1 | MTR_3g064930 | 27.495 | 1022 | 648 | 36 | 19 | 1013 | 77 | 1032 | 9.04e-75 | 268 |
| MS.gene41737.t1 | MTR_3g064980 | 25.353 | 1061 | 726 | 25 | 43 | 1087 | 103 | 1113 | 1.36e-72 | 263 |
| MS.gene41737.t1 | MTR_3g064910 | 45.532 | 235 | 126 | 1 | 884 | 1118 | 529 | 761 | 8.30e-62 | 226 |
| MS.gene41737.t1 | MTR_3g064910 | 28.333 | 540 | 351 | 17 | 37 | 552 | 48 | 575 | 4.84e-46 | 178 |
| MS.gene41737.t1 | MTR_3g064940 | 24.403 | 922 | 600 | 27 | 25 | 909 | 64 | 925 | 3.57e-42 | 168 |
| MS.gene41737.t1 | MTR_3g065010 | 24.554 | 896 | 577 | 22 | 38 | 911 | 103 | 921 | 4.46e-42 | 167 |
| MS.gene41737.t1 | MTR_7g098920 | 59.677 | 124 | 16 | 3 | 893 | 1012 | 6 | 99 | 6.08e-36 | 133 |
| MS.gene41737.t1 | MTR_3g064935 | 44.898 | 98 | 53 | 1 | 990 | 1087 | 38 | 134 | 1.09e-20 | 90.1 |
| MS.gene41737.t1 | MTR_8g099855 | 37.500 | 144 | 72 | 3 | 945 | 1087 | 258 | 384 | 3.73e-20 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41737.t1 | AT5G19820 | 74.373 | 1116 | 280 | 4 | 4 | 1118 | 6 | 1116 | 0.0 | 1714 |
| MS.gene41737.t1 | AT4G27640 | 24.748 | 1091 | 745 | 22 | 22 | 1095 | 5 | 1036 | 2.29e-83 | 294 |
| MS.gene41737.t1 | AT2G16950 | 22.149 | 605 | 378 | 22 | 70 | 615 | 67 | 637 | 6.57e-11 | 67.4 |
Find 282 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGCTCTTTCATGCTTTC+TGG | -0.040025 | 7.2:-22057837 | None:intergenic |
| TGTAAAGCTTCCACCAAATT+TGG | 0.127943 | 7.2:-22056804 | None:intergenic |
| TCTTCTCAGGCAGCTGTTTA+TGG | 0.130988 | 7.2:+22059118 | MS.gene41737:intron |
| GTGGACATGGTGCGTATTTC+GGG | 0.145864 | 7.2:-22051069 | None:intergenic |
| TGATTATATAATTCCAAATT+TGG | 0.146239 | 7.2:+22056791 | MS.gene41737:CDS |
| CTTCATGGAAGTAAAATTTA+AGG | 0.147973 | 7.2:-22056561 | None:intergenic |
| GTGAGAGAGTTTGAGGATTA+AGG | 0.166281 | 7.2:-22051025 | None:intergenic |
| CATTTGTAATATTAGGTTTC+AGG | 0.184402 | 7.2:+22052276 | MS.gene41737:intron |
| AAATAAGGTACTAAAATATC+TGG | 0.209428 | 7.2:-22054035 | None:intergenic |
| TTATGTTGCTACAGATATTA+TGG | 0.209828 | 7.2:+22058942 | MS.gene41737:intron |
| TGAATTGCTGCCAACTTATT+TGG | 0.239895 | 7.2:+22052756 | MS.gene41737:CDS |
| GGGCAATTGTCCACAGATTT+GGG | 0.246478 | 7.2:+22053194 | MS.gene41737:CDS |
| GGTGGACATGGTGCGTATTT+CGG | 0.253645 | 7.2:-22051070 | None:intergenic |
| TGGGCAATTGTCCACAGATT+TGG | 0.253832 | 7.2:+22053193 | MS.gene41737:CDS |
| TCTCTGATGACCTCGCTTCT+TGG | 0.257887 | 7.2:+22051271 | MS.gene41737:CDS |
| GCGCAATTGGCGCATTATAT+TGG | 0.268215 | 7.2:+22051372 | MS.gene41737:CDS |
| GGACATGAGGTTTGTGATTA+GGG | 0.272045 | 7.2:-22050935 | None:intergenic |
| AGCATCAAAGTCCTCTTCTT+TGG | 0.274091 | 7.2:-22057864 | None:intergenic |
| GAGGCGAGAGAGCGTGCTCC+TGG | 0.277486 | 7.2:+22052526 | MS.gene41737:CDS |
| TTGACTGAGGCATTGAATTC+TGG | 0.283347 | 7.2:+22052325 | MS.gene41737:CDS |
| GCAGGTGATGACAAAGAATT+TGG | 0.302259 | 7.2:+22053094 | MS.gene41737:intron |
| CTGCCTTCCTAACTTCTTCA+TGG | 0.303161 | 7.2:-22056576 | None:intergenic |
| CTAAGTTGCTTGCCTATAAA+AGG | 0.312335 | 7.2:+22060412 | MS.gene41737:CDS |
| CTCACAATCCCATCCAAATA+AGG | 0.313213 | 7.2:-22054050 | None:intergenic |
| CTTCTCAGGCAGCTGTTTAT+GGG | 0.313525 | 7.2:+22059119 | MS.gene41737:intron |
| GTTAGGAAGGCAGCAGCTTC+AGG | 0.319059 | 7.2:+22056586 | MS.gene41737:CDS |
| GCACAAATGGCTCTAATTCT+AGG | 0.322349 | 7.2:+22050889 | MS.gene41737:CDS |
| TTTACTTCCATGAAGAAGTT+AGG | 0.325716 | 7.2:+22056569 | MS.gene41737:CDS |
| TGGAAAGATATTGATTGTTA+TGG | 0.326132 | 7.2:-22060641 | None:intergenic |
| TGCTAGATTGGCGATTGCTT+GGG | 0.326637 | 7.2:+22058036 | MS.gene41737:intron |
| GAGTTTGAGGATTAAGGAAT+CGG | 0.328747 | 7.2:-22051019 | None:intergenic |
| GGTTATTTATCTCAGGTATC+AGG | 0.333202 | 7.2:+22057743 | MS.gene41737:intron |
| AGATCAGATAAAGAACTTAT+AGG | 0.333704 | 7.2:+22060618 | MS.gene41737:intron |
| ATGGTGCGTATTTCGGGGTT+AGG | 0.335218 | 7.2:-22051063 | None:intergenic |
| GCCCACCGCACCCGAGGGTT+TGG | 0.335815 | 7.2:-22053155 | None:intergenic |
| AGATAGACTTTCAATTGCTT+TGG | 0.339365 | 7.2:+22052705 | MS.gene41737:CDS |
| CCTGTCACGGTCGGATGAAT+TGG | 0.340721 | 7.2:-22051523 | None:intergenic |
| TTGGGAACGTTGGTCGTTGA+TGG | 0.340981 | 7.2:-22050959 | None:intergenic |
| TTCCAATGATGCTAGGCTTC+AGG | 0.345498 | 7.2:+22051329 | MS.gene41737:CDS |
| CAAACTTCTTGTACTCCTTC+AGG | 0.347009 | 7.2:+22054073 | MS.gene41737:CDS |
| CAGGCAGCTGTTTATGGGGT+TGG | 0.353036 | 7.2:+22059124 | MS.gene41737:intron |
| CGGAGAGTGGATTGAGTTGA+AGG | 0.356862 | 7.2:-22051156 | None:intergenic |
| AGATTTGGGGCCAGACTTGC+AGG | 0.357142 | 7.2:+22053208 | MS.gene41737:CDS |
| GATAGACTTTCAATTGCTTT+GGG | 0.359150 | 7.2:+22052706 | MS.gene41737:CDS |
| TGGTGCGTATTTCGGGGTTA+GGG | 0.360152 | 7.2:-22051062 | None:intergenic |
| CTCCTGAAGCCTAGCATCAT+TGG | 0.367008 | 7.2:-22051331 | None:intergenic |
| GAACTTCTCATTGAGCTTGC+TGG | 0.367665 | 7.2:+22052376 | MS.gene41737:CDS |
| AACTTCTCATTGAGCTTGCT+GGG | 0.371868 | 7.2:+22052377 | MS.gene41737:CDS |
| GATAATGCTGTTTCAGCTCT+TGG | 0.372944 | 7.2:+22059468 | MS.gene41737:CDS |
| GTTGGTGTCTGTGCCGAGTT+TGG | 0.373481 | 7.2:+22059142 | MS.gene41737:CDS |
| GTTGCTTGTGTTCGCGCAAT+TGG | 0.377292 | 7.2:+22051359 | MS.gene41737:CDS |
| TGGATTTGATTGGTTCTTGA+TGG | 0.378559 | 7.2:-22051200 | None:intergenic |
| TTCATGCTTTCTGGATGAAC+TGG | 0.379901 | 7.2:-22057828 | None:intergenic |
| TTTGCTGAAGACAACAGTTC+TGG | 0.380717 | 7.2:-22056708 | None:intergenic |
| CGATCAAAACCAGGCACAAA+TGG | 0.382121 | 7.2:+22050876 | MS.gene41737:CDS |
| TTATGCTATCACGGTGGAAC+TGG | 0.382701 | 7.2:-22059500 | None:intergenic |
| GGAGGAGGTGAGAGAGTTTG+AGG | 0.383052 | 7.2:-22051032 | None:intergenic |
| TGGACATGAGGTTTGTGATT+AGG | 0.384621 | 7.2:-22050936 | None:intergenic |
| TGGGCGGCTATAAATGCAAT+TGG | 0.394396 | 7.2:+22053173 | MS.gene41737:CDS |
| ATATCACCACTTAGTGCTTC+CGG | 0.396365 | 7.2:+22053235 | MS.gene41737:CDS |
| CTGTTGGAAAAGAGAAGTTC+AGG | 0.396414 | 7.2:+22054837 | MS.gene41737:CDS |
| ATTATGTGCGGGGACTGATT+TGG | 0.397041 | 7.2:+22060795 | MS.gene41737:CDS |
| CGGGGTTAGGGGAAGTGTGG+AGG | 0.397844 | 7.2:-22051050 | None:intergenic |
| TGATATTTATCCTGCAAGTC+TGG | 0.398002 | 7.2:-22053218 | None:intergenic |
| GAAGCTATGCGACACCGTTT+CGG | 0.399962 | 7.2:+22051230 | MS.gene41737:CDS |
| AGCAATGGAGTGTATTAGTT+TGG | 0.400859 | 7.2:+22054805 | MS.gene41737:CDS |
| TCCAAAACAATTAGGATGAT+AGG | 0.406142 | 7.2:-22060945 | None:intergenic |
| GTCACTGCAACAATCTCAAC+TGG | 0.407046 | 7.2:+22055048 | MS.gene41737:CDS |
| GAGTAGACAATTGAGGAAGT+AGG | 0.408750 | 7.2:-22051401 | None:intergenic |
| TGTGCTAATGAATTTGTTGT+TGG | 0.411222 | 7.2:+22052591 | MS.gene41737:CDS |
| ACTGTTGTCTTCAGCAAAAT+CGG | 0.411583 | 7.2:+22056713 | MS.gene41737:CDS |
| GCATGACCTTCTTTGTTCAA+TGG | 0.413646 | 7.2:+22060459 | MS.gene41737:CDS |
| AGTAGACAATTGAGGAAGTA+GGG | 0.415176 | 7.2:-22051400 | None:intergenic |
| GTGTATTAGTTTGGTAGGTA+TGG | 0.417445 | 7.2:+22054814 | MS.gene41737:CDS |
| CTAGGCTTTGCAAGTGCCTC+GGG | 0.424997 | 7.2:+22055242 | MS.gene41737:CDS |
| GAGACTAGTAACTACGGATT+TGG | 0.426002 | 7.2:+22052670 | MS.gene41737:CDS |
| CGCACCCGAGGGTTTGGATC+AGG | 0.426653 | 7.2:-22053149 | None:intergenic |
| GGTTGCAGGTTGTTCCAGCC+TGG | 0.427510 | 7.2:+22060389 | MS.gene41737:intron |
| TATGTCATCAGGCGTGGGCT+AGG | 0.428774 | 7.2:+22055224 | MS.gene41737:intron |
| GGTTAGGGGAAGTGTGGAGG+AGG | 0.428933 | 7.2:-22051047 | None:intergenic |
| GAAATTTGTGCAAGCATGTT+GGG | 0.429694 | 7.2:+22056926 | MS.gene41737:CDS |
| TTTGGAGCATGTATTATCAA+TGG | 0.431536 | 7.2:+22053112 | MS.gene41737:CDS |
| TTAGTGCTTCCGGCATTAGC+TGG | 0.434177 | 7.2:+22053245 | MS.gene41737:CDS |
| GCTAGGCTTTGCAAGTGCCT+CGG | 0.435027 | 7.2:+22055241 | MS.gene41737:CDS |
| TTCTTAACGATGGATTTGAT+TGG | 0.437781 | 7.2:-22051210 | None:intergenic |
| ATCCAAACCCTCGGGTGCGG+TGG | 0.438594 | 7.2:+22053153 | MS.gene41737:CDS |
| TAGTGCTGCTACTTCCTCTT+CGG | 0.440238 | 7.2:+22051449 | MS.gene41737:CDS |
| GTTCAGGGACGATGCCAAAC+AGG | 0.443445 | 7.2:+22054853 | MS.gene41737:CDS |
| AAAAGAAGCGGAAGCAAGTC+AGG | 0.444656 | 7.2:-22051294 | None:intergenic |
| ACTAATACACTCCATTGCTT+TGG | 0.446076 | 7.2:-22054801 | None:intergenic |
| CTCACCGCAGCATGCCAAGC+AGG | 0.448315 | 7.2:-22052628 | None:intergenic |
| AGAAGAAGGGACTCGCCATT+TGG | 0.448470 | 7.2:+22052477 | MS.gene41737:CDS |
| GGCATGACAAAACCCATGTA+TGG | 0.449433 | 7.2:-22055277 | None:intergenic |
| AGTTTGAGGATTAAGGAATC+GGG | 0.451683 | 7.2:-22051018 | None:intergenic |
| TATAGGCAAGCAACTTAGCC+AGG | 0.454237 | 7.2:-22060407 | None:intergenic |
| GAGAAGAAGAGAACGGAGAG+TGG | 0.454619 | 7.2:-22051169 | None:intergenic |
| CTTGCACAAATTTCTACCTC+TGG | 0.455019 | 7.2:-22056917 | None:intergenic |
| GTGCTAGATTGGCGATTGCT+TGG | 0.457692 | 7.2:+22058035 | MS.gene41737:intron |
| ATCTAGATGAAAAGCAAGTA+AGG | 0.458320 | 7.2:+22057771 | MS.gene41737:CDS |
| CCAATTCATCCGACCGTGAC+AGG | 0.458336 | 7.2:+22051523 | MS.gene41737:CDS |
| CAGTTTGTAAAGAAGTTGTT+TGG | 0.458846 | 7.2:+22052568 | MS.gene41737:CDS |
| CAGGCTTAAGTTGTGCAGAC+TGG | 0.467586 | 7.2:-22055309 | None:intergenic |
| AATAAGGTACTAAAATATCT+GGG | 0.467659 | 7.2:-22054034 | None:intergenic |
| TTTCAACCATTGAACAAAGA+AGG | 0.467766 | 7.2:-22060465 | None:intergenic |
| ATTATCAGAATGCTGTGCAT+TGG | 0.469285 | 7.2:-22059433 | None:intergenic |
| TGGATTGAGTTGAAGGGGAG+AGG | 0.469956 | 7.2:-22051149 | None:intergenic |
| GGCAAGCAACTTAGCCAGGC+TGG | 0.471152 | 7.2:-22060403 | None:intergenic |
| GACTTTCAATTGCTTTGGGC+GGG | 0.473563 | 7.2:+22052710 | MS.gene41737:CDS |
| TTGCAAGCTTCAAGCAAGAA+TGG | 0.473957 | 7.2:-22058975 | None:intergenic |
| GGCAGCAATTCAGACGCAAC+TGG | 0.474296 | 7.2:-22052745 | None:intergenic |
| GCAGGACTTCCTCCCATACA+TGG | 0.476423 | 7.2:+22055264 | MS.gene41737:CDS |
| TGGAAAGCAGATGGTTCAAG+AGG | 0.476999 | 7.2:+22054527 | MS.gene41737:CDS |
| CTTCTACAGAGGCACTTTCA+AGG | 0.478037 | 7.2:+22059388 | MS.gene41737:intron |
| CAGGTTGAAGCTAGGGTAGA+AGG | 0.478075 | 7.2:-22060880 | None:intergenic |
| CTTATTTGGCTGCCTCTGAA+TGG | 0.481987 | 7.2:+22052770 | MS.gene41737:CDS |
| ACTCTCGGGGATAAAAGAAT+AGG | 0.482856 | 7.2:+22056335 | MS.gene41737:CDS |
| AATGTCATCAAATATACAAA+TGG | 0.487724 | 7.2:-22058760 | None:intergenic |
| CTTACTTATGAGCTGCTTCG+CGG | 0.490569 | 7.2:-22058794 | None:intergenic |
| GACGAAAGCTCTTCAAAGAA+AGG | 0.491643 | 7.2:-22058093 | None:intergenic |
| GAATTAGAGCCATTTGTGCC+TGG | 0.493360 | 7.2:-22050885 | None:intergenic |
| GATTCGAAGTGGGTTGAATC+CGG | 0.493509 | 7.2:-22050913 | None:intergenic |
| TTATCAGAATGCTGTGCATT+GGG | 0.497165 | 7.2:-22059432 | None:intergenic |
| AGAAATTTGTGCAAGCATGT+TGG | 0.498176 | 7.2:+22056925 | MS.gene41737:CDS |
| CATATAGGTTGCTTCCACAT+TGG | 0.499173 | 7.2:+22056531 | MS.gene41737:intron |
| AGGTGATTTAATCGAGGCTA+AGG | 0.501348 | 7.2:+22060432 | MS.gene41737:CDS |
| AGGCAAATTGTTGACATTGT+TGG | 0.502918 | 7.2:+22052421 | MS.gene41737:CDS |
| GACCAGTGTCTTGGAGGAGA+AGG | 0.504137 | 7.2:+22056364 | MS.gene41737:CDS |
| TTGCTACGCTGATGAGTTGA+AGG | 0.504595 | 7.2:+22056409 | MS.gene41737:CDS |
| GAGGATTAAGGAATCGGGAT+AGG | 0.504738 | 7.2:-22051013 | None:intergenic |
| AGGCATTAAGACCAGTGTCT+TGG | 0.504923 | 7.2:+22056355 | MS.gene41737:CDS |
| CGCACTGAATGAATGCATAC+AGG | 0.505412 | 7.2:+22056949 | MS.gene41737:CDS |
| TGTGATTAGGGATTCGAAGT+GGG | 0.507731 | 7.2:-22050923 | None:intergenic |
| AGCATTGAAACCATTACTCT+CGG | 0.515898 | 7.2:+22056320 | MS.gene41737:intron |
| ACGATGACCAGGTTGAAGCT+AGG | 0.518865 | 7.2:-22060888 | None:intergenic |
| CATTAAGACCAGTGTCTTGG+AGG | 0.520829 | 7.2:+22056358 | MS.gene41737:CDS |
| AAACCCTCGGGTGCGGTGGG+CGG | 0.521210 | 7.2:+22053157 | MS.gene41737:CDS |
| AGCAAAATCGGCTATAGAGA+AGG | 0.523446 | 7.2:+22056725 | MS.gene41737:CDS |
| CAACAAACTCAATAGCCAAA+TGG | 0.523533 | 7.2:-22052492 | None:intergenic |
| GGAGAGTGGATTGAGTTGAA+GGG | 0.524186 | 7.2:-22051155 | None:intergenic |
| ATGGAGTGTATTAGTTTGGT+AGG | 0.525634 | 7.2:+22054809 | MS.gene41737:CDS |
| AATTGCAGAGGGTTGTTCAA+AGG | 0.526620 | 7.2:+22052828 | MS.gene41737:CDS |
| TCCAAACCCTCGGGTGCGGT+GGG | 0.527222 | 7.2:+22053154 | MS.gene41737:CDS |
| GAATTTGTTGTTGGATGTTG+AGG | 0.527410 | 7.2:+22052600 | MS.gene41737:CDS |
| CAGTCAATGTCTGCATCATG+AGG | 0.527836 | 7.2:-22052309 | None:intergenic |
| TTCTTTGTTCAATGGTTGAA+AGG | 0.529928 | 7.2:+22060467 | MS.gene41737:CDS |
| TTCTCAGGCAGCTGTTTATG+GGG | 0.531178 | 7.2:+22059120 | MS.gene41737:intron |
| AGGCGAGAGAGCGTGCTCCT+GGG | 0.532344 | 7.2:+22052527 | MS.gene41737:CDS |
| GCATTGAAACCATTACTCTC+GGG | 0.533758 | 7.2:+22056321 | MS.gene41737:intron |
| GGGTTACTTCCAATGATGCT+AGG | 0.533828 | 7.2:+22051322 | MS.gene41737:CDS |
| GCTTTGCAAGTGCCTCGGGC+AGG | 0.534139 | 7.2:+22055246 | MS.gene41737:CDS |
| TGGTCAAGAGGCAACTGCAC+AGG | 0.535935 | 7.2:+22052345 | MS.gene41737:CDS |
| GAGGCTGAGTCATTAGAAGA+AGG | 0.539348 | 7.2:+22052463 | MS.gene41737:CDS |
| TCCGGCATTAGCTGGAGCCA+TGG | 0.539722 | 7.2:+22053253 | MS.gene41737:CDS |
| AGCAGAGAGAGCCAAAGAAG+AGG | 0.540126 | 7.2:+22057853 | MS.gene41737:CDS |
| GCGTGAGATGACGACGGAGG+AGG | 0.540424 | 7.2:-22051095 | None:intergenic |
| GAGAGTGGATTGAGTTGAAG+GGG | 0.541926 | 7.2:-22051154 | None:intergenic |
| CATTTCCTGATCCAAACCCT+CGG | 0.542062 | 7.2:+22053144 | MS.gene41737:CDS |
| TAGTAACTACGGATTTGGTC+AGG | 0.542717 | 7.2:+22052675 | MS.gene41737:CDS |
| GGTGCGTATTTCGGGGTTAG+GGG | 0.543193 | 7.2:-22051061 | None:intergenic |
| GCAAAATCGGCTATAGAGAA+GGG | 0.543836 | 7.2:+22056726 | MS.gene41737:CDS |
| GAAAACAGATCCACCAAACT+CGG | 0.543899 | 7.2:-22059155 | None:intergenic |
| ATTTCCTGATCCAAACCCTC+GGG | 0.544085 | 7.2:+22053145 | MS.gene41737:CDS |
| TTGAGGGTGCAACGATGACC+AGG | 0.544184 | 7.2:-22060899 | None:intergenic |
| CGATGACCAGGTTGAAGCTA+GGG | 0.546350 | 7.2:-22060887 | None:intergenic |
| GGTGTCTGTGCCGAGTTTGG+TGG | 0.546933 | 7.2:+22059145 | MS.gene41737:CDS |
| CTGATCCAAACCCTCGGGTG+CGG | 0.549434 | 7.2:+22053150 | MS.gene41737:CDS |
| AATGGCTCTAATTCTAGGAC+CGG | 0.549460 | 7.2:+22050894 | MS.gene41737:CDS |
| AGTTTGGTAGGTATGGCTGT+TGG | 0.550737 | 7.2:+22054821 | MS.gene41737:CDS |
| ACAGCATTCTGATAATGTAA+TGG | 0.552103 | 7.2:+22059440 | MS.gene41737:CDS |
| GGGCGGCTATAAATGCAATT+GGG | 0.552920 | 7.2:+22053174 | MS.gene41737:CDS |
| TCAGAGGCAGCCAAATAAGT+TGG | 0.553225 | 7.2:-22052766 | None:intergenic |
| GGCAATTCTCCTTTCCTCTG+AGG | 0.555040 | 7.2:-22058739 | None:intergenic |
| CTGAGCCACGTTTCCTGCGG+AGG | 0.555443 | 7.2:+22052401 | MS.gene41737:CDS |
| TTGGCATGCTGCGGTGAGCG+AGG | 0.555498 | 7.2:+22052633 | MS.gene41737:CDS |
| TGTCAACAATTTGCCTCCGC+AGG | 0.556267 | 7.2:-22052414 | None:intergenic |
| GAATGAAGAGTAGACAATTG+AGG | 0.556981 | 7.2:-22051408 | None:intergenic |
| GCTGATGTAATTGACACGTC+AGG | 0.557042 | 7.2:-22055328 | None:intergenic |
| AACAACTTCTTTACAAACTG+CGG | 0.559246 | 7.2:-22052565 | None:intergenic |
| TTATATAATTCCAAATTTGG+TGG | 0.559998 | 7.2:+22056794 | MS.gene41737:CDS |
| ATCAGTCGCTGATTCTTCAC+AGG | 0.561950 | 7.2:+22054569 | MS.gene41737:CDS |
| TCCATGGCTCCAGCTAATGC+CGG | 0.563505 | 7.2:-22053254 | None:intergenic |
| TGAGTGTTCAGATGTTCGAC+AGG | 0.565579 | 7.2:+22059001 | MS.gene41737:CDS |
| CTTCCATGAAGAAGTTAGGA+AGG | 0.568668 | 7.2:+22056573 | MS.gene41737:CDS |
| TTTCGGGGTTAGGGGAAGTG+TGG | 0.570235 | 7.2:-22051053 | None:intergenic |
| ATGATGTAGATATTATGTGC+GGG | 0.570591 | 7.2:+22060784 | MS.gene41737:intron |
| GAAAGGGAACTTACAAACAT+AGG | 0.571714 | 7.2:-22058126 | None:intergenic |
| TGAGTTGAAGGGGAGAGGTG+TGG | 0.572248 | 7.2:-22051144 | None:intergenic |
| TGGAAGTAAAATTTAAGGAG+AGG | 0.574089 | 7.2:-22056556 | None:intergenic |
| ATAGCCGCCCACCGCACCCG+AGG | 0.574957 | 7.2:-22053161 | None:intergenic |
| AGCGTGCTCCTGGGATGATG+AGG | 0.575247 | 7.2:+22052536 | MS.gene41737:CDS |
| GCTAGATTGGCGATTGCTTG+GGG | 0.575752 | 7.2:+22058037 | MS.gene41737:intron |
| AGCAGAAGCGAGTTCCGAAA+CGG | 0.576464 | 7.2:-22051244 | None:intergenic |
| CAAGTCTGGCCCCAAATCTG+TGG | 0.576849 | 7.2:-22053204 | None:intergenic |
| GAAGTGCAAGTTGTTGTTGA+GGG | 0.578046 | 7.2:-22060915 | None:intergenic |
| ACCTGTCTTCCAGGAGCCAG+AGG | 0.578090 | 7.2:+22056901 | MS.gene41737:intron |
| GGCATTGAATTCTGGTCAAG+AGG | 0.578146 | 7.2:+22052333 | MS.gene41737:CDS |
| TTCTTCTAATGACTCAGCCT+CGG | 0.578657 | 7.2:-22052461 | None:intergenic |
| AGCCTCGGCAATCTGCAGCA+TGG | 0.581379 | 7.2:-22052446 | None:intergenic |
| CTTCTACCCTAGCTTCAACC+TGG | 0.583452 | 7.2:+22060881 | MS.gene41737:CDS |
| GAAATTGATACTTGCAGCAA+GGG | 0.585035 | 7.2:-22051487 | None:intergenic |
| TATGCTTCGTGCCAAAGCAA+TGG | 0.585169 | 7.2:+22054790 | MS.gene41737:CDS |
| ATGCCAACCTGGTCAATCCA+AGG | 0.585232 | 7.2:-22056443 | None:intergenic |
| GTCGCATAGCTTCTTAACGA+TGG | 0.586119 | 7.2:-22051220 | None:intergenic |
| ACTGCTGGTTATACCTGTCA+CGG | 0.586216 | 7.2:-22051536 | None:intergenic |
| GGCAATTGTCCACAGATTTG+GGG | 0.586673 | 7.2:+22053195 | MS.gene41737:CDS |
| TAGCCGCCCACCGCACCCGA+GGG | 0.589983 | 7.2:-22053160 | None:intergenic |
| AGACTTTCAATTGCTTTGGG+CGG | 0.591625 | 7.2:+22052709 | MS.gene41737:CDS |
| AGGCTGAGTCATTAGAAGAA+GGG | 0.592282 | 7.2:+22052464 | MS.gene41737:CDS |
| TACGCTGATGAGTTGAAGGA+AGG | 0.594226 | 7.2:+22056413 | MS.gene41737:CDS |
| GCATGACAAAACCCATGTAT+GGG | 0.594926 | 7.2:-22055276 | None:intergenic |
| TGATAGCATAAATGCAGCAC+AGG | 0.595998 | 7.2:+22059512 | MS.gene41737:CDS |
| GCACTTGCACAAATTGCAGA+GGG | 0.597196 | 7.2:+22052817 | MS.gene41737:CDS |
| AGCCTTCTCCTCCAAGACAC+TGG | 0.597210 | 7.2:-22056366 | None:intergenic |
| GAGTAACTGACCTCCAACAA+GGG | 0.597739 | 7.2:-22059182 | None:intergenic |
| TGCACTTGCACAAATTGCAG+AGG | 0.597774 | 7.2:+22052816 | MS.gene41737:CDS |
| CAGGACTTCCTCCCATACAT+GGG | 0.597797 | 7.2:+22055265 | MS.gene41737:CDS |
| AGTCAATGTCTGCATCATGA+GGG | 0.598271 | 7.2:-22052308 | None:intergenic |
| AAGACAAAACCTCAGAGGAA+AGG | 0.598498 | 7.2:+22058730 | MS.gene41737:CDS |
| ACGGAGGAGGATGGTGGACA+TGG | 0.599090 | 7.2:-22051082 | None:intergenic |
| TGATCCTGCTTGGCATGCTG+CGG | 0.600005 | 7.2:+22052624 | MS.gene41737:CDS |
| GGAACGTTGGTCGTTGATGG+TGG | 0.600639 | 7.2:-22050956 | None:intergenic |
| TTGTGATTAGGGATTCGAAG+TGG | 0.600736 | 7.2:-22050924 | None:intergenic |
| TGTTGGAAAAGAGAAGTTCA+GGG | 0.601486 | 7.2:+22054838 | MS.gene41737:CDS |
| ATAGAGAAGGGGCAGTCACA+AGG | 0.604230 | 7.2:+22056738 | MS.gene41737:CDS |
| AAGTTGTGCAGACTGGAGCA+AGG | 0.604837 | 7.2:-22055302 | None:intergenic |
| AAACAATTAGGATGATAGGA+TGG | 0.605832 | 7.2:-22060941 | None:intergenic |
| TGTAACATGTAACTCGCGGT+TGG | 0.607384 | 7.2:-22055082 | None:intergenic |
| GGTAACTTCCTCATCATCCC+AGG | 0.608657 | 7.2:-22052544 | None:intergenic |
| GTGCTGCATTTATGCTATCA+CGG | 0.611301 | 7.2:-22059509 | None:intergenic |
| TGTGCAGACTGGAGCAAGGG+AGG | 0.611908 | 7.2:-22055298 | None:intergenic |
| ATTATAGAGTGGAAAGCAGA+TGG | 0.615282 | 7.2:+22054518 | MS.gene41737:intron |
| TGAAGAAAGAGAACTACTCA+AGG | 0.616789 | 7.2:+22057886 | MS.gene41737:CDS |
| ATGTTGAGGATGATCCTGCT+TGG | 0.618105 | 7.2:+22052614 | MS.gene41737:CDS |
| TCAAGAGGCAACTGCACAGG+AGG | 0.618446 | 7.2:+22052348 | MS.gene41737:CDS |
| GGCGTTGAACGATCAAAACC+AGG | 0.620419 | 7.2:+22050867 | MS.gene41737:CDS |
| GGACTGAGCCACGTTTCCTG+CGG | 0.621090 | 7.2:+22052398 | MS.gene41737:CDS |
| ATTTGCCTCCGCAGGAAACG+TGG | 0.621262 | 7.2:-22052406 | None:intergenic |
| ATTGATACTTGCAGCAAGGG+CGG | 0.621696 | 7.2:-22051484 | None:intergenic |
| AATTTGATGAAGATGATGAC+AGG | 0.621774 | 7.2:+22055365 | MS.gene41737:CDS |
| GAGATGACGACGGAGGAGGA+TGG | 0.621924 | 7.2:-22051091 | None:intergenic |
| CGAAATTGATACTTGCAGCA+AGG | 0.622904 | 7.2:-22051488 | None:intergenic |
| TGAGTAACTGACCTCCAACA+AGG | 0.625252 | 7.2:-22059183 | None:intergenic |
| GCTGGTGAGACTAGTAACTA+CGG | 0.626383 | 7.2:+22052664 | MS.gene41737:CDS |
| GTGAGCGAGGATGATGATGC+TGG | 0.627605 | 7.2:+22052646 | MS.gene41737:CDS |
| GAGATGAGAGAAGAAGAGAA+CGG | 0.627726 | 7.2:-22051176 | None:intergenic |
| AGTTGTGCAGACTGGAGCAA+GGG | 0.630199 | 7.2:-22055301 | None:intergenic |
| GTCAATGTCTGCATCATGAG+GGG | 0.630206 | 7.2:-22052307 | None:intergenic |
| TGAAGTGCAAGTTGTTGTTG+AGG | 0.630485 | 7.2:-22060916 | None:intergenic |
| GGTCGTTGATGGTGGACATG+AGG | 0.631868 | 7.2:-22050948 | None:intergenic |
| ATGACGACGGAGGAGGATGG+TGG | 0.632074 | 7.2:-22051088 | None:intergenic |
| TATGATGTAGATATTATGTG+CGG | 0.632192 | 7.2:+22060783 | MS.gene41737:intron |
| GCAAGTCAGGCCAAGAAGCG+AGG | 0.632791 | 7.2:-22051281 | None:intergenic |
| CATTGAAACCATTACTCTCG+GGG | 0.635821 | 7.2:+22056322 | MS.gene41737:CDS |
| TGGACATGGTGCGTATTTCG+GGG | 0.642855 | 7.2:-22051068 | None:intergenic |
| AAAGTGCAAACCTGTACTCG+AGG | 0.643138 | 7.2:-22053290 | None:intergenic |
| CTGGTTATACCTGTCACGGT+CGG | 0.644881 | 7.2:-22051532 | None:intergenic |
| CAAAATCGGCTATAGAGAAG+GGG | 0.649523 | 7.2:+22056727 | MS.gene41737:CDS |
| TGATGTAGATATTATGTGCG+GGG | 0.651326 | 7.2:+22060785 | MS.gene41737:intron |
| TGCCATGCTGCAGATTGCCG+AGG | 0.655913 | 7.2:+22052444 | MS.gene41737:CDS |
| TGACAAAACCCATGTATGGG+AGG | 0.656396 | 7.2:-22055273 | None:intergenic |
| ATAAGGTACTAAAATATCTG+GGG | 0.656506 | 7.2:-22054033 | None:intergenic |
| TTTGGTGGAAGCTTTACACA+AGG | 0.658617 | 7.2:+22056809 | MS.gene41737:CDS |
| TATAAAAGGTGATTTAATCG+AGG | 0.661157 | 7.2:+22060426 | MS.gene41737:CDS |
| CTAATGCCGGAAGCACTAAG+TGG | 0.661368 | 7.2:-22053241 | None:intergenic |
| AGTAACTGACCTCCAACAAG+GGG | 0.665562 | 7.2:-22059181 | None:intergenic |
| AAAGCAAGTAAGGAGCATTG+TGG | 0.670200 | 7.2:+22057781 | MS.gene41737:CDS |
| GGAAAGCAGATGGTTCAAGA+GGG | 0.674345 | 7.2:+22054528 | MS.gene41737:CDS |
| TACTTGTAACATGTAACTCG+CGG | 0.676630 | 7.2:-22055086 | None:intergenic |
| AGATGAAAGAGTCGTCGTGG+TGG | 0.677354 | 7.2:-22051119 | None:intergenic |
| GTTTGTTGTTACACTTGCTG+AGG | 0.679801 | 7.2:+22052507 | MS.gene41737:CDS |
| GGCAATACGAACATCCGAAG+AGG | 0.686647 | 7.2:-22051463 | None:intergenic |
| GGGTAAAGACAAAACCTCAG+AGG | 0.692614 | 7.2:+22058725 | MS.gene41737:intron |
| TTTAAGGAGAGGAACCAATG+TGG | 0.693314 | 7.2:-22056545 | None:intergenic |
| CAACTGAACAAACTGTGAGT+CGG | 0.697226 | 7.2:+22060818 | MS.gene41737:CDS |
| GGCGCGTGAGATGACGACGG+AGG | 0.701509 | 7.2:-22051098 | None:intergenic |
| CATGATGCAGACATTGACTG+AGG | 0.701645 | 7.2:+22052312 | MS.gene41737:CDS |
| ATGGGAGGAAGTCCTGCCCG+AGG | 0.705946 | 7.2:-22055258 | None:intergenic |
| CAAGTGCAACGAGTGCAGCA+TGG | 0.707450 | 7.2:-22052801 | None:intergenic |
| GTTGAAGCTAGGGTAGAAGG+CGG | 0.717344 | 7.2:-22060877 | None:intergenic |
| GATAGATGAAAGAGTCGTCG+TGG | 0.754182 | 7.2:-22051122 | None:intergenic |
| GGTGGCGCGTGAGATGACGA+CGG | 0.767695 | 7.2:-22051101 | None:intergenic |
| CTGCATTTATGCTATCACGG+TGG | 0.809952 | 7.2:-22059506 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 22050865 | 22060957 | 22050865 | ID=MS.gene41737 |
| chr7.2 | mRNA | 22050865 | 22060957 | 22050865 | ID=MS.gene41737.t1;Parent=MS.gene41737 |
| chr7.2 | exon | 22050865 | 22051544 | 22050865 | ID=MS.gene41737.t1.exon1;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22050865 | 22051544 | 22050865 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22052291 | 22052849 | 22052291 | ID=MS.gene41737.t1.exon2;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22052291 | 22052849 | 22052291 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22053098 | 22053301 | 22053098 | ID=MS.gene41737.t1.exon3;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22053098 | 22053301 | 22053098 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22053990 | 22054094 | 22053990 | ID=MS.gene41737.t1.exon4;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22053990 | 22054094 | 22053990 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22054525 | 22054590 | 22054525 | ID=MS.gene41737.t1.exon5;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22054525 | 22054590 | 22054525 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22054710 | 22054874 | 22054710 | ID=MS.gene41737.t1.exon6;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22054710 | 22054874 | 22054710 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22055031 | 22055105 | 22055031 | ID=MS.gene41737.t1.exon7;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22055031 | 22055105 | 22055031 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22055235 | 22055386 | 22055235 | ID=MS.gene41737.t1.exon8;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22055235 | 22055386 | 22055235 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22056322 | 22056457 | 22056322 | ID=MS.gene41737.t1.exon9;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22056322 | 22056457 | 22056322 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22056538 | 22056607 | 22056538 | ID=MS.gene41737.t1.exon10;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22056538 | 22056607 | 22056538 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22056703 | 22056830 | 22056703 | ID=MS.gene41737.t1.exon11;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22056703 | 22056830 | 22056703 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22056914 | 22056970 | 22056914 | ID=MS.gene41737.t1.exon12;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22056914 | 22056970 | 22056914 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22057758 | 22057943 | 22057758 | ID=MS.gene41737.t1.exon13;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22057758 | 22057943 | 22057758 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22058042 | 22058134 | 22058042 | ID=MS.gene41737.t1.exon14;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22058042 | 22058134 | 22058042 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22058726 | 22058811 | 22058726 | ID=MS.gene41737.t1.exon15;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22058726 | 22058811 | 22058726 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22058956 | 22059022 | 22058956 | ID=MS.gene41737.t1.exon16;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22058956 | 22059022 | 22058956 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22059127 | 22059193 | 22059127 | ID=MS.gene41737.t1.exon17;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22059127 | 22059193 | 22059127 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22059397 | 22059533 | 22059397 | ID=MS.gene41737.t1.exon18;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22059397 | 22059533 | 22059397 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22060397 | 22060488 | 22060397 | ID=MS.gene41737.t1.exon19;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22060397 | 22060488 | 22060397 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22060620 | 22060686 | 22060620 | ID=MS.gene41737.t1.exon20;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22060620 | 22060686 | 22060620 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| chr7.2 | exon | 22060793 | 22060957 | 22060793 | ID=MS.gene41737.t1.exon21;Parent=MS.gene41737.t1 |
| chr7.2 | CDS | 22060793 | 22060957 | 22060793 | ID=cds.MS.gene41737.t1;Parent=MS.gene41737.t1 |
| Gene Sequence |
| Protein sequence |