AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41821

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41821.t1 MTR_7g086960 95.355 366 7 2 1 366 1 356 0.0 703
MS.gene41821.t1 MTR_6g027370 50.152 329 129 7 34 362 52 345 2.51e-82 255
MS.gene41821.t1 MTR_4g082040 40.984 366 133 9 64 363 78 426 1.19e-74 238
MS.gene41821.t1 MTR_5g041570 62.130 169 58 1 84 252 127 289 8.92e-71 228
MS.gene41821.t1 MTR_3g089045 41.356 295 146 4 86 366 11 292 1.03e-60 197
MS.gene41821.t1 MTR_6g074860 73.214 112 30 0 88 199 1 112 1.31e-60 195
MS.gene41821.t1 MTR_6g027360 45.126 277 106 9 86 361 74 305 2.43e-60 197
MS.gene41821.t1 MTR_6g027340 57.143 119 51 0 90 208 15 133 3.61e-46 157
MS.gene41821.t1 MTR_4g019370 58.416 101 42 0 91 191 38 138 2.50e-39 143
MS.gene41821.t1 MTR_5g016510 44.138 145 72 2 91 235 5 140 1.30e-37 137
MS.gene41821.t1 MTR_4g094982 55.446 101 45 0 91 191 5 105 4.85e-37 135
MS.gene41821.t1 MTR_3g101290 55.446 101 45 0 91 191 37 137 5.91e-36 130
MS.gene41821.t1 MTR_1g026870 44.444 135 70 2 61 191 52 185 2.01e-32 129
MS.gene41821.t1 MTR_3g110028 42.963 135 72 2 61 191 52 185 3.31e-32 128
MS.gene41821.t1 MTR_6g015455 50.495 101 50 0 91 191 5 105 3.81e-32 128
MS.gene41821.t1 MTR_7g061330 53.465 101 47 0 91 191 113 213 6.63e-32 126
MS.gene41821.t1 MTR_7g461410 53.465 101 47 0 91 191 113 213 6.63e-32 126
MS.gene41821.t1 MTR_7g061330 53.465 101 47 0 91 191 77 177 1.30e-31 125
MS.gene41821.t1 MTR_5g082910 52.632 95 45 0 91 185 19 113 5.08e-31 119
MS.gene41821.t1 MTR_3g463400 52.941 102 48 0 91 192 133 234 1.43e-30 121
MS.gene41821.t1 MTR_5g070020 50.943 106 52 0 86 191 117 222 1.12e-29 117
MS.gene41821.t1 MTR_3g077650 38.636 176 102 4 91 263 181 353 4.10e-29 117
MS.gene41821.t1 MTR_5g049190 49.020 102 52 0 91 192 19 120 2.74e-28 110
MS.gene41821.t1 MTR_7g035350 34.112 214 119 5 94 291 228 435 3.40e-28 114
MS.gene41821.t1 MTR_7g037260 49.505 101 51 0 91 191 145 245 3.21e-27 110
MS.gene41821.t1 MTR_7g451170 39.583 144 76 2 50 191 157 291 5.80e-27 110
MS.gene41821.t1 MTR_4g105660 31.746 189 118 2 28 216 128 305 2.28e-26 109
MS.gene41821.t1 MTR_3g461490 46.078 102 54 1 91 191 14 115 3.16e-26 107
MS.gene41821.t1 MTR_3g052450 44.545 110 60 1 91 199 42 151 3.62e-26 109
MS.gene41821.t1 MTR_5g010650 52.174 92 44 0 94 185 113 204 3.89e-26 109
MS.gene41821.t1 MTR_0008s0390 48.039 102 52 1 91 191 15 116 4.64e-26 105
MS.gene41821.t1 MTR_3g052430 44.545 110 60 1 91 199 43 152 8.73e-26 108
MS.gene41821.t1 MTR_4g088015 48.039 102 52 1 91 192 221 321 1.03e-25 107
MS.gene41821.t1 MTR_0008s0470 48.039 102 52 1 91 191 15 116 1.43e-25 104
MS.gene41821.t1 MTR_2g089420 34.682 173 106 4 91 261 13 180 1.86e-25 107
MS.gene41821.t1 MTR_0251s0050 37.500 144 87 2 91 231 15 158 4.06e-25 103
MS.gene41821.t1 MTR_2g089450 47.059 102 51 2 91 190 14 114 4.27e-25 102
MS.gene41821.t1 MTR_1g100653 43.810 105 58 1 91 194 14 118 5.10e-25 103
MS.gene41821.t1 MTR_1g100667 46.602 103 52 2 91 191 15 116 8.48e-25 102
MS.gene41821.t1 MTR_5g042030 45.098 102 55 1 91 191 9 110 1.61e-24 102
MS.gene41821.t1 MTR_8g060940 48.000 100 51 1 91 189 9 108 2.03e-24 100
MS.gene41821.t1 MTR_8g042410 40.602 133 76 2 68 199 18 148 3.70e-24 103
MS.gene41821.t1 MTR_7g450950 43.103 116 57 1 71 186 146 252 3.75e-24 102
MS.gene41821.t1 MTR_7g037130 48.958 96 49 0 91 186 145 240 3.90e-24 102
MS.gene41821.t1 MTR_2g067420 48.454 97 49 1 91 186 16 112 4.25e-24 101
MS.gene41821.t1 MTR_5g079220 44.118 102 56 1 91 191 23 124 5.13e-24 100
MS.gene41821.t1 MTR_6g055910 42.718 103 56 2 91 191 16 117 9.26e-24 99.8
MS.gene41821.t1 MTR_7g017260 40.496 121 69 1 74 191 10 130 1.09e-23 99.4
MS.gene41821.t1 MTR_3g074520 43.103 116 58 3 83 191 1 115 1.26e-23 100
MS.gene41821.t1 MTR_5g078860 31.818 220 119 5 91 287 9 220 1.29e-23 99.8
MS.gene41821.t1 MTR_3g011610 42.727 110 62 1 91 199 39 148 1.42e-23 102
MS.gene41821.t1 MTR_4g100720 41.748 103 59 1 90 191 14 116 1.94e-23 95.9
MS.gene41821.t1 MTR_4g091490 46.078 102 54 1 91 191 15 116 2.71e-23 99.8
MS.gene41821.t1 MTR_0001s0360 43.137 102 57 1 91 191 9 110 3.05e-23 97.4
MS.gene41821.t1 MTR_1g057980 47.872 94 49 0 91 184 80 173 3.11e-23 98.6
MS.gene41821.t1 MTR_1g085640 39.344 122 73 1 85 205 8 129 4.95e-23 99.4
MS.gene41821.t1 MTR_2g088170 45.238 126 62 3 76 199 20 140 5.10e-23 100
MS.gene41821.t1 MTR_8g017440 42.241 116 59 3 83 191 1 115 5.81e-23 98.6
MS.gene41821.t1 MTR_1g043080 43.137 102 57 1 91 191 14 115 6.10e-23 96.7
MS.gene41821.t1 MTR_5g078800 43.137 102 57 1 91 191 9 110 6.23e-23 97.1
MS.gene41821.t1 MTR_7g115650 45.098 102 55 1 91 191 14 115 7.52e-23 95.5
MS.gene41821.t1 MTR_7g110830 38.525 122 74 1 85 205 8 129 7.83e-23 98.6
MS.gene41821.t1 MTR_4g105130 36.719 128 80 1 91 217 14 141 8.87e-23 98.2
MS.gene41821.t1 MTR_1g076150 44.660 103 54 2 91 191 14 115 9.48e-23 96.3
MS.gene41821.t1 MTR_5g079290 42.157 102 58 1 91 191 19 120 9.90e-23 96.3
MS.gene41821.t1 MTR_3g077110 39.535 129 73 3 91 215 14 141 1.20e-22 97.8
MS.gene41821.t1 MTR_0063s0090 37.903 124 69 3 91 212 14 131 1.56e-22 95.1
MS.gene41821.t1 MTR_2g011660 44.118 102 56 1 91 191 15 116 1.97e-22 97.1
MS.gene41821.t1 MTR_2g089620 46.078 102 54 1 91 191 14 115 2.20e-22 96.7
MS.gene41821.t1 MTR_6g009430 43.137 102 57 1 91 191 14 115 2.36e-22 96.7
MS.gene41821.t1 MTR_2g064160 42.157 102 58 1 91 191 13 114 2.42e-22 96.3
MS.gene41821.t1 MTR_5g078910 42.157 102 58 1 91 191 9 110 2.62e-22 95.9
MS.gene41821.t1 MTR_4g063100 42.342 111 60 3 87 195 5 113 2.76e-22 95.1
MS.gene41821.t1 MTR_1g021230 43.636 110 61 1 91 199 59 168 3.06e-22 97.8
MS.gene41821.t1 MTR_1g085040 38.211 123 73 2 85 205 8 129 3.30e-22 97.1
MS.gene41821.t1 MTR_1g083630 36.765 136 85 1 91 225 14 149 3.72e-22 98.2
MS.gene41821.t1 MTR_1g112760 38.983 118 69 2 91 206 15 131 4.75e-22 93.6
MS.gene41821.t1 MTR_5g010020 43.519 108 55 2 83 184 1 108 7.14e-22 95.5
MS.gene41821.t1 MTR_5g078950 43.299 97 54 1 91 186 9 105 9.01e-22 94.0
MS.gene41821.t1 MTR_5g014990 41.964 112 58 3 91 195 14 125 9.47e-22 94.7
MS.gene41821.t1 MTR_5g079670 41.748 103 59 1 90 191 12 114 9.83e-22 92.4
MS.gene41821.t1 MTR_8g017540 36.364 143 71 4 68 191 20 161 1.32e-21 95.5
MS.gene41821.t1 MTR_1g062940 33.333 183 109 5 91 270 8 180 1.39e-21 92.0
MS.gene41821.t1 MTR_1g110460 40.000 105 62 1 91 194 28 132 1.78e-21 94.0
MS.gene41821.t1 MTR_4g073420 35.152 165 90 5 83 231 1 164 1.78e-21 93.6
MS.gene41821.t1 MTR_4g097570 45.918 98 50 2 91 185 14 111 1.96e-21 93.6
MS.gene41821.t1 MTR_2g099740 43.119 109 54 3 83 184 1 108 2.11e-21 95.1
MS.gene41821.t1 MTR_4g065017 42.157 102 58 1 91 191 19 120 2.13e-21 94.0
MS.gene41821.t1 MTR_8g095390 39.130 115 64 2 83 191 1 115 2.25e-21 93.6
MS.gene41821.t1 MTR_4g125520 39.130 115 64 2 83 191 1 115 2.32e-21 93.6
MS.gene41821.t1 MTR_2g097910 43.689 103 55 2 91 191 22 123 2.43e-21 93.6
MS.gene41821.t1 MTR_5g007370 43.689 103 55 2 91 191 14 115 2.46e-21 93.2
MS.gene41821.t1 MTR_5g029840 39.130 115 64 2 83 191 1 115 2.91e-21 93.6
MS.gene41821.t1 MTR_7g096930 42.157 102 58 1 91 191 14 115 3.62e-21 92.4
MS.gene41821.t1 MTR_8g098860 41.509 106 61 1 91 195 14 119 3.94e-21 93.2
MS.gene41821.t1 MTR_1g017000 42.718 103 57 2 91 191 14 116 3.99e-21 91.7
MS.gene41821.t1 MTR_7g010210 38.889 108 65 1 91 197 14 121 4.34e-21 93.2
MS.gene41821.t1 MTR_3g103570 39.496 119 66 3 91 203 14 132 4.71e-21 93.2
MS.gene41821.t1 MTR_4g082230 40.000 115 63 2 83 191 1 115 5.61e-21 94.0
MS.gene41821.t1 MTR_4g057635 44.231 104 54 3 91 191 14 116 5.69e-21 92.8
MS.gene41821.t1 MTR_7g010210 40.196 102 60 1 91 191 14 115 5.88e-21 91.7
MS.gene41821.t1 MTR_7g111290 42.718 103 56 2 85 185 8 109 6.19e-21 93.6
MS.gene41821.t1 MTR_0247s0040 45.263 95 51 1 91 184 9 103 6.33e-21 89.4
MS.gene41821.t1 MTR_2g096380 33.974 156 91 4 91 244 8 153 8.13e-21 90.5
MS.gene41821.t1 MTR_5g062790 44.898 98 52 2 91 186 11 108 8.48e-21 92.0
MS.gene41821.t1 MTR_1g086530 33.974 156 95 5 91 241 35 187 8.82e-21 91.3
MS.gene41821.t1 MTR_8g017390 41.026 117 60 4 83 191 1 116 1.13e-20 93.6
MS.gene41821.t1 MTR_8g006470 45.714 105 55 2 91 193 12 116 1.38e-20 90.9
MS.gene41821.t1 MTR_4g097570 45.361 97 51 2 91 185 14 110 1.53e-20 90.9
MS.gene41821.t1 MTR_8g017500 42.718 103 56 2 91 191 14 115 1.64e-20 91.7
MS.gene41821.t1 MTR_1g043050 41.176 102 59 1 91 191 14 115 1.77e-20 90.1
MS.gene41821.t1 MTR_4g478180 41.748 103 57 2 91 191 15 116 1.81e-20 91.7
MS.gene41821.t1 MTR_0008s0280 41.237 97 54 2 91 185 14 109 1.85e-20 89.4
MS.gene41821.t1 MTR_0197s0010 43.000 100 54 2 94 191 6 104 1.98e-20 89.4
MS.gene41821.t1 MTR_7g117730 36.134 119 70 2 83 195 1 119 2.11e-20 89.7
MS.gene41821.t1 MTR_1g073170 41.905 105 58 2 91 193 22 125 2.12e-20 89.7
MS.gene41821.t1 MTR_1g017140 41.748 103 58 2 91 191 14 116 2.18e-20 91.3
MS.gene41821.t1 MTR_3g028740 42.727 110 61 2 83 191 17 125 2.30e-20 91.3
MS.gene41821.t1 MTR_8g020490 37.500 112 69 1 87 197 6 117 2.34e-20 89.7
MS.gene41821.t1 MTR_8g027345 36.220 127 73 3 76 198 3 125 2.45e-20 90.5
MS.gene41821.t1 MTR_3g083540 37.069 116 72 1 91 205 43 158 2.66e-20 90.5
MS.gene41821.t1 MTR_4g082290 41.026 117 64 2 76 191 3 115 2.79e-20 91.7
MS.gene41821.t1 MTR_3g097450 32.759 174 89 6 83 248 1 154 3.03e-20 90.1
MS.gene41821.t1 MTR_8g017340 43.810 105 55 3 90 191 13 116 3.98e-20 92.0
MS.gene41821.t1 MTR_2g095520 44.898 98 52 2 91 186 14 111 4.04e-20 90.1
MS.gene41821.t1 MTR_6g055910 48.529 68 35 0 124 191 21 88 4.28e-20 89.0
MS.gene41821.t1 MTR_7g102110 39.655 116 63 3 83 191 1 116 4.29e-20 89.4
MS.gene41821.t1 MTR_6g012180 41.237 97 56 1 91 186 14 110 4.74e-20 90.1
MS.gene41821.t1 MTR_6g012690 41.026 117 64 2 76 191 3 115 4.97e-20 90.5
MS.gene41821.t1 MTR_5g079120 37.302 126 65 2 91 215 63 175 5.73e-20 89.7
MS.gene41821.t1 MTR_4g485530 42.268 97 53 2 90 184 13 108 6.59e-20 87.0
MS.gene41821.t1 MTR_5g088080 41.905 105 56 3 91 193 14 115 7.45e-20 88.6
MS.gene41821.t1 MTR_5g088150 41.905 105 56 3 91 193 14 115 7.45e-20 88.6
MS.gene41821.t1 MTR_5g488210 41.905 105 56 3 91 193 14 115 7.45e-20 88.6
MS.gene41821.t1 MTR_5g078930 44.681 94 51 1 94 186 14 107 7.92e-20 87.4
MS.gene41821.t1 MTR_5g088610 39.091 110 63 3 91 198 11 118 8.20e-20 89.7
MS.gene41821.t1 MTR_7g035075 26.738 187 122 2 91 276 16 188 8.51e-20 87.0
MS.gene41821.t1 MTR_7g087130 40.541 111 61 2 82 191 9 115 9.19e-20 89.4
MS.gene41821.t1 MTR_5g088640 42.857 98 54 2 91 186 14 111 1.03e-19 88.2
MS.gene41821.t1 MTR_5g488170 42.857 98 54 2 91 186 14 111 1.28e-19 87.4
MS.gene41821.t1 MTR_4g029540 44.643 112 57 3 84 193 8 116 2.01e-19 87.8
MS.gene41821.t1 MTR_0140s0030 39.216 102 61 1 91 191 15 116 2.02e-19 88.6
MS.gene41821.t1 MTR_0489s0020 39.216 102 61 1 91 191 15 116 2.02e-19 88.6
MS.gene41821.t1 MTR_7g011170 40.678 118 63 3 76 191 3 115 2.16e-19 87.8
MS.gene41821.t1 MTR_0193s0090 32.237 152 98 2 91 237 9 160 2.26e-19 85.9
MS.gene41821.t1 MTR_3g039990 38.739 111 63 2 82 191 10 116 2.38e-19 87.8
MS.gene41821.t1 MTR_8g017350 40.171 117 61 4 83 191 1 116 3.12e-19 89.7
MS.gene41821.t1 MTR_7g061550 39.286 112 65 1 86 194 2 113 5.14e-19 87.4
MS.gene41821.t1 MTR_1g045610 43.000 100 54 2 87 184 19 117 5.16e-19 85.9
MS.gene41821.t1 MTR_4g128670 43.878 98 53 2 91 186 14 111 6.52e-19 87.0
MS.gene41821.t1 MTR_5g078140 32.335 167 98 4 82 238 9 170 1.08e-18 86.3
MS.gene41821.t1 MTR_6g090405 41.346 104 59 2 91 192 14 117 3.11e-18 83.6
MS.gene41821.t1 MTR_3g065440 41.071 112 59 3 82 191 9 115 3.79e-18 84.3
MS.gene41821.t1 MTR_2g034790 38.739 111 63 2 82 191 9 115 4.64e-18 84.3
MS.gene41821.t1 MTR_1g086510 37.273 110 67 2 91 198 23 132 5.00e-18 83.2
MS.gene41821.t1 MTR_4g102380 39.806 103 59 2 91 191 14 115 7.75e-18 82.8
MS.gene41821.t1 MTR_2g033170 39.091 110 65 2 91 198 26 135 7.83e-18 84.0
MS.gene41821.t1 MTR_7g076740 36.975 119 71 3 91 206 14 131 9.31e-18 83.2
MS.gene41821.t1 MTR_4g121460 37.255 102 63 1 91 191 14 115 1.00e-17 83.6
MS.gene41821.t1 MTR_3g045430 40.777 103 58 3 91 191 15 116 1.54e-17 82.4
MS.gene41821.t1 MTR_6g006030 41.053 95 55 1 91 184 16 110 1.59e-17 80.9
MS.gene41821.t1 MTR_8g031360 41.346 104 57 3 91 191 15 117 2.07e-17 82.0
MS.gene41821.t1 MTR_5g038910 31.250 144 77 2 94 228 29 159 2.66e-17 83.2
MS.gene41821.t1 MTR_5g038910 31.250 144 77 2 94 228 29 159 3.47e-17 82.4
MS.gene41821.t1 MTR_8g468380 35.714 98 63 0 94 191 25 122 8.00e-17 81.6
MS.gene41821.t1 MTR_4g063100 48.611 72 36 1 124 195 14 84 8.44e-17 79.0
MS.gene41821.t1 MTR_4g123040 38.182 110 66 2 91 198 26 135 1.49e-16 79.7
MS.gene41821.t1 MTR_7g111290 51.613 62 30 0 124 185 6 67 3.39e-16 79.3
MS.gene41821.t1 MTR_2g096380 43.056 72 41 0 124 195 23 94 1.05e-15 75.9
MS.gene41821.t1 MTR_1g008970 47.692 65 34 0 117 181 117 181 1.57e-14 73.2
MS.gene41821.t1 MTR_7g109320 38.739 111 63 2 82 191 9 115 4.89e-14 72.8
MS.gene41821.t1 MTR_6g080360 36.957 92 57 1 93 184 481 571 5.48e-14 73.9
MS.gene41821.t1 MTR_6g080360 37.363 91 56 1 94 184 262 351 7.86e-14 73.2
MS.gene41821.t1 MTR_4g128190 41.237 97 44 4 91 186 13 97 8.48e-14 70.9
MS.gene41821.t1 MTR_5g007300 42.667 75 42 1 91 164 66 140 1.32e-12 65.1
MS.gene41821.t1 MTR_0023s0210 42.667 75 42 1 91 164 9 83 2.16e-12 62.8
MS.gene41821.t1 MTR_1g085880 39.048 105 61 3 94 196 17 120 3.13e-12 65.5
MS.gene41821.t1 MTR_1g085770 39.048 105 61 3 94 196 17 120 7.06e-12 65.9
MS.gene41821.t1 MTR_7g115550 40.000 85 50 1 92 176 8 91 8.14e-12 67.4
MS.gene41821.t1 MTR_7g115550 35.052 97 62 1 92 188 8 103 8.30e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41821.t1 AT5G17800 44.483 290 94 7 86 363 88 322 9.48e-73 229
MS.gene41821.t1 AT1G69560 46.570 277 94 9 90 364 106 330 4.92e-69 220
MS.gene41821.t1 AT1G69560 46.570 277 94 9 90 364 122 346 8.15e-69 220
MS.gene41821.t1 AT1G26780 77.586 116 26 0 88 203 95 210 2.86e-66 211
MS.gene41821.t1 AT1G26780 56.757 185 77 2 88 269 95 279 5.01e-66 213
MS.gene41821.t1 AT1G17950 75.000 108 27 0 88 195 2 109 2.93e-60 194
MS.gene41821.t1 AT3G29020 70.940 117 34 0 86 202 60 176 4.48e-60 194
MS.gene41821.t1 AT3G29020 70.940 117 34 0 86 202 62 178 1.99e-59 194
MS.gene41821.t1 AT4G33450 76.415 106 25 0 89 194 17 122 3.57e-58 189
MS.gene41821.t1 AT1G73410 42.599 277 117 8 88 362 3 239 5.85e-57 186
MS.gene41821.t1 AT1G73410 78.505 107 23 0 88 194 3 109 2.53e-56 183
MS.gene41821.t1 AT5G39700 64.423 104 37 0 92 195 57 160 4.16e-43 148
MS.gene41821.t1 AT5G67300 53.571 112 48 1 91 202 6 113 1.35e-37 137
MS.gene41821.t1 AT4G37260 41.875 160 78 3 91 248 13 159 4.83e-37 136
MS.gene41821.t1 AT3G55730 55.769 104 46 0 91 194 56 159 1.17e-36 137
MS.gene41821.t1 AT2G39880 53.913 115 51 1 84 198 45 157 2.21e-36 135
MS.gene41821.t1 AT3G50060 53.465 101 47 0 91 191 6 106 6.04e-35 130
MS.gene41821.t1 AT2G23290 53.465 101 47 0 91 191 13 113 6.63e-35 130
MS.gene41821.t1 AT3G09230 53.465 101 47 0 91 191 55 155 6.64e-34 129
MS.gene41821.t1 AT3G09370 52.475 101 48 0 91 191 135 235 9.01e-32 125
MS.gene41821.t1 AT3G09370 52.475 101 48 0 91 191 130 230 9.03e-32 125
MS.gene41821.t1 AT3G09370 52.475 101 48 0 91 191 143 243 1.38e-31 125
MS.gene41821.t1 AT5G02320 52.475 101 48 0 91 191 127 227 1.97e-31 125
MS.gene41821.t1 AT5G02320 52.475 101 48 0 91 191 127 227 1.97e-31 125
MS.gene41821.t1 AT5G02320 52.475 101 48 0 91 191 67 167 2.43e-31 124
MS.gene41821.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.12e-30 123
MS.gene41821.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.12e-30 123
MS.gene41821.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.12e-30 123
MS.gene41821.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.12e-30 123
MS.gene41821.t1 AT4G32730 41.481 135 74 2 61 191 54 187 2.31e-30 122
MS.gene41821.t1 AT5G11510 40.000 135 76 2 61 191 48 181 7.92e-30 121
MS.gene41821.t1 AT5G11510 40.000 135 76 2 61 191 48 181 7.92e-30 121
MS.gene41821.t1 AT5G11510 40.000 135 76 2 61 191 48 181 7.92e-30 121
MS.gene41821.t1 AT5G11510 39.706 136 77 2 60 191 47 181 8.60e-30 121
MS.gene41821.t1 AT5G11510 40.000 135 76 2 61 191 48 181 8.88e-30 121
MS.gene41821.t1 AT5G58850 50.000 112 56 0 80 191 94 205 1.02e-29 119
MS.gene41821.t1 AT5G11050 34.975 203 94 5 91 291 105 271 1.91e-29 118
MS.gene41821.t1 AT5G40360 40.000 150 87 2 46 192 110 259 3.44e-29 116
MS.gene41821.t1 AT3G27785 50.000 102 51 0 91 192 189 290 1.92e-27 112
MS.gene41821.t1 AT4G18770 42.857 126 72 0 91 216 217 342 4.18e-27 111
MS.gene41821.t1 AT2G25230 49.495 99 48 2 93 190 28 125 4.19e-27 107
MS.gene41821.t1 AT3G11440 42.735 117 66 1 84 199 36 152 2.18e-26 110
MS.gene41821.t1 AT3G11440 42.735 117 66 1 84 199 36 152 3.09e-26 110
MS.gene41821.t1 AT3G11440 42.735 117 66 1 84 199 36 152 3.09e-26 110
MS.gene41821.t1 AT3G11440 42.735 117 66 1 84 199 36 152 3.09e-26 110
MS.gene41821.t1 AT3G48920 42.276 123 68 2 91 210 20 142 3.58e-26 105
MS.gene41821.t1 AT2G32460 45.045 111 58 2 91 199 20 129 4.37e-25 106
MS.gene41821.t1 AT2G32460 45.045 111 58 2 91 199 8 117 4.80e-25 106
MS.gene41821.t1 AT1G79180 46.602 103 52 2 91 191 16 117 5.35e-25 103
MS.gene41821.t1 AT5G40430 36.774 155 82 3 46 190 4 152 7.99e-25 102
MS.gene41821.t1 AT5G40330 43.137 102 57 1 91 191 14 115 8.17e-25 101
MS.gene41821.t1 AT4G28110 43.478 115 59 2 83 191 1 115 8.26e-25 102
MS.gene41821.t1 AT4G25560 43.363 113 61 2 81 191 2 113 1.09e-24 102
MS.gene41821.t1 AT2G26950 43.103 116 54 3 83 193 10 118 1.34e-24 103
MS.gene41821.t1 AT4G26930 43.636 110 61 1 91 199 21 130 1.35e-24 103
MS.gene41821.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.47e-24 104
MS.gene41821.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.68e-24 105
MS.gene41821.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.68e-24 105
MS.gene41821.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.68e-24 105
MS.gene41821.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.68e-24 105
MS.gene41821.t1 AT5G14750 43.137 102 57 1 91 191 18 119 1.80e-24 99.8
MS.gene41821.t1 AT3G27920 44.118 102 56 1 91 191 16 117 2.00e-24 100
MS.gene41821.t1 AT1G63910 40.458 131 72 2 83 207 1 131 2.10e-24 103
MS.gene41821.t1 AT1G18570 45.098 102 55 1 91 191 15 116 2.46e-24 102
MS.gene41821.t1 AT3G23250 41.739 115 62 2 91 204 14 124 2.75e-24 101
MS.gene41821.t1 AT3G12720 45.631 103 53 2 91 191 24 125 2.93e-24 101
MS.gene41821.t1 AT5G56110 46.078 102 54 1 91 191 14 115 7.33e-24 100
MS.gene41821.t1 AT2G31180 44.118 102 56 1 91 191 14 115 1.99e-23 98.2
MS.gene41821.t1 AT5G10280 36.932 176 101 5 91 262 14 183 2.36e-23 99.8
MS.gene41821.t1 AT3G28470 49.474 95 47 1 91 184 14 108 2.65e-23 99.4
MS.gene41821.t1 AT1G56160 44.660 103 54 2 91 191 16 117 2.82e-23 98.6
MS.gene41821.t1 AT1G74080 40.496 121 66 2 91 210 14 129 3.50e-23 99.0
MS.gene41821.t1 AT5G61420 39.007 141 84 2 91 229 14 154 3.60e-23 99.8
MS.gene41821.t1 AT5G65230 45.631 103 53 2 91 191 14 115 3.99e-23 98.6
MS.gene41821.t1 AT4G05100 42.241 116 60 2 83 191 1 116 4.60e-23 98.6
MS.gene41821.t1 AT5G54230 43.137 102 57 1 91 191 14 115 5.48e-23 98.2
MS.gene41821.t1 AT3G13890 33.684 190 117 5 83 263 1 190 5.60e-23 99.0
MS.gene41821.t1 AT1G09540 38.462 143 84 3 85 224 8 149 7.57e-23 98.6
MS.gene41821.t1 AT2G26960 43.243 111 62 1 90 199 21 131 1.02e-22 99.0
MS.gene41821.t1 AT3G30210 34.637 179 107 4 89 262 27 200 1.08e-22 96.7
MS.gene41821.t1 AT5G60890 39.655 116 69 1 91 205 14 129 1.12e-22 97.1
MS.gene41821.t1 AT5G62470 41.584 101 59 0 91 191 14 114 1.24e-22 97.8
MS.gene41821.t1 AT3G12820 44.660 103 54 2 91 191 16 117 1.43e-22 95.5
MS.gene41821.t1 AT1G74430 37.600 125 77 1 91 214 14 138 1.56e-22 96.3
MS.gene41821.t1 AT4G00540 46.154 104 53 1 91 191 103 206 1.65e-22 98.2
MS.gene41821.t1 AT5G52600 44.118 102 56 1 91 191 14 115 1.85e-22 94.4
MS.gene41821.t1 AT1G16490 44.660 103 54 2 91 191 16 117 2.09e-22 95.9
MS.gene41821.t1 AT5G07700 37.107 159 92 3 91 242 14 171 2.69e-22 96.7
MS.gene41821.t1 AT5G07700 37.107 159 92 3 91 242 14 171 2.69e-22 96.7
MS.gene41821.t1 AT4G00540 46.154 104 53 1 91 191 101 204 3.20e-22 97.8
MS.gene41821.t1 AT4G17785 42.735 117 58 3 83 191 1 116 3.42e-22 96.7
MS.gene41821.t1 AT4G17785 42.735 117 58 3 83 191 1 116 3.50e-22 96.7
MS.gene41821.t1 AT5G52260 48.544 103 50 2 91 191 14 115 3.60e-22 95.1
MS.gene41821.t1 AT5G55020 41.818 110 63 1 91 199 28 137 3.90e-22 98.2
MS.gene41821.t1 AT3G13890 32.663 199 116 6 83 263 1 199 3.99e-22 96.7
MS.gene41821.t1 AT5G57620 44.660 103 55 2 91 191 14 116 6.65e-22 95.5
MS.gene41821.t1 AT3G47600 42.157 102 58 1 91 191 14 115 7.63e-22 95.5
MS.gene41821.t1 AT5G26660 35.570 149 89 3 91 233 14 161 8.88e-22 95.5
MS.gene41821.t1 AT4G38620 35.252 139 84 2 83 215 1 139 9.05e-22 94.4
MS.gene41821.t1 AT5G23000 44.231 104 54 2 91 191 14 116 1.25e-21 94.7
MS.gene41821.t1 AT3G02940 39.130 115 64 2 83 191 1 115 1.35e-21 94.4
MS.gene41821.t1 AT5G16770 39.130 115 64 2 83 191 1 115 1.66e-21 94.4
MS.gene41821.t1 AT5G16770 39.130 115 64 2 83 191 1 115 1.66e-21 94.4
MS.gene41821.t1 AT4G01680 39.091 110 66 1 85 193 8 117 1.66e-21 92.4
MS.gene41821.t1 AT1G35515 36.522 115 67 2 83 191 1 115 1.67e-21 92.0
MS.gene41821.t1 AT3G53200 42.056 107 59 2 91 195 11 116 1.80e-21 92.4
MS.gene41821.t1 AT5G07690 39.516 124 69 2 91 213 14 132 1.86e-21 94.4
MS.gene41821.t1 AT1G22640 39.655 116 62 3 83 191 1 115 2.02e-21 92.8
MS.gene41821.t1 AT3G02940 39.130 115 64 2 83 191 1 115 2.09e-21 94.0
MS.gene41821.t1 AT3G02940 39.130 115 64 2 83 191 1 115 2.09e-21 94.0
MS.gene41821.t1 AT5G16770 39.130 115 64 2 83 191 1 115 2.33e-21 94.0
MS.gene41821.t1 AT5G16770 39.130 115 64 2 83 191 1 115 2.33e-21 94.0
MS.gene41821.t1 AT4G21440 43.137 102 57 1 91 191 14 115 2.34e-21 94.4
MS.gene41821.t1 AT1G57560 35.227 176 103 5 85 253 8 179 2.42e-21 92.8
MS.gene41821.t1 AT1G06180 41.880 117 60 4 82 195 9 120 2.60e-21 92.0
MS.gene41821.t1 AT1G79180 37.037 135 51 2 91 191 16 150 3.01e-21 93.6
MS.gene41821.t1 AT1G34670 40.000 115 63 2 83 191 1 115 3.18e-21 94.0
MS.gene41821.t1 AT5G62470 41.176 102 59 1 91 191 14 115 3.76e-21 93.6
MS.gene41821.t1 AT4G01680 39.091 110 66 1 85 193 8 117 3.99e-21 93.2
MS.gene41821.t1 AT5G35550 40.777 103 60 1 90 191 15 117 4.10e-21 92.0
MS.gene41821.t1 AT3G49690 44.660 103 55 2 91 191 14 116 4.68e-21 92.8
MS.gene41821.t1 AT5G15310 37.415 147 83 3 83 223 1 144 5.89e-21 92.8
MS.gene41821.t1 AT1G66370 37.963 108 66 1 91 197 10 117 6.46e-21 90.9
MS.gene41821.t1 AT5G15310 37.415 147 83 3 83 223 1 144 8.04e-21 92.0
MS.gene41821.t1 AT5G12870 37.391 115 71 1 78 191 7 121 1.00e-20 91.3
MS.gene41821.t1 AT3G01140 39.130 115 64 2 83 191 1 115 1.12e-20 92.4
MS.gene41821.t1 AT4G09460 31.609 174 103 3 83 240 1 174 1.28e-20 90.1
MS.gene41821.t1 AT3G46130 41.121 107 60 2 91 195 11 116 1.31e-20 90.5
MS.gene41821.t1 AT5G59780 40.187 107 61 2 91 195 10 115 1.43e-20 89.7
MS.gene41821.t1 AT1G57560 35.172 145 89 3 85 227 8 149 1.44e-20 91.3
MS.gene41821.t1 AT3G01140 41.176 102 59 1 91 191 57 158 1.76e-20 92.0
MS.gene41821.t1 AT5G14340 40.000 105 60 2 91 193 26 129 1.76e-20 90.5
MS.gene41821.t1 AT5G15310 39.130 115 64 2 83 191 1 115 2.01e-20 89.7
MS.gene41821.t1 AT5G65790 34.752 141 86 3 91 225 14 154 2.06e-20 92.0
MS.gene41821.t1 AT5G14750 48.529 68 35 0 124 191 18 85 2.14e-20 87.8
MS.gene41821.t1 AT1G18710 40.196 102 60 1 91 191 14 115 2.26e-20 90.1
MS.gene41821.t1 AT3G60460 45.714 105 55 2 91 193 13 117 2.35e-20 90.5
MS.gene41821.t1 AT2G47190 40.000 110 64 2 91 198 22 131 3.78e-20 89.4
MS.gene41821.t1 AT3G08500 42.157 102 58 1 91 191 32 133 4.10e-20 90.5
MS.gene41821.t1 AT1G25340 38.462 104 60 1 91 194 20 119 6.03e-20 89.0
MS.gene41821.t1 AT4G01680 37.705 122 63 2 85 193 8 129 6.39e-20 90.1
MS.gene41821.t1 AT1G66380 37.600 125 77 1 84 207 3 127 7.30e-20 85.1
MS.gene41821.t1 AT1G25340 38.095 105 64 1 91 194 20 124 8.10e-20 89.0
MS.gene41821.t1 AT1G25340 38.462 104 60 1 91 194 20 119 8.11e-20 89.4
MS.gene41821.t1 AT3G28910 40.196 102 60 1 91 191 14 115 9.30e-20 89.4
MS.gene41821.t1 AT2G16720 37.069 116 65 3 83 191 1 115 1.06e-19 88.2
MS.gene41821.t1 AT3G61250 37.594 133 76 3 82 212 9 136 1.12e-19 88.6
MS.gene41821.t1 AT4G34990 37.391 115 66 2 83 191 1 115 1.23e-19 88.2
MS.gene41821.t1 AT1G66230 33.939 165 100 5 82 242 9 168 1.29e-19 88.2
MS.gene41821.t1 AT5G16600 37.594 133 76 3 82 212 9 136 1.33e-19 89.0
MS.gene41821.t1 AT1G56650 32.317 164 103 3 84 246 3 159 1.36e-19 87.4
MS.gene41821.t1 AT1G68320 39.048 105 63 1 91 194 21 125 1.79e-19 87.8
MS.gene41821.t1 AT3G13540 34.146 123 80 1 91 212 25 147 2.04e-19 87.0
MS.gene41821.t1 AT5G49620 36.232 138 82 3 63 198 4 137 3.32e-19 87.4
MS.gene41821.t1 AT1G74650 38.235 102 62 1 91 191 14 115 3.40e-19 87.8
MS.gene41821.t1 AT2G36890 43.269 104 55 3 91 191 14 116 3.75e-19 87.0
MS.gene41821.t1 AT2G36890 43.269 104 55 3 91 191 55 157 4.02e-19 87.8
MS.gene41821.t1 AT2G02820 33.884 121 80 0 94 214 33 153 4.46e-19 88.6
MS.gene41821.t1 AT2G02820 33.884 121 80 0 94 214 33 153 5.28e-19 87.4
MS.gene41821.t1 AT2G02820 33.884 121 80 0 94 214 33 153 5.64e-19 88.6
MS.gene41821.t1 AT1G08810 40.196 102 60 1 91 191 14 115 7.90e-19 85.9
MS.gene41821.t1 AT3G12820 51.471 68 33 0 124 191 2 69 8.31e-19 84.0
MS.gene41821.t1 AT4G13480 40.187 107 61 2 87 191 4 109 8.51e-19 85.5
MS.gene41821.t1 AT3G24310 41.748 103 57 2 91 191 20 121 9.30e-19 85.5
MS.gene41821.t1 AT3G53200 48.611 72 37 0 124 195 12 83 1.38e-18 83.6
MS.gene41821.t1 AT1G48000 43.158 95 53 1 91 184 34 128 1.61e-18 84.3
MS.gene41821.t1 AT4G12350 38.679 106 62 2 88 191 11 115 2.40e-18 84.7
MS.gene41821.t1 AT5G35550 46.154 78 40 1 116 191 43 120 2.50e-18 84.0
MS.gene41821.t1 AT5G40350 41.053 95 55 1 91 184 19 113 2.83e-18 82.8
MS.gene41821.t1 AT3G27810 41.053 95 55 1 91 184 22 116 5.04e-18 82.4
MS.gene41821.t1 AT4G37780 38.835 103 61 2 91 191 14 116 8.46e-18 83.6
MS.gene41821.t1 AT4G22680 40.777 103 58 2 91 191 14 115 8.67e-18 82.8
MS.gene41821.t1 AT3G01530 40.196 102 58 2 91 190 27 127 9.01e-18 81.3
MS.gene41821.t1 AT1G14350 34.951 103 67 0 94 196 28 130 1.23e-17 84.3
MS.gene41821.t1 AT1G14350 34.951 103 67 0 94 196 28 130 1.23e-17 84.3
MS.gene41821.t1 AT2G47460 35.556 135 77 3 91 224 14 139 1.28e-17 83.6
MS.gene41821.t1 AT5G26660 36.842 114 68 1 124 233 17 130 1.65e-17 82.8
MS.gene41821.t1 AT3G06490 39.091 110 65 2 91 198 21 130 1.77e-17 82.8
MS.gene41821.t1 AT5G49330 37.864 103 61 2 91 191 14 115 3.86e-17 82.0
MS.gene41821.t1 AT5G59780 45.833 72 39 0 124 195 23 94 4.00e-17 79.7
MS.gene41821.t1 AT2G37630 33.571 140 83 2 91 220 4 143 4.72e-17 82.0
MS.gene41821.t1 AT3G46130 43.210 81 44 1 117 195 4 84 5.67e-17 79.7
MS.gene41821.t1 AT1G66390 40.000 110 65 1 84 192 3 112 7.24e-17 79.7
MS.gene41821.t1 AT3G46130 45.833 72 39 0 124 195 23 94 7.98e-17 79.3
MS.gene41821.t1 AT3G62610 35.043 117 71 2 76 191 3 115 1.62e-16 80.1
MS.gene41821.t1 AT3G18100 38.298 94 58 0 91 184 546 639 2.58e-16 80.9
MS.gene41821.t1 AT3G18100 38.298 94 58 0 91 184 498 591 2.81e-16 80.9
MS.gene41821.t1 AT3G18100 38.298 94 58 0 91 184 385 478 3.85e-16 80.5
MS.gene41821.t1 AT3G18100 38.298 94 58 0 91 184 333 426 4.40e-16 80.1
MS.gene41821.t1 AT5G49620 32.895 152 82 4 63 198 4 151 7.81e-16 77.8
MS.gene41821.t1 AT5G40350 47.541 61 32 0 124 184 8 68 1.34e-15 74.3
MS.gene41821.t1 AT3G27810 47.541 61 32 0 124 184 7 67 2.61e-15 73.6
MS.gene41821.t1 AT5G62320 38.182 110 58 3 91 191 15 123 2.63e-15 75.1
MS.gene41821.t1 AT1G66380 45.570 79 43 0 124 202 11 89 3.62e-15 71.2
MS.gene41821.t1 AT3G47600 45.588 68 37 0 124 191 42 109 8.08e-15 75.1
MS.gene41821.t1 AT1G71030 41.538 65 38 0 127 191 5 69 1.26e-13 68.9
MS.gene41821.t1 AT1G71030 41.538 65 38 0 127 191 19 83 1.53e-13 69.3
MS.gene41821.t1 AT5G14750 41.379 58 34 0 134 191 1 58 6.00e-13 66.2
MS.gene41821.t1 AT5G14750 41.379 58 34 0 134 191 1 58 6.00e-13 66.2
MS.gene41821.t1 AT3G23250 40.845 71 38 1 134 204 1 67 1.40e-12 67.0
MS.gene41821.t1 AT1G22640 43.103 58 33 0 134 191 1 58 8.87e-12 64.3
MS.gene41821.t1 AT1G09770 40.000 85 50 1 92 176 8 91 1.32e-11 66.6

Find 64 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATATGGTCCTCAAAAT+TGG 0.247103 7.3:+21877318 MS.gene41821:CDS
AGGTCCAATATCTCAATTTC+TGG 0.252170 7.3:+21878604 MS.gene41821:CDS
TTCACCAGAAATTGAGATAT+TGG 0.257304 7.3:-21878608 None:intergenic
CCACCACATCTATTAGCTTT+AGG 0.258873 7.3:-21878516 None:intergenic
AAGGAGCTTGTTGCTGAATA+TGG 0.317262 7.3:+21877305 MS.gene41821:CDS
TCAAGGCTATGGATCACTAA+TGG 0.326250 7.3:+21878101 MS.gene41821:CDS
TTAAGTTTAGCATCTTCTAT+TGG 0.361231 7.3:-21877284 None:intergenic
GAAAGACTTTCAACAACAAC+AGG 0.361584 7.3:-21877913 None:intergenic
CTCTTCTTCCTCCTCAGAAA+AGG 0.362113 7.3:-21877737 None:intergenic
ACTATCTCAAGCACCATTGA+TGG 0.370339 7.3:+21877982 MS.gene41821:CDS
AAAGCACCCATCTTCTACTT+TGG 0.377594 7.3:-21877150 None:intergenic
AATTGAGATATTGGACCTAT+TGG 0.389765 7.3:-21878599 None:intergenic
ATAAAATGTATGGTAACAAA+TGG 0.396082 7.3:+21877776 MS.gene41821:CDS
TTATCTGCTCATAAAATGTA+TGG 0.400874 7.3:+21877766 MS.gene41821:CDS
TCCTTTGACAAACCCTGAAA+AGG 0.411626 7.3:+21877094 MS.gene41821:CDS
AGCTTTGTTCTAGAGGTCAT+TGG 0.416349 7.3:+21877258 MS.gene41821:CDS
GTTTGTCAAAGGAAGAGCTT+TGG 0.416396 7.3:-21877084 None:intergenic
AATAGAAGATGCTAAACTTA+AGG 0.419512 7.3:+21877286 MS.gene41821:CDS
AGCTCTGTTTCTGTGAAAGT+TGG 0.422370 7.3:+21877227 MS.gene41821:CDS
AACAGTGTACTGTGTATAGA+AGG 0.441649 7.3:+21877884 MS.gene41821:CDS
AGTTGAGACATTTCCATCAA+TGG 0.441701 7.3:-21877995 None:intergenic
TATTCCTTCAACTCATCTTG+TGG 0.441836 7.3:+21877058 MS.gene41821:CDS
CAAGGCTATGGATCACTAAT+GGG 0.446395 7.3:+21878102 MS.gene41821:CDS
ACAAGATGAGTTGAAGGAAT+AGG 0.447818 7.3:-21877056 None:intergenic
TTGATTGCAGAACATCTTGA+AGG 0.454431 7.3:+21877344 MS.gene41821:CDS
GGACTTAGTTTAGCTGAAGA+AGG 0.460680 7.3:-21878039 None:intergenic
TAGCCTTGATGATTCTCAAC+AGG 0.466731 7.3:-21878087 None:intergenic
ATAATGCAGTGAAGAATCAT+TGG 0.470220 7.3:+21877833 MS.gene41821:CDS
GAGAAAGTGTGGTGGCAACT+AGG 0.473551 7.3:+21878437 MS.gene41821:CDS
AGAAAGTGTGGTGGCAACTA+GGG 0.475189 7.3:+21878438 MS.gene41821:CDS
GAACATCTTGAAGGAAGATC+AGG 0.475989 7.3:+21877353 MS.gene41821:CDS
GATGGGTGCTTTGAGGTTCA+AGG 0.478786 7.3:+21877161 MS.gene41821:CDS
TTTAGGTCCAAAGTAGAAGA+TGG 0.479793 7.3:+21877143 MS.gene41821:CDS
GAATCCACAAGATGAGTTGA+AGG 0.483859 7.3:-21877062 None:intergenic
GTTGAAGGAATAGGAGCTAA+AGG 0.488826 7.3:-21877047 None:intergenic
CATTACCAAGTTTCAAAGAC+AGG 0.490809 7.3:-21877190 None:intergenic
CCTTTGACAAACCCTGAAAA+GGG 0.491757 7.3:+21877095 MS.gene41821:CDS
CTGAGTCAGTTACCACCAAT+AGG 0.493276 7.3:+21878584 MS.gene41821:CDS
ACTTTGGACCTAAACATTGA+GGG 0.493361 7.3:-21877134 None:intergenic
GTTGAGAATCATCAAGGCTA+TGG 0.501256 7.3:+21878090 MS.gene41821:CDS
TACTCCAAGCTTTGTTCTAG+AGG 0.507196 7.3:+21877251 MS.gene41821:CDS
TAAAATGTATGGTAACAAAT+GGG 0.508678 7.3:+21877777 MS.gene41821:CDS
TACTTTGGACCTAAACATTG+AGG 0.508715 7.3:-21877135 None:intergenic
ACTCCAAGAAAATCAATGAA+TGG 0.522689 7.3:-21878667 None:intergenic
TGAGATATTGGACCTATTGG+TGG 0.526375 7.3:-21878596 None:intergenic
AGTAGAAGATGGGTGCTTTG+AGG 0.530721 7.3:+21877154 MS.gene41821:CDS
GAATCATTGGCATGTGATCA+TGG 0.539113 7.3:+21877846 MS.gene41821:CDS
TGTTGTTGAAAGTCTTTCAA+AGG 0.540837 7.3:+21877918 MS.gene41821:CDS
GTTCCTGTTGAGAATCATCA+AGG 0.545521 7.3:+21878084 MS.gene41821:CDS
TGATCATGGCTAGAAGACAT+AGG 0.551949 7.3:+21877860 MS.gene41821:CDS
ATGACCTCTAGAACAAAGCT+TGG 0.553743 7.3:-21877255 None:intergenic
ACTGCATTATCTGTCCTCCC+TGG 0.564600 7.3:-21877820 None:intergenic
CCTAAAGCTAATAGATGTGG+TGG 0.574295 7.3:+21878516 MS.gene41821:CDS
GATCATGGCTAGAAGACATA+GGG 0.580957 7.3:+21877861 MS.gene41821:CDS
TCTGGTGAAAGTGAAAATGT+TGG 0.594833 7.3:+21878622 MS.gene41821:CDS
AAAGCTAATAGATGTGGTGG+TGG 0.600371 7.3:+21878519 MS.gene41821:CDS
GTTGAACTTCTGTGAAGTCA+TGG 0.600796 7.3:-21876997 None:intergenic
ACTAGTTTATCAAACAGTTG+AGG 0.605771 7.3:-21878060 None:intergenic
AAACCTAAAGCTAATAGATG+TGG 0.605878 7.3:+21878513 MS.gene41821:CDS
TTAGGTCCAAAGTAGAAGAT+GGG 0.619017 7.3:+21877144 MS.gene41821:CDS
TAGTAAGAAGAATGAACAAG+TGG 0.631441 7.3:+21878489 MS.gene41821:CDS
AGACAAATCTAGAGAAAGTG+TGG 0.652450 7.3:+21878426 MS.gene41821:intron
ACTTCACAGAAGTTCAACAA+TGG 0.689923 7.3:+21877002 MS.gene41821:CDS
CAAATCTAGAGAAAGTGTGG+TGG 0.706572 7.3:+21878429 MS.gene41821:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAATATTTATAAATT+GGG + chr7.3:21877595-21877614 MS.gene41821:intron 0.0%
!! AAAATTAATAACTAATTTCA+TGG - chr7.3:21878348-21878367 None:intergenic 10.0%
!!! CTTTAATATTTTCTTAAAAA+TGG - chr7.3:21877394-21877413 None:intergenic 10.0%
!!! TTAATATTTTCTTAAAAATG+GGG - chr7.3:21877392-21877411 None:intergenic 10.0%
!! AATATATTAAAATACATGCA+AGG - chr7.3:21877637-21877656 None:intergenic 15.0%
!! ATATTTAATAATCTCTCATT+AGG + chr7.3:21878131-21878150 MS.gene41821:intron 15.0%
!! CAATACAAATATTTATATTG+CGG + chr7.3:21878198-21878217 MS.gene41821:intron 15.0%
!! ATAAAATGTATGGTAACAAA+TGG + chr7.3:21877776-21877795 MS.gene41821:CDS 20.0%
!! CGCAATATAAATATTTGTAT+TGG - chr7.3:21878200-21878219 None:intergenic 20.0%
!! TAAAATGTATGGTAACAAAT+GGG + chr7.3:21877777-21877796 MS.gene41821:CDS 20.0%
!! TGTTATGTAACAATTAAGTT+TGG - chr7.3:21878378-21878397 None:intergenic 20.0%
!!! AATTTCATGGTTTTAAATTG+CGG - chr7.3:21878335-21878354 None:intergenic 20.0%
!!! ACCATGTTTTATACTATTAT+AGG - chr7.3:21878157-21878176 None:intergenic 20.0%
!!! TTGTTTTCAATTTTAATTGC+AGG + chr7.3:21877658-21877677 MS.gene41821:intron 20.0%
! AATAGAAGATGCTAAACTTA+AGG + chr7.3:21877286-21877305 MS.gene41821:CDS 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG - chr7.3:21878551-21878570 None:intergenic 25.0%
! GCCTATAATAGTATAAAACA+TGG + chr7.3:21878153-21878172 MS.gene41821:intron 25.0%
! TTAAGTTTAGCATCTTCTAT+TGG - chr7.3:21877287-21877306 None:intergenic 25.0%
! TTATCTGCTCATAAAATGTA+TGG + chr7.3:21877766-21877785 MS.gene41821:CDS 25.0%
! TTTATATTGCGGTAAAATGT+AGG + chr7.3:21878209-21878228 MS.gene41821:intron 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG - chr7.3:21877721-21877740 None:intergenic 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG - chr7.3:21877720-21877739 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG + chr7.3:21878463-21878482 MS.gene41821:CDS 25.0%
!!! TAAAACATGGTTTTAAGTTG+CGG + chr7.3:21878166-21878185 MS.gene41821:intron 25.0%
AAACCTAAAGCTAATAGATG+TGG + chr7.3:21878513-21878532 MS.gene41821:CDS 30.0%
AATTGAGATATTGGACCTAT+TGG - chr7.3:21878602-21878621 None:intergenic 30.0%
AATTGTAAATGCGACGTAAT+CGG - chr7.3:21878243-21878262 None:intergenic 30.0%
ACTCCAAGAAAATCAATGAA+TGG - chr7.3:21878670-21878689 None:intergenic 30.0%
ATAATGCAGTGAAGAATCAT+TGG + chr7.3:21877833-21877852 MS.gene41821:CDS 30.0%
TAGTAAGAAGAATGAACAAG+TGG + chr7.3:21878489-21878508 MS.gene41821:CDS 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG + chr7.3:21877918-21877937 MS.gene41821:CDS 30.0%
TTCACCAGAAATTGAGATAT+TGG - chr7.3:21878611-21878630 None:intergenic 30.0%
TTGAATCTGAAAAATTGGAC+TGG - chr7.3:21878546-21878565 None:intergenic 30.0%
! ACTAGTTTATCAAACAGTTG+AGG - chr7.3:21878063-21878082 None:intergenic 30.0%
! ATTTTCTTAAAAATGGGGTG+AGG - chr7.3:21877387-21877406 None:intergenic 30.0%
! CAACAAAAAAACCTTTTCTG+AGG + chr7.3:21877726-21877745 MS.gene41821:CDS 30.0%
!! AAAAACCTGTCTTTGAAACT+TGG + chr7.3:21877185-21877204 MS.gene41821:CDS 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG + chr7.3:21877802-21877821 MS.gene41821:CDS 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG + chr7.3:21877803-21877822 MS.gene41821:CDS 30.0%
!!! CTACCATTCATTGATTTTCT+TGG + chr7.3:21878664-21878683 MS.gene41821:CDS 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG + chr7.3:21878670-21878689 MS.gene41821:CDS 30.0%
AACAGTGTACTGTGTATAGA+AGG + chr7.3:21877884-21877903 MS.gene41821:CDS 35.0%
ACTTCACAGAAGTTCAACAA+TGG + chr7.3:21877002-21877021 MS.gene41821:CDS 35.0%
ACTTTGGACCTAAACATTGA+GGG - chr7.3:21877137-21877156 None:intergenic 35.0%
AGACAAATCTAGAGAAAGTG+TGG + chr7.3:21878426-21878445 MS.gene41821:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG + chr7.3:21878604-21878623 MS.gene41821:CDS 35.0%
AGTTGAGACATTTCCATCAA+TGG - chr7.3:21877998-21878017 None:intergenic 35.0%
CAGGAAAAAGTTGTAGATTG+AGG + chr7.3:21877677-21877696 MS.gene41821:intron 35.0%
CATTACCAAGTTTCAAAGAC+AGG - chr7.3:21877193-21877212 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG + chr7.3:21877318-21877337 MS.gene41821:CDS 35.0%
GAAAAAGTTGTAGATTGAGG+TGG + chr7.3:21877680-21877699 MS.gene41821:CDS 35.0%
GAAAGACTTTCAACAACAAC+AGG - chr7.3:21877916-21877935 None:intergenic 35.0%
GTAAGTGCATGTTTGGATTT+AGG + chr7.3:21877437-21877456 MS.gene41821:intron 35.0%
TACTTTGGACCTAAACATTG+AGG - chr7.3:21877138-21877157 None:intergenic 35.0%
TATTCCTTCAACTCATCTTG+TGG + chr7.3:21877058-21877077 MS.gene41821:CDS 35.0%
TCTGGTGAAAGTGAAAATGT+TGG + chr7.3:21878622-21878641 MS.gene41821:CDS 35.0%
TGACGAGGTTTGCAAAATTA+CGG + chr7.3:21878303-21878322 MS.gene41821:intron 35.0%
TTAGGTCCAAAGTAGAAGAT+GGG + chr7.3:21877144-21877163 MS.gene41821:CDS 35.0%
TTGATTGCAGAACATCTTGA+AGG + chr7.3:21877344-21877363 MS.gene41821:CDS 35.0%
TTTAGGTCCAAAGTAGAAGA+TGG + chr7.3:21877143-21877162 MS.gene41821:CDS 35.0%
! AAAATCTGAAGACCCTTTTC+AGG - chr7.3:21877110-21877129 None:intergenic 35.0%
! AAATCTGAAGACCCTTTTCA+GGG - chr7.3:21877109-21877128 None:intergenic 35.0%
! ACAAGATGAGTTGAAGGAAT+AGG - chr7.3:21877059-21877078 None:intergenic 35.0%
! GCAATCAAGTTCCAATTTTG+AGG - chr7.3:21877332-21877351 None:intergenic 35.0%
!! CAAAAAAACCTTTTCTGAGG+AGG + chr7.3:21877729-21877748 MS.gene41821:CDS 35.0%
!! TTCTAGAGTAAGTGCATGTT+TGG + chr7.3:21877430-21877449 MS.gene41821:intron 35.0%
!!! TTTTGAGACCCTCAATGTTT+AGG + chr7.3:21877126-21877145 MS.gene41821:CDS 35.0%
AAAGCTAATAGATGTGGTGG+TGG + chr7.3:21878519-21878538 MS.gene41821:CDS 40.0%
ACTATCTCAAGCACCATTGA+TGG + chr7.3:21877982-21878001 MS.gene41821:CDS 40.0%
CAAGGCTATGGATCACTAAT+GGG + chr7.3:21878102-21878121 MS.gene41821:CDS 40.0%
CCTAAAGCTAATAGATGTGG+TGG + chr7.3:21878516-21878535 MS.gene41821:CDS 40.0%
CCTTTGACAAACCCTGAAAA+GGG + chr7.3:21877095-21877114 MS.gene41821:CDS 40.0%
GAACATCTTGAAGGAAGATC+AGG + chr7.3:21877353-21877372 MS.gene41821:CDS 40.0%
GAATCATTGGCATGTGATCA+TGG + chr7.3:21877846-21877865 MS.gene41821:CDS 40.0%
GATCATGGCTAGAAGACATA+GGG + chr7.3:21877861-21877880 MS.gene41821:CDS 40.0%
GCGGTAAAATGTAGGCAAAT+GGG + chr7.3:21878217-21878236 MS.gene41821:intron 40.0%
GGACTTAGTTTAGCTGAAGA+AGG - chr7.3:21878042-21878061 None:intergenic 40.0%
GTTCCTGTTGAGAATCATCA+AGG + chr7.3:21878084-21878103 MS.gene41821:CDS 40.0%
GTTGAAGGAATAGGAGCTAA+AGG - chr7.3:21877050-21877069 None:intergenic 40.0%
GTTGAGAATCATCAAGGCTA+TGG + chr7.3:21878090-21878109 MS.gene41821:CDS 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG - chr7.3:21877087-21877106 None:intergenic 40.0%
TCAAGGCTATGGATCACTAA+TGG + chr7.3:21878101-21878120 MS.gene41821:CDS 40.0%
TCATCACTTTGTGACACAAC+AGG - chr7.3:21877479-21877498 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG + chr7.3:21877094-21877113 MS.gene41821:CDS 40.0%
TGAGATATTGGACCTATTGG+TGG - chr7.3:21878599-21878618 None:intergenic 40.0%
TGATCATGGCTAGAAGACAT+AGG + chr7.3:21877860-21877879 MS.gene41821:CDS 40.0%
TGCGGTAAAATGTAGGCAAA+TGG + chr7.3:21878216-21878235 MS.gene41821:intron 40.0%
! AAAGCACCCATCTTCTACTT+TGG - chr7.3:21877153-21877172 None:intergenic 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG + chr7.3:21878429-21878448 MS.gene41821:CDS 40.0%
! GAATCCACAAGATGAGTTGA+AGG - chr7.3:21877065-21877084 None:intergenic 40.0%
! GCATGTTTAGAATCATGACG+AGG + chr7.3:21878288-21878307 MS.gene41821:intron 40.0%
! TAGCCTTGATGATTCTCAAC+AGG - chr7.3:21878090-21878109 None:intergenic 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG + chr7.3:21877305-21877324 MS.gene41821:CDS 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG + chr7.3:21877227-21877246 MS.gene41821:CDS 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG + chr7.3:21877258-21877277 MS.gene41821:CDS 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG - chr7.3:21877258-21877277 None:intergenic 40.0%
!! CCACCACATCTATTAGCTTT+AGG - chr7.3:21878519-21878538 None:intergenic 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG + chr7.3:21877251-21877270 MS.gene41821:CDS 40.0%
AGTAGAAGATGGGTGCTTTG+AGG + chr7.3:21877154-21877173 MS.gene41821:CDS 45.0%
CTCTTCTTCCTCCTCAGAAA+AGG - chr7.3:21877740-21877759 None:intergenic 45.0%
CTGAGTCAGTTACCACCAAT+AGG + chr7.3:21878584-21878603 MS.gene41821:CDS 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG + chr7.3:21878438-21878457 MS.gene41821:CDS 45.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG - chr7.3:21877098-21877117 None:intergenic 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG + chr7.3:21877806-21877825 MS.gene41821:CDS 45.0%
!!! CTTTTTTAATATTTATAAAT+TGG + chr7.3:21877594-21877613 MS.gene41821:intron 5.0%
!!! TTTAATATTTTCTTAAAAAT+GGG - chr7.3:21877393-21877412 None:intergenic 5.0%
!!! TTTTTAATATTTATAAATTG+GGG + chr7.3:21877596-21877615 MS.gene41821:intron 5.0%
ACTGCATTATCTGTCCTCCC+TGG - chr7.3:21877823-21877842 None:intergenic 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG + chr7.3:21878437-21878456 MS.gene41821:CDS 50.0%
!! GATGGGTGCTTTGAGGTTCA+AGG + chr7.3:21877161-21877180 MS.gene41821:CDS 50.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 21876999 21878708 21876999 ID=MS.gene41821
chr7.3 mRNA 21876999 21878708 21876999 ID=MS.gene41821.t1;Parent=MS.gene41821
chr7.3 exon 21876999 21877374 21876999 ID=MS.gene41821.t1.exon1;Parent=MS.gene41821.t1
chr7.3 CDS 21876999 21877374 21876999 ID=cds.MS.gene41821.t1;Parent=MS.gene41821.t1
chr7.3 exon 21877680 21878123 21877680 ID=MS.gene41821.t1.exon2;Parent=MS.gene41821.t1
chr7.3 CDS 21877680 21878123 21877680 ID=cds.MS.gene41821.t1;Parent=MS.gene41821.t1
chr7.3 exon 21878428 21878708 21878428 ID=MS.gene41821.t1.exon3;Parent=MS.gene41821.t1
chr7.3 CDS 21878428 21878708 21878428 ID=cds.MS.gene41821.t1;Parent=MS.gene41821.t1
Gene Sequence

>MS.gene41821

ATGACTTCACAGAAGTTCAACAATGGTGATATCAATATGAGTCTTTTTCCTTTAGCTCCTATTCCTTCAACTCATCTTGTGGATTCCAAAGCTCTTCCTTTGACAAACCCTGAAAAGGGTCTTCAGATTTTGAGACCCTCAATGTTTAGGTCCAAAGTAGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACCTGTCTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCTCTGTTTCTGTGAAAGTTGGATACTCCAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCTAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGAAGGAAGATCAGGTAATTCATCCTCACCCCATTTTTAAGAAAATATTAAAGTTTATGTTTAGATGAATTCTAGAGTAAGTGCATGTTTGGATTTAGGAAGAGCTTAGCATAATCCTGTTGTGTCACAAAGTGATGATATTAACTGAAGTTGCATTTTTTAACTTCAACAAAATCAACATATCAATGTGATTTTAAAGTATTTTTTTGAAGTATTGTTTCTAAAGTTCAATACTTTTTTAATATTTATAAATTGGGGTGTGAAAAAATCAAACCTTGCATGTATTTTAATATATTTTTGTTTTCAATTTTAATTGCAGGAAAAAGTTGTAGATTGAGGTGGTTCAATCAGTTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAGGAAGAAGAGAGACTTTTATCTGCTCATAAAATGTATGGTAACAAATGGGCTATAATTGCTAGACTTTTTCCAGGGAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGCCTGTTGTTGTTGAAAGTCTTTCAAAGGATTTAAAATTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGCACCATTGATGGAAATGTCTCAACTTGCACTAATCTCTCACTCACTCCTTCTTCAGCTAAACTAAGTCCTCAACTGTTTGATAAACTAGTTGTTCCTGTTGAGAATCATCAAGGCTATGGATCACTAATGGGTATGCAATATTTAATAATCTCTCATTAGGCCTATAATAGTATAAAACATGGTTTTAAGTTGCGGTTACGATTCCAATACAAATATTTATATTGCGGTAAAATGTAGGCAAATGGGCCGATTACGTCGCATTTACAATTGTGATGTTTTTTATATACTATAAGTGCATGTTTAGAATCATGACGAGGTTTGCAAAATTACGGTGTGATCCGCAATTTAAAACCATGAAATTAGTTATTAATTTTTTCATGTCCAAACTTAATTGTTACATAACATATGTTACATTATGTGATGTGTAATTGCAGACAAATCTAGAGAAAGTGTGGTGGCAACTAGGGATGTGAATTTTGACAAGTATTTTGGAGCTAGTAAGAAGAATGAACAAGTGGAAAACCTAAAGCTAATAGATGTGGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTGTTAAGATTAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA
Protein sequence

>MS.gene41821.t1

MTSQKFNNGDINMSLFPLAPIPSTHLVDSKALPLTNPEKGLQILRPSMFRSKVEDGCFEVQGKNLSLKLGNEVEDKSSVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLSAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKPVVVESLSKDLKLSLSNNAASDSTISSTIDGNVSTCTNLSLTPSSAKLSPQLFDKLVVPVENHQGYGSLMDKSRESVVATRDVNFDKYFGASKKNEQVENLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGESENVGVKINMLLPFIDFLGVGAIQS