Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41846.t1 | XP_024626277.1 | 98.7 | 700 | 9 | 0 | 6 | 705 | 11 | 710 | 0.00E+00 | 1428.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41846.t1 | G7L2Q2 | 99.1 | 697 | 6 | 0 | 9 | 705 | 3 | 699 | 0.0e+00 | 1427.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051631 | MS.gene41846 | -0.807811 | 4.21E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41846.t1 | MTR_7g087510 | 99.139 | 697 | 6 | 0 | 9 | 705 | 3 | 699 | 0.0 | 1440 |
| MS.gene41846.t1 | MTR_7g087510 | 99.343 | 609 | 4 | 0 | 97 | 705 | 1 | 609 | 0.0 | 1263 |
| MS.gene41846.t1 | MTR_3g097460 | 45.760 | 684 | 346 | 12 | 33 | 702 | 27 | 699 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41846.t1 | AT2G40980 | 74.847 | 489 | 120 | 3 | 216 | 704 | 131 | 616 | 0.0 | 777 |
| MS.gene41846.t1 | AT2G40980 | 68.992 | 129 | 38 | 1 | 9 | 135 | 3 | 131 | 5.24e-38 | 150 |
Find 189 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCATATGTCATAGTTTA+TGG | 0.113224 | 7.3:-21542581 | None:intergenic |
| CAGCCTTCTTTACCAGTTCT+AGG | 0.227719 | 7.3:+21541170 | MS.gene41846:CDS |
| GAGTAGACTGAGTTTCTTTC+CGG | 0.235522 | 7.3:+21541238 | MS.gene41846:CDS |
| CTTGGGAAGATATGAATTTA+TGG | 0.240828 | 7.3:+21541888 | MS.gene41846:CDS |
| AGGGCTTGTGGGAGGCATTT+TGG | 0.243026 | 7.3:+21540925 | MS.gene41846:CDS |
| AATGCAAACTGGGGAGATAT+TGG | 0.248944 | 7.3:+21541443 | MS.gene41846:CDS |
| TTTCTCCAATTTATAGAATC+TGG | 0.256024 | 7.3:+21541408 | MS.gene41846:CDS |
| TTGTTCCAGATTCTATAAAT+TGG | 0.266022 | 7.3:-21541413 | None:intergenic |
| CCCCGAGATTGTCGAAGTTC+AGG | 0.286254 | 7.3:+21541655 | MS.gene41846:CDS |
| TACAAACAAGCCGCAGAAAA+AGG | 0.289452 | 7.3:-21540966 | None:intergenic |
| ATGTCATAGTTTATGGGATA+TGG | 0.306516 | 7.3:-21542574 | None:intergenic |
| ACAAACTTGGGAATGCAAAC+TGG | 0.315758 | 7.3:+21541432 | MS.gene41846:CDS |
| TCCCAGACCCAATTGATTCC+TGG | 0.316498 | 7.3:-21540587 | None:intergenic |
| ATGGTAGAGGCAGGCCGATT+TGG | 0.323100 | 7.3:+21542115 | MS.gene41846:CDS |
| TTTCTACATGCTGGTATTAA+GGG | 0.332290 | 7.3:+21540906 | MS.gene41846:CDS |
| CTGCCTCAATTAATTGCCTT+TGG | 0.334524 | 7.3:+21541977 | MS.gene41846:CDS |
| ATGCAAACTGGGGAGATATT+GGG | 0.336399 | 7.3:+21541444 | MS.gene41846:CDS |
| CACCCAATTAGAACAAAATA+AGG | 0.345190 | 7.3:-21542265 | None:intergenic |
| AAAATTTGATTATGCATTAG+AGG | 0.346390 | 7.3:+21540788 | MS.gene41846:CDS |
| CTCATCTACTTACGCACTTC+AGG | 0.350347 | 7.3:+21542339 | MS.gene41846:CDS |
| CTAGACATCCTCATGGGAAA+TGG | 0.355262 | 7.3:+21541081 | MS.gene41846:CDS |
| AGATATGAATTTATGGTATC+AGG | 0.357593 | 7.3:+21541895 | MS.gene41846:CDS |
| GACCCAATTGATTCCTGGTC+TGG | 0.365674 | 7.3:-21540582 | None:intergenic |
| CTACGCTGCTGGTATTGAAA+TGG | 0.366488 | 7.3:-21541626 | None:intergenic |
| TTCTAACTTCATTGACTCCT+TGG | 0.366501 | 7.3:-21541699 | None:intergenic |
| TCCTGAACTTCGACAATCTC+GGG | 0.370817 | 7.3:-21541656 | None:intergenic |
| TCTGCAACTGTTTCACCAAT+TGG | 0.382568 | 7.3:-21542091 | None:intergenic |
| TCAATACTTTGGTCTGCCTC+TGG | 0.385140 | 7.3:-21541919 | None:intergenic |
| TGCTAACATGAAGTTCTATC+AGG | 0.386975 | 7.3:+21540992 | MS.gene41846:CDS |
| CCTGATCTAGATTCAGTAGA+AGG | 0.389502 | 7.3:+21542436 | MS.gene41846:CDS |
| GGGAGATATTGGGGCTCTAC+AGG | 0.390148 | 7.3:+21541454 | MS.gene41846:CDS |
| CTCCCAGCTGGAACCAGCTT+GGG | 0.390262 | 7.3:+21541871 | MS.gene41846:CDS |
| TGGTGAAACAGTTGCAGAAA+TGG | 0.392973 | 7.3:+21542096 | MS.gene41846:CDS |
| CTTCATTATTGTCAATACTT+TGG | 0.395680 | 7.3:-21541930 | None:intergenic |
| CTTCTAGTTGATTCTCAGTA+CGG | 0.400065 | 7.3:+21541281 | MS.gene41846:CDS |
| TATAGAATCTGGAACAAACT+TGG | 0.403612 | 7.3:+21541419 | MS.gene41846:CDS |
| GACCAGGAATCAATTGGGTC+TGG | 0.408789 | 7.3:+21540585 | MS.gene41846:CDS |
| TCCCCAGACCAGGAATCAAT+TGG | 0.410170 | 7.3:+21540579 | MS.gene41846:CDS |
| GCTGAAAATGCTATCGCTAA+TGG | 0.419287 | 7.3:+21541014 | MS.gene41846:CDS |
| AGAAGAATCGAGAGGCAGTT+AGG | 0.419787 | 7.3:+21541575 | MS.gene41846:CDS |
| GGAAGGCTTGGAGGTCTTTG+TGG | 0.422738 | 7.3:+21541035 | MS.gene41846:CDS |
| AACAGATCTGTTTCTATATG+TGG | 0.425148 | 7.3:+21541838 | MS.gene41846:CDS |
| ATACAAGAAGTAATCAAAAC+TGG | 0.426658 | 7.3:+21541773 | MS.gene41846:CDS |
| ACCCAATTGATTCCTGGTCT+GGG | 0.427381 | 7.3:-21540581 | None:intergenic |
| TTATGCTATTCGAATGTTGT+TGG | 0.428240 | 7.3:+21541205 | MS.gene41846:CDS |
| TCATGCACACACCCTTTCTC+TGG | 0.429401 | 7.3:+21539742 | None:intergenic |
| AACAGCTAGACCTCTGATAT+CGG | 0.430946 | 7.3:-21541135 | None:intergenic |
| AACAGAGTGCTTGGGCATTC+CGG | 0.431857 | 7.3:-21541513 | None:intergenic |
| TGAAGTTCAACCAACTCAAA+TGG | 0.433013 | 7.3:-21540765 | None:intergenic |
| TTCTAGTTGATTCTCAGTAC+GGG | 0.438562 | 7.3:+21541282 | MS.gene41846:CDS |
| TAGAAGAAGGGTCTATGTTA+TGG | 0.439703 | 7.3:+21541717 | MS.gene41846:CDS |
| CTTGGAGGTCTTTGTGGCAC+TGG | 0.440275 | 7.3:+21541041 | MS.gene41846:CDS |
| TAAATCTTCAACAGAGTGCT+TGG | 0.441724 | 7.3:-21541522 | None:intergenic |
| CTAACACAGATCACGTTCTC+TGG | 0.441774 | 7.3:-21542226 | None:intergenic |
| TTCTTAGAAGCGTTAATTCA+AGG | 0.443007 | 7.3:-21541112 | None:intergenic |
| CTTCCCAAGCTGGTTCCAGC+TGG | 0.444255 | 7.3:-21541874 | None:intergenic |
| TGCTGGTATTAAGGGCTTGT+GGG | 0.446395 | 7.3:+21540914 | MS.gene41846:CDS |
| CAGAGAACGTGATCTGTGTT+AGG | 0.451934 | 7.3:+21542227 | MS.gene41846:CDS |
| GGAGGATTCAGATGGGCAAA+AGG | 0.452093 | 7.3:+21541742 | MS.gene41846:CDS |
| CTCAATTAATTGCCTTTGGA+AGG | 0.452788 | 7.3:+21541981 | MS.gene41846:CDS |
| AATAGAGCTTCTCCTAGAAC+TGG | 0.453416 | 7.3:-21541182 | None:intergenic |
| TGTCATCTGGTGGTAGGTCT+CGG | 0.453644 | 7.3:+21540625 | MS.gene41846:CDS |
| TACGCTGCTGGTATTGAAAT+GGG | 0.457919 | 7.3:-21541625 | None:intergenic |
| ATCCCATAAACTATGACATA+TGG | 0.458143 | 7.3:+21542578 | MS.gene41846:CDS |
| GTCACAATTTCCACCAGAGC+TGG | 0.460018 | 7.3:-21542032 | None:intergenic |
| GGGCTCTCATCCCTCCCAGC+TGG | 0.467042 | 7.3:+21541859 | MS.gene41846:CDS |
| TAGACATCCTCATGGGAAAT+GGG | 0.467130 | 7.3:+21541082 | MS.gene41846:CDS |
| ACAAATACTGTGCTAGGATC+CGG | 0.468978 | 7.3:-21541257 | None:intergenic |
| GCTATCGCTAATGGAAGGCT+TGG | 0.469516 | 7.3:+21541023 | MS.gene41846:CDS |
| TATAAATTTGTTGATAGTGA+CGG | 0.471295 | 7.3:+21540666 | MS.gene41846:CDS |
| ACCACCAGAGTGAATGGAAA+TGG | 0.473208 | 7.3:+21541602 | MS.gene41846:CDS |
| CACTGTATTATGCAATATGC+CGG | 0.475591 | 7.3:+21541494 | MS.gene41846:CDS |
| GGAGATACCACCAGAGTGAA+TGG | 0.479369 | 7.3:+21541596 | MS.gene41846:CDS |
| CAAGCTGGTTCCAGCTGGGA+GGG | 0.480689 | 7.3:-21541869 | None:intergenic |
| ATTGGACTGATCACAAGAAC+AGG | 0.480991 | 7.3:-21542073 | None:intergenic |
| AAGAGGTCCAGTGTGTCATC+TGG | 0.482225 | 7.3:+21540612 | MS.gene41846:CDS |
| CTCTCAACTGCTACATCGGC+TGG | 0.483404 | 7.3:+21542181 | MS.gene41846:CDS |
| CCTCCCAGCTGGAACCAGCT+TGG | 0.487865 | 7.3:+21541870 | MS.gene41846:CDS |
| ATCCTGAACTTCGACAATCT+CGG | 0.488114 | 7.3:-21541657 | None:intergenic |
| TATAGAAACAGATCTGTTCC+TGG | 0.488142 | 7.3:-21541833 | None:intergenic |
| AGCCATATGTCATAGTTTAT+GGG | 0.488169 | 7.3:-21542580 | None:intergenic |
| CCTTCTACTGAATCTAGATC+AGG | 0.491986 | 7.3:-21542436 | None:intergenic |
| AATATTCATGAAGATGATCA+TGG | 0.492106 | 7.3:+21542619 | MS.gene41846:CDS |
| GTTCTTGTGATCAGTCCAAT+TGG | 0.498107 | 7.3:+21542076 | MS.gene41846:CDS |
| ATCGCTAATGGAAGGCTTGG+AGG | 0.498607 | 7.3:+21541026 | MS.gene41846:CDS |
| GAGAAATGAAGATTCATAGC+AGG | 0.501345 | 7.3:-21542319 | None:intergenic |
| CAAACTTGGGAATGCAAACT+GGG | 0.501616 | 7.3:+21541433 | MS.gene41846:CDS |
| TACAATGGAGAGAGACATCT+TGG | 0.502840 | 7.3:+21542464 | MS.gene41846:CDS |
| GAGTCAATGAAGTTAGAAGA+AGG | 0.503840 | 7.3:+21541704 | MS.gene41846:CDS |
| TGTCGAAGGCCCAGCTCTGG+TGG | 0.510024 | 7.3:+21542022 | MS.gene41846:CDS |
| CATTGTCGAAGGCCCAGCTC+TGG | 0.510153 | 7.3:+21542019 | MS.gene41846:CDS |
| ACCAGGAATCAATTGGGTCT+GGG | 0.511267 | 7.3:+21540586 | MS.gene41846:CDS |
| AGATTAATTCAGCAGAAGCT+TGG | 0.511891 | 7.3:+21542493 | MS.gene41846:CDS |
| ATAGAATCTGGAACAAACTT+GGG | 0.512068 | 7.3:+21541420 | MS.gene41846:CDS |
| AAATTTGATTATGCATTAGA+GGG | 0.512978 | 7.3:+21540789 | MS.gene41846:CDS |
| CTTCCAAAGGCAATTAATTG+AGG | 0.514234 | 7.3:-21541980 | None:intergenic |
| CTGGGCCTTCGACAATGACC+AGG | 0.517442 | 7.3:-21542013 | None:intergenic |
| ATGCTGGTATTAAGGGCTTG+TGG | 0.519513 | 7.3:+21540913 | MS.gene41846:CDS |
| TAGCGTCATCTGAACCAAAT+CGG | 0.519610 | 7.3:-21542129 | None:intergenic |
| AGAAGGGTCTATGTTATGGC+TGG | 0.520096 | 7.3:+21541721 | MS.gene41846:CDS |
| AAATCTTCAACAGAGTGCTT+GGG | 0.521067 | 7.3:-21541521 | None:intergenic |
| TTCCCAAGCTGGTTCCAGCT+GGG | 0.522150 | 7.3:-21541873 | None:intergenic |
| TGCAAACTGGGGAGATATTG+GGG | 0.525094 | 7.3:+21541445 | MS.gene41846:CDS |
| GCCATTTCCATTCACTCTGG+TGG | 0.525891 | 7.3:-21541603 | None:intergenic |
| GTAGAAGCATGAACAGCATT+AGG | 0.525938 | 7.3:-21540840 | None:intergenic |
| AGAAGAACAAATACTGTGCT+AGG | 0.527370 | 7.3:-21541263 | None:intergenic |
| AGCACTCTCAACTGCTACAT+CGG | 0.531267 | 7.3:+21542177 | MS.gene41846:CDS |
| AAATTCATATCTTCCCAAGC+TGG | 0.531371 | 7.3:-21541884 | None:intergenic |
| GTGGAAATTGTGACCACCCT+TGG | 0.533087 | 7.3:+21542041 | MS.gene41846:CDS |
| CTAGAACTGGTAAAGAAGGC+TGG | 0.534693 | 7.3:-21541169 | None:intergenic |
| TCTCCTAGAACTGGTAAAGA+AGG | 0.536896 | 7.3:-21541173 | None:intergenic |
| AACGTGATCTGTGTTAGGTC+TGG | 0.538417 | 7.3:+21542232 | MS.gene41846:CDS |
| CCCCAGACCAGGAATCAATT+GGG | 0.540792 | 7.3:+21540580 | MS.gene41846:CDS |
| GGAAATTGACAGCACATGCT+AGG | 0.541219 | 7.3:+21542645 | MS.gene41846:CDS |
| CCAGTGTGTCATCTGGTGGT+AGG | 0.544409 | 7.3:+21540619 | MS.gene41846:CDS |
| ATTGTGACCACCCTTGGTGC+GGG | 0.549931 | 7.3:+21542047 | MS.gene41846:CDS |
| CCAAGCTGGTTCCAGCTGGG+AGG | 0.553218 | 7.3:-21541870 | None:intergenic |
| GTTGCAGAAATGGTAGAGGC+AGG | 0.557961 | 7.3:+21542106 | MS.gene41846:CDS |
| AGTCAATGAAGTTAGAAGAA+GGG | 0.558174 | 7.3:+21541705 | MS.gene41846:CDS |
| GACTACGGCATGGAGACATC+AGG | 0.558917 | 7.3:+21542203 | MS.gene41846:CDS |
| ACTATGACATATGGCTGAGA+AGG | 0.559490 | 7.3:+21542587 | MS.gene41846:CDS |
| ATTTGATGTGCCATTTGAGT+TGG | 0.560840 | 7.3:+21540755 | MS.gene41846:CDS |
| CTGCTACATCGGCTGGACTA+CGG | 0.560902 | 7.3:+21542188 | MS.gene41846:CDS |
| ATGCTTTATTATTCATGCGG+TGG | 0.561436 | 7.3:+21542406 | MS.gene41846:CDS |
| TTGAAGACGTGAACTATGAT+CGG | 0.562266 | 7.3:-21541549 | None:intergenic |
| AGAGTGCTGATAAGCAATCA+TGG | 0.566608 | 7.3:-21542162 | None:intergenic |
| ACAGATCTGTTTCTATATGT+GGG | 0.571974 | 7.3:+21541839 | MS.gene41846:CDS |
| GAGGATTCAGATGGGCAAAA+GGG | 0.573389 | 7.3:+21541743 | MS.gene41846:CDS |
| CTGGTGGTAGGTCTCGGAAT+CGG | 0.574466 | 7.3:+21540631 | MS.gene41846:CDS |
| CAGGAGTCCCGCACCAAGGG+TGG | 0.579446 | 7.3:-21542054 | None:intergenic |
| CAGTAGAAGGAGCGCTACAA+TGG | 0.582919 | 7.3:+21542449 | MS.gene41846:CDS |
| TTGACAATAATGAAGCAGAA+AGG | 0.586050 | 7.3:+21541938 | MS.gene41846:CDS |
| TATATGCTTTATTATTCATG+CGG | 0.586795 | 7.3:+21542403 | MS.gene41846:CDS |
| AACAGTTGCAGAAATGGTAG+AGG | 0.587170 | 7.3:+21542102 | MS.gene41846:CDS |
| CTATTCGAATGTTGTTGGCA+AGG | 0.588289 | 7.3:+21541210 | MS.gene41846:CDS |
| TTATGAATGTGCTGCTGAGT+GGG | 0.588709 | 7.3:+21541361 | MS.gene41846:CDS |
| TCACAATTTCCACCAGAGCT+GGG | 0.590244 | 7.3:-21542031 | None:intergenic |
| TGGGCCATTTCCATTCACTC+TGG | 0.590821 | 7.3:-21541606 | None:intergenic |
| ATATTGCATAATACAGTGAA+AGG | 0.591146 | 7.3:-21541489 | None:intergenic |
| GGAGAGAGACATCTTGGTCA+AGG | 0.592311 | 7.3:+21542470 | MS.gene41846:CDS |
| GAACAGGAGTCCCGCACCAA+GGG | 0.594107 | 7.3:-21542057 | None:intergenic |
| AATAATTCTAGACATCCTCA+TGG | 0.597418 | 7.3:+21541074 | MS.gene41846:CDS |
| TTATGTCAAGGTCGATTCCA+AGG | 0.598570 | 7.3:+21541682 | MS.gene41846:CDS |
| ACATATGGCTGAGAAGGTTG+AGG | 0.598573 | 7.3:+21542593 | MS.gene41846:CDS |
| GATATCAGAGGTCTAGCTGT+TGG | 0.599351 | 7.3:+21541137 | MS.gene41846:CDS |
| ATAGAAACAGATCTGTTCCT+GGG | 0.603573 | 7.3:-21541832 | None:intergenic |
| TGTAGGTAGATCCCCAGACC+AGG | 0.603796 | 7.3:+21540569 | MS.gene41846:intron |
| TACACCCTGGTCATTGTCGA+AGG | 0.604163 | 7.3:+21542008 | MS.gene41846:CDS |
| GATTATGTCGACAGTCTATG+TGG | 0.604719 | 7.3:+21542547 | MS.gene41846:CDS |
| CCTGAACTTCGACAATCTCG+GGG | 0.605553 | 7.3:-21541655 | None:intergenic |
| TCATGAAGATGATCATGGAA+AGG | 0.606776 | 7.3:+21542624 | MS.gene41846:CDS |
| GCATCTTATGTTGAAGACCC+AGG | 0.608281 | 7.3:+21541815 | MS.gene41846:CDS |
| AATAATAAAGCATATAGACT+AGG | 0.609211 | 7.3:-21542396 | None:intergenic |
| TCTAGTTGATTCTCAGTACG+GGG | 0.609471 | 7.3:+21541283 | MS.gene41846:CDS |
| AGAAATGAAGATTCATAGCA+GGG | 0.610581 | 7.3:-21542318 | None:intergenic |
| CCCAATTGATTCCTGGTCTG+GGG | 0.612377 | 7.3:-21540580 | None:intergenic |
| TTATGGCTGGAGGATTCAGA+TGG | 0.613979 | 7.3:+21541734 | MS.gene41846:CDS |
| TGGTAGGTCTCGGAATCGGA+AGG | 0.614968 | 7.3:+21540635 | MS.gene41846:CDS |
| CTCTATCTTCAAGAATAGCA+TGG | 0.617992 | 7.3:-21542291 | None:intergenic |
| ATAATTCTAGACATCCTCAT+GGG | 0.619776 | 7.3:+21541075 | MS.gene41846:CDS |
| AGGGTCTATGTTATGGCTGG+AGG | 0.620896 | 7.3:+21541724 | MS.gene41846:CDS |
| ACATCGGCTGGACTACGGCA+TGG | 0.621645 | 7.3:+21542193 | MS.gene41846:CDS |
| CAATTGGGTCTGGGACAAAG+AGG | 0.627588 | 7.3:+21540595 | MS.gene41846:CDS |
| AAAATGCTATCGCTAATGGA+AGG | 0.633589 | 7.3:+21541018 | MS.gene41846:CDS |
| AATTGTGACCACCCTTGGTG+CGG | 0.639799 | 7.3:+21542046 | MS.gene41846:CDS |
| TGGTATTAAGGGCTTGTGGG+AGG | 0.641546 | 7.3:+21540917 | MS.gene41846:CDS |
| AGGGTGTATGAGCCTTCCAA+AGG | 0.645844 | 7.3:-21541993 | None:intergenic |
| TCTACTTACGCACTTCAGGA+AGG | 0.648241 | 7.3:+21542343 | MS.gene41846:CDS |
| AGGTCCAGTGTGTCATCTGG+TGG | 0.648424 | 7.3:+21540615 | MS.gene41846:CDS |
| TAGGCTTTCTGCATCAGATG+CGG | 0.649383 | 7.3:-21542377 | None:intergenic |
| AATTTGATTATGCATTAGAG+GGG | 0.649477 | 7.3:+21540790 | MS.gene41846:CDS |
| AGCAAAAGCTTTCAGCACAG+TGG | 0.657474 | 7.3:-21542524 | None:intergenic |
| AGTTCAGGATGATTATGTCA+AGG | 0.662091 | 7.3:+21541670 | MS.gene41846:CDS |
| CTAGTTGATTCTCAGTACGG+GGG | 0.666070 | 7.3:+21541284 | MS.gene41846:CDS |
| ATTTATGGTATCAGGTCCAG+AGG | 0.666301 | 7.3:+21541903 | MS.gene41846:CDS |
| TTTATGAATGTGCTGCTGAG+TGG | 0.667528 | 7.3:+21541360 | MS.gene41846:CDS |
| TTTGGAAGGCTCATACACCC+TGG | 0.667640 | 7.3:+21541995 | MS.gene41846:CDS |
| AGAACAGGAGTCCCGCACCA+AGG | 0.668010 | 7.3:-21542058 | None:intergenic |
| TATGGCTGGAGGATTCAGAT+GGG | 0.675476 | 7.3:+21541735 | MS.gene41846:CDS |
| ATTATGTCGACAGTCTATGT+GGG | 0.678690 | 7.3:+21542548 | MS.gene41846:CDS |
| AGATGATCCCATTTCCCATG+AGG | 0.683325 | 7.3:-21541089 | None:intergenic |
| CTTCTAAGAACCGATATCAG+AGG | 0.684653 | 7.3:+21541125 | MS.gene41846:CDS |
| CCTACCACCAGATGACACAC+TGG | 0.697213 | 7.3:-21540619 | None:intergenic |
| TTCAAACAAGAAGAATCGAG+AGG | 0.700685 | 7.3:+21541567 | MS.gene41846:CDS |
| TCTGTGTTAGGTCTGGTGTG+AGG | 0.703035 | 7.3:+21542239 | MS.gene41846:CDS |
| TGGGCCTTCGACAATGACCA+GGG | 0.704817 | 7.3:-21542012 | None:intergenic |
| GAACTGGTAAAGAAGGCTGG+CGG | 0.719336 | 7.3:-21541166 | None:intergenic |
| CTGAACTTCGACAATCTCGG+GGG | 0.725557 | 7.3:-21541654 | None:intergenic |
| AAACTTGGGAATGCAAACTG+GGG | 0.727261 | 7.3:+21541434 | MS.gene41846:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATACTGATATATTAAATC+TGG | + | chr7.3:21540158-21540177 | MS.gene41846:intron | 15.0% |
| !! | TATACTGATATATTAAATCT+GGG | + | chr7.3:21540159-21540178 | MS.gene41846:intron | 15.0% |
| !!! | TATAATGATTATTCCTTTTT+AGG | - | chr7.3:21540521-21540540 | None:intergenic | 15.0% |
| !! | AAAATTTGATTATGCATTAG+AGG | + | chr7.3:21540788-21540807 | MS.gene41846:CDS | 20.0% |
| !! | AAACAAAACACATGTATATT+AGG | + | chr7.3:21539773-21539792 | MS.gene41846:intron | 20.0% |
| !! | AAATTTGATTATGCATTAGA+GGG | + | chr7.3:21540789-21540808 | MS.gene41846:CDS | 20.0% |
| !! | AATAATAAAGCATATAGACT+AGG | - | chr7.3:21542399-21542418 | None:intergenic | 20.0% |
| !! | AATATAATATATAGTGGTTG+CGG | + | chr7.3:21540340-21540359 | MS.gene41846:intron | 20.0% |
| !! | ATATACTGCTATATATTGAT+AGG | + | chr7.3:21540122-21540141 | MS.gene41846:intron | 20.0% |
| !! | CACTTCAATATAATATATAG+TGG | + | chr7.3:21540334-21540353 | MS.gene41846:intron | 20.0% |
| !!! | AACCTTATTTTGTTCTAATT+GGG | + | chr7.3:21542263-21542282 | MS.gene41846:CDS | 20.0% |
| !!! | TATAAATTTGTTGATAGTGA+CGG | + | chr7.3:21540666-21540685 | MS.gene41846:CDS | 20.0% |
| !!! | TATATGCTTTATTATTCATG+CGG | + | chr7.3:21542403-21542422 | MS.gene41846:CDS | 20.0% |
| ! | AATATTCATGAAGATGATCA+TGG | + | chr7.3:21542619-21542638 | MS.gene41846:CDS | 25.0% |
| ! | AATTTGATTATGCATTAGAG+GGG | + | chr7.3:21540790-21540809 | MS.gene41846:CDS | 25.0% |
| ! | ACAAATTGCTTTCTTAAAGT+AGG | + | chr7.3:21539800-21539819 | MS.gene41846:intron | 25.0% |
| ! | AGATATGAATTTATGGTATC+AGG | + | chr7.3:21541895-21541914 | MS.gene41846:CDS | 25.0% |
| ! | ATACAAGAAGTAATCAAAAC+TGG | + | chr7.3:21541773-21541792 | MS.gene41846:CDS | 25.0% |
| ! | ATATAATATATAGTGGTTGC+GGG | + | chr7.3:21540341-21540360 | MS.gene41846:intron | 25.0% |
| ! | ATATTGCATAATACAGTGAA+AGG | - | chr7.3:21541492-21541511 | None:intergenic | 25.0% |
| ! | CATCTAACTATAAGTGATTA+AGG | + | chr7.3:21540370-21540389 | MS.gene41846:intron | 25.0% |
| ! | CTTCATTATTGTCAATACTT+TGG | - | chr7.3:21541933-21541952 | None:intergenic | 25.0% |
| ! | GATTTCTTTAAGTAGACATA+TGG | + | chr7.3:21540015-21540034 | MS.gene41846:intron | 25.0% |
| ! | TGAAAATTCAGAGATAAGAA+AGG | - | chr7.3:21540439-21540458 | None:intergenic | 25.0% |
| ! | TGAATGAAAAACTTGTAGAT+TGG | + | chr7.3:21540691-21540710 | MS.gene41846:CDS | 25.0% |
| ! | TGACAATAGAAATTCAACAA+AGG | - | chr7.3:21540404-21540423 | None:intergenic | 25.0% |
| ! | TTAAATTTACCAGCAAAGAA+GGG | + | chr7.3:21540203-21540222 | MS.gene41846:intron | 25.0% |
| ! | TTGTTCCAGATTCTATAAAT+TGG | - | chr7.3:21541416-21541435 | None:intergenic | 25.0% |
| ! | TTTCTCCAATTTATAGAATC+TGG | + | chr7.3:21541408-21541427 | MS.gene41846:CDS | 25.0% |
| !! | ACTTTAAGAAAGCAATTTGT+GGG | - | chr7.3:21539800-21539819 | None:intergenic | 25.0% |
| !! | TACTTTAAGAAAGCAATTTG+TGG | - | chr7.3:21539801-21539820 | None:intergenic | 25.0% |
| !!! | AATGATTATTCCTTTTTAGG+AGG | - | chr7.3:21540518-21540537 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTGCACATATGTT+AGG | + | chr7.3:21539949-21539968 | MS.gene41846:intron | 25.0% |
| !!! | CAACCTTATTTTGTTCTAAT+TGG | + | chr7.3:21542262-21542281 | MS.gene41846:CDS | 25.0% |
| !!! | TTATTTTGTTCTAATTGGGT+GGG | + | chr7.3:21542267-21542286 | MS.gene41846:CDS | 25.0% |
| AATAATTCTAGACATCCTCA+TGG | + | chr7.3:21541074-21541093 | MS.gene41846:CDS | 30.0% | |
| AGAAATGAAGATTCATAGCA+GGG | - | chr7.3:21542321-21542340 | None:intergenic | 30.0% | |
| AGCCATATGTCATAGTTTAT+GGG | - | chr7.3:21542583-21542602 | None:intergenic | 30.0% | |
| AGTCAATGAAGTTAGAAGAA+GGG | + | chr7.3:21541705-21541724 | MS.gene41846:CDS | 30.0% | |
| ATAATTCTAGACATCCTCAT+GGG | + | chr7.3:21541075-21541094 | MS.gene41846:CDS | 30.0% | |
| ATCCCATAAACTATGACATA+TGG | + | chr7.3:21542578-21542597 | MS.gene41846:CDS | 30.0% | |
| ATGTCATAGTTTATGGGATA+TGG | - | chr7.3:21542577-21542596 | None:intergenic | 30.0% | |
| CACCCAATTAGAACAAAATA+AGG | - | chr7.3:21542268-21542287 | None:intergenic | 30.0% | |
| CTTGGGAAGATATGAATTTA+TGG | + | chr7.3:21541888-21541907 | MS.gene41846:CDS | 30.0% | |
| GAAGTTTGATACCTATTTGT+AGG | + | chr7.3:21540552-21540571 | MS.gene41846:intron | 30.0% | |
| GAGATCAAAATGATCAAACA+TGG | - | chr7.3:21540315-21540334 | None:intergenic | 30.0% | |
| GAGCTTAAGAAGAAATTTCA+AGG | + | chr7.3:21540264-21540283 | MS.gene41846:intron | 30.0% | |
| GTGTTTATACTTATAGTCGA+CGG | + | chr7.3:21540077-21540096 | MS.gene41846:intron | 30.0% | |
| GTTAAATTTACCAGCAAAGA+AGG | + | chr7.3:21540202-21540221 | MS.gene41846:intron | 30.0% | |
| TTATGCTATTCGAATGTTGT+TGG | + | chr7.3:21541205-21541224 | MS.gene41846:CDS | 30.0% | |
| TTGACAATAATGAAGCAGAA+AGG | + | chr7.3:21541938-21541957 | MS.gene41846:CDS | 30.0% | |
| TTTCTACATGCTGGTATTAA+GGG | + | chr7.3:21540906-21540925 | MS.gene41846:CDS | 30.0% | |
| TTTCTACTATCCTCCTAAAA+AGG | + | chr7.3:21540505-21540524 | MS.gene41846:intron | 30.0% | |
| ! | ATAGAATCTGGAACAAACTT+GGG | + | chr7.3:21541420-21541439 | MS.gene41846:CDS | 30.0% |
| ! | ATTGAAGATTTTCTACATGC+TGG | + | chr7.3:21540897-21540916 | MS.gene41846:CDS | 30.0% |
| ! | TAACTTTTATGCACCCTATA+AGG | + | chr7.3:21539893-21539912 | MS.gene41846:intron | 30.0% |
| ! | TATAGAATCTGGAACAAACT+TGG | + | chr7.3:21541419-21541438 | MS.gene41846:CDS | 30.0% |
| ! | TATCTCTGAATTTTCAGTTC+AGG | + | chr7.3:21540443-21540462 | MS.gene41846:intron | 30.0% |
| ! | TATTTTGTTCTAATTGGGTG+GGG | + | chr7.3:21542268-21542287 | MS.gene41846:CDS | 30.0% |
| ! | TTTTCTACATGCTGGTATTA+AGG | + | chr7.3:21540905-21540924 | MS.gene41846:CDS | 30.0% |
| !! | AACAGATCTGTTTCTATATG+TGG | + | chr7.3:21541838-21541857 | MS.gene41846:CDS | 30.0% |
| !! | ACAGATCTGTTTCTATATGT+GGG | + | chr7.3:21541839-21541858 | MS.gene41846:CDS | 30.0% |
| !! | TTCTTAGAAGCGTTAATTCA+AGG | - | chr7.3:21541115-21541134 | None:intergenic | 30.0% |
| !!! | CTTATTTTGTTCTAATTGGG+TGG | + | chr7.3:21542266-21542285 | MS.gene41846:CDS | 30.0% |
| !!! | GTCTTGGTTTTTTTTTCTTC+TGG | + | chr7.3:21540055-21540074 | MS.gene41846:intron | 30.0% |
| !!! | TTTTTTCAGTACCAGAGAAA+GGG | - | chr7.3:21539756-21539775 | None:intergenic | 30.0% |
| AAAATGCTATCGCTAATGGA+AGG | + | chr7.3:21541018-21541037 | MS.gene41846:CDS | 35.0% | |
| AAATTCATATCTTCCCAAGC+TGG | - | chr7.3:21541887-21541906 | None:intergenic | 35.0% | |
| AGAAGAACAAATACTGTGCT+AGG | - | chr7.3:21541266-21541285 | None:intergenic | 35.0% | |
| AGATTAATTCAGCAGAAGCT+TGG | + | chr7.3:21542493-21542512 | MS.gene41846:CDS | 35.0% | |
| AGTTCAGGATGATTATGTCA+AGG | + | chr7.3:21541670-21541689 | MS.gene41846:CDS | 35.0% | |
| ATAGAAACAGATCTGTTCCT+GGG | - | chr7.3:21541835-21541854 | None:intergenic | 35.0% | |
| ATCAGAGTTGTGTCCTTATA+GGG | - | chr7.3:21539909-21539928 | None:intergenic | 35.0% | |
| ATTATGTCGACAGTCTATGT+GGG | + | chr7.3:21542548-21542567 | MS.gene41846:CDS | 35.0% | |
| CACTGTATTATGCAATATGC+CGG | + | chr7.3:21541494-21541513 | MS.gene41846:CDS | 35.0% | |
| CAGCCATATGTCATAGTTTA+TGG | - | chr7.3:21542584-21542603 | None:intergenic | 35.0% | |
| CTCAATTAATTGCCTTTGGA+AGG | + | chr7.3:21541981-21542000 | MS.gene41846:CDS | 35.0% | |
| CTCTATCTTCAAGAATAGCA+TGG | - | chr7.3:21542294-21542313 | None:intergenic | 35.0% | |
| CTTCCAAAGGCAATTAATTG+AGG | - | chr7.3:21541983-21542002 | None:intergenic | 35.0% | |
| GAGAAATGAAGATTCATAGC+AGG | - | chr7.3:21542322-21542341 | None:intergenic | 35.0% | |
| GAGTCAATGAAGTTAGAAGA+AGG | + | chr7.3:21541704-21541723 | MS.gene41846:CDS | 35.0% | |
| GCTTGTAAGTACTAGAGTAA+AGG | + | chr7.3:21539866-21539885 | MS.gene41846:intron | 35.0% | |
| TAGAAGAAGGGTCTATGTTA+TGG | + | chr7.3:21541717-21541736 | MS.gene41846:CDS | 35.0% | |
| TATAGAAACAGATCTGTTCC+TGG | - | chr7.3:21541836-21541855 | None:intergenic | 35.0% | |
| TATTAAATCTGGGCATGCAA+AGG | + | chr7.3:21540169-21540188 | MS.gene41846:intron | 35.0% | |
| TCATGAAGATGATCATGGAA+AGG | + | chr7.3:21542624-21542643 | MS.gene41846:CDS | 35.0% | |
| TGAAGTTCAACCAACTCAAA+TGG | - | chr7.3:21540768-21540787 | None:intergenic | 35.0% | |
| TGCTAACATGAAGTTCTATC+AGG | + | chr7.3:21540992-21541011 | MS.gene41846:CDS | 35.0% | |
| TTCAAACAAGAAGAATCGAG+AGG | + | chr7.3:21541567-21541586 | MS.gene41846:CDS | 35.0% | |
| TTGAAGACGTGAACTATGAT+CGG | - | chr7.3:21541552-21541571 | None:intergenic | 35.0% | |
| ! | AAATCTTCAACAGAGTGCTT+GGG | - | chr7.3:21541524-21541543 | None:intergenic | 35.0% |
| ! | ATGCTTTATTATTCATGCGG+TGG | + | chr7.3:21542406-21542425 | MS.gene41846:CDS | 35.0% |
| ! | CTTCTAGTTGATTCTCAGTA+CGG | + | chr7.3:21541281-21541300 | MS.gene41846:CDS | 35.0% |
| ! | TAAATCTTCAACAGAGTGCT+TGG | - | chr7.3:21541525-21541544 | None:intergenic | 35.0% |
| ! | TTCTAGTTGATTCTCAGTAC+GGG | + | chr7.3:21541282-21541301 | MS.gene41846:CDS | 35.0% |
| !! | ATTTGATGTGCCATTTGAGT+TGG | + | chr7.3:21540755-21540774 | MS.gene41846:CDS | 35.0% |
| !! | TTCTAACTTCATTGACTCCT+TGG | - | chr7.3:21541702-21541721 | None:intergenic | 35.0% |
| !!! | GTTTTTTCAGTACCAGAGAA+AGG | - | chr7.3:21539757-21539776 | None:intergenic | 35.0% |
| AAACTTGGGAATGCAAACTG+GGG | + | chr7.3:21541434-21541453 | MS.gene41846:CDS | 40.0% | |
| AACAGCTAGACCTCTGATAT+CGG | - | chr7.3:21541138-21541157 | None:intergenic | 40.0% | |
| AACAGTTGCAGAAATGGTAG+AGG | + | chr7.3:21542102-21542121 | MS.gene41846:CDS | 40.0% | |
| AAGCATGTGCAAGTGTGTTA+AGG | - | chr7.3:21539850-21539869 | None:intergenic | 40.0% | |
| AATAGAGCTTCTCCTAGAAC+TGG | - | chr7.3:21541185-21541204 | None:intergenic | 40.0% | |
| AATGCAAACTGGGGAGATAT+TGG | + | chr7.3:21541443-21541462 | MS.gene41846:CDS | 40.0% | |
| ACAAACTTGGGAATGCAAAC+TGG | + | chr7.3:21541432-21541451 | MS.gene41846:CDS | 40.0% | |
| ACAAATACTGTGCTAGGATC+CGG | - | chr7.3:21541260-21541279 | None:intergenic | 40.0% | |
| ACTATGACATATGGCTGAGA+AGG | + | chr7.3:21542587-21542606 | MS.gene41846:CDS | 40.0% | |
| AGCATGTGCAAGTGTGTTAA+GGG | - | chr7.3:21539849-21539868 | None:intergenic | 40.0% | |
| ATCAAACATGGTGCATCCTA+GGG | - | chr7.3:21540303-21540322 | None:intergenic | 40.0% | |
| ATCCTGAACTTCGACAATCT+CGG | - | chr7.3:21541660-21541679 | None:intergenic | 40.0% | |
| ATGCAAACTGGGGAGATATT+GGG | + | chr7.3:21541444-21541463 | MS.gene41846:CDS | 40.0% | |
| ATTGGACTGATCACAAGAAC+AGG | - | chr7.3:21542076-21542095 | None:intergenic | 40.0% | |
| ATTTACCAGCAAAGAAGGGA+AGG | + | chr7.3:21540207-21540226 | MS.gene41846:intron | 40.0% | |
| ATTTATGGTATCAGGTCCAG+AGG | + | chr7.3:21541903-21541922 | MS.gene41846:CDS | 40.0% | |
| CAAACTTGGGAATGCAAACT+GGG | + | chr7.3:21541433-21541452 | MS.gene41846:CDS | 40.0% | |
| CCTGATCTAGATTCAGTAGA+AGG | + | chr7.3:21542436-21542455 | MS.gene41846:CDS | 40.0% | |
| CCTTCTACTGAATCTAGATC+AGG | - | chr7.3:21542439-21542458 | None:intergenic | 40.0% | |
| CTATTCGAATGTTGTTGGCA+AGG | + | chr7.3:21541210-21541229 | MS.gene41846:CDS | 40.0% | |
| CTGCCTCAATTAATTGCCTT+TGG | + | chr7.3:21541977-21541996 | MS.gene41846:CDS | 40.0% | |
| GAGTAGACTGAGTTTCTTTC+CGG | + | chr7.3:21541238-21541257 | MS.gene41846:CDS | 40.0% | |
| GATCAGAGTTGTGTCCTTAT+AGG | - | chr7.3:21539910-21539929 | None:intergenic | 40.0% | |
| GATTATGTCGACAGTCTATG+TGG | + | chr7.3:21542547-21542566 | MS.gene41846:CDS | 40.0% | |
| GCTGAAAATGCTATCGCTAA+TGG | + | chr7.3:21541014-21541033 | MS.gene41846:CDS | 40.0% | |
| GGTCATACATTCTTCACTAG+TGG | - | chr7.3:21539828-21539847 | None:intergenic | 40.0% | |
| GTTCTTGTGATCAGTCCAAT+TGG | + | chr7.3:21542076-21542095 | MS.gene41846:CDS | 40.0% | |
| TACAAACAAGCCGCAGAAAA+AGG | - | chr7.3:21540969-21540988 | None:intergenic | 40.0% | |
| TACAATGGAGAGAGACATCT+TGG | + | chr7.3:21542464-21542483 | MS.gene41846:CDS | 40.0% | |
| TAGACATCCTCATGGGAAAT+GGG | + | chr7.3:21541082-21541101 | MS.gene41846:CDS | 40.0% | |
| TAGCGTCATCTGAACCAAAT+CGG | - | chr7.3:21542132-21542151 | None:intergenic | 40.0% | |
| TCTCCTAGAACTGGTAAAGA+AGG | - | chr7.3:21541176-21541195 | None:intergenic | 40.0% | |
| TCTGCAACTGTTTCACCAAT+TGG | - | chr7.3:21542094-21542113 | None:intergenic | 40.0% | |
| TGGTGAAACAGTTGCAGAAA+TGG | + | chr7.3:21542096-21542115 | MS.gene41846:CDS | 40.0% | |
| TTTACCAGCAAAGAAGGGAA+GGG | + | chr7.3:21540208-21540227 | MS.gene41846:intron | 40.0% | |
| ! | CTTCTAAGAACCGATATCAG+AGG | + | chr7.3:21541125-21541144 | MS.gene41846:CDS | 40.0% |
| ! | GTAGAAGCATGAACAGCATT+AGG | - | chr7.3:21540843-21540862 | None:intergenic | 40.0% |
| ! | TACGCTGCTGGTATTGAAAT+GGG | - | chr7.3:21541628-21541647 | None:intergenic | 40.0% |
| ! | TCTAGTTGATTCTCAGTACG+GGG | + | chr7.3:21541283-21541302 | MS.gene41846:CDS | 40.0% |
| ! | TTATGAATGTGCTGCTGAGT+GGG | + | chr7.3:21541361-21541380 | MS.gene41846:CDS | 40.0% |
| ! | TTATGTCAAGGTCGATTCCA+AGG | + | chr7.3:21541682-21541701 | MS.gene41846:CDS | 40.0% |
| ! | TTTATGAATGTGCTGCTGAG+TGG | + | chr7.3:21541360-21541379 | MS.gene41846:CDS | 40.0% |
| !! | AGAGTGCTGATAAGCAATCA+TGG | - | chr7.3:21542165-21542184 | None:intergenic | 40.0% |
| AACGTGATCTGTGTTAGGTC+TGG | + | chr7.3:21542232-21542251 | MS.gene41846:CDS | 45.0% | |
| ACATATGGCTGAGAAGGTTG+AGG | + | chr7.3:21542593-21542612 | MS.gene41846:CDS | 45.0% | |
| ACCACCAGAGTGAATGGAAA+TGG | + | chr7.3:21541602-21541621 | MS.gene41846:CDS | 45.0% | |
| ACCAGGAATCAATTGGGTCT+GGG | + | chr7.3:21540586-21540605 | MS.gene41846:CDS | 45.0% | |
| AGAAGAATCGAGAGGCAGTT+AGG | + | chr7.3:21541575-21541594 | MS.gene41846:CDS | 45.0% | |
| AGAAGGGTCTATGTTATGGC+TGG | + | chr7.3:21541721-21541740 | MS.gene41846:CDS | 45.0% | |
| AGAGCAAAATAGTAACCGCG+AGG | + | chr7.3:21539978-21539997 | MS.gene41846:intron | 45.0% | |
| AGATGATCCCATTTCCCATG+AGG | - | chr7.3:21541092-21541111 | None:intergenic | 45.0% | |
| AGCAAAAGCTTTCAGCACAG+TGG | - | chr7.3:21542527-21542546 | None:intergenic | 45.0% | |
| AGCAAAATAGTAACCGCGAG+GGG | + | chr7.3:21539980-21539999 | MS.gene41846:intron | 45.0% | |
| AGCACTCTCAACTGCTACAT+CGG | + | chr7.3:21542177-21542196 | MS.gene41846:CDS | 45.0% | |
| ATGCTGGTATTAAGGGCTTG+TGG | + | chr7.3:21540913-21540932 | MS.gene41846:CDS | 45.0% | |
| CAAGACCAGTCTCGTAGAAA+CGG | - | chr7.3:21540041-21540060 | None:intergenic | 45.0% | |
| CAGAGAACGTGATCTGTGTT+AGG | + | chr7.3:21542227-21542246 | MS.gene41846:CDS | 45.0% | |
| CAGCCTTCTTTACCAGTTCT+AGG | + | chr7.3:21541170-21541189 | MS.gene41846:CDS | 45.0% | |
| CTAACACAGATCACGTTCTC+TGG | - | chr7.3:21542229-21542248 | None:intergenic | 45.0% | |
| CTAGAACTGGTAAAGAAGGC+TGG | - | chr7.3:21541172-21541191 | None:intergenic | 45.0% | |
| CTAGACATCCTCATGGGAAA+TGG | + | chr7.3:21541081-21541100 | MS.gene41846:CDS | 45.0% | |
| CTCATCTACTTACGCACTTC+AGG | + | chr7.3:21542339-21542358 | MS.gene41846:CDS | 45.0% | |
| CTGGGGATCTACCTACAAAT+AGG | - | chr7.3:21540566-21540585 | None:intergenic | 45.0% | |
| GAGCAAAATAGTAACCGCGA+GGG | + | chr7.3:21539979-21539998 | MS.gene41846:intron | 45.0% | |
| GAGGATTCAGATGGGCAAAA+GGG | + | chr7.3:21541743-21541762 | MS.gene41846:CDS | 45.0% | |
| GATATCAGAGGTCTAGCTGT+TGG | + | chr7.3:21541137-21541156 | MS.gene41846:CDS | 45.0% | |
| GATCAAACATGGTGCATCCT+AGG | - | chr7.3:21540304-21540323 | None:intergenic | 45.0% | |
| GCATCTTATGTTGAAGACCC+AGG | + | chr7.3:21541815-21541834 | MS.gene41846:CDS | 45.0% | |
| GGGGGAGTTGTAAAAGTTGA+AGG | + | chr7.3:21541302-21541321 | MS.gene41846:CDS | 45.0% | |
| TAGGCTTTCTGCATCAGATG+CGG | - | chr7.3:21542380-21542399 | None:intergenic | 45.0% | |
| TATGGCTGGAGGATTCAGAT+GGG | + | chr7.3:21541735-21541754 | MS.gene41846:CDS | 45.0% | |
| TCAATACTTTGGTCTGCCTC+TGG | - | chr7.3:21541922-21541941 | None:intergenic | 45.0% | |
| TCACAATTTCCACCAGAGCT+GGG | - | chr7.3:21542034-21542053 | None:intergenic | 45.0% | |
| TCCTGAACTTCGACAATCTC+GGG | - | chr7.3:21541659-21541678 | None:intergenic | 45.0% | |
| TCTACTTACGCACTTCAGGA+AGG | + | chr7.3:21542343-21542362 | MS.gene41846:CDS | 45.0% | |
| TGCAAACTGGGGAGATATTG+GGG | + | chr7.3:21541445-21541464 | MS.gene41846:CDS | 45.0% | |
| TGCTGGTATTAAGGGCTTGT+GGG | + | chr7.3:21540914-21540933 | MS.gene41846:CDS | 45.0% | |
| TGCTGTGCGGAGTTAATATG+TGG | + | chr7.3:21540232-21540251 | MS.gene41846:intron | 45.0% | |
| TTACCAGCAAAGAAGGGAAG+GGG | + | chr7.3:21540209-21540228 | MS.gene41846:intron | 45.0% | |
| TTATGGCTGGAGGATTCAGA+TGG | + | chr7.3:21541734-21541753 | MS.gene41846:CDS | 45.0% | |
| ! | ACCCAATTGATTCCTGGTCT+GGG | - | chr7.3:21540584-21540603 | None:intergenic | 45.0% |
| ! | CTACGCTGCTGGTATTGAAA+TGG | - | chr7.3:21541629-21541648 | None:intergenic | 45.0% |
| ! | CTAGTTGATTCTCAGTACGG+GGG | + | chr7.3:21541284-21541303 | MS.gene41846:CDS | 45.0% |
| ! | TGAGCCTATGCCTTTTTCTG+CGG | + | chr7.3:21540956-21540975 | MS.gene41846:CDS | 45.0% |
| AAGAGGTCCAGTGTGTCATC+TGG | + | chr7.3:21540612-21540631 | MS.gene41846:CDS | 50.0% | |
| AATTGTGACCACCCTTGGTG+CGG | + | chr7.3:21542046-21542065 | MS.gene41846:CDS | 50.0% | |
| AGGGTCTATGTTATGGCTGG+AGG | + | chr7.3:21541724-21541743 | MS.gene41846:CDS | 50.0% | |
| AGGGTGTATGAGCCTTCCAA+AGG | - | chr7.3:21541996-21542015 | None:intergenic | 50.0% | |
| ATCGCTAATGGAAGGCTTGG+AGG | + | chr7.3:21541026-21541045 | MS.gene41846:CDS | 50.0% | |
| ATGGTGCATCCTAGGGAAGT+TGG | - | chr7.3:21540296-21540315 | None:intergenic | 50.0% | |
| CACATTCAGTAATCCCCTCG+CGG | - | chr7.3:21539996-21540015 | None:intergenic | 50.0% | |
| CCCCAGACCAGGAATCAATT+GGG | + | chr7.3:21540580-21540599 | MS.gene41846:CDS | 50.0% | |
| CCTGAACTTCGACAATCTCG+GGG | - | chr7.3:21541658-21541677 | None:intergenic | 50.0% | |
| CTGAACTTCGACAATCTCGG+GGG | - | chr7.3:21541657-21541676 | None:intergenic | 50.0% | |
| GAACTGGTAAAGAAGGCTGG+CGG | - | chr7.3:21541169-21541188 | None:intergenic | 50.0% | |
| GACCAGGAATCAATTGGGTC+TGG | + | chr7.3:21540585-21540604 | MS.gene41846:CDS | 50.0% | |
| GCCATTTCCATTCACTCTGG+TGG | - | chr7.3:21541606-21541625 | None:intergenic | 50.0% | |
| GCTATCGCTAATGGAAGGCT+TGG | + | chr7.3:21541023-21541042 | MS.gene41846:CDS | 50.0% | |
| GGAGAGAGACATCTTGGTCA+AGG | + | chr7.3:21542470-21542489 | MS.gene41846:CDS | 50.0% | |
| GGAGATACCACCAGAGTGAA+TGG | + | chr7.3:21541596-21541615 | MS.gene41846:CDS | 50.0% | |
| GGAGGATTCAGATGGGCAAA+AGG | + | chr7.3:21541742-21541761 | MS.gene41846:CDS | 50.0% | |
| GTCACAATTTCCACCAGAGC+TGG | - | chr7.3:21542035-21542054 | None:intergenic | 50.0% | |
| GTGGAAATTGTGACCACCCT+TGG | + | chr7.3:21542041-21542060 | MS.gene41846:CDS | 50.0% | |
| GTTGCAGAAATGGTAGAGGC+AGG | + | chr7.3:21542106-21542125 | MS.gene41846:CDS | 50.0% | |
| TACACCCTGGTCATTGTCGA+AGG | + | chr7.3:21542008-21542027 | MS.gene41846:CDS | 50.0% | |
| TATGGCCGTTTCTACGAGAC+TGG | + | chr7.3:21540033-21540052 | MS.gene41846:intron | 50.0% | |
| TCCCCAGACCAGGAATCAAT+TGG | + | chr7.3:21540579-21540598 | MS.gene41846:CDS | 50.0% | |
| TCTGTGTTAGGTCTGGTGTG+AGG | + | chr7.3:21542239-21542258 | MS.gene41846:CDS | 50.0% | |
| TGGGCCATTTCCATTCACTC+TGG | - | chr7.3:21541609-21541628 | None:intergenic | 50.0% | |
| TGGTATTAAGGGCTTGTGGG+AGG | + | chr7.3:21540917-21540936 | MS.gene41846:CDS | 50.0% | |
| TGGTGCATCCTAGGGAAGTT+GGG | - | chr7.3:21540295-21540314 | None:intergenic | 50.0% | |
| TGTCATCTGGTGGTAGGTCT+CGG | + | chr7.3:21540625-21540644 | MS.gene41846:CDS | 50.0% | |
| TTTGGAAGGCTCATACACCC+TGG | + | chr7.3:21541995-21542014 | MS.gene41846:CDS | 50.0% | |
| ! | AACAGAGTGCTTGGGCATTC+CGG | - | chr7.3:21541516-21541535 | None:intergenic | 50.0% |
| ! | CAAGCCGCAGAAAAAGGCAT+AGG | - | chr7.3:21540963-21540982 | None:intergenic | 50.0% |
| ! | CAATTGGGTCTGGGACAAAG+AGG | + | chr7.3:21540595-21540614 | MS.gene41846:CDS | 50.0% |
| ! | CCCAATTGATTCCTGGTCTG+GGG | - | chr7.3:21540583-21540602 | None:intergenic | 50.0% |
| ! | GACCCAATTGATTCCTGGTC+TGG | - | chr7.3:21540585-21540604 | None:intergenic | 50.0% |
| ! | TCCCAGACCCAATTGATTCC+TGG | - | chr7.3:21540590-21540609 | None:intergenic | 50.0% |
| !! | CAGTAGAAGGAGCGCTACAA+TGG | + | chr7.3:21542449-21542468 | MS.gene41846:CDS | 50.0% |
| !! | CGTTTCTACGAGACTGGTCT+TGG | + | chr7.3:21540039-21540058 | MS.gene41846:intron | 50.0% |
| AGGAGTCTCCCAACTTCCCT+AGG | + | chr7.3:21540284-21540303 | MS.gene41846:intron | 55.0% | |
| AGGTCCAGTGTGTCATCTGG+TGG | + | chr7.3:21540615-21540634 | MS.gene41846:CDS | 55.0% | |
| ATGGTAGAGGCAGGCCGATT+TGG | + | chr7.3:21542115-21542134 | MS.gene41846:CDS | 55.0% | |
| CCAGTGTGTCATCTGGTGGT+AGG | + | chr7.3:21540619-21540638 | MS.gene41846:CDS | 55.0% | |
| CCCCGAGATTGTCGAAGTTC+AGG | + | chr7.3:21541655-21541674 | MS.gene41846:CDS | 55.0% | |
| CCTACCACCAGATGACACAC+TGG | - | chr7.3:21540622-21540641 | None:intergenic | 55.0% | |
| CTCTCAACTGCTACATCGGC+TGG | + | chr7.3:21542181-21542200 | MS.gene41846:CDS | 55.0% | |
| CTGGTGGTAGGTCTCGGAAT+CGG | + | chr7.3:21540631-21540650 | MS.gene41846:CDS | 55.0% | |
| CTTGGAGGTCTTTGTGGCAC+TGG | + | chr7.3:21541041-21541060 | MS.gene41846:CDS | 55.0% | |
| GACTACGGCATGGAGACATC+AGG | + | chr7.3:21542203-21542222 | MS.gene41846:CDS | 55.0% | |
| GGAAGGCTTGGAGGTCTTTG+TGG | + | chr7.3:21541035-21541054 | MS.gene41846:CDS | 55.0% | |
| GGGAGATATTGGGGCTCTAC+AGG | + | chr7.3:21541454-21541473 | MS.gene41846:CDS | 55.0% | |
| TGGGCCTTCGACAATGACCA+GGG | - | chr7.3:21542015-21542034 | None:intergenic | 55.0% | |
| TGGTAGGTCTCGGAATCGGA+AGG | + | chr7.3:21540635-21540654 | MS.gene41846:CDS | 55.0% | |
| TGTAGGTAGATCCCCAGACC+AGG | + | chr7.3:21540569-21540588 | MS.gene41846:intron | 55.0% | |
| ! | ATTGTGACCACCCTTGGTGC+GGG | + | chr7.3:21542047-21542066 | MS.gene41846:CDS | 55.0% |
| ! | CTGCTACATCGGCTGGACTA+CGG | + | chr7.3:21542188-21542207 | MS.gene41846:CDS | 55.0% |
| ! | TTCCCAAGCTGGTTCCAGCT+GGG | - | chr7.3:21541876-21541895 | None:intergenic | 55.0% |
| !!! | AGGGCTTGTGGGAGGCATTT+TGG | + | chr7.3:21540925-21540944 | MS.gene41846:CDS | 55.0% |
| AGAACAGGAGTCCCGCACCA+AGG | - | chr7.3:21542061-21542080 | None:intergenic | 60.0% | |
| CATTGTCGAAGGCCCAGCTC+TGG | + | chr7.3:21542019-21542038 | MS.gene41846:CDS | 60.0% | |
| CTCCCAGCTGGAACCAGCTT+GGG | + | chr7.3:21541871-21541890 | MS.gene41846:CDS | 60.0% | |
| CTGGGCCTTCGACAATGACC+AGG | - | chr7.3:21542016-21542035 | None:intergenic | 60.0% | |
| GAACAGGAGTCCCGCACCAA+GGG | - | chr7.3:21542060-21542079 | None:intergenic | 60.0% | |
| GCACCCCTTCCCTTCTTTGC+TGG | - | chr7.3:21540215-21540234 | None:intergenic | 60.0% | |
| ! | ACATCGGCTGGACTACGGCA+TGG | + | chr7.3:21542193-21542212 | MS.gene41846:CDS | 60.0% |
| ! | CAAGCTGGTTCCAGCTGGGA+GGG | - | chr7.3:21541872-21541891 | None:intergenic | 60.0% |
| ! | CTTCCCAAGCTGGTTCCAGC+TGG | - | chr7.3:21541877-21541896 | None:intergenic | 60.0% |
| !! | AGAAGGGAAGGGGTGCTGTG+CGG | + | chr7.3:21540219-21540238 | MS.gene41846:intron | 60.0% |
| CCTCCCAGCTGGAACCAGCT+TGG | + | chr7.3:21541870-21541889 | MS.gene41846:CDS | 65.0% | |
| CGGGGGAAACACTACGCTGC+TGG | - | chr7.3:21541640-21541659 | None:intergenic | 65.0% | |
| ! | CCAAGCTGGTTCCAGCTGGG+AGG | - | chr7.3:21541873-21541892 | None:intergenic | 65.0% |
| ! | TGTCGAAGGCCCAGCTCTGG+TGG | + | chr7.3:21542022-21542041 | MS.gene41846:CDS | 65.0% |
| CAGGAGTCCCGCACCAAGGG+TGG | - | chr7.3:21542057-21542076 | None:intergenic | 70.0% | |
| GGGCTCTCATCCCTCCCAGC+TGG | + | chr7.3:21541859-21541878 | MS.gene41846:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 21539744 | 21542666 | 21539744 | ID=MS.gene41846 |
| chr7.3 | mRNA | 21539744 | 21542666 | 21539744 | ID=MS.gene41846.t1;Parent=MS.gene41846 |
| chr7.3 | exon | 21539744 | 21539763 | 21539744 | ID=MS.gene41846.t1.exon1;Parent=MS.gene41846.t1 |
| chr7.3 | CDS | 21539744 | 21539763 | 21539744 | ID=cds.MS.gene41846.t1;Parent=MS.gene41846.t1 |
| chr7.3 | exon | 21540460 | 21540464 | 21540460 | ID=MS.gene41846.t1.exon2;Parent=MS.gene41846.t1 |
| chr7.3 | CDS | 21540460 | 21540464 | 21540460 | ID=cds.MS.gene41846.t1;Parent=MS.gene41846.t1 |
| chr7.3 | exon | 21540574 | 21542666 | 21540574 | ID=MS.gene41846.t1.exon3;Parent=MS.gene41846.t1 |
| chr7.3 | CDS | 21540574 | 21542666 | 21540574 | ID=cds.MS.gene41846.t1;Parent=MS.gene41846.t1 |
| Gene Sequence |
| Protein sequence |
