Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051631.t1 | XP_003589039.2 | 88.2 | 644 | 57 | 3 | 1 | 642 | 1 | 627 | 4.50E-199 | 704.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051631.t1 | Q32PX7 | 34.2 | 184 | 103 | 4 | 108 | 277 | 265 | 444 | 5.4e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051631.t1 | G7IBA6 | 88.2 | 644 | 57 | 3 | 1 | 642 | 1 | 627 | 3.2e-199 | 704.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050361 | MS.gene051631 | -0.809595 | 1.75E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene051631 | -0.816107 | 6.56E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene051631 | -0.814189 | 1.75E-51 | -1.69E-46 |
| MS.gene051631 | MS.gene054379 | -0.800338 | 1.51E-48 | -1.69E-46 |
| MS.gene051631 | MS.gene058147 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene051631 | MS.gene063370 | 0.831715 | 1.43E-55 | -1.69E-46 |
| MS.gene051631 | MS.gene063524 | -0.818119 | 2.31E-52 | -1.69E-46 |
| MS.gene051631 | MS.gene064692 | 0.826415 | 2.75E-54 | -1.69E-46 |
| MS.gene051631 | MS.gene066160 | 0.816342 | 5.81E-52 | -1.69E-46 |
| MS.gene051631 | MS.gene069571 | 0.829449 | 5.11E-55 | -1.69E-46 |
| MS.gene051631 | MS.gene072564 | -0.834407 | 3.05E-56 | -1.69E-46 |
| MS.gene051631 | MS.gene072565 | -0.833888 | 4.12E-56 | -1.69E-46 |
| MS.gene051631 | MS.gene072742 | -0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene051631 | MS.gene08260 | 0.83221 | 1.08E-55 | -1.69E-46 |
| MS.gene051631 | MS.gene08797 | 0.802337 | 5.89E-49 | -1.69E-46 |
| MS.gene051631 | MS.gene09186 | 0.83488 | 2.32E-56 | -1.69E-46 |
| MS.gene051631 | MS.gene09187 | 0.841621 | 4.25E-58 | -1.69E-46 |
| MS.gene051631 | MS.gene21710 | 0.812841 | 3.46E-51 | -1.69E-46 |
| MS.gene051631 | MS.gene21912 | 0.825303 | 5.04E-54 | -1.69E-46 |
| MS.gene051631 | MS.gene22322 | -0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene051631 | MS.gene24541 | 0.98804 | 1.74E-172 | -1.69E-46 |
| MS.gene051631 | MS.gene26246 | 0.813081 | 3.07E-51 | -1.69E-46 |
| MS.gene051631 | MS.gene31685 | -0.824909 | 6.25E-54 | -1.69E-46 |
| MS.gene051631 | MS.gene32973 | 0.98765 | 4.98E-171 | -1.69E-46 |
| MS.gene051631 | MS.gene37434 | 0.840806 | 6.97E-58 | -1.69E-46 |
| MS.gene051631 | MS.gene41846 | -0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene051631 | MS.gene45979 | 0.806172 | 9.36E-50 | -1.69E-46 |
| MS.gene051631 | MS.gene52610 | -0.802072 | 6.67E-49 | -1.69E-46 |
| MS.gene051631 | MS.gene57217 | 0.857385 | 1.69E-62 | -1.69E-46 |
| MS.gene051631 | MS.gene57725 | -0.834564 | 2.79E-56 | -1.69E-46 |
| MS.gene051631 | MS.gene77576 | 0.806157 | 9.43E-50 | -1.69E-46 |
| MS.gene051631 | MS.gene79209 | -0.803636 | 3.17E-49 | -1.69E-46 |
| MS.gene051631 | MS.gene98045 | 0.811816 | 5.79E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02577 | MS.gene051631 | PPI |
| MS.gene051631 | MS.gene73790 | PPI |
| MS.gene73791 | MS.gene051631 | PPI |
| MS.gene051631 | MS.gene46269 | PPI |
| MS.gene46271 | MS.gene051631 | PPI |
| MS.gene013796 | MS.gene051631 | PPI |
| MS.gene051631 | MS.gene03206 | PPI |
| MS.gene051631 | MS.gene013791 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051631.t1 | MTR_1g016760 | 91.975 | 648 | 25 | 4 | 1 | 642 | 1 | 627 | 0.0 | 1052 |
| MS.gene051631.t1 | MTR_3g104280 | 64.062 | 640 | 149 | 17 | 1 | 612 | 1 | 587 | 0.0 | 652 |
| MS.gene051631.t1 | MTR_3g104270 | 62.593 | 671 | 156 | 19 | 1 | 642 | 1 | 605 | 0.0 | 628 |
| MS.gene051631.t1 | MTR_5g008420 | 38.966 | 580 | 216 | 32 | 112 | 610 | 185 | 707 | 3.73e-66 | 232 |
| MS.gene051631.t1 | MTR_1g090773 | 28.641 | 206 | 122 | 6 | 115 | 307 | 39 | 232 | 1.23e-12 | 70.1 |
| MS.gene051631.t1 | MTR_7g010340 | 28.750 | 480 | 231 | 26 | 112 | 549 | 123 | 533 | 1.05e-11 | 68.2 |
| MS.gene051631.t1 | MTR_7g010340 | 28.750 | 480 | 231 | 26 | 112 | 549 | 107 | 517 | 1.24e-11 | 68.2 |
| MS.gene051631.t1 | MTR_4g093650 | 29.747 | 158 | 87 | 5 | 122 | 267 | 30 | 175 | 7.65e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051631.t1 | AT2G25970 | 52.782 | 665 | 195 | 33 | 1 | 611 | 1 | 600 | 1.29e-142 | 429 |
| MS.gene051631.t1 | AT4G10070 | 44.882 | 254 | 125 | 7 | 110 | 353 | 174 | 422 | 3.15e-54 | 197 |
| MS.gene051631.t1 | AT1G33680 | 36.464 | 543 | 266 | 25 | 110 | 618 | 230 | 727 | 4.78e-52 | 192 |
| MS.gene051631.t1 | AT5G04430 | 27.653 | 311 | 158 | 12 | 69 | 366 | 9 | 265 | 8.48e-16 | 79.7 |
| MS.gene051631.t1 | AT5G04430 | 29.817 | 218 | 115 | 8 | 69 | 279 | 9 | 195 | 6.61e-14 | 73.6 |
Find 258 sgRNAs with CRISPR-Local
Find 508 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAGGCCCACCTTGTTATT+TGG | 0.118001 | 1.3:+5700426 | None:intergenic |
| GTTCGTCGTACTTGCGTTTC+AGG | 0.131446 | 1.3:+5702170 | None:intergenic |
| ACTAATCTATTTGGAGAATT+AGG | 0.181216 | 1.3:+5701117 | None:intergenic |
| GGAAGGGTTGGTGTTATTAT+TGG | 0.182914 | 1.3:-5701219 | MS.gene051631:CDS |
| GTAAGCTCAACTAATCTATT+TGG | 0.259507 | 1.3:+5701108 | None:intergenic |
| AGGAGGACCGTTGTCGAATT+TGG | 0.260354 | 1.3:+5701973 | None:intergenic |
| CTTTCAGTGGATGTGTCGCC+TGG | 0.292557 | 1.3:+5699992 | None:intergenic |
| CTTGTTATTTGGAATCTTCA+TGG | 0.296247 | 1.3:+5700437 | None:intergenic |
| GCTCTTTGAGAGCCTGCTTC+TGG | 0.301980 | 1.3:+5696042 | None:intergenic |
| AATAGATTAGTTGAGCTTAC+TGG | 0.304836 | 1.3:-5701105 | MS.gene051631:CDS |
| TACAACTGGAGCAAGAATTC+AGG | 0.310281 | 1.3:-5700258 | MS.gene051631:intron |
| AAATCAGCGGTGGCGGGAGG+GGG | 0.314498 | 1.3:+5702079 | None:intergenic |
| CCTAATGCTGCTGGAGGTTA+TGG | 0.319168 | 1.3:-5696114 | MS.gene051631:CDS |
| GGTGGATAGTTGGCAGCATT+TGG | 0.321788 | 1.3:+5696282 | None:intergenic |
| AATCCAAGTTACCCGTGATA+TGG | 0.322309 | 1.3:-5701148 | MS.gene051631:CDS |
| ATCCATAGTTGGTGGTAGTT+TGG | 0.325878 | 1.3:+5696379 | None:intergenic |
| GAAATCAGCGGTGGCGGGAG+GGG | 0.335247 | 1.3:+5702078 | None:intergenic |
| GCCTGCTGAGCTCCCTGTGC+AGG | 0.353119 | 1.3:+5695835 | None:intergenic |
| AAGCTCGGCCACCCTCTAGC+TGG | 0.354172 | 1.3:-5696827 | MS.gene051631:CDS |
| GGCCAAACTACCACCAACTA+TGG | 0.354270 | 1.3:-5696381 | MS.gene051631:CDS |
| TTGAGAGCCTGCTTCTGGTT+GGG | 0.355943 | 1.3:+5696047 | None:intergenic |
| ATAACACCAACCCTTCCATT+AGG | 0.362493 | 1.3:+5701225 | None:intergenic |
| CATCCATATCACGGGTAACT+TGG | 0.363155 | 1.3:+5701145 | None:intergenic |
| TCTTGAGCTGACCCATAGCT+TGG | 0.369291 | 1.3:+5696405 | None:intergenic |
| TCTCAAAGAGCACCACCTTC+TGG | 0.375855 | 1.3:-5696030 | MS.gene051631:CDS |
| CCTCAAACACAGTCTGGTTA+TGG | 0.378826 | 1.3:-5696195 | MS.gene051631:CDS |
| TAACACCAACCCTTCCATTA+GGG | 0.380545 | 1.3:+5701226 | None:intergenic |
| CTTGCTGAGGCACATTGTAC+TGG | 0.386367 | 1.3:+5696733 | None:intergenic |
| CTGGTGGATATTCTACCAAT+TGG | 0.388293 | 1.3:-5696683 | MS.gene051631:CDS |
| GTCCCATCAGCTGGAGGTGC+AGG | 0.392215 | 1.3:+5696579 | None:intergenic |
| CAGCATTTGGGCTAGGCTGT+TGG | 0.392417 | 1.3:+5696295 | None:intergenic |
| TATGATCAGCAGCAAATCTA+TGG | 0.393101 | 1.3:-5696435 | MS.gene051631:CDS |
| CTTGAGCTGACCCATAGCTT+GGG | 0.393959 | 1.3:+5696406 | None:intergenic |
| GGGGCTGCTCAGCCAAGTTA+TGG | 0.394510 | 1.3:-5696255 | MS.gene051631:CDS |
| ATCCGCTGGTTATAACCAAC+CGG | 0.399371 | 1.3:-5696532 | MS.gene051631:CDS |
| GCTTCTCAACAACCTGGTTA+TGG | 0.399715 | 1.3:-5696792 | MS.gene051631:CDS |
| CCATATGCTGCTTGGGAGGT+TGG | 0.401024 | 1.3:+5696225 | None:intergenic |
| AATTGAATCTGCAAAACAAT+TGG | 0.402759 | 1.3:-5699939 | MS.gene051631:CDS |
| CCATAACCTCCAGCAGCATT+AGG | 0.408998 | 1.3:+5696114 | None:intergenic |
| AGAGCACCACCTTCTGGTTA+TGG | 0.409292 | 1.3:-5696024 | MS.gene051631:CDS |
| ACCTGCACAGGGAGCTCAGC+AGG | 0.412517 | 1.3:-5695836 | MS.gene051631:CDS |
| ACCACCAACTATGGATCAAA+AGG | 0.413986 | 1.3:-5696372 | MS.gene051631:CDS |
| CAGGCTGAGTCTGGAGGTAA+TGG | 0.416113 | 1.3:-5700507 | MS.gene051631:CDS |
| TTGGCTGCCATATGCTGCTT+GGG | 0.417515 | 1.3:+5696218 | None:intergenic |
| AAGAGTATGCAAGCTACAAC+TGG | 0.418295 | 1.3:-5700272 | MS.gene051631:CDS |
| GCTGGGCAGTTGCAGTGGAC+TGG | 0.419977 | 1.3:+5696658 | None:intergenic |
| CCAACCTCCCAAGCAGCATA+TGG | 0.421508 | 1.3:-5696225 | MS.gene051631:CDS |
| TATCAACAACCACCACAATC+AGG | 0.423047 | 1.3:-5696477 | MS.gene051631:CDS |
| AGGAGGTCCGTCGGAGAAAC+CGG | 0.425705 | 1.3:+5702123 | None:intergenic |
| GTTGGTGTTATTATTGGAAA+AGG | 0.426073 | 1.3:-5701213 | MS.gene051631:CDS |
| GGGCTGCTCAGCCAAGTTAT+GGG | 0.426222 | 1.3:-5696254 | MS.gene051631:CDS |
| AATCAGCGGTGGCGGGAGGG+GGG | 0.427004 | 1.3:+5702080 | None:intergenic |
| GGTCCTGCACCTCCAGCTGA+TGG | 0.427874 | 1.3:-5696582 | MS.gene051631:CDS |
| GTCGCCGCTCGTCTCCTCTC+TGG | 0.429663 | 1.3:-5702028 | MS.gene051631:CDS |
| GAGTTCGAAATCAGCGGTGG+CGG | 0.429907 | 1.3:+5702072 | None:intergenic |
| GGTTATGGTCCTCCATCATA+TGG | 0.431553 | 1.3:-5696009 | MS.gene051631:CDS |
| CTTGTTACTCGACGAATGAC+TGG | 0.434663 | 1.3:-5700483 | MS.gene051631:CDS |
| AAGGTTGGACAGGTGGAACT+TGG | 0.436476 | 1.3:+5696340 | None:intergenic |
| GTGGATAGTTGGCAGCATTT+GGG | 0.441115 | 1.3:+5696283 | None:intergenic |
| GCAGGCGGTCAACCTGGTTA+TGG | 0.441342 | 1.3:-5695964 | MS.gene051631:CDS |
| GAGTAACCACCGGACATTGA+TGG | 0.441729 | 1.3:+5696864 | None:intergenic |
| TTCGTCGTACTTGCGTTTCA+GGG | 0.443304 | 1.3:+5702171 | None:intergenic |
| AGCTAGAGGGTGGCCGAGCT+TGG | 0.443328 | 1.3:+5696829 | None:intergenic |
| AGCTCGGCCACCCTCTAGCT+GGG | 0.447088 | 1.3:-5696826 | MS.gene051631:CDS |
| CCATAACCAGACTGTGTTTG+AGG | 0.447473 | 1.3:+5696195 | None:intergenic |
| CTACAGGTTGGTCTTATAAT+CGG | 0.447978 | 1.3:-5700314 | MS.gene051631:intron |
| CCGTCATATGGTGCTCCTGC+AGG | 0.448573 | 1.3:-5695982 | MS.gene051631:CDS |
| GGTGTTATTATTGGAAAAGG+TGG | 0.450115 | 1.3:-5701210 | MS.gene051631:CDS |
| AAGAAGATTGAAATCCCTAA+TGG | 0.454062 | 1.3:-5701240 | MS.gene051631:CDS |
| GTTGGCTGCCATATGCTGCT+TGG | 0.454556 | 1.3:+5696217 | None:intergenic |
| CTCCCTCTGATGTCGTCAAA+CGG | 0.458508 | 1.3:-5701997 | MS.gene051631:CDS |
| TCGTACTTGCGTTTCAGGGA+AGG | 0.461758 | 1.3:+5702175 | None:intergenic |
| TTTGAGAGCCTGCTTCTGGT+TGG | 0.462877 | 1.3:+5696046 | None:intergenic |
| TCATATGGTCCTCCGTCATA+TGG | 0.465714 | 1.3:-5695994 | MS.gene051631:CDS |
| AAGTATCTTCAGTTGCAATC+TGG | 0.466830 | 1.3:-5701177 | MS.gene051631:CDS |
| CAACCTTCACAACAAGGTTA+TGG | 0.467298 | 1.3:-5696324 | MS.gene051631:CDS |
| CTCAGCAAGGTTACCAAGCT+CGG | 0.468815 | 1.3:-5696842 | MS.gene051631:CDS |
| CCTTCCCCTTACGATTCATC+AGG | 0.470277 | 1.3:-5701953 | MS.gene051631:intron |
| CGAAATCAGCGGTGGCGGGA+GGG | 0.470982 | 1.3:+5702077 | None:intergenic |
| GGTTATCCTCCCCACTCAGC+TGG | 0.471437 | 1.3:-5696702 | MS.gene051631:CDS |
| GTCCTGCACCTCCAGCTGAT+GGG | 0.471850 | 1.3:-5696581 | MS.gene051631:CDS |
| CAGGCACCACATGGTTCCTA+TGG | 0.475333 | 1.3:-5695940 | MS.gene051631:CDS |
| TAGTTGGCAGCATTTGGGCT+AGG | 0.476978 | 1.3:+5696288 | None:intergenic |
| AGCCCCTTGTGGTGGATAGT+TGG | 0.478569 | 1.3:+5696272 | None:intergenic |
| GCTCCTGCAGGCGGTCAACC+TGG | 0.480776 | 1.3:-5695970 | MS.gene051631:CDS |
| GCTGGAGGTTATGGTCAACC+TGG | 0.480952 | 1.3:-5696105 | MS.gene051631:CDS |
| CCACATGGTTCCTATGGTGC+TGG | 0.481020 | 1.3:-5695934 | MS.gene051631:CDS |
| CATAACCTTGTTGTGAAGGT+TGG | 0.482142 | 1.3:+5696325 | None:intergenic |
| TGCAGTGGACTGGTCCCAAT+TGG | 0.482391 | 1.3:+5696668 | None:intergenic |
| TATGGCTCAGCCCCAAGCTA+TGG | 0.483146 | 1.3:-5696417 | MS.gene051631:CDS |
| GCCCGTGGTGGTAGCTATGA+TGG | 0.484526 | 1.3:-5695862 | MS.gene051631:CDS |
| TGGTTATAACCAACCGGGGC+AGG | 0.484946 | 1.3:-5696526 | MS.gene051631:CDS |
| TATTGCGATTCGTCAGCCAT+TGG | 0.486803 | 1.3:+5702211 | None:intergenic |
| TTTCAGTGGATGTGTCGCCT+GGG | 0.488134 | 1.3:+5699993 | None:intergenic |
| TGCTGCTGATCATATGATGT+TGG | 0.488312 | 1.3:+5696444 | None:intergenic |
| AGAATATCCACCAGCTGAGT+GGG | 0.492850 | 1.3:+5696692 | None:intergenic |
| CTATGATGGAGCACCTGCAC+AGG | 0.493101 | 1.3:-5695848 | MS.gene051631:CDS |
| CTATGGTGCTGGTTATCCTC+AGG | 0.495560 | 1.3:-5695923 | MS.gene051631:CDS |
| TGGTGGATATTCTACCAATT+GGG | 0.499810 | 1.3:-5696682 | MS.gene051631:CDS |
| TCGAAATCAGCGGTGGCGGG+AGG | 0.502438 | 1.3:+5702076 | None:intergenic |
| TACCATCAGCAGAATATGCT+GGG | 0.503201 | 1.3:+5695899 | None:intergenic |
| CCACCAACTATGGATCAAAA+GGG | 0.503822 | 1.3:-5696371 | MS.gene051631:CDS |
| CCTCAGCAACAGCAGAATCC+TGG | 0.504044 | 1.3:-5696606 | MS.gene051631:CDS |
| AATAATCATAGGTAGACTGC+TGG | 0.504119 | 1.3:+5696640 | None:intergenic |
| GGCACATTGTACTGGGAAGT+TGG | 0.504619 | 1.3:+5696741 | None:intergenic |
| CGGTCAACCTGGTTATGGTC+AGG | 0.506940 | 1.3:-5695959 | MS.gene051631:CDS |
| CTGTTGATTATAATAATCAT+AGG | 0.509838 | 1.3:+5696629 | None:intergenic |
| TTGTACTGGGAAGTTGGACC+AGG | 0.509939 | 1.3:+5696747 | None:intergenic |
| AGCCAACCTCAAACACAGTC+TGG | 0.515940 | 1.3:-5696201 | MS.gene051631:CDS |
| TAGAATATCCACCAGCTGAG+TGG | 0.517553 | 1.3:+5696691 | None:intergenic |
| TCACAGTCACCTAATGCTGC+TGG | 0.518137 | 1.3:-5696123 | MS.gene051631:CDS |
| AGTTCGAAATCAGCGGTGGC+GGG | 0.519442 | 1.3:+5702073 | None:intergenic |
| ACCGGGGCAGGTATATTCTC+AGG | 0.519963 | 1.3:-5696514 | MS.gene051631:CDS |
| GACTGTGATTGTCCGTATGC+AGG | 0.520554 | 1.3:+5696138 | None:intergenic |
| CCAGGATTCTGCTGTTGCTG+AGG | 0.520990 | 1.3:+5696606 | None:intergenic |
| TTGTAAGCAGTCCCATCAGC+TGG | 0.522053 | 1.3:+5696570 | None:intergenic |
| TTCAGTGGATGTGTCGCCTG+GGG | 0.528218 | 1.3:+5699994 | None:intergenic |
| TGCAGATTCAATTTGTTCAG+AGG | 0.529509 | 1.3:+5699949 | None:intergenic |
| TCCTGAGAATATACCTGCCC+CGG | 0.531982 | 1.3:+5696513 | None:intergenic |
| CCTCCTCACTCACGAACCAC+CGG | 0.532065 | 1.3:-5702142 | MS.gene051631:CDS |
| GTTGGACCAGGGTATGCTCC+AGG | 0.533306 | 1.3:+5696759 | None:intergenic |
| ATGGCTCAGCCCCAAGCTAT+GGG | 0.534329 | 1.3:-5696416 | MS.gene051631:CDS |
| CCAGGTTGTTGAGAAGCGGC+AGG | 0.535004 | 1.3:+5696798 | None:intergenic |
| GAATACGAAGGTATACTCAT+AGG | 0.536049 | 1.3:+5701279 | None:intergenic |
| GGATATTCCCAACCAGAAGC+AGG | 0.537520 | 1.3:-5696054 | MS.gene051631:CDS |
| AGTGGTACTCCGCCTGCATA+CGG | 0.538474 | 1.3:-5696150 | MS.gene051631:CDS |
| TTACCATCAGCAGAATATGC+TGG | 0.541168 | 1.3:+5695898 | None:intergenic |
| CTTAGAAATCCATCAATGTC+CGG | 0.541667 | 1.3:-5696873 | MS.gene051631:CDS |
| GGCTGAGCAGCCCCTTGTGG+TGG | 0.542062 | 1.3:+5696264 | None:intergenic |
| GGCTGGGAAGGAGGATACCC+AGG | 0.542313 | 1.3:+5696087 | None:intergenic |
| GGTTATGGCTATGCACAGCC+TGG | 0.542437 | 1.3:-5696777 | MS.gene051631:CDS |
| ATACCTTCGTATTCGCATCA+AGG | 0.542939 | 1.3:-5701270 | MS.gene051631:CDS |
| TAACCAGGTTGACCGCCTGC+AGG | 0.543015 | 1.3:+5695967 | None:intergenic |
| GCTGGAGGTGCAGGACCACC+AGG | 0.543305 | 1.3:+5696588 | None:intergenic |
| GTGCCTCAGCAAGCTTATGC+AGG | 0.543329 | 1.3:-5696723 | MS.gene051631:CDS |
| AAGCTATGGGTCAGCTCAAG+AGG | 0.543556 | 1.3:-5696403 | MS.gene051631:CDS |
| GTTGGTCTTATAATCGGTAA+AGG | 0.545344 | 1.3:-5700308 | MS.gene051631:CDS |
| TATGCTGCTTGGGAGGTTGG+CGG | 0.549360 | 1.3:+5696228 | None:intergenic |
| AGGTTGTTGAGAAGCGGCAG+GGG | 0.550505 | 1.3:+5696800 | None:intergenic |
| CCTTGTTGTGAAGGTTGGAC+AGG | 0.552316 | 1.3:+5696330 | None:intergenic |
| TTGCTGAGGCACATTGTACT+GGG | 0.553886 | 1.3:+5696734 | None:intergenic |
| TACTCGACGAATGACTGGAC+AGG | 0.554297 | 1.3:-5700478 | MS.gene051631:CDS |
| AGACTGCTGGGCAGTTGCAG+TGG | 0.556554 | 1.3:+5696653 | None:intergenic |
| CATGAAGATTCCAAATAACA+AGG | 0.558461 | 1.3:-5700436 | MS.gene051631:intron |
| GTATATTCTCAGGATGGCTA+TGG | 0.559901 | 1.3:-5696504 | MS.gene051631:CDS |
| CTACCATAACCTTGTTGTGA+AGG | 0.561165 | 1.3:+5696321 | None:intergenic |
| CTGAGGATAACCAGCACCAT+AGG | 0.562921 | 1.3:+5695924 | None:intergenic |
| TAGGATCAGCATCCATATCA+CGG | 0.563712 | 1.3:+5701136 | None:intergenic |
| GAAATCCCTAATGGAAGGGT+TGG | 0.564633 | 1.3:-5701231 | MS.gene051631:CDS |
| CACTGACCTGATGAATCGTA+AGG | 0.565644 | 1.3:+5701947 | None:intergenic |
| AAACCGGTGGTTCGTGAGTG+AGG | 0.566199 | 1.3:+5702139 | None:intergenic |
| GGGACGTTGTTGTAAGAAGG+AGG | 0.568413 | 1.3:+5702100 | None:intergenic |
| CAGGTTGTTGAGAAGCGGCA+GGG | 0.569198 | 1.3:+5696799 | None:intergenic |
| GCCCCAGCATATTCTGCTGA+TGG | 0.569348 | 1.3:-5695901 | MS.gene051631:CDS |
| TACAATCAACCACCATCCGC+TGG | 0.570184 | 1.3:-5696546 | MS.gene051631:CDS |
| AGAAGGAGGAGGAGGTCCGT+CGG | 0.571000 | 1.3:+5702114 | None:intergenic |
| GTGGTTCGTGAGTGAGGAGG+TGG | 0.571087 | 1.3:+5702145 | None:intergenic |
| GTCCGTTTGACGACATCAGA+GGG | 0.572785 | 1.3:+5701995 | None:intergenic |
| GGCTGTGCATAGCCATAACC+AGG | 0.572820 | 1.3:+5696780 | None:intergenic |
| CCCCGGTTGGTTATAACCAG+CGG | 0.574388 | 1.3:+5696530 | None:intergenic |
| GTTGGCGGTACCCCATAACT+TGG | 0.574628 | 1.3:+5696243 | None:intergenic |
| CGAACCACCGGTTTCTCCGA+CGG | 0.574726 | 1.3:-5702130 | MS.gene051631:CDS |
| TATCCTCCCCACTCAGCTGG+TGG | 0.575900 | 1.3:-5696699 | MS.gene051631:CDS |
| TCCATCATAGCTACCACCAC+GGG | 0.578817 | 1.3:+5695861 | None:intergenic |
| TGGTTATAACCAGCGGATGG+TGG | 0.581931 | 1.3:+5696537 | None:intergenic |
| GCAGAATATGCTGGGGCCTG+AGG | 0.582180 | 1.3:+5695907 | None:intergenic |
| TCCGCTGGTTATAACCAACC+GGG | 0.583200 | 1.3:-5696531 | MS.gene051631:CDS |
| TACCTTCGTATTCGCATCAA+GGG | 0.584599 | 1.3:-5701269 | MS.gene051631:CDS |
| TACTTGCGTTTCAGGGAAGG+TGG | 0.584666 | 1.3:+5702178 | None:intergenic |
| TTGAGCTGACCCATAGCTTG+GGG | 0.586253 | 1.3:+5696407 | None:intergenic |
| CCTGTCCAACCTTCACAACA+AGG | 0.586296 | 1.3:-5696330 | MS.gene051631:CDS |
| AGGTTGGACAGGTGGAACTT+GGG | 0.587507 | 1.3:+5696341 | None:intergenic |
| GCTGCCATATGCTGCTTGGG+AGG | 0.588178 | 1.3:+5696221 | None:intergenic |
| AGGATCAGCATCCATATCAC+GGG | 0.589305 | 1.3:+5701137 | None:intergenic |
| AGATTGAAATCCCTAATGGA+AGG | 0.590386 | 1.3:-5701236 | MS.gene051631:CDS |
| CTTGGCTGAGCAGCCCCTTG+TGG | 0.595602 | 1.3:+5696261 | None:intergenic |
| GGCTGAGCATACCCTGATTG+TGG | 0.596057 | 1.3:+5696465 | None:intergenic |
| TGGGAATATCCAGAAGGAGG+GGG | 0.597039 | 1.3:+5696066 | None:intergenic |
| TATGACGGAGGACCATATGA+TGG | 0.597938 | 1.3:+5695997 | None:intergenic |
| GAGAATATACCTGCCCCGGT+TGG | 0.599934 | 1.3:+5696517 | None:intergenic |
| TATGCAGGCGGAGTACCACT+TGG | 0.600643 | 1.3:+5696153 | None:intergenic |
| CCTGCAGGAGCACCATATGA+CGG | 0.602443 | 1.3:+5695982 | None:intergenic |
| TTGTTGTAAGAAGGAGGAGG+AGG | 0.606553 | 1.3:+5702106 | None:intergenic |
| AACCAGACTGTGTTTGAGGT+TGG | 0.607137 | 1.3:+5696199 | None:intergenic |
| CCTGATGAATCGTAAGGGGA+AGG | 0.609958 | 1.3:+5701953 | None:intergenic |
| GGTCCGTTTGACGACATCAG+AGG | 0.610197 | 1.3:+5701994 | None:intergenic |
| ATCAACAACCACCACAATCA+GGG | 0.610790 | 1.3:-5696476 | MS.gene051631:CDS |
| ATAATCATAGGTAGACTGCT+GGG | 0.611439 | 1.3:+5696641 | None:intergenic |
| GATTGAAATCCCTAATGGAA+GGG | 0.612326 | 1.3:-5701235 | MS.gene051631:CDS |
| CTGGAGGTTATGGTCAACCT+GGG | 0.614290 | 1.3:-5696104 | MS.gene051631:CDS |
| CCTGCCGCTTCTCAACAACC+TGG | 0.615048 | 1.3:-5696798 | MS.gene051631:CDS |
| GTTGGGAATATCCAGAAGGA+GGG | 0.618770 | 1.3:+5696064 | None:intergenic |
| TTTAATGAGTTCGAAATCAG+CGG | 0.620214 | 1.3:+5702066 | None:intergenic |
| AGGGAGCAGCGGCACCAGAG+AGG | 0.621571 | 1.3:+5702014 | None:intergenic |
| TCATATGGTGCTCCTGCAGG+CGG | 0.623705 | 1.3:-5695979 | MS.gene051631:CDS |
| TATGATGGAGCACCTGCACA+GGG | 0.625096 | 1.3:-5695847 | MS.gene051631:CDS |
| TGTTGTGAAGGTTGGACAGG+TGG | 0.625828 | 1.3:+5696333 | None:intergenic |
| TGCCAACTATCCACCACAAG+GGG | 0.627557 | 1.3:-5696274 | MS.gene051631:CDS |
| GGCTGCTCAGCCAAGTTATG+GGG | 0.628058 | 1.3:-5696253 | MS.gene051631:CDS |
| ACGTTGTTGTAAGAAGGAGG+AGG | 0.630187 | 1.3:+5702103 | None:intergenic |
| ACTGACCTGATGAATCGTAA+GGG | 0.631319 | 1.3:+5701948 | None:intergenic |
| ATAACCAGGTTGTTGAGAAG+CGG | 0.633923 | 1.3:+5696794 | None:intergenic |
| GCACAGCCTGGAGCATACCC+TGG | 0.637236 | 1.3:-5696765 | MS.gene051631:CDS |
| TCTGCTGATGGTAATGCAAG+TGG | 0.639056 | 1.3:-5695889 | MS.gene051631:CDS |
| CATCAATGAAGTTCTTGCTG+AGG | 0.639266 | 1.3:-5701049 | MS.gene051631:intron |
| GGTTGTTGAGAAGCGGCAGG+GGG | 0.640268 | 1.3:+5696801 | None:intergenic |
| GATGAATCGTAAGGGGAAGG+AGG | 0.641309 | 1.3:+5701956 | None:intergenic |
| CACCAACTATGGATCAAAAG+GGG | 0.641638 | 1.3:-5696370 | MS.gene051631:CDS |
| GGTCTTATAATCGGTAAAGG+TGG | 0.641992 | 1.3:-5700305 | MS.gene051631:CDS |
| GACGACATCAGAGGGAGCAG+CGG | 0.642009 | 1.3:+5702003 | None:intergenic |
| GGTTGGGAATATCCAGAAGG+AGG | 0.643058 | 1.3:+5696063 | None:intergenic |
| TCCGGTGGTTACTCTCAGCA+AGG | 0.644168 | 1.3:-5696855 | MS.gene051631:CDS |
| CTGACCTGATGAATCGTAAG+GGG | 0.646597 | 1.3:+5701949 | None:intergenic |
| GGTTATGGTCAGGCACCACA+TGG | 0.648967 | 1.3:-5695949 | MS.gene051631:CDS |
| AGCTATGGGTCAGCTCAAGA+GGG | 0.656317 | 1.3:-5696402 | MS.gene051631:CDS |
| AGGTCCGTCGGAGAAACCGG+TGG | 0.656677 | 1.3:+5702126 | None:intergenic |
| TATCCACCAGCTGAGTGGGG+AGG | 0.656693 | 1.3:+5696696 | None:intergenic |
| GGCACCAGAGAGGAGACGAG+CGG | 0.659053 | 1.3:+5702024 | None:intergenic |
| GGTTGGTTATAACCAGCGGA+TGG | 0.660203 | 1.3:+5696534 | None:intergenic |
| TGATTCAATCCTCAGTGGCG+AGG | 0.661659 | 1.3:-5699915 | MS.gene051631:intron |
| TCAGTGGATGTGTCGCCTGG+GGG | 0.664235 | 1.3:+5699995 | None:intergenic |
| AATGAGTTCGAAATCAGCGG+TGG | 0.667671 | 1.3:+5702069 | None:intergenic |
| TAACCTGCATAAGCTTGCTG+AGG | 0.668745 | 1.3:+5696720 | None:intergenic |
| TGAGCATACCCTGATTGTGG+TGG | 0.669029 | 1.3:+5696468 | None:intergenic |
| GATGGAGGACCATAACCAGA+AGG | 0.670007 | 1.3:+5696015 | None:intergenic |
| TAAGCAGTCCCATCAGCTGG+AGG | 0.671420 | 1.3:+5696573 | None:intergenic |
| ACCTTGCTGAGAGTAACCAC+CGG | 0.672988 | 1.3:+5696854 | None:intergenic |
| GGGCAGGTATATTCTCAGGA+TGG | 0.673213 | 1.3:-5696510 | MS.gene051631:CDS |
| CTGCCAACTATCCACCACAA+GGG | 0.674671 | 1.3:-5696275 | MS.gene051631:CDS |
| CTCCATCATAGCTACCACCA+CGG | 0.675902 | 1.3:+5695860 | None:intergenic |
| GACCCTTGATGCGAATACGA+AGG | 0.677168 | 1.3:+5701267 | None:intergenic |
| GACGGAGGACCATATGATGG+AGG | 0.678171 | 1.3:+5696000 | None:intergenic |
| GAATATCCACCAGCTGAGTG+GGG | 0.679261 | 1.3:+5696693 | None:intergenic |
| TCTGGTTGGGAATATCCAGA+AGG | 0.680022 | 1.3:+5696060 | None:intergenic |
| CTGCTGATGGTAATGCAAGT+GGG | 0.680991 | 1.3:-5695888 | MS.gene051631:CDS |
| ACTCGACGAATGACTGGACA+GGG | 0.681409 | 1.3:-5700477 | MS.gene051631:CDS |
| AGAAATCCATCAATGTCCGG+TGG | 0.682404 | 1.3:-5696870 | MS.gene051631:CDS |
| TTGGGAATATCCAGAAGGAG+GGG | 0.684340 | 1.3:+5696065 | None:intergenic |
| TGTGATTGTCCGTATGCAGG+CGG | 0.684703 | 1.3:+5696141 | None:intergenic |
| CAGTCACCTAATGCTGCTGG+AGG | 0.687355 | 1.3:-5696120 | MS.gene051631:CDS |
| GGAGGACCATAACCAGAAGG+TGG | 0.687831 | 1.3:+5696018 | None:intergenic |
| TGTGGTGCCTGACCATAACC+AGG | 0.688833 | 1.3:+5695952 | None:intergenic |
| GCTGCCAACTATCCACCACA+AGG | 0.689795 | 1.3:-5696276 | MS.gene051631:CDS |
| TTGGTTGATTCAATCCTCAG+TGG | 0.689871 | 1.3:-5699920 | MS.gene051631:CDS |
| CCTCAAACTCAAAAGCCAAG+TGG | 0.690391 | 1.3:-5696168 | MS.gene051631:CDS |
| ACCATCAGCAGAATATGCTG+GGG | 0.694973 | 1.3:+5695900 | None:intergenic |
| CCGCTGGTTATAACCAACCG+GGG | 0.703478 | 1.3:-5696530 | MS.gene051631:CDS |
| CAGCAACAGCAGAATCCTGG+TGG | 0.703625 | 1.3:-5696603 | MS.gene051631:CDS |
| ATATTAGTACATCAGCTCTG+AGG | 0.707129 | 1.3:+5695796 | None:intergenic |
| CCGGTGGTTCGTGAGTGAGG+AGG | 0.707715 | 1.3:+5702142 | None:intergenic |
| AAACGGACCAAATTCGACAA+CGG | 0.710424 | 1.3:-5701980 | MS.gene051631:CDS |
| AATGCAAGTGGGAATGCCCG+TGG | 0.712985 | 1.3:-5695877 | MS.gene051631:CDS |
| TGTACTGGGAAGTTGGACCA+GGG | 0.721480 | 1.3:+5696748 | None:intergenic |
| CGACGAATGACTGGACAGGG+TGG | 0.727236 | 1.3:-5700474 | MS.gene051631:CDS |
| GCAGGAGCACCATATGACGG+AGG | 0.739248 | 1.3:+5695985 | None:intergenic |
| CAAAACATACCTCGCCACTG+AGG | 0.741645 | 1.3:+5699906 | None:intergenic |
| GCAAGTGGGAATGCCCGTGG+TGG | 0.753231 | 1.3:-5695874 | MS.gene051631:CDS |
| CCAGCACCATAGGAACCATG+TGG | 0.763459 | 1.3:+5695934 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTTAATCTTATTATT+TGG | - | chr1.3:5696650-5696669 | MS.gene051631:CDS | 10.0% |
| !! | ATATAAATAACACAATATTA+AGG | + | chr1.3:5700993-5701012 | None:intergenic | 10.0% |
| !! | TATAAATAACACAATATTAA+GGG | + | chr1.3:5700992-5701011 | None:intergenic | 10.0% |
| !! | AAAGAACATTAAAAATTGAA+GGG | - | chr1.3:5698042-5698061 | MS.gene051631:intron | 15.0% |
| !! | ACCTAAAATTAAGTAAAATT+AGG | + | chr1.3:5696124-5696143 | None:intergenic | 15.0% |
| !! | ACTTAATAATAATATATGGA+AGG | + | chr1.3:5699595-5699614 | None:intergenic | 15.0% |
| !! | AGGAACTTAATAATAATATA+TGG | + | chr1.3:5699599-5699618 | None:intergenic | 15.0% |
| !! | ATTTATGTAAATGTGATTTA+GGG | - | chr1.3:5698774-5698793 | MS.gene051631:intron | 15.0% |
| !! | CTTAATAATAATATATGGAA+GGG | + | chr1.3:5699594-5699613 | None:intergenic | 15.0% |
| !! | TAATCATTATTTATGTTAGA+TGG | - | chr1.3:5698257-5698276 | MS.gene051631:intron | 15.0% |
| !! | TTATTATTGAAACAATTGTA+CGG | - | chr1.3:5699288-5699307 | MS.gene051631:intron | 15.0% |
| !! | TTGTATGTGAATATTTAATT+TGG | - | chr1.3:5697242-5697261 | MS.gene051631:intron | 15.0% |
| !!! | AAGATAATTTTGATAAACTT+AGG | + | chr1.3:5698920-5698939 | None:intergenic | 15.0% |
| !!! | AATTTCGATTATTTGATAAT+TGG | - | chr1.3:5696682-5696701 | MS.gene051631:CDS | 15.0% |
| !!! | AGAAAATTTAAAATCTCTTA+GGG | - | chr1.3:5697057-5697076 | MS.gene051631:intron | 15.0% |
| !!! | GTATCATAGTTATATTATTT+TGG | - | chr1.3:5698888-5698907 | MS.gene051631:intron | 15.0% |
| !!! | TAGAAAATTTAAAATCTCTT+AGG | - | chr1.3:5697056-5697075 | MS.gene051631:intron | 15.0% |
| !!! | TCCTAATTTTACTTAATTTT+AGG | - | chr1.3:5696120-5696139 | MS.gene051631:CDS | 15.0% |
| !! | AAAGAGTCTATAGATAAAAT+AGG | + | chr1.3:5696995-5697014 | None:intergenic | 20.0% |
| !! | AAGAGTCTATAGATAAAATA+GGG | + | chr1.3:5696994-5697013 | None:intergenic | 20.0% |
| !! | ACAATTCTATTGCAAAATAT+GGG | + | chr1.3:5700741-5700760 | None:intergenic | 20.0% |
| !! | AGTTCATTTGTATTTATTTG+TGG | - | chr1.3:5701093-5701112 | MS.gene051631:CDS | 20.0% |
| !! | ATATTGTATCTCAAAATACT+GGG | + | chr1.3:5700773-5700792 | None:intergenic | 20.0% |
| !! | ATCACATTTACATAAATCAA+AGG | + | chr1.3:5698771-5698790 | None:intergenic | 20.0% |
| !! | ATGTATTCATAGAATTGATT+CGG | - | chr1.3:5699047-5699066 | MS.gene051631:intron | 20.0% |
| !! | ATGTATTCTTAGAATTGATT+TGG | - | chr1.3:5699023-5699042 | MS.gene051631:intron | 20.0% |
| !! | ATTTCTGCTGTTAAATTATT+AGG | - | chr1.3:5700187-5700206 | MS.gene051631:intron | 20.0% |
| !! | GAAAACAAGTTTGTAATAAA+AGG | + | chr1.3:5698614-5698633 | None:intergenic | 20.0% |
| !! | GAAAGAACATTAAAAATTGA+AGG | - | chr1.3:5698041-5698060 | MS.gene051631:intron | 20.0% |
| !! | GATTTATGTAAATGTGATTT+AGG | - | chr1.3:5698773-5698792 | MS.gene051631:intron | 20.0% |
| !! | GTGGTTATTATTAATGTTAT+TGG | - | chr1.3:5697855-5697874 | MS.gene051631:intron | 20.0% |
| !! | TAATTGAATTGTGATAAAAG+AGG | + | chr1.3:5696099-5696118 | None:intergenic | 20.0% |
| !! | TACAATTCTATTGCAAAATA+TGG | + | chr1.3:5700742-5700761 | None:intergenic | 20.0% |
| !! | TATATTGTATCTCAAAATAC+TGG | + | chr1.3:5700774-5700793 | None:intergenic | 20.0% |
| !! | TGTGAACAACAATAATATAA+GGG | + | chr1.3:5697957-5697976 | None:intergenic | 20.0% |
| !! | TTCATTGTTGGAAATATTTA+TGG | - | chr1.3:5700031-5700050 | MS.gene051631:intron | 20.0% |
| !! | TTGTGAACAACAATAATATA+AGG | + | chr1.3:5697958-5697977 | None:intergenic | 20.0% |
| !!! | AATTTTTAATGTTCTTTCAG+TGG | + | chr1.3:5698039-5698058 | None:intergenic | 20.0% |
| !!! | AATTTTTCTTCTTTTTTGGT+TGG | - | chr1.3:5697661-5697680 | MS.gene051631:intron | 20.0% |
| !!! | ACTCAATTTTTCTTCTTTTT+TGG | - | chr1.3:5697657-5697676 | MS.gene051631:intron | 20.0% |
| !!! | AGTATGGATTTGAAATATAT+AGG | - | chr1.3:5697355-5697374 | MS.gene051631:intron | 20.0% |
| !!! | ATTAACTCTAATATTTGTTG+CGG | - | chr1.3:5700325-5700344 | MS.gene051631:intron | 20.0% |
| !!! | ATTTTGGAGTGATTTATATT+TGG | + | chr1.3:5696361-5696380 | None:intergenic | 20.0% |
| !!! | CTGTTGATTATAATAATCAT+AGG | + | chr1.3:5701389-5701408 | None:intergenic | 20.0% |
| !!! | TAGTTCTTACTAATTGATTT+GGG | - | chr1.3:5698582-5698601 | MS.gene051631:intron | 20.0% |
| !!! | TCTTGACAATTTGTATATTT+TGG | - | chr1.3:5700622-5700641 | MS.gene051631:intron | 20.0% |
| !!! | TGATTTTAATAGAGTCTATT+TGG | - | chr1.3:5696151-5696170 | MS.gene051631:CDS | 20.0% |
| !!! | TGTATTCTTAGAATTGATTT+GGG | - | chr1.3:5699024-5699043 | MS.gene051631:intron | 20.0% |
| !!! | TTAATGAATCAGTTTCTTTT+GGG | - | chr1.3:5697466-5697485 | MS.gene051631:intron | 20.0% |
| !!! | TTAGTTCTTACTAATTGATT+TGG | - | chr1.3:5698581-5698600 | MS.gene051631:intron | 20.0% |
| !!! | TTATACGTACTTTTATTTGA+GGG | - | chr1.3:5700428-5700447 | MS.gene051631:intron | 20.0% |
| !!! | TTTAATGAATCAGTTTCTTT+TGG | - | chr1.3:5697465-5697484 | MS.gene051631:intron | 20.0% |
| !!! | TTTATACGTACTTTTATTTG+AGG | - | chr1.3:5700427-5700446 | MS.gene051631:intron | 20.0% |
| ! | AAACAATCATGGTTGAAAAA+AGG | + | chr1.3:5699619-5699638 | None:intergenic | 25.0% |
| ! | AACAAGCTTAATTATTGTGT+GGG | + | chr1.3:5698423-5698442 | None:intergenic | 25.0% |
| ! | AACTAAACAAGCTAAATGTA+GGG | + | chr1.3:5700687-5700706 | None:intergenic | 25.0% |
| ! | AAGACTCATTTGAATTAGTA+TGG | - | chr1.3:5697339-5697358 | MS.gene051631:intron | 25.0% |
| ! | AATTGAATCTGCAAAACAAT+TGG | - | chr1.3:5698076-5698095 | MS.gene051631:intron | 25.0% |
| ! | ACTAATCTATTTGGAGAATT+AGG | + | chr1.3:5696901-5696920 | None:intergenic | 25.0% |
| ! | ATAAATCATCATCATTGTTG+TGG | - | chr1.3:5697836-5697855 | MS.gene051631:intron | 25.0% |
| ! | ATGATAAAAATTACGAGAAG+AGG | + | chr1.3:5700307-5700326 | None:intergenic | 25.0% |
| ! | CAATTCTATTGCAAAATATG+GGG | + | chr1.3:5700740-5700759 | None:intergenic | 25.0% |
| ! | CTTAAAACTCAATTCTTTCT+TGG | - | chr1.3:5698395-5698414 | MS.gene051631:intron | 25.0% |
| ! | GTATAGACTAAGTATATGTT+CGG | + | chr1.3:5696622-5696641 | None:intergenic | 25.0% |
| ! | GTTTGTTCTCTTAGATTATT+GGG | - | chr1.3:5700539-5700558 | MS.gene051631:intron | 25.0% |
| ! | TAACTAAACAAGCTAAATGT+AGG | + | chr1.3:5700688-5700707 | None:intergenic | 25.0% |
| ! | TACATTATCAGATACCATAT+GGG | + | chr1.3:5700964-5700983 | None:intergenic | 25.0% |
| ! | TAGTTTAACAACTACAAAAC+AGG | + | chr1.3:5700153-5700172 | None:intergenic | 25.0% |
| ! | TATAATTCCTATGAGTATCT+AGG | + | chr1.3:5699231-5699250 | None:intergenic | 25.0% |
| ! | TATCTTACCATCTAAACATT+TGG | + | chr1.3:5698655-5698674 | None:intergenic | 25.0% |
| ! | TATTATGCCAAATACAAGTT+GGG | + | chr1.3:5699537-5699556 | None:intergenic | 25.0% |
| ! | TGTATGTAATACTACATCTT+GGG | - | chr1.3:5701068-5701087 | MS.gene051631:CDS | 25.0% |
| ! | TTAAAATTATGCAGTATACG+AGG | + | chr1.3:5699567-5699586 | None:intergenic | 25.0% |
| ! | TTACATTATCAGATACCATA+TGG | + | chr1.3:5700965-5700984 | None:intergenic | 25.0% |
| ! | TTTATGTCTATGTCTATAGA+TGG | - | chr1.3:5699468-5699487 | MS.gene051631:intron | 25.0% |
| ! | TTTCTATTTACTTGTAGCAA+AGG | - | chr1.3:5700583-5700602 | MS.gene051631:intron | 25.0% |
| !! | AGTTTGTTCTCTTAGATTAT+TGG | - | chr1.3:5700538-5700557 | MS.gene051631:intron | 25.0% |
| !! | ATTGTTAGCTTAAACAATCA+TGG | + | chr1.3:5699630-5699649 | None:intergenic | 25.0% |
| !! | TAAGATCACGATTTTTACTT+TGG | - | chr1.3:5698497-5698516 | MS.gene051631:intron | 25.0% |
| !! | TATACCTCTACAATCAATTT+TGG | + | chr1.3:5696377-5696396 | None:intergenic | 25.0% |
| !! | TGATTCTAGAAAGTAGAAAT+TGG | - | chr1.3:5696461-5696480 | MS.gene051631:CDS | 25.0% |
| !! | TGTATTCATAGAATTGATTC+GGG | - | chr1.3:5699048-5699067 | MS.gene051631:intron | 25.0% |
| !! | TTAGTTGTTAAGCATTTTAG+TGG | - | chr1.3:5700232-5700251 | MS.gene051631:intron | 25.0% |
| !!! | ACAAGATTTTAAAACAAAGC+AGG | + | chr1.3:5698870-5698889 | None:intergenic | 25.0% |
| !!! | AGTTCTTACTAATTGATTTG+GGG | - | chr1.3:5698583-5698602 | MS.gene051631:intron | 25.0% |
| !!! | ATTGTACGGTTAGTTTATAT+TGG | - | chr1.3:5699302-5699321 | MS.gene051631:intron | 25.0% |
| !!! | ATTTGTATATTTTGGAGTCA+TGG | - | chr1.3:5700630-5700649 | MS.gene051631:intron | 25.0% |
| !!! | ATTTGTGTTGTGTTTTTAAC+AGG | - | chr1.3:5697489-5697508 | MS.gene051631:intron | 25.0% |
| AAATCCAACAGTAAAGCATA+GGG | + | chr1.3:5698137-5698156 | None:intergenic | 30.0% | |
| AACAAAACAAAATGAAGGCA+TGG | + | chr1.3:5697797-5697816 | None:intergenic | 30.0% | |
| AAGAAGATTGAAATCCCTAA+TGG | - | chr1.3:5696775-5696794 | MS.gene051631:CDS | 30.0% | |
| AAGATTCCAAATAACAAGGT+GGG | - | chr1.3:5697583-5697602 | MS.gene051631:intron | 30.0% | |
| AATTATAGCCTGTTCAATAG+TGG | - | chr1.3:5699244-5699263 | MS.gene051631:intron | 30.0% | |
| AGATACAGACAATAACTACA+AGG | + | chr1.3:5698234-5698253 | None:intergenic | 30.0% | |
| AGCACAACAAAACAAAATGA+AGG | + | chr1.3:5697802-5697821 | None:intergenic | 30.0% | |
| ATACCATATGGGATTAGAAA+GGG | + | chr1.3:5700953-5700972 | None:intergenic | 30.0% | |
| ATATGATATTCATTGCCTCA+AGG | + | chr1.3:5700805-5700824 | None:intergenic | 30.0% | |
| CAATATAGTGTATTTCCTTG+AGG | - | chr1.3:5700787-5700806 | MS.gene051631:intron | 30.0% | |
| CATGAAGATTCCAAATAACA+AGG | - | chr1.3:5697579-5697598 | MS.gene051631:intron | 30.0% | |
| CTATTATGCCAAATACAAGT+TGG | + | chr1.3:5699538-5699557 | None:intergenic | 30.0% | |
| CTGTATGTAATACTACATCT+TGG | - | chr1.3:5701067-5701086 | MS.gene051631:CDS | 30.0% | |
| GAACAAGCTTAATTATTGTG+TGG | + | chr1.3:5698424-5698443 | None:intergenic | 30.0% | |
| GCAACTAAAATTGAGTATAG+AGG | - | chr1.3:5696207-5696226 | MS.gene051631:CDS | 30.0% | |
| GTAAGCTCAACTAATCTATT+TGG | + | chr1.3:5696910-5696929 | None:intergenic | 30.0% | |
| GTTAGTTATGAAGTAAATCC+AGG | + | chr1.3:5699956-5699975 | None:intergenic | 30.0% | |
| GTTTGTTCTCCTAGATTATT+GGG | - | chr1.3:5700461-5700480 | MS.gene051631:CDS | 30.0% | |
| TAATAAGACCACTATTGAAC+AGG | + | chr1.3:5699255-5699274 | None:intergenic | 30.0% | |
| TAGATTATTGGGTGAAGTTT+GGG | - | chr1.3:5700472-5700491 | MS.gene051631:CDS | 30.0% | |
| TAGATTATTGGGTGATGTTT+GGG | - | chr1.3:5700550-5700569 | MS.gene051631:intron | 30.0% | |
| TTAGATTATTGGGTGATGTT+TGG | - | chr1.3:5700549-5700568 | MS.gene051631:intron | 30.0% | |
| TTGTACTTGTATGTTCTTTC+AGG | - | chr1.3:5697980-5697999 | MS.gene051631:intron | 30.0% | |
| TTTAATGAGTTCGAAATCAG+CGG | + | chr1.3:5695952-5695971 | None:intergenic | 30.0% | |
| ! | AATAGATTAGTTGAGCTTAC+TGG | - | chr1.3:5696910-5696929 | MS.gene051631:intron | 30.0% |
| ! | ACAATTGACTTTGACATGTT+TGG | - | chr1.3:5696396-5696415 | MS.gene051631:CDS | 30.0% |
| ! | AGAATTGATTCTGACATGTT+TGG | - | chr1.3:5696233-5696252 | MS.gene051631:CDS | 30.0% |
| ! | AGTTTGTTCTCCTAGATTAT+TGG | - | chr1.3:5700460-5700479 | MS.gene051631:CDS | 30.0% |
| ! | CACAATAATTAAGCTTGTTC+AGG | - | chr1.3:5698424-5698443 | MS.gene051631:intron | 30.0% |
| ! | TTGGCGTAAAAGTTTTTGAT+AGG | - | chr1.3:5697261-5697280 | MS.gene051631:intron | 30.0% |
| !! | CTTGTTATTTGGAATCTTCA+TGG | + | chr1.3:5697581-5697600 | None:intergenic | 30.0% |
| !! | GTTGGTGTTATTATTGGAAA+AGG | - | chr1.3:5696802-5696821 | MS.gene051631:CDS | 30.0% |
| !! | TGTACTGATTAGTTCATTGT+TGG | - | chr1.3:5700019-5700038 | MS.gene051631:intron | 30.0% |
| !! | TGTGTTGATTAGTTCATTGT+GGG | - | chr1.3:5699690-5699709 | MS.gene051631:intron | 30.0% |
| !! | TTGTGTTGATTAGTTCATTG+TGG | - | chr1.3:5699689-5699708 | MS.gene051631:intron | 30.0% |
| !!! | TTCTTCTTTTTTGGTTGGAA+TGG | - | chr1.3:5697666-5697685 | MS.gene051631:intron | 30.0% |
| AAGTATCTTCAGTTGCAATC+TGG | - | chr1.3:5696838-5696857 | MS.gene051631:CDS | 35.0% | |
| AATAATCATAGGTAGACTGC+TGG | + | chr1.3:5701378-5701397 | None:intergenic | 35.0% | |
| ACAACTACAAAACAGGATGT+TGG | + | chr1.3:5700146-5700165 | None:intergenic | 35.0% | |
| AGATTATTGGGTGAAGTTTG+GGG | - | chr1.3:5700473-5700492 | MS.gene051631:CDS | 35.0% | |
| AGATTATTGGGTGATGTTTG+GGG | - | chr1.3:5700551-5700570 | MS.gene051631:intron | 35.0% | |
| AGATTGAAATCCCTAATGGA+AGG | - | chr1.3:5696779-5696798 | MS.gene051631:CDS | 35.0% | |
| AGCAAAACAAGCTATAACCA+AGG | + | chr1.3:5698162-5698181 | None:intergenic | 35.0% | |
| AGCAATATGAGAGGAAATCA+AGG | + | chr1.3:5700398-5700417 | None:intergenic | 35.0% | |
| AGCTTAGCCAAATGTTTAGA+TGG | - | chr1.3:5698645-5698664 | MS.gene051631:intron | 35.0% | |
| ATAATCATAGGTAGACTGCT+GGG | + | chr1.3:5701377-5701396 | None:intergenic | 35.0% | |
| ATGTACGTACTTCTATCTGA+TGG | - | chr1.3:5700506-5700525 | MS.gene051631:CDS | 35.0% | |
| ATTCATTTCGAATAGGGAGA+GGG | - | chr1.3:5700865-5700884 | MS.gene051631:intron | 35.0% | |
| ATTCTCTTATGATTGCTGGA+TGG | - | chr1.3:5698356-5698375 | MS.gene051631:intron | 35.0% | |
| ATTTCCTCTCATATTGCTGT+TGG | - | chr1.3:5700400-5700419 | MS.gene051631:intron | 35.0% | |
| CAAACTTCACCCAATAATCT+AGG | + | chr1.3:5700473-5700492 | None:intergenic | 35.0% | |
| CAAATCCAACAGTAAAGCAT+AGG | + | chr1.3:5698138-5698157 | None:intergenic | 35.0% | |
| CACTCCAAAATTGATTGTAG+AGG | - | chr1.3:5696370-5696389 | MS.gene051631:CDS | 35.0% | |
| CTAGATTATTGGGTGAAGTT+TGG | - | chr1.3:5700471-5700490 | MS.gene051631:CDS | 35.0% | |
| CTATGCTTTACTGTTGGATT+TGG | - | chr1.3:5698136-5698155 | MS.gene051631:intron | 35.0% | |
| CTGAAAAATGGGAGTCAAAA+CGG | + | chr1.3:5699506-5699525 | None:intergenic | 35.0% | |
| CTTAGAAATCCATCAATGTC+CGG | - | chr1.3:5701142-5701161 | MS.gene051631:CDS | 35.0% | |
| GAAGATTCCAAATAACAAGG+TGG | - | chr1.3:5697582-5697601 | MS.gene051631:intron | 35.0% | |
| GATAAGTAGCCATTTCTTCA+TGG | - | chr1.3:5698671-5698690 | MS.gene051631:intron | 35.0% | |
| GATACCATATGGGATTAGAA+AGG | + | chr1.3:5700954-5700973 | None:intergenic | 35.0% | |
| GATTGAAATCCCTAATGGAA+GGG | - | chr1.3:5696780-5696799 | MS.gene051631:CDS | 35.0% | |
| GCAATATGAGAGGAAATCAA+GGG | + | chr1.3:5700397-5700416 | None:intergenic | 35.0% | |
| GGATGTTGGAATAAGAGTTT+CGG | + | chr1.3:5700132-5700151 | None:intergenic | 35.0% | |
| GTACCCATTCATTTCGAATA+GGG | - | chr1.3:5700859-5700878 | MS.gene051631:intron | 35.0% | |
| GTGTAAGAAACACCAACAAA+GGG | + | chr1.3:5699353-5699372 | None:intergenic | 35.0% | |
| GTGTAGATGTGATCATTGTA+TGG | - | chr1.3:5697429-5697448 | MS.gene051631:intron | 35.0% | |
| GTTTCGGAATAAAAAGCTTC+AGG | + | chr1.3:5700116-5700135 | None:intergenic | 35.0% | |
| TAAACCAACAGCAATATGAG+AGG | + | chr1.3:5700407-5700426 | None:intergenic | 35.0% | |
| TACCATATGGGATTAGAAAG+GGG | + | chr1.3:5700952-5700971 | None:intergenic | 35.0% | |
| TATGATCAGCAGCAAATCTA+TGG | - | chr1.3:5701580-5701599 | MS.gene051631:intron | 35.0% | |
| TCATATGCTGGAGTTATGTT+TGG | - | chr1.3:5699753-5699772 | MS.gene051631:intron | 35.0% | |
| TCGAAATGAATGGGTACAAA+AGG | + | chr1.3:5700856-5700875 | None:intergenic | 35.0% | |
| TCTAAGAGAACAAACTTGAC+TGG | + | chr1.3:5700534-5700553 | None:intergenic | 35.0% | |
| TCTCCCTATTCGAAATGAAT+GGG | + | chr1.3:5700865-5700884 | None:intergenic | 35.0% | |
| TCTGATACCCAACTTGTATT+TGG | - | chr1.3:5699527-5699546 | MS.gene051631:intron | 35.0% | |
| TGCTATTCTCTTATGATTGC+TGG | - | chr1.3:5698352-5698371 | MS.gene051631:intron | 35.0% | |
| TGCTATTGTTCATGCATTGA+AGG | - | chr1.3:5698469-5698488 | MS.gene051631:intron | 35.0% | |
| TGTACCCATTCATTTCGAAT+AGG | - | chr1.3:5700858-5700877 | MS.gene051631:intron | 35.0% | |
| TGTGTAAGAAACACCAACAA+AGG | + | chr1.3:5699354-5699373 | None:intergenic | 35.0% | |
| TTAGATTCATAGGGATGTCT+GGG | - | chr1.3:5699189-5699208 | MS.gene051631:intron | 35.0% | |
| TTATGCAGTATACGAGGTTA+AGG | + | chr1.3:5699561-5699580 | None:intergenic | 35.0% | |
| TTCTCTTATGATTGCTGGAT+GGG | - | chr1.3:5698357-5698376 | MS.gene051631:intron | 35.0% | |
| TTGCAAAATATGGGGTGATA+TGG | + | chr1.3:5700732-5700751 | None:intergenic | 35.0% | |
| TTTAGATTCATAGGGATGTC+TGG | - | chr1.3:5699188-5699207 | MS.gene051631:intron | 35.0% | |
| ! | AACAAAGCACCATAACAAGA+AGG | + | chr1.3:5700271-5700290 | None:intergenic | 35.0% |
| ! | ATGTTGCGCTTTAGATTCAT+AGG | - | chr1.3:5699179-5699198 | MS.gene051631:intron | 35.0% |
| ! | CTGAATCTCTTATTTCAACC+TGG | - | chr1.3:5699935-5699954 | MS.gene051631:CDS | 35.0% |
| ! | CTGAGCATCAAGTCTTATAT+TGG | - | chr1.3:5699412-5699431 | MS.gene051631:intron | 35.0% |
| ! | GAATACGAAGGTATACTCAT+AGG | + | chr1.3:5696739-5696758 | None:intergenic | 35.0% |
| ! | GCATCAAGTCTTATATTGGT+CGG | - | chr1.3:5699416-5699435 | MS.gene051631:intron | 35.0% |
| ! | GTGTTTTGTACATTACTCCT+AGG | + | chr1.3:5697609-5697628 | None:intergenic | 35.0% |
| ! | TGCAGATTCAATTTGTTCAG+AGG | + | chr1.3:5698069-5698088 | None:intergenic | 35.0% |
| ! | TGGTGGATATTCTACCAATT+GGG | - | chr1.3:5701333-5701352 | MS.gene051631:intron | 35.0% |
| ! | TGTTGCGCTTTAGATTCATA+GGG | - | chr1.3:5699180-5699199 | MS.gene051631:intron | 35.0% |
| ! | TTCCATGTTAGTGTCACTAA+TGG | + | chr1.3:5699329-5699348 | None:intergenic | 35.0% |
| ! | TTTTATGCTGGAGCTATGTT+TGG | - | chr1.3:5700082-5700101 | MS.gene051631:intron | 35.0% |
| !! | ATTCATAGAATTGATTCGGG+AGG | - | chr1.3:5699051-5699070 | MS.gene051631:intron | 35.0% |
| !! | CTACAGGTTGGTCTTATAAT+CGG | - | chr1.3:5697701-5697720 | MS.gene051631:intron | 35.0% |
| !! | GGTGTTATTATTGGAAAAGG+TGG | - | chr1.3:5696805-5696824 | MS.gene051631:CDS | 35.0% |
| !! | GTACTTTTATTTGAGGGTTC+CGG | - | chr1.3:5700434-5700453 | MS.gene051631:intron | 35.0% |
| !! | GTTGGTCTTATAATCGGTAA+AGG | - | chr1.3:5697707-5697726 | MS.gene051631:intron | 35.0% |
| AAAAAGCCTGCGCAAAAGAT+TGG | + | chr1.3:5699129-5699148 | None:intergenic | 40.0% | |
| AAACGGACCAAATTCGACAA+CGG | - | chr1.3:5696035-5696054 | MS.gene051631:CDS | 40.0% | |
| AAGCACCATAACAAGAAGGT+AGG | + | chr1.3:5700267-5700286 | None:intergenic | 40.0% | |
| AATCAAGGGATAAAGACGAG+TGG | + | chr1.3:5700383-5700402 | None:intergenic | 40.0% | |
| AATCCAAGTTACCCGTGATA+TGG | - | chr1.3:5696867-5696886 | MS.gene051631:CDS | 40.0% | |
| ACCACCAACTATGGATCAAA+AGG | - | chr1.3:5701643-5701662 | MS.gene051631:intron | 40.0% | |
| ACTGACCTGATGAATCGTAA+GGG | + | chr1.3:5696070-5696089 | None:intergenic | 40.0% | |
| ATAACACCAACCCTTCCATT+AGG | + | chr1.3:5696793-5696812 | None:intergenic | 40.0% | |
| ATAACCAGGTTGTTGAGAAG+CGG | + | chr1.3:5701224-5701243 | None:intergenic | 40.0% | |
| ATACCTTCGTATTCGCATCA+AGG | - | chr1.3:5696745-5696764 | MS.gene051631:CDS | 40.0% | |
| ATCAACAACCACCACAATCA+GGG | - | chr1.3:5701539-5701558 | MS.gene051631:intron | 40.0% | |
| CAACCTTCACAACAAGGTTA+TGG | - | chr1.3:5701691-5701710 | MS.gene051631:intron | 40.0% | |
| CACCAACTATGGATCAAAAG+GGG | - | chr1.3:5701645-5701664 | MS.gene051631:intron | 40.0% | |
| CATATAGACTGCATAAGCAG+CGG | + | chr1.3:5700659-5700678 | None:intergenic | 40.0% | |
| CATATGCTTGTCTACTTCTG+TGG | - | chr1.3:5700820-5700839 | MS.gene051631:intron | 40.0% | |
| CATCAATGAAGTTCTTGCTG+AGG | - | chr1.3:5696966-5696985 | MS.gene051631:intron | 40.0% | |
| CATTCATTTCGAATAGGGAG+AGG | - | chr1.3:5700864-5700883 | MS.gene051631:intron | 40.0% | |
| CCACCAACTATGGATCAAAA+GGG | - | chr1.3:5701644-5701663 | MS.gene051631:intron | 40.0% | |
| CTAACATGGAATCCCTTTGT+TGG | - | chr1.3:5699338-5699357 | MS.gene051631:intron | 40.0% | |
| CTCTCCCTATTCGAAATGAA+TGG | + | chr1.3:5700866-5700885 | None:intergenic | 40.0% | |
| CTTCGAAGCAAAACTAGACT+TGG | + | chr1.3:5698194-5698213 | None:intergenic | 40.0% | |
| GACCATTAGTGACACTAACA+TGG | - | chr1.3:5699324-5699343 | MS.gene051631:intron | 40.0% | |
| GATTATTGGGTGAAGTTTGG+GGG | - | chr1.3:5700474-5700493 | MS.gene051631:CDS | 40.0% | |
| GATTCAGAATGAAAAGCTGC+TGG | + | chr1.3:5699922-5699941 | None:intergenic | 40.0% | |
| GGGTATCAGACCTGAAAAAT+GGG | + | chr1.3:5699517-5699536 | None:intergenic | 40.0% | |
| GGTGTTTCTTACACATGCAA+GGG | - | chr1.3:5699359-5699378 | MS.gene051631:intron | 40.0% | |
| GTATATTCTCAGGATGGCTA+TGG | - | chr1.3:5701511-5701530 | MS.gene051631:intron | 40.0% | |
| GTCACAACCTAGATACTCAT+AGG | - | chr1.3:5699221-5699240 | MS.gene051631:intron | 40.0% | |
| TAACACCAACCCTTCCATTA+GGG | + | chr1.3:5696792-5696811 | None:intergenic | 40.0% | |
| TAACTCCAGCATACAACAAG+AGG | + | chr1.3:5699884-5699903 | None:intergenic | 40.0% | |
| TAACTCCAGCATATGACACA+AGG | + | chr1.3:5699749-5699768 | None:intergenic | 40.0% | |
| TACAACTGGAGCAAGAATTC+AGG | - | chr1.3:5697757-5697776 | MS.gene051631:intron | 40.0% | |
| TACCATCAGCAGAATATGCT+GGG | + | chr1.3:5702119-5702138 | None:intergenic | 40.0% | |
| TACCCCTTTCTAATCCCATA+TGG | - | chr1.3:5700947-5700966 | MS.gene051631:intron | 40.0% | |
| TACCTTCGTATTCGCATCAA+GGG | - | chr1.3:5696746-5696765 | MS.gene051631:CDS | 40.0% | |
| TAGCCATTTCTTCATGGCTA+AGG | - | chr1.3:5698677-5698696 | MS.gene051631:intron | 40.0% | |
| TAGGATCAGCATCCATATCA+CGG | + | chr1.3:5696882-5696901 | None:intergenic | 40.0% | |
| TATCAACAACCACCACAATC+AGG | - | chr1.3:5701538-5701557 | MS.gene051631:intron | 40.0% | |
| TCACTCCTACCTTCTTGTTA+TGG | - | chr1.3:5700259-5700278 | MS.gene051631:CDS | 40.0% | |
| TCTAGGAGAACAAACTTGAC+CGG | + | chr1.3:5700456-5700475 | None:intergenic | 40.0% | |
| TCTTGACCTATGCAATCTGT+CGG | - | chr1.3:5698548-5698567 | MS.gene051631:intron | 40.0% | |
| TGCTGCTGATCATATGATGT+TGG | + | chr1.3:5701574-5701593 | None:intergenic | 40.0% | |
| TGGGTATCAGACCTGAAAAA+TGG | + | chr1.3:5699518-5699537 | None:intergenic | 40.0% | |
| TGGTGTTTCTTACACATGCA+AGG | - | chr1.3:5699358-5699377 | MS.gene051631:intron | 40.0% | |
| TGTACCCTATGCTTTACTGT+TGG | - | chr1.3:5698130-5698149 | MS.gene051631:intron | 40.0% | |
| TTACCATCAGCAGAATATGC+TGG | + | chr1.3:5702120-5702139 | None:intergenic | 40.0% | |
| TTCTTACACATGCAAGGGTA+TGG | - | chr1.3:5699364-5699383 | MS.gene051631:intron | 40.0% | |
| TTTACTGTTGGATTTGGCCT+TGG | - | chr1.3:5698142-5698161 | MS.gene051631:intron | 40.0% | |
| ! | AAGAGTATGCAAGCTACAAC+TGG | - | chr1.3:5697743-5697762 | MS.gene051631:intron | 40.0% |
| ! | AATGAAGGCATGGCTTAAGA+AGG | + | chr1.3:5697787-5697806 | None:intergenic | 40.0% |
| ! | AATGACAATGTGTTTGCTGC+AGG | + | chr1.3:5699787-5699806 | None:intergenic | 40.0% |
| ! | ATCCCCTTTTGATCCATAGT+TGG | + | chr1.3:5701650-5701669 | None:intergenic | 40.0% |
| ! | ATGGTTTTTCCTGTGTCTAC+AGG | - | chr1.3:5697685-5697704 | MS.gene051631:intron | 40.0% |
| ! | CATAACCTTGTTGTGAAGGT+TGG | + | chr1.3:5701693-5701712 | None:intergenic | 40.0% |
| ! | CTACCATAACCTTGTTGTGA+AGG | + | chr1.3:5701697-5701716 | None:intergenic | 40.0% |
| ! | CTGGTGGATATTCTACCAAT+TGG | - | chr1.3:5701332-5701351 | MS.gene051631:intron | 40.0% |
| ! | GGGATTAGAAAGGGGTATAA+AGG | + | chr1.3:5700944-5700963 | None:intergenic | 40.0% |
| ! | GGTCTTATAATCGGTAAAGG+TGG | - | chr1.3:5697710-5697729 | MS.gene051631:intron | 40.0% |
| ! | TGTTGTGCGTTGAGTTCTTT+TGG | - | chr1.3:5697634-5697653 | MS.gene051631:intron | 40.0% |
| ! | TTGGTTGATTCAATCCTCAG+TGG | - | chr1.3:5698095-5698114 | MS.gene051631:intron | 40.0% |
| ! | TTTTTCCTGTGTCTACAGGT+TGG | - | chr1.3:5697689-5697708 | MS.gene051631:intron | 40.0% |
| !! | AACTCAGTTTTGTCTCGATC+TGG | - | chr1.3:5700905-5700924 | MS.gene051631:intron | 40.0% |
| !! | AGTTTTGTCTCGATCTGGTA+CGG | - | chr1.3:5700910-5700929 | MS.gene051631:intron | 40.0% |
| !! | ATCCATAGTTGGTGGTAGTT+TGG | + | chr1.3:5701639-5701658 | None:intergenic | 40.0% |
| !! | GGAAGGGTTGGTGTTATTAT+TGG | - | chr1.3:5696796-5696815 | MS.gene051631:CDS | 40.0% |
| !! | TGTTTTTAACAGGCTGAGTC+TGG | - | chr1.3:5697499-5697518 | MS.gene051631:intron | 40.0% |
| !!! | ACTTGGCTTTTGAGTTTGAG+GGG | + | chr1.3:5701848-5701867 | None:intergenic | 40.0% |
| !!! | ATTGTGAGCTGGTTTTTGGA+GGG | - | chr1.3:5697084-5697103 | MS.gene051631:intron | 40.0% |
| !!! | CACTTGGCTTTTGAGTTTGA+GGG | + | chr1.3:5701849-5701868 | None:intergenic | 40.0% |
| !!! | CGTTTTGACTCCCATTTTTC+AGG | - | chr1.3:5699504-5699523 | MS.gene051631:intron | 40.0% |
| !!! | TGTCATTGTGAGCTGGTTTT+TGG | - | chr1.3:5697080-5697099 | MS.gene051631:intron | 40.0% |
| AATGAGTTCGAAATCAGCGG+TGG | + | chr1.3:5695949-5695968 | None:intergenic | 45.0% | |
| ACCATCAGCAGAATATGCTG+GGG | + | chr1.3:5702118-5702137 | None:intergenic | 45.0% | |
| ACGAGAAGAGGCTATAAGAG+CGG | + | chr1.3:5700295-5700314 | None:intergenic | 45.0% | |
| ACGCCTTAGCCATGAAGAAA+TGG | + | chr1.3:5698683-5698702 | None:intergenic | 45.0% | |
| ACGTTGTTGTAAGAAGGAGG+AGG | + | chr1.3:5695915-5695934 | None:intergenic | 45.0% | |
| AGAAATCCATCAATGTCCGG+TGG | - | chr1.3:5701145-5701164 | MS.gene051631:CDS | 45.0% | |
| AGAATATCCACCAGCTGAGT+GGG | + | chr1.3:5701326-5701345 | None:intergenic | 45.0% | |
| AGGATCAGCATCCATATCAC+GGG | + | chr1.3:5696881-5696900 | None:intergenic | 45.0% | |
| AGTATCTAGGTTGTGACCAG+AGG | + | chr1.3:5699218-5699237 | None:intergenic | 45.0% | |
| CACTGACCTGATGAATCGTA+AGG | + | chr1.3:5696071-5696090 | None:intergenic | 45.0% | |
| CATCCATATCACGGGTAACT+TGG | + | chr1.3:5696873-5696892 | None:intergenic | 45.0% | |
| CCATAACCAGACTGTGTTTG+AGG | + | chr1.3:5701823-5701842 | None:intergenic | 45.0% | |
| CCTCAAACACAGTCTGGTTA+TGG | - | chr1.3:5701820-5701839 | MS.gene051631:intron | 45.0% | |
| CCTCAAACTCAAAAGCCAAG+TGG | - | chr1.3:5701847-5701866 | MS.gene051631:intron | 45.0% | |
| CTGACCTGATGAATCGTAAG+GGG | + | chr1.3:5696069-5696088 | None:intergenic | 45.0% | |
| CTTCTCAGTCCTTGCTAACT+CGG | - | chr1.3:5698943-5698962 | MS.gene051631:intron | 45.0% | |
| CTTGTTACTCGACGAATGAC+TGG | - | chr1.3:5697532-5697551 | MS.gene051631:intron | 45.0% | |
| GAAATCCCTAATGGAAGGGT+TGG | - | chr1.3:5696784-5696803 | MS.gene051631:CDS | 45.0% | |
| GACACAAAACCGAGTTAGCA+AGG | + | chr1.3:5698955-5698974 | None:intergenic | 45.0% | |
| GCAAAACTAGACTTGGCACA+TGG | + | chr1.3:5698187-5698206 | None:intergenic | 45.0% | |
| GCTTCTCAACAACCTGGTTA+TGG | - | chr1.3:5701223-5701242 | MS.gene051631:CDS | 45.0% | |
| GGTTATGGTCCTCCATCATA+TGG | - | chr1.3:5702006-5702025 | MS.gene051631:CDS | 45.0% | |
| GTGGATAGTTGGCAGCATTT+GGG | + | chr1.3:5701735-5701754 | None:intergenic | 45.0% | |
| GTTGGGAATATCCAGAAGGA+GGG | + | chr1.3:5701954-5701973 | None:intergenic | 45.0% | |
| GTTGTCCTTGTGTCATATGC+TGG | - | chr1.3:5699741-5699760 | MS.gene051631:intron | 45.0% | |
| TAAGACCAACCTGTAGACAC+AGG | + | chr1.3:5697697-5697716 | None:intergenic | 45.0% | |
| TAGAATATCCACCAGCTGAG+TGG | + | chr1.3:5701327-5701346 | None:intergenic | 45.0% | |
| TAGCTCCAGCATAAAACACG+AGG | + | chr1.3:5700078-5700097 | None:intergenic | 45.0% | |
| TATTGGGTGATGTTTGGGGA+AGG | - | chr1.3:5700555-5700574 | MS.gene051631:intron | 45.0% | |
| TCATATGGTCCTCCGTCATA+TGG | - | chr1.3:5702021-5702040 | MS.gene051631:CDS | 45.0% | |
| TCTGGTTGGGAATATCCAGA+AGG | + | chr1.3:5701958-5701977 | None:intergenic | 45.0% | |
| TTCGTCGTACTTGCGTTTCA+GGG | + | chr1.3:5695847-5695866 | None:intergenic | 45.0% | |
| TTGCTGAGGCACATTGTACT+GGG | + | chr1.3:5701284-5701303 | None:intergenic | 45.0% | |
| TTGGGAATATCCAGAAGGAG+GGG | + | chr1.3:5701953-5701972 | None:intergenic | 45.0% | |
| TTGTTGTAAGAAGGAGGAGG+AGG | + | chr1.3:5695912-5695931 | None:intergenic | 45.0% | |
| ! | AACCAGACTGTGTTTGAGGT+TGG | + | chr1.3:5701819-5701838 | None:intergenic | 45.0% |
| ! | ATCCGCTGGTTATAACCAAC+CGG | - | chr1.3:5701483-5701502 | MS.gene051631:intron | 45.0% |
| ! | CCCTTTTGATCCATAGTTGG+TGG | + | chr1.3:5701647-5701666 | None:intergenic | 45.0% |
| ! | CTGCTGATGGTAATGCAAGT+GGG | - | chr1.3:5702127-5702146 | MS.gene051631:CDS | 45.0% |
| ! | GTGATACCAATCTTTTGCGC+AGG | - | chr1.3:5699120-5699139 | MS.gene051631:intron | 45.0% |
| ! | GTTGTCCTCGTGTTTTATGC+TGG | - | chr1.3:5700070-5700089 | MS.gene051631:intron | 45.0% |
| ! | GTTGTCCTCTTGTTGTATGC+TGG | - | chr1.3:5699876-5699895 | MS.gene051631:intron | 45.0% |
| ! | TATGACGGAGGACCATATGA+TGG | + | chr1.3:5702021-5702040 | None:intergenic | 45.0% |
| ! | TCTGCTGATGGTAATGCAAG+TGG | - | chr1.3:5702126-5702145 | MS.gene051631:CDS | 45.0% |
| ! | TTTTAACAGGCTGAGTCTGG+AGG | - | chr1.3:5697502-5697521 | MS.gene051631:intron | 45.0% |
| !! | CTATGCAATCTGTCGGCTTT+CGG | - | chr1.3:5698555-5698574 | MS.gene051631:intron | 45.0% |
| !! | TAACCTGCATAAGCTTGCTG+AGG | + | chr1.3:5701298-5701317 | None:intergenic | 45.0% |
| !!! | AGCTGGTTTTTGGAGGGTTT+TGG | - | chr1.3:5697090-5697109 | MS.gene051631:intron | 45.0% |
| !!! | CATTGTGAGCTGGTTTTTGG+AGG | - | chr1.3:5697083-5697102 | MS.gene051631:intron | 45.0% |
| !!! | CCACTTGGCTTTTGAGTTTG+AGG | + | chr1.3:5701850-5701869 | None:intergenic | 45.0% |
| !!! | CTTGGCTTTTGAGTTTGAGG+GGG | + | chr1.3:5701847-5701866 | None:intergenic | 45.0% |
| !!! | TATTTTTTATTTGAAAATAT+AGG | - | chr1.3:5697388-5697407 | MS.gene051631:intron | 5.0% |
| AAGCTATGGGTCAGCTCAAG+AGG | - | chr1.3:5701612-5701631 | MS.gene051631:intron | 50.0% | |
| AAGGTTGGACAGGTGGAACT+TGG | + | chr1.3:5701678-5701697 | None:intergenic | 50.0% | |
| ACCTTGCTGAGAGTAACCAC+CGG | + | chr1.3:5701164-5701183 | None:intergenic | 50.0% | |
| ACTCGACGAATGACTGGACA+GGG | - | chr1.3:5697538-5697557 | MS.gene051631:intron | 50.0% | |
| ACTTAGCCCTCCAAAGCTCT+TGG | + | chr1.3:5697118-5697137 | None:intergenic | 50.0% | |
| AGCCAACCTCAAACACAGTC+TGG | - | chr1.3:5701814-5701833 | MS.gene051631:intron | 50.0% | |
| AGCTATGGGTCAGCTCAAGA+GGG | - | chr1.3:5701613-5701632 | MS.gene051631:intron | 50.0% | |
| AGGAGGACCGTTGTCGAATT+TGG | + | chr1.3:5696045-5696064 | None:intergenic | 50.0% | |
| AGGTTGGACAGGTGGAACTT+GGG | + | chr1.3:5701677-5701696 | None:intergenic | 50.0% | |
| ATTCCTCTTCATCTTCCCCC+AGG | - | chr1.3:5698005-5698024 | MS.gene051631:intron | 50.0% | |
| CAAAACATACCTCGCCACTG+AGG | + | chr1.3:5698112-5698131 | None:intergenic | 50.0% | |
| CCAAATAACAAGGTGGGCCT+AGG | - | chr1.3:5697589-5697608 | MS.gene051631:intron | 50.0% | |
| CCATAACCTCCAGCAGCATT+AGG | + | chr1.3:5701904-5701923 | None:intergenic | 50.0% | |
| CCTAATGCTGCTGGAGGTTA+TGG | - | chr1.3:5701901-5701920 | MS.gene051631:intron | 50.0% | |
| CCTGATGAATCGTAAGGGGA+AGG | + | chr1.3:5696065-5696084 | None:intergenic | 50.0% | |
| CCTGTCCAACCTTCACAACA+AGG | - | chr1.3:5701685-5701704 | MS.gene051631:intron | 50.0% | |
| CCTTCCCCTTACGATTCATC+AGG | - | chr1.3:5696062-5696081 | MS.gene051631:CDS | 50.0% | |
| CGAAAGCCGACAGATTGCAT+AGG | + | chr1.3:5698557-5698576 | None:intergenic | 50.0% | |
| CTCAGCAAGGTTACCAAGCT+CGG | - | chr1.3:5701173-5701192 | MS.gene051631:CDS | 50.0% | |
| CTCCATCATAGCTACCACCA+CGG | + | chr1.3:5702158-5702177 | None:intergenic | 50.0% | |
| CTCCCTCTGATGTCGTCAAA+CGG | - | chr1.3:5696018-5696037 | MS.gene051631:CDS | 50.0% | |
| CTCGATCTGGTACGGTATGT+TGG | - | chr1.3:5700918-5700937 | MS.gene051631:intron | 50.0% | |
| CTGAGGATAACCAGCACCAT+AGG | + | chr1.3:5702094-5702113 | None:intergenic | 50.0% | |
| CTGCCAACTATCCACCACAA+GGG | - | chr1.3:5701740-5701759 | MS.gene051631:intron | 50.0% | |
| CTGGAGGTTATGGTCAACCT+GGG | - | chr1.3:5701911-5701930 | MS.gene051631:intron | 50.0% | |
| CTTGAGCTGACCCATAGCTT+GGG | + | chr1.3:5701612-5701631 | None:intergenic | 50.0% | |
| CTTGCTGAGGCACATTGTAC+TGG | + | chr1.3:5701285-5701304 | None:intergenic | 50.0% | |
| GAATATCCACCAGCTGAGTG+GGG | + | chr1.3:5701325-5701344 | None:intergenic | 50.0% | |
| GACCCTTGATGCGAATACGA+AGG | + | chr1.3:5696751-5696770 | None:intergenic | 50.0% | |
| GACTGTGATTGTCCGTATGC+AGG | + | chr1.3:5701880-5701899 | None:intergenic | 50.0% | |
| GAGTAACCACCGGACATTGA+TGG | + | chr1.3:5701154-5701173 | None:intergenic | 50.0% | |
| GATGAATCGTAAGGGGAAGG+AGG | + | chr1.3:5696062-5696081 | None:intergenic | 50.0% | |
| GATGGAGGACCATAACCAGA+AGG | + | chr1.3:5702003-5702022 | None:intergenic | 50.0% | |
| GGATATTCCCAACCAGAAGC+AGG | - | chr1.3:5701961-5701980 | MS.gene051631:CDS | 50.0% | |
| GGCACATTGTACTGGGAAGT+TGG | + | chr1.3:5701277-5701296 | None:intergenic | 50.0% | |
| GGCCAAACTACCACCAACTA+TGG | - | chr1.3:5701634-5701653 | MS.gene051631:intron | 50.0% | |
| GGGACGTTGTTGTAAGAAGG+AGG | + | chr1.3:5695918-5695937 | None:intergenic | 50.0% | |
| GGGCAGGTATATTCTCAGGA+TGG | - | chr1.3:5701505-5701524 | MS.gene051631:intron | 50.0% | |
| GGTCGGTATGATGTCATCAC+TGG | - | chr1.3:5699433-5699452 | MS.gene051631:intron | 50.0% | |
| GGTGGATAGTTGGCAGCATT+TGG | + | chr1.3:5701736-5701755 | None:intergenic | 50.0% | |
| GGTTGGGAATATCCAGAAGG+AGG | + | chr1.3:5701955-5701974 | None:intergenic | 50.0% | |
| GTCCGTTTGACGACATCAGA+GGG | + | chr1.3:5696023-5696042 | None:intergenic | 50.0% | |
| GTTCGTCGTACTTGCGTTTC+AGG | + | chr1.3:5695848-5695867 | None:intergenic | 50.0% | |
| TACAATCAACCACCATCCGC+TGG | - | chr1.3:5701469-5701488 | MS.gene051631:intron | 50.0% | |
| TACTCGACGAATGACTGGAC+AGG | - | chr1.3:5697537-5697556 | MS.gene051631:intron | 50.0% | |
| TACTTGCGTTTCAGGGAAGG+TGG | + | chr1.3:5695840-5695859 | None:intergenic | 50.0% | |
| TAGTTGGCAGCATTTGGGCT+AGG | + | chr1.3:5701730-5701749 | None:intergenic | 50.0% | |
| TATTGGGTGAAGTTTGGGGG+AGG | - | chr1.3:5700477-5700496 | MS.gene051631:CDS | 50.0% | |
| TCACAGTCACCTAATGCTGC+TGG | - | chr1.3:5701892-5701911 | MS.gene051631:intron | 50.0% | |
| TCCATCATAGCTACCACCAC+GGG | + | chr1.3:5702157-5702176 | None:intergenic | 50.0% | |
| TCCTGAGAATATACCTGCCC+CGG | + | chr1.3:5701505-5701524 | None:intergenic | 50.0% | |
| TCGTACTTGCGTTTCAGGGA+AGG | + | chr1.3:5695843-5695862 | None:intergenic | 50.0% | |
| TCTTGAGCTGACCCATAGCT+TGG | + | chr1.3:5701613-5701632 | None:intergenic | 50.0% | |
| TGAGCATACCCTGATTGTGG+TGG | + | chr1.3:5701550-5701569 | None:intergenic | 50.0% | |
| TGATTCAATCCTCAGTGGCG+AGG | - | chr1.3:5698100-5698119 | MS.gene051631:intron | 50.0% | |
| TGCCAACTATCCACCACAAG+GGG | - | chr1.3:5701741-5701760 | MS.gene051631:intron | 50.0% | |
| TGGGAATATCCAGAAGGAGG+GGG | + | chr1.3:5701952-5701971 | None:intergenic | 50.0% | |
| TGGTTATAACCAGCGGATGG+TGG | + | chr1.3:5701481-5701500 | None:intergenic | 50.0% | |
| TGTACTGGGAAGTTGGACCA+GGG | + | chr1.3:5701270-5701289 | None:intergenic | 50.0% | |
| TGTGATTGTCCGTATGCAGG+CGG | + | chr1.3:5701877-5701896 | None:intergenic | 50.0% | |
| TGTTGTGAAGGTTGGACAGG+TGG | + | chr1.3:5701685-5701704 | None:intergenic | 50.0% | |
| TTGAGCTGACCCATAGCTTG+GGG | + | chr1.3:5701611-5701630 | None:intergenic | 50.0% | |
| TTGTAAGCAGTCCCATCAGC+TGG | + | chr1.3:5701448-5701467 | None:intergenic | 50.0% | |
| TTGTACTGGGAAGTTGGACC+AGG | + | chr1.3:5701271-5701290 | None:intergenic | 50.0% | |
| TTTCAGTGGATGTGTCGCCT+GGG | + | chr1.3:5698025-5698044 | None:intergenic | 50.0% | |
| TTTGAGAGCCTGCTTCTGGT+TGG | + | chr1.3:5701972-5701991 | None:intergenic | 50.0% | |
| ! | AGAGCACCACCTTCTGGTTA+TGG | - | chr1.3:5701991-5702010 | MS.gene051631:CDS | 50.0% |
| ! | CCTTGTTGTGAAGGTTGGAC+AGG | + | chr1.3:5701688-5701707 | None:intergenic | 50.0% |
| ! | GGTTGGTTATAACCAGCGGA+TGG | + | chr1.3:5701484-5701503 | None:intergenic | 50.0% |
| ! | TATGATGGAGCACCTGCACA+GGG | - | chr1.3:5702168-5702187 | MS.gene051631:CDS | 50.0% |
| ! | TCCGCTGGTTATAACCAACC+GGG | - | chr1.3:5701484-5701503 | MS.gene051631:intron | 50.0% |
| ! | TTGAGAGCCTGCTTCTGGTT+GGG | + | chr1.3:5701971-5701990 | None:intergenic | 50.0% |
| ! | TTGGCTGCCATATGCTGCTT+GGG | + | chr1.3:5701800-5701819 | None:intergenic | 50.0% |
| ! | TTTGGAGCCAAGAGCTTTGG+AGG | - | chr1.3:5697108-5697127 | MS.gene051631:intron | 50.0% |
| !! | CCTAGGCCCACCTTGTTATT+TGG | + | chr1.3:5697592-5697611 | None:intergenic | 50.0% |
| !! | CTATGGTGCTGGTTATCCTC+AGG | - | chr1.3:5702092-5702111 | MS.gene051631:CDS | 50.0% |
| !! | CTTAGGGTGTCATTGTGAGC+TGG | - | chr1.3:5697073-5697092 | MS.gene051631:intron | 50.0% |
| !! | TCTCAAAGAGCACCACCTTC+TGG | - | chr1.3:5701985-5702004 | MS.gene051631:CDS | 50.0% |
| !! | TTGGAGCCAAGAGCTTTGGA+GGG | - | chr1.3:5697109-5697128 | MS.gene051631:intron | 50.0% |
| !!! | GGTTTTGGAGCCAAGAGCTT+TGG | - | chr1.3:5697105-5697124 | MS.gene051631:intron | 50.0% |
| AAACCGGTGGTTCGTGAGTG+AGG | + | chr1.3:5695879-5695898 | None:intergenic | 55.0% | |
| AATATCCAGAAGGAGGGGGC+TGG | + | chr1.3:5701948-5701967 | None:intergenic | 55.0% | |
| AATGCAAGTGGGAATGCCCG+TGG | - | chr1.3:5702138-5702157 | MS.gene051631:CDS | 55.0% | |
| ACCGGGGCAGGTATATTCTC+AGG | - | chr1.3:5701501-5701520 | MS.gene051631:intron | 55.0% | |
| AGGGATGTCTGGGTTTCCTC+TGG | - | chr1.3:5699199-5699218 | MS.gene051631:intron | 55.0% | |
| AGGTTGTTGAGAAGCGGCAG+GGG | + | chr1.3:5701218-5701237 | None:intergenic | 55.0% | |
| AGTGGTACTCCGCCTGCATA+CGG | - | chr1.3:5701865-5701884 | MS.gene051631:intron | 55.0% | |
| AGTTCGAAATCAGCGGTGGC+GGG | + | chr1.3:5695945-5695964 | None:intergenic | 55.0% | |
| ATATCCAGAAGGAGGGGGCT+GGG | + | chr1.3:5701947-5701966 | None:intergenic | 55.0% | |
| ATGGCTCAGCCCCAAGCTAT+GGG | - | chr1.3:5701599-5701618 | MS.gene051631:intron | 55.0% | |
| CAGCAACAGCAGAATCCTGG+TGG | - | chr1.3:5701412-5701431 | MS.gene051631:intron | 55.0% | |
| CAGGCACCACATGGTTCCTA+TGG | - | chr1.3:5702075-5702094 | MS.gene051631:CDS | 55.0% | |
| CAGGCTGAGTCTGGAGGTAA+TGG | - | chr1.3:5697508-5697527 | MS.gene051631:intron | 55.0% | |
| CAGGTTGTTGAGAAGCGGCA+GGG | + | chr1.3:5701219-5701238 | None:intergenic | 55.0% | |
| CAGTCACCTAATGCTGCTGG+AGG | - | chr1.3:5701895-5701914 | MS.gene051631:intron | 55.0% | |
| CCAACCTCCCAAGCAGCATA+TGG | - | chr1.3:5701790-5701809 | MS.gene051631:intron | 55.0% | |
| CCACATGGTTCCTATGGTGC+TGG | - | chr1.3:5702081-5702100 | MS.gene051631:CDS | 55.0% | |
| CCAGCACCATAGGAACCATG+TGG | + | chr1.3:5702084-5702103 | None:intergenic | 55.0% | |
| CCAGGATTCTGCTGTTGCTG+AGG | + | chr1.3:5701412-5701431 | None:intergenic | 55.0% | |
| CCTCAGCAACAGCAGAATCC+TGG | - | chr1.3:5701409-5701428 | MS.gene051631:intron | 55.0% | |
| CGGTCAACCTGGTTATGGTC+AGG | - | chr1.3:5702056-5702075 | MS.gene051631:CDS | 55.0% | |
| CTTTCAGTGGATGTGTCGCC+TGG | + | chr1.3:5698026-5698045 | None:intergenic | 55.0% | |
| GACGGAGGACCATATGATGG+AGG | + | chr1.3:5702018-5702037 | None:intergenic | 55.0% | |
| GAGAATATACCTGCCCCGGT+TGG | + | chr1.3:5701501-5701520 | None:intergenic | 55.0% | |
| GAGTTCGAAATCAGCGGTGG+CGG | + | chr1.3:5695946-5695965 | None:intergenic | 55.0% | |
| GCCCCAGCATATTCTGCTGA+TGG | - | chr1.3:5702114-5702133 | MS.gene051631:CDS | 55.0% | |
| GCTGCCAACTATCCACCACA+AGG | - | chr1.3:5701739-5701758 | MS.gene051631:intron | 55.0% | |
| GCTGGAGGTTATGGTCAACC+TGG | - | chr1.3:5701910-5701929 | MS.gene051631:intron | 55.0% | |
| GGAGGACCATAACCAGAAGG+TGG | + | chr1.3:5702000-5702019 | None:intergenic | 55.0% | |
| GGCTGAGCATACCCTGATTG+TGG | + | chr1.3:5701553-5701572 | None:intergenic | 55.0% | |
| GGCTGCTCAGCCAAGTTATG+GGG | - | chr1.3:5701762-5701781 | MS.gene051631:intron | 55.0% | |
| GGCTGTGCATAGCCATAACC+AGG | + | chr1.3:5701238-5701257 | None:intergenic | 55.0% | |
| GGGCTGCTCAGCCAAGTTAT+GGG | - | chr1.3:5701761-5701780 | MS.gene051631:intron | 55.0% | |
| GGGGGGACGTTGTTGTAAGA+AGG | + | chr1.3:5695921-5695940 | None:intergenic | 55.0% | |
| GGTCCGTTTGACGACATCAG+AGG | + | chr1.3:5696024-5696043 | None:intergenic | 55.0% | |
| GGTTATGGCTATGCACAGCC+TGG | - | chr1.3:5701238-5701257 | MS.gene051631:CDS | 55.0% | |
| GGTTATGGTCAGGCACCACA+TGG | - | chr1.3:5702066-5702085 | MS.gene051631:CDS | 55.0% | |
| GTGCCTCAGCAAGCTTATGC+AGG | - | chr1.3:5701292-5701311 | MS.gene051631:CDS | 55.0% | |
| GTTGGCGGTACCCCATAACT+TGG | + | chr1.3:5701775-5701794 | None:intergenic | 55.0% | |
| GTTGGCTGCCATATGCTGCT+TGG | + | chr1.3:5701801-5701820 | None:intergenic | 55.0% | |
| TAAGCAGTCCCATCAGCTGG+AGG | + | chr1.3:5701445-5701464 | None:intergenic | 55.0% | |
| TATGGCTCAGCCCCAAGCTA+TGG | - | chr1.3:5701598-5701617 | MS.gene051631:intron | 55.0% | |
| TCATATGGTGCTCCTGCAGG+CGG | - | chr1.3:5702036-5702055 | MS.gene051631:CDS | 55.0% | |
| TCCGGTGGTTACTCTCAGCA+AGG | - | chr1.3:5701160-5701179 | MS.gene051631:CDS | 55.0% | |
| TGGTTATAACCAACCGGGGC+AGG | - | chr1.3:5701489-5701508 | MS.gene051631:intron | 55.0% | |
| TGTGGTGCCTGACCATAACC+AGG | + | chr1.3:5702066-5702085 | None:intergenic | 55.0% | |
| TTCAGTGGATGTGTCGCCTG+GGG | + | chr1.3:5698024-5698043 | None:intergenic | 55.0% | |
| ! | CAGCATTTGGGCTAGGCTGT+TGG | + | chr1.3:5701723-5701742 | None:intergenic | 55.0% |
| ! | CCATATGCTGCTTGGGAGGT+TGG | + | chr1.3:5701793-5701812 | None:intergenic | 55.0% |
| ! | CCCCGGTTGGTTATAACCAG+CGG | + | chr1.3:5701488-5701507 | None:intergenic | 55.0% |
| ! | CCGCTGGTTATAACCAACCG+GGG | - | chr1.3:5701485-5701504 | MS.gene051631:intron | 55.0% |
| ! | CTATGATGGAGCACCTGCAC+AGG | - | chr1.3:5702167-5702186 | MS.gene051631:CDS | 55.0% |
| ! | GCTCTTTGAGAGCCTGCTTC+TGG | + | chr1.3:5701976-5701995 | None:intergenic | 55.0% |
| ! | TATGCAGGCGGAGTACCACT+TGG | + | chr1.3:5701865-5701884 | None:intergenic | 55.0% |
| ! | TATGCTGCTTGGGAGGTTGG+CGG | + | chr1.3:5701790-5701809 | None:intergenic | 55.0% |
| !! | AGCCCCTTGTGGTGGATAGT+TGG | + | chr1.3:5701746-5701765 | None:intergenic | 55.0% |
| !! | CCTGCAGGAGCACCATATGA+CGG | + | chr1.3:5702036-5702055 | None:intergenic | 55.0% |
| !! | TGCAGTGGACTGGTCCCAAT+TGG | + | chr1.3:5701350-5701369 | None:intergenic | 55.0% |
| AGAAGGAGGAGGAGGTCCGT+CGG | + | chr1.3:5695904-5695923 | None:intergenic | 60.0% | |
| AGACTGCTGGGCAGTTGCAG+TGG | + | chr1.3:5701365-5701384 | None:intergenic | 60.0% | |
| AGGAGGTCCGTCGGAGAAAC+CGG | + | chr1.3:5695895-5695914 | None:intergenic | 60.0% | |
| CCAGGTTGTTGAGAAGCGGC+AGG | + | chr1.3:5701220-5701239 | None:intergenic | 60.0% | |
| CCGTCATATGGTGCTCCTGC+AGG | - | chr1.3:5702033-5702052 | MS.gene051631:CDS | 60.0% | |
| CCTCCTCACTCACGAACCAC+CGG | - | chr1.3:5695873-5695892 | MS.gene051631:CDS | 60.0% | |
| CGACGAATGACTGGACAGGG+TGG | - | chr1.3:5697541-5697560 | MS.gene051631:intron | 60.0% | |
| GACGACATCAGAGGGAGCAG+CGG | + | chr1.3:5696015-5696034 | None:intergenic | 60.0% | |
| GCAGAATATGCTGGGGCCTG+AGG | + | chr1.3:5702111-5702130 | None:intergenic | 60.0% | |
| GCAGGCGGTCAACCTGGTTA+TGG | - | chr1.3:5702051-5702070 | MS.gene051631:CDS | 60.0% | |
| GCCCGTGGTGGTAGCTATGA+TGG | - | chr1.3:5702153-5702172 | MS.gene051631:CDS | 60.0% | |
| GGGGCTGCTCAGCCAAGTTA+TGG | - | chr1.3:5701760-5701779 | MS.gene051631:intron | 60.0% | |
| GGTTATCCTCCCCACTCAGC+TGG | - | chr1.3:5701313-5701332 | MS.gene051631:intron | 60.0% | |
| GGTTGTTGAGAAGCGGCAGG+GGG | + | chr1.3:5701217-5701236 | None:intergenic | 60.0% | |
| GTCCTGCACCTCCAGCTGAT+GGG | - | chr1.3:5701434-5701453 | MS.gene051631:intron | 60.0% | |
| GTGGTTCGTGAGTGAGGAGG+TGG | + | chr1.3:5695873-5695892 | None:intergenic | 60.0% | |
| GTTGGACCAGGGTATGCTCC+AGG | + | chr1.3:5701259-5701278 | None:intergenic | 60.0% | |
| TATCCACCAGCTGAGTGGGG+AGG | + | chr1.3:5701322-5701341 | None:intergenic | 60.0% | |
| TATCCTCCCCACTCAGCTGG+TGG | - | chr1.3:5701316-5701335 | MS.gene051631:intron | 60.0% | |
| TCAGTGGATGTGTCGCCTGG+GGG | + | chr1.3:5698023-5698042 | None:intergenic | 60.0% | |
| TCGCCTGGGGGAAGATGAAG+AGG | + | chr1.3:5698011-5698030 | None:intergenic | 60.0% | |
| ! | CCTGCCGCTTCTCAACAACC+TGG | - | chr1.3:5701217-5701236 | MS.gene051631:CDS | 60.0% |
| ! | GCTGCCATATGCTGCTTGGG+AGG | + | chr1.3:5701797-5701816 | None:intergenic | 60.0% |
| ! | TAACCAGGTTGACCGCCTGC+AGG | + | chr1.3:5702051-5702070 | None:intergenic | 60.0% |
| !! | CGAACCACCGGTTTCTCCGA+CGG | - | chr1.3:5695885-5695904 | MS.gene051631:CDS | 60.0% |
| !! | GCAGGAGCACCATATGACGG+AGG | + | chr1.3:5702033-5702052 | None:intergenic | 60.0% |
| AAGCTCGGCCACCCTCTAGC+TGG | - | chr1.3:5701188-5701207 | MS.gene051631:CDS | 65.0% | |
| ACCTGCACAGGGAGCTCAGC+AGG | - | chr1.3:5702179-5702198 | MS.gene051631:CDS | 65.0% | |
| AGCTAGAGGGTGGCCGAGCT+TGG | + | chr1.3:5701189-5701208 | None:intergenic | 65.0% | |
| AGCTCGGCCACCCTCTAGCT+GGG | - | chr1.3:5701189-5701208 | MS.gene051631:CDS | 65.0% | |
| AGGTCCGTCGGAGAAACCGG+TGG | + | chr1.3:5695892-5695911 | None:intergenic | 65.0% | |
| CCGGTGGTTCGTGAGTGAGG+AGG | + | chr1.3:5695876-5695895 | None:intergenic | 65.0% | |
| CTTGGCTGAGCAGCCCCTTG+TGG | + | chr1.3:5701757-5701776 | None:intergenic | 65.0% | |
| GCAAGTGGGAATGCCCGTGG+TGG | - | chr1.3:5702141-5702160 | MS.gene051631:CDS | 65.0% | |
| GCACAGCCTGGAGCATACCC+TGG | - | chr1.3:5701250-5701269 | MS.gene051631:CDS | 65.0% | |
| GCTGGGCAGTTGCAGTGGAC+TGG | + | chr1.3:5701360-5701379 | None:intergenic | 65.0% | |
| GGCACCAGAGAGGAGACGAG+CGG | + | chr1.3:5695994-5696013 | None:intergenic | 65.0% | |
| GGCTGGGAAGGAGGATACCC+AGG | + | chr1.3:5701931-5701950 | None:intergenic | 65.0% | |
| GGTCCTGCACCTCCAGCTGA+TGG | - | chr1.3:5701433-5701452 | MS.gene051631:intron | 65.0% | |
| ! | GGGAGAGGGTGTGCTTCTGC+TGG | - | chr1.3:5700879-5700898 | MS.gene051631:intron | 65.0% |
| ! | GTCCCATCAGCTGGAGGTGC+AGG | + | chr1.3:5701439-5701458 | None:intergenic | 65.0% |
| !! | AAATCAGCGGTGGCGGGAGG+GGG | + | chr1.3:5695939-5695958 | None:intergenic | 65.0% |
| !! | CGAAATCAGCGGTGGCGGGA+GGG | + | chr1.3:5695941-5695960 | None:intergenic | 65.0% |
| !! | GAAATCAGCGGTGGCGGGAG+GGG | + | chr1.3:5695940-5695959 | None:intergenic | 65.0% |
| !! | TCGAAATCAGCGGTGGCGGG+AGG | + | chr1.3:5695942-5695961 | None:intergenic | 65.0% |
| AGGGAGCAGCGGCACCAGAG+AGG | + | chr1.3:5696004-5696023 | None:intergenic | 70.0% | |
| CCAGAAGGAGGGGGCTGGGA+AGG | + | chr1.3:5701943-5701962 | None:intergenic | 70.0% | |
| CCTTCCCAGCCCCCTCCTTC+TGG | - | chr1.3:5701940-5701959 | MS.gene051631:intron | 70.0% | |
| GAAGGAGGGGGCTGGGAAGG+AGG | + | chr1.3:5701940-5701959 | None:intergenic | 70.0% | |
| GCAGGGGGAGCCCAGCTAGA+GGG | + | chr1.3:5701202-5701221 | None:intergenic | 70.0% | |
| GCCTGCTGAGCTCCCTGTGC+AGG | + | chr1.3:5702183-5702202 | None:intergenic | 70.0% | |
| GCTCCTGCAGGCGGTCAACC+TGG | - | chr1.3:5702045-5702064 | MS.gene051631:CDS | 70.0% | |
| GGCTGAGCAGCCCCTTGTGG+TGG | + | chr1.3:5701754-5701773 | None:intergenic | 70.0% | |
| GTCGCCGCTCGTCTCCTCTC+TGG | - | chr1.3:5695987-5696006 | MS.gene051631:CDS | 70.0% | |
| ! | GCTGGAGGTGCAGGACCACC+AGG | + | chr1.3:5701430-5701449 | None:intergenic | 70.0% |
| !! | AATCAGCGGTGGCGGGAGGG+GGG | + | chr1.3:5695938-5695957 | None:intergenic | 70.0% |
| GGCAGGGGGAGCCCAGCTAG+AGG | + | chr1.3:5701203-5701222 | None:intergenic | 75.0% | |
| GGGGGAGCCCAGCTAGAGGG+TGG | + | chr1.3:5701199-5701218 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5695807 | 5702230 | 5695807 | ID=MS.gene051631 |
| chr1.3 | mRNA | 5695807 | 5702230 | 5695807 | ID=MS.gene051631.t1;Parent=MS.gene051631 |
| chr1.3 | exon | 5701954 | 5702230 | 5701954 | ID=MS.gene051631.t1.exon1;Parent=MS.gene051631.t1 |
| chr1.3 | CDS | 5701954 | 5702230 | 5701954 | ID=cds.MS.gene051631.t1;Parent=MS.gene051631.t1 |
| chr1.3 | exon | 5701050 | 5701324 | 5701050 | ID=MS.gene051631.t1.exon2;Parent=MS.gene051631.t1 |
| chr1.3 | CDS | 5701050 | 5701324 | 5701050 | ID=cds.MS.gene051631.t1;Parent=MS.gene051631.t1 |
| chr1.3 | exon | 5700437 | 5700526 | 5700437 | ID=MS.gene051631.t1.exon3;Parent=MS.gene051631.t1 |
| chr1.3 | CDS | 5700437 | 5700526 | 5700437 | ID=cds.MS.gene051631.t1;Parent=MS.gene051631.t1 |
| chr1.3 | exon | 5700259 | 5700330 | 5700259 | ID=MS.gene051631.t1.exon4;Parent=MS.gene051631.t1 |
| chr1.3 | CDS | 5700259 | 5700330 | 5700259 | ID=cds.MS.gene051631.t1;Parent=MS.gene051631.t1 |
| chr1.3 | exon | 5699916 | 5700035 | 5699916 | ID=MS.gene051631.t1.exon5;Parent=MS.gene051631.t1 |
| chr1.3 | CDS | 5699916 | 5700035 | 5699916 | ID=cds.MS.gene051631.t1;Parent=MS.gene051631.t1 |
| chr1.3 | exon | 5695807 | 5696901 | 5695807 | ID=MS.gene051631.t1.exon6;Parent=MS.gene051631.t1 |
| chr1.3 | CDS | 5695807 | 5696901 | 5695807 | ID=cds.MS.gene051631.t1;Parent=MS.gene051631.t1 |
| Gene Sequence |
| Protein sequence |