AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42827

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42827.t1 MTR_2g094020 94.662 843 45 0 1 843 1 843 0.0 1664
MS.gene42827.t1 MTR_2g094060 91.637 837 66 1 1 837 1 833 0.0 1585
MS.gene42827.t1 MTR_2g094060 91.056 805 68 1 1 805 1 801 0.0 1513
MS.gene42827.t1 MTR_4g059680 77.619 840 182 3 1 836 1 838 0.0 1364
MS.gene42827.t1 MTR_2g094060 91.594 690 54 1 1 690 1 686 0.0 1300
MS.gene42827.t1 MTR_5g021190 54.366 859 349 16 1 837 1 838 0.0 932
MS.gene42827.t1 MTR_8g016230 53.638 852 361 12 3 836 2 837 0.0 927
MS.gene42827.t1 MTR_2g100110 54.207 832 353 10 18 836 24 840 0.0 912
MS.gene42827.t1 MTR_8g085210 52.079 866 361 14 12 836 44 896 0.0 890
MS.gene42827.t1 MTR_1g018200 59.078 716 270 8 18 723 27 729 0.0 862
MS.gene42827.t1 MTR_2g039120 56.138 725 296 7 8 723 14 725 0.0 848
MS.gene42827.t1 MTR_2g042610 52.163 832 353 14 22 837 27 829 0.0 840
MS.gene42827.t1 MTR_1g023120 55.693 729 278 9 19 727 27 730 0.0 837
MS.gene42827.t1 MTR_3g112370 52.988 753 310 10 1 730 1 732 0.0 818
MS.gene42827.t1 MTR_3g096900 56.216 740 301 8 20 741 25 759 0.0 810
MS.gene42827.t1 MTR_2g039120 56.377 690 279 7 8 688 14 690 0.0 808
MS.gene42827.t1 MTR_5g025830 49.527 846 354 20 22 836 28 831 0.0 790
MS.gene42827.t1 MTR_1g023120 55.029 696 269 8 52 727 1 672 0.0 786
MS.gene42827.t1 MTR_5g024080 48.109 846 377 18 13 836 1 806 0.0 777
MS.gene42827.t1 MTR_3g096900 57.437 679 274 7 20 688 25 698 0.0 764
MS.gene42827.t1 MTR_3g005570 46.253 854 404 13 1 842 5 815 0.0 752
MS.gene42827.t1 MTR_4g073290 44.888 851 412 16 9 837 10 825 0.0 728
MS.gene42827.t1 MTR_2g039120 55.949 622 254 5 8 620 14 624 0.0 719
MS.gene42827.t1 MTR_3g117840 43.310 852 426 15 9 838 12 828 0.0 714
MS.gene42827.t1 MTR_2g100110 57.539 577 225 5 18 586 24 588 0.0 696
MS.gene42827.t1 MTR_2g039120 56.581 585 237 4 8 586 14 587 0.0 692
MS.gene42827.t1 MTR_3g096900 57.990 607 241 6 20 617 25 626 0.0 686
MS.gene42827.t1 MTR_3g096910 49.446 722 318 13 22 733 27 711 0.0 683
MS.gene42827.t1 MTR_3g088520 47.514 724 329 12 8 722 8 689 0.0 652
MS.gene42827.t1 MTR_3g088520 47.041 676 311 11 52 722 1 634 0.0 604
MS.gene42827.t1 MTR_3g096910 45.318 598 280 13 146 733 1 561 8.59e-165 491
MS.gene42827.t1 MTR_5g022590 40.798 326 154 7 41 364 11 299 2.79e-75 251
MS.gene42827.t1 MTR_5g022590 36.364 121 62 3 690 801 304 418 5.29e-16 81.6
MS.gene42827.t1 MTR_4g126330 36.058 416 158 10 277 688 131 442 6.86e-66 227
MS.gene42827.t1 MTR_4g126330 68.478 92 29 0 77 168 25 116 2.14e-37 146
MS.gene42827.t1 MTR_3g005610 35.816 282 146 7 438 712 27 280 3.08e-41 154
MS.gene42827.t1 MTR_2g059440 33.684 285 147 8 438 712 27 279 7.79e-35 135
MS.gene42827.t1 MTR_2g100000 29.395 347 216 8 32 353 64 406 2.26e-29 125
MS.gene42827.t1 MTR_2g059430 29.924 264 117 5 454 712 11 211 1.32e-23 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42827.t1 AT2G28470 72.397 826 215 6 21 837 31 852 0.0 1238
MS.gene42827.t1 AT2G28470 72.397 826 215 6 21 837 31 852 0.0 1238
MS.gene42827.t1 AT2G28470 72.397 826 215 6 21 837 25 846 0.0 1238
MS.gene42827.t1 AT2G28470 72.397 826 215 6 21 837 25 846 0.0 1238
MS.gene42827.t1 AT2G28470 74.336 678 164 4 19 690 29 702 0.0 1051
MS.gene42827.t1 AT4G36360 53.953 860 339 15 9 837 13 846 0.0 936
MS.gene42827.t1 AT4G36360 53.953 860 338 16 9 837 13 845 0.0 931
MS.gene42827.t1 AT3G13750 54.417 849 357 11 3 837 15 847 0.0 920
MS.gene42827.t1 AT2G32810 51.822 878 374 13 2 840 13 880 0.0 917
MS.gene42827.t1 AT2G32810 52.024 840 355 12 2 803 13 842 0.0 887
MS.gene42827.t1 AT5G20710 50.350 856 373 17 1 836 3 826 0.0 840
MS.gene42827.t1 AT4G26140 55.220 728 298 8 12 723 10 725 0.0 829
MS.gene42827.t1 AT3G52840 55.632 728 299 9 6 723 65 778 0.0 823
MS.gene42827.t1 AT3G52840 55.632 728 299 9 6 723 11 724 0.0 823
MS.gene42827.t1 AT1G45130 53.642 755 296 12 1 725 1 731 0.0 821
MS.gene42827.t1 AT4G26140 53.652 753 296 10 12 723 10 750 0.0 816
MS.gene42827.t1 AT5G56870 54.875 718 301 7 14 723 21 723 0.0 811
MS.gene42827.t1 AT5G63810 53.197 735 323 9 3 725 13 738 0.0 802
MS.gene42827.t1 AT1G31740 47.826 851 357 15 1 836 1 779 0.0 782
MS.gene42827.t1 AT4G26140 54.039 718 277 10 12 688 10 715 0.0 778
MS.gene42827.t1 AT1G77410 46.753 847 400 15 4 837 7 815 0.0 742
MS.gene42827.t1 AT1G77410 46.479 852 400 16 4 837 7 820 0.0 736
MS.gene42827.t1 AT4G26140 56.160 625 246 6 12 620 10 622 0.0 719
MS.gene42827.t1 AT4G26140 56.160 625 246 6 12 620 10 622 0.0 719
MS.gene42827.t1 AT4G26140 56.160 625 248 6 12 620 10 624 0.0 716
MS.gene42827.t1 AT1G45130 53.012 664 267 10 83 725 13 652 0.0 714
MS.gene42827.t1 AT2G16730 41.766 838 428 16 22 837 44 843 0.0 674
MS.gene42827.t1 AT5G63800 48.023 708 326 11 22 722 32 704 0.0 671
MS.gene42827.t1 AT4G35010 41.148 836 436 16 22 837 41 840 0.0 664
MS.gene42827.t1 AT4G26140 58.501 547 206 4 12 545 10 548 0.0 659
MS.gene42827.t1 AT4G26140 56.294 572 204 6 12 545 10 573 0.0 646
MS.gene42827.t1 AT4G26140 56.294 572 204 6 12 545 10 573 0.0 646
MS.gene42827.t1 AT4G38590 41.022 802 421 15 52 836 1 767 0.0 632
MS.gene42827.t1 AT4G38590 40.648 802 428 15 48 836 65 831 0.0 624
MS.gene42827.t1 AT1G77410 45.130 729 349 15 122 837 19 709 0.0 590
MS.gene42827.t1 AT1G77410 45.130 729 349 15 122 837 19 709 0.0 590
MS.gene42827.t1 AT5G20710 46.554 653 301 16 200 836 1 621 0.0 568
MS.gene42827.t1 AT2G04060 37.097 372 153 9 287 655 23 316 3.00e-57 204
MS.gene42827.t1 AT2G04062 42.286 175 80 2 20 194 5 158 8.10e-40 144
MS.gene42827.t1 AT1G72990 34.337 332 177 11 32 332 18 339 2.02e-37 150
MS.gene42827.t1 AT1G72990 34.337 332 177 11 32 332 73 394 2.77e-37 150
MS.gene42827.t1 AT1G72990 34.337 332 177 11 32 332 73 394 2.77e-37 150
MS.gene42827.t1 AT1G72990 33.333 321 173 11 43 332 22 332 2.85e-32 134
MS.gene42827.t1 AT3G53080 42.857 91 50 2 747 836 63 152 5.64e-17 79.3
MS.gene42827.t1 AT3G53075 42.857 84 45 3 754 836 81 162 5.39e-14 71.2
MS.gene42827.t1 AT3G53075 42.857 84 45 3 754 836 111 192 7.44e-14 71.6

Find 209 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTCACAAAGCTTTA+TGG 0.109681 2.3:+7867292 None:intergenic
AAACGTAGGGTCTTGATTTC+TGG 0.165476 2.3:-7869410 MS.gene42827:CDS
AACTGACAATGAACCATTTA+AGG 0.172483 2.3:-7868599 MS.gene42827:intron
TTGACAGTGGTTTCCCTCTT+TGG 0.180260 2.3:-7868651 MS.gene42827:intron
CAAATCAACGGTTGGTTCTT+AGG 0.201157 2.3:+7865542 None:intergenic
TGACATTTGGTTTGAGTAAA+AGG 0.209652 2.3:+7865233 None:intergenic
GAAGGTTACCTTACCTTAAA+TGG 0.218483 2.3:+7868586 None:intergenic
TCCATAGCTTGCAAATTTAA+TGG 0.221804 2.3:+7864849 None:intergenic
CTTTGGCTTCACTTCATTCC+AGG 0.251644 2.3:-7868634 MS.gene42827:CDS
AAAGGTGAGGCTTGGGTAAA+TGG 0.261772 2.3:-7865332 MS.gene42827:CDS
TTGATACAGGTCGGCCTAAA+AGG 0.267162 2.3:-7865623 MS.gene42827:intron
AACTTACATGAACCTGTTAA+AGG 0.282398 2.3:-7869198 MS.gene42827:CDS
CACAATTGTAGTGGCTTTCA+TGG 0.286541 2.3:+7869511 None:intergenic
GAGTTTAACAGTTGGACTTC+AGG 0.290254 2.3:-7865943 MS.gene42827:intron
CTTAGGTTTGTCTTTGTTCC+CGG 0.301351 2.3:+7866022 None:intergenic
TAGAAACTTCAAGTTCAAAA+TGG 0.304366 2.3:-7866574 MS.gene42827:CDS
CTGGTAAATCATACATCAAT+TGG 0.305487 2.3:-7868260 MS.gene42827:CDS
TTTCCCCTGATTCTGTATCT+TGG 0.306746 2.3:+7864926 None:intergenic
CATCTTTAGATTTCTGAATA+AGG 0.312398 2.3:+7869256 None:intergenic
TACATTTCAAAATTACTATA+TGG 0.316656 2.3:-7867755 MS.gene42827:intron
TATATGCTGCAGGAATTATT+AGG 0.322005 2.3:-7867352 MS.gene42827:intron
CTCTTGATACAGGTGTTCCT+TGG 0.323700 2.3:-7868218 MS.gene42827:CDS
ACTACTTGTGGTACTCATTA+AGG 0.331342 2.3:-7866457 MS.gene42827:intron
CTAAGAACCAACCGTTGATT+TGG 0.333687 2.3:-7865541 MS.gene42827:CDS
TTCGTAAACGGCAAGCTTGC+AGG 0.336185 2.3:-7866275 MS.gene42827:intron
GACAAAGCATTGGGCGATAC+TGG 0.337595 2.3:-7865310 MS.gene42827:CDS
AAGAGAACCTGGCCTTTAAC+AGG 0.337674 2.3:+7869186 None:intergenic
AAAACCTGAGATAAAATTAT+AGG 0.339759 2.3:+7868424 None:intergenic
TCCATTAAATTTGCAAGCTA+TGG 0.340886 2.3:-7864850 MS.gene42827:CDS
GACATACCATACTCATCAAT+TGG 0.345727 2.3:+7867537 None:intergenic
GCTTCAACAGCTAAACTCTT+TGG 0.347957 2.3:+7864179 None:intergenic
AGCGGTGAATCGCTTCATTT+CGG 0.355773 2.3:+7868498 None:intergenic
AAATCAACGGTTGGTTCTTA+GGG 0.361145 2.3:+7865543 None:intergenic
TTCAAAATGGAGTTGGATAA+AGG 0.363931 2.3:-7866561 MS.gene42827:CDS
GAGATTACCTGATTATGATT+AGG 0.371095 2.3:+7864874 None:intergenic
CAACACTCTTGTATTGTTTG+AGG 0.376145 2.3:-7865052 MS.gene42827:CDS
TCCACAATTCATGTGACATT+TGG 0.376285 2.3:+7865220 None:intergenic
GCCCTTCATGCCTTCGTAAA+CGG 0.381711 2.3:-7866287 MS.gene42827:CDS
GATGCCCCAATTGATGAGTA+TGG 0.385338 2.3:-7867543 MS.gene42827:intron
CGGACGCTGCAGAAGCAATA+AGG 0.386639 2.3:-7864794 MS.gene42827:CDS
TCATATGCACATCAGAACTA+TGG 0.396147 2.3:-7865828 MS.gene42827:intron
GGCCTAAAAGGTGAAGATTT+AGG 0.396713 2.3:-7865611 MS.gene42827:CDS
TGCCAGATTGAAAATGAGTA+TGG 0.398646 2.3:-7868309 MS.gene42827:intron
TGGAACCAAGATACAGAATC+AGG 0.402684 2.3:-7864931 MS.gene42827:CDS
GGAGTATCAACTGATACATT+TGG 0.403792 2.3:-7864221 MS.gene42827:CDS
TGGTTCCACAATTCTATTTG+AGG 0.405778 2.3:+7864946 None:intergenic
AGCACTACATTCTTGCAATC+TGG 0.405989 2.3:+7866878 None:intergenic
GAATTCTTAGGGAGTCAAAC+CGG 0.407325 2.3:-7866041 MS.gene42827:intron
TCTTGATACAGGTGTTCCTT+GGG 0.408696 2.3:-7868217 MS.gene42827:CDS
ATCCCGATCACAGTACTTTC+TGG 0.412854 2.3:-7865987 MS.gene42827:CDS
TTCAAACCTTTCAATATCAC+TGG 0.417812 2.3:+7865768 None:intergenic
CAAGTGTCCTAATCATAATC+AGG 0.421130 2.3:-7864881 MS.gene42827:CDS
CCCGTGAAGTCAATCGCAAC+TGG 0.421516 2.3:+7865362 None:intergenic
GGTCTCTCTAGTGGAAATTC+CGG 0.429067 2.3:-7865590 MS.gene42827:CDS
AATACAAGAGTGTTGTCGTT+TGG 0.430388 2.3:+7865060 None:intergenic
GTCCATATGTTTGTGCTGAA+TGG 0.430727 2.3:-7868749 MS.gene42827:CDS
CAATTGTGTTGGTCATGCTT+TGG 0.433167 2.3:-7869496 MS.gene42827:CDS
AGTCAATCGCAACTGGATTA+CGG 0.438682 2.3:+7865369 None:intergenic
TGCGATTGACTTCACGGGGA+TGG 0.439820 2.3:-7865357 MS.gene42827:CDS
TCCAGTTGCGATTGACTTCA+CGG 0.439836 2.3:-7865363 MS.gene42827:CDS
ACCACCTATACCTCTAGGTT+TGG 0.439893 2.3:+7867233 None:intergenic
TTAGATTTCTGAATAAGGTC+TGG 0.443250 2.3:+7869261 None:intergenic
AGTGTCCACGTTGGCGAGAA+AGG 0.447360 2.3:+7866970 None:intergenic
ACATACCATACTCATCAATT+GGG 0.447562 2.3:+7867538 None:intergenic
TTCCATTCAGCACAAACATA+TGG 0.448715 2.3:+7868747 None:intergenic
TGGACCAAGAGAAGTAATCT+TGG 0.450309 2.3:+7867253 None:intergenic
GCGATTGACTTCACGGGGAT+GGG 0.451344 2.3:-7865356 MS.gene42827:CDS
CATAGAGCATTGGTCATTGA+TGG 0.455109 2.3:-7869434 MS.gene42827:CDS
CTTCAAGTTCAAAATGGAGT+TGG 0.456846 2.3:-7866568 MS.gene42827:CDS
CTCTTTGGCACTCCTCTACA+AGG 0.457641 2.3:+7864194 None:intergenic
CAACATGTTACATGTCTGTA+TGG 0.459118 2.3:+7864141 None:intergenic
ACATGGGGAGCGGGGATCAC+CGG 0.459873 2.3:-7865792 MS.gene42827:CDS
TAAATGGTTCATTGTCAGTT+CGG 0.461736 2.3:+7868602 None:intergenic
GATGGGAAAAGGTGAGGCTT+GGG 0.463029 2.3:-7865339 MS.gene42827:CDS
GGACCAAGAGAAGTAATCTT+GGG 0.464627 2.3:+7867254 None:intergenic
ATCGCAGTAAAATCCATTGC+AGG 0.465312 2.3:+7868013 None:intergenic
TTTGGCTTCACTTCATTCCA+GGG 0.468859 2.3:-7868633 MS.gene42827:CDS
CCAACCGTTGATTTGGTACA+AGG 0.469575 2.3:-7865534 MS.gene42827:intron
TTCCAGAAAGTACTGTGATC+GGG 0.469716 2.3:+7865985 None:intergenic
GACTTCACGGGGATGGGAAA+AGG 0.474886 2.3:-7865350 MS.gene42827:CDS
GAACCCAAGATTACTTCTCT+TGG 0.475327 2.3:-7867257 MS.gene42827:CDS
ATGGCTACATCTCTTGATAC+AGG 0.477673 2.3:-7868228 MS.gene42827:CDS
GTAGCAAAAGCTATTTGTGT+TGG 0.477984 2.3:+7865015 None:intergenic
TCTTATTGACAGGCCTGCAT+TGG 0.480214 2.3:-7864263 MS.gene42827:intron
GGAGACATCGATTCAGCCTA+TGG 0.480983 2.3:-7868288 MS.gene42827:CDS
TTCCACAATTCTATTTGAGG+TGG 0.481558 2.3:+7864949 None:intergenic
ACCAACTTTGACCGAAGTAC+TGG 0.484159 2.3:-7867597 MS.gene42827:CDS
GGCGATGTCAATTGTAAAGA+AGG 0.486852 2.3:-7864773 MS.gene42827:intron
TTGATCTCTCCTCTCGGAAG+TGG 0.487529 2.3:-7865728 MS.gene42827:CDS
GGGATGTCCACATTAAGCTT+AGG 0.489061 2.3:+7866005 None:intergenic
ATATTGAAAGGTTTGAAGAA+TGG 0.489802 2.3:-7865762 MS.gene42827:CDS
TCATAACTTGTAGCAATGAA+TGG 0.491869 2.3:+7867570 None:intergenic
TGGGTAAATGGACAAAGCAT+TGG 0.493909 2.3:-7865320 MS.gene42827:CDS
GCAAGCTATGGAACACCACT+AGG 0.494447 2.3:-7864838 MS.gene42827:CDS
CTATATGTGCATCTCCGTAT+TGG 0.495851 2.3:-7868771 MS.gene42827:CDS
GGATGGGAAAAGGTGAGGCT+TGG 0.496077 2.3:-7865340 MS.gene42827:CDS
TTTCCAGAAAGTACTGTGAT+CGG 0.499351 2.3:+7865984 None:intergenic
ACAAACTTTGATGCTCCATC+CGG 0.502467 2.3:-7865392 MS.gene42827:CDS
CTTGTATTGTTTGAGGAAAG+TGG 0.502872 2.3:-7865045 MS.gene42827:CDS
ATTCATATCACTTGCCTGCA+TGG 0.503989 2.3:-7866916 MS.gene42827:CDS
GGGTAAATGGACAAAGCATT+GGG 0.505117 2.3:-7865319 MS.gene42827:CDS
TTTGAAATGTACCGCCTCGT+TGG 0.514090 2.3:+7867767 None:intergenic
TGGTAAATCATACATCAATT+GGG 0.516725 2.3:-7868259 MS.gene42827:CDS
GTGAAAGCAGTGGCTGAGGC+AGG 0.519491 2.3:-7868795 MS.gene42827:CDS
ATGTAAGTTCCAGAAAACAT+AGG 0.522734 2.3:+7869212 None:intergenic
TTCCTTCACATTGAATCGCT+CGG 0.524122 2.3:-7866314 MS.gene42827:CDS
GATTCAGCCTATGGTTCTGC+TGG 0.524874 2.3:-7868279 MS.gene42827:CDS
CTCTCGGAAGTGGACATACC+AGG 0.527776 2.3:-7865718 MS.gene42827:intron
CTTATTCAGAAATCTAAAGA+TGG 0.530946 2.3:-7869255 MS.gene42827:CDS
TCAGTTCGGAACTTAATCCC+TGG 0.533302 2.3:+7868616 None:intergenic
CATGAGATCGACAATCTTAG+CGG 0.533942 2.3:+7868480 None:intergenic
GTTGCATGAGTCTGTGCAAT+CGG 0.533957 2.3:+7865265 None:intergenic
ACCAAATGTCACATGAATTG+TGG 0.534217 2.3:-7865221 MS.gene42827:CDS
GCCAGTACTTCGGTCAAAGT+TGG 0.534915 2.3:+7867596 None:intergenic
CCAGTTGCGATTGACTTCAC+GGG 0.536094 2.3:-7865362 MS.gene42827:CDS
TGAAGGAAAGTTTGAGAACC+AGG 0.536449 2.3:+7866329 None:intergenic
ACATGAACCTGTTAAAGGCC+AGG 0.536626 2.3:-7869193 MS.gene42827:intron
GGATCAAGAAGTTGTAGTGT+TGG 0.537164 2.3:-7864242 MS.gene42827:CDS
TGCCGTTTACGAAGGCATGA+AGG 0.540448 2.3:+7866285 None:intergenic
GCATTTGAAGCAACATATGT+AGG 0.542208 2.3:+7865287 None:intergenic
CAGGCGGCAATTTATAAGAC+AGG 0.542741 2.3:-7867007 MS.gene42827:CDS
CCTTGTACCAAATCAACGGT+TGG 0.544937 2.3:+7865534 None:intergenic
GTTGATCTTAAGGATGATCC+TGG 0.545273 2.3:-7866347 MS.gene42827:CDS
TCCACAATTCTATTTGAGGT+GGG 0.553486 2.3:+7864950 None:intergenic
CTAGTGGAAATTCCGGAGGA+TGG 0.556179 2.3:-7865583 MS.gene42827:CDS
ACCTTTCAATATCACTGGAC+CGG 0.556352 2.3:+7865773 None:intergenic
TGATTTACCAGCAGAACCAT+AGG 0.557167 2.3:+7868272 None:intergenic
GTTTGTGCTGAATGGAACTA+CGG 0.558163 2.3:-7868741 MS.gene42827:CDS
ACCGGTCCAGTGATATTGAA+AGG 0.558381 2.3:-7865774 MS.gene42827:CDS
GGTCAAAGTTGGTTCCTCCA+TGG 0.559035 2.3:+7867607 None:intergenic
ATGAAGATTAATACCTGCAA+TGG 0.560132 2.3:-7868026 MS.gene42827:intron
AGACTGTGAATTCCATCCTC+CGG 0.568524 2.3:+7865571 None:intergenic
GATAAAACTGTAAATTTCAG+AGG 0.569411 2.3:-7866941 MS.gene42827:CDS
GCCGTTTACGAAGGCATGAA+GGG 0.570348 2.3:+7866286 None:intergenic
CACAAACATATGGACCAATA+CGG 0.573068 2.3:+7868757 None:intergenic
TGAATGGTCCGCCAGTACTT+CGG 0.575468 2.3:+7867586 None:intergenic
TATTGCTTCTGCAGCGTCCG+TGG 0.577381 2.3:+7864797 None:intergenic
ACATGCGGAAACTTCTACCA+CGG 0.584028 2.3:-7864814 MS.gene42827:CDS
TGTAGTGCTTAATACTGCAA+AGG 0.584106 2.3:-7866864 MS.gene42827:intron
GGAACCTGTGGGTATTTCGA+AGG 0.589135 2.3:-7866540 MS.gene42827:CDS
ATTACCTTGTACCAAATCAA+CGG 0.590007 2.3:+7865530 None:intergenic
AATTCTTAGGGAGTCAAACC+GGG 0.592065 2.3:-7866040 MS.gene42827:intron
TTACGAAGGCATGAAGGGCA+TGG 0.595701 2.3:+7866291 None:intergenic
ACAACTTCTTGATCCAATGC+AGG 0.595751 2.3:+7864250 None:intergenic
GGCCGAGCGATTCAATGTGA+AGG 0.596679 2.3:+7866312 None:intergenic
TGCAAGCTTGCCGTTTACGA+AGG 0.596822 2.3:+7866277 None:intergenic
AATCGCAACTGGATTACGGC+CGG 0.599279 2.3:+7865373 None:intergenic
GGATTATGATCATAGAGCAT+TGG 0.599952 2.3:-7869444 MS.gene42827:CDS
CTACCCTCGTAGTACTCCAC+AGG 0.600914 2.3:-7869378 MS.gene42827:intron
ACACTCTTGATCTCTCCTCT+CGG 0.601381 2.3:-7865734 MS.gene42827:CDS
GGTCATTGATGGTAAACGTA+GGG 0.603222 2.3:-7869423 MS.gene42827:CDS
TCTTTAAGATGACTCCACTT+CGG 0.604348 2.3:+7867326 None:intergenic
GAATTATTAGGCAGCCGAAG+TGG 0.606606 2.3:-7867340 MS.gene42827:CDS
GATCTGCTGAGTTTAACAGT+TGG 0.607244 2.3:-7865951 MS.gene42827:CDS
ATTTGTGAAAGCAGTGGCTG+AGG 0.607383 2.3:-7868799 MS.gene42827:CDS
CACGGGGATGGGAAAAGGTG+AGG 0.608159 2.3:-7865345 MS.gene42827:CDS
AACACTTACAATGTCTGTGA+TGG 0.608501 2.3:+7865194 None:intergenic
ATTCAGAAATCTAAAGATGG+AGG 0.610249 2.3:-7869252 MS.gene42827:CDS
GCAACTGGATTACGGCCGGA+TGG 0.610380 2.3:+7865377 None:intergenic
CTCTCTAGTGGAAATTCCGG+AGG 0.610446 2.3:-7865587 MS.gene42827:CDS
GAAGATTTAGGTCTCTCTAG+TGG 0.612338 2.3:-7865599 MS.gene42827:CDS
GGAATGAAGTGAAGCCAAAG+AGG 0.616620 2.3:+7868637 None:intergenic
GAAAGCCACTACAATTGTGT+TGG 0.616676 2.3:-7869507 MS.gene42827:CDS
GGAACCAAGATACAGAATCA+GGG 0.617716 2.3:-7864930 MS.gene42827:CDS
ACATTTGGAGACCCTTGTAG+AGG 0.618423 2.3:-7864206 MS.gene42827:CDS
ACATTGGTGCATAACATCGT+TGG 0.619883 2.3:+7869467 None:intergenic
GATTATGATTAGGACACTTG+AGG 0.623557 2.3:+7864884 None:intergenic
ACCCACCTCAAATAGAATTG+TGG 0.623663 2.3:-7864951 MS.gene42827:CDS
GAGTTGGATAAAGGAACCTG+TGG 0.624652 2.3:-7866552 MS.gene42827:CDS
CTGATAGAAGTGACTACTTG+TGG 0.624763 2.3:-7866469 MS.gene42827:CDS
GAATGAAGTGAAGCCAAAGA+GGG 0.625466 2.3:+7868638 None:intergenic
AGACAAACCTAAGCTTAATG+TGG 0.625480 2.3:-7866012 MS.gene42827:CDS
TTCTCTTGGTCCAAACCTAG+AGG 0.630553 2.3:-7867243 MS.gene42827:intron
AACTTTGACCGAAGTACTGG+CGG 0.630915 2.3:-7867594 MS.gene42827:CDS
CATGACCAACACAATTGTAG+TGG 0.637336 2.3:+7869502 None:intergenic
CAGTTGCGATTGACTTCACG+GGG 0.639490 2.3:-7865361 MS.gene42827:CDS
GGACTGAAAATTGGAGTGCA+TGG 0.640312 2.3:-7867953 MS.gene42827:intron
AACGATGTTATGCACCAATG+TGG 0.642318 2.3:-7869465 MS.gene42827:CDS
GGACACTTGAGGAACAGTGC+AGG 0.642369 2.3:+7864895 None:intergenic
TGGTCATTGATGGTAAACGT+AGG 0.643774 2.3:-7869424 MS.gene42827:CDS
TTTGTGCTGAATGGAACTAC+GGG 0.645930 2.3:-7868740 MS.gene42827:intron
AAGATGCTCACAGACCATGC+AGG 0.646255 2.3:+7866902 None:intergenic
TCATCCTTCGAAATACCCAC+AGG 0.647345 2.3:+7866536 None:intergenic
TCTTGCTGACACATGACCCA+AGG 0.647657 2.3:+7868201 None:intergenic
TGGTGCATAACATCGTTGGT+AGG 0.650577 2.3:+7869471 None:intergenic
CAAGCTATGGAACACCACTA+GGG 0.651106 2.3:-7864837 MS.gene42827:CDS
ATCAGATTTAGTGTCCACGT+TGG 0.651157 2.3:+7866961 None:intergenic
AAGTTTCCGCATGTCCCTAG+TGG 0.652981 2.3:+7864823 None:intergenic
TGCTGCCTTTCTCGCCAACG+TGG 0.653156 2.3:-7866975 MS.gene42827:CDS
GAACCAAGATACAGAATCAG+GGG 0.654289 2.3:-7864929 MS.gene42827:CDS
TCTATGATCATAATCCACAT+TGG 0.654567 2.3:+7869451 None:intergenic
GAGAAACTGTATGCACCACA+AGG 0.656950 2.3:-7868451 MS.gene42827:CDS
TGGATTTCCTCACAGACCTG+TGG 0.658765 2.3:-7867821 MS.gene42827:CDS
GCAAATGCGAGATCTTCCAC+AGG 0.659001 2.3:+7867805 None:intergenic
GGAACACCACTAGGGACATG+CGG 0.667083 2.3:-7864829 MS.gene42827:CDS
GGTGAAATTTGTGAAAGCAG+TGG 0.671103 2.3:-7868805 MS.gene42827:CDS
CAAGTAGTCACTTCTATCAG+CGG 0.678440 2.3:+7866472 None:intergenic
AAAATTATAGGTCCTCCTTG+TGG 0.680488 2.3:+7868436 None:intergenic
CATACCATACTCATCAATTG+GGG 0.683256 2.3:+7867539 None:intergenic
AGATCTTCCACAGGTCTGTG+AGG 0.697656 2.3:+7867814 None:intergenic
TCATCTTAAAGATTTGCACA+AGG 0.710585 2.3:-7867315 MS.gene42827:CDS
AGTTGGATAAAGGAACCTGT+GGG 0.713312 2.3:-7866551 MS.gene42827:CDS
ACAGACTCATGCAACTACAG+AGG 0.715275 2.3:-7865257 MS.gene42827:CDS
TCTTTGGCACTCCTCTACAA+GGG 0.721168 2.3:+7864195 None:intergenic
GTATTGTTTGAGGAAAGTGG+TGG 0.725658 2.3:-7865042 MS.gene42827:CDS
AAACCTGTGGAGTACTACGA+GGG 0.726385 2.3:+7869375 None:intergenic
CTGGTATGTCCACTTCCGAG+AGG 0.737350 2.3:+7865719 None:intergenic
AAAACCTGTGGAGTACTACG+AGG 0.750349 2.3:+7869374 None:intergenic
AAACTGTATGCACCACAAGG+AGG 0.755949 2.3:-7868448 MS.gene42827:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTATTTATATAAAAA+AGG + chr2.3:7865745-7865764 None:intergenic 0.0%
!! AATATGATAATATTACTTCA+CGG - chr2.3:7865961-7865980 MS.gene42827:CDS 15.0%
!! ATATTATTGATGAATTCTTA+GGG - chr2.3:7867605-7867624 MS.gene42827:CDS 15.0%
!! TACATTTCAAAATTACTATA+TGG - chr2.3:7865902-7865921 MS.gene42827:intron 15.0%
!! TATATGAAGAATAGAAATTA+CGG - chr2.3:7866254-7866273 MS.gene42827:intron 15.0%
!!! AATTTATGTGTATATTTTTC+TGG - chr2.3:7864951-7864970 MS.gene42827:CDS 15.0%
!!! ATATATTTTTCCAGATATTA+AGG - chr2.3:7865281-7865300 MS.gene42827:CDS 15.0%
!!! ATTTATGTGTATATTTTTCT+GGG - chr2.3:7864952-7864971 MS.gene42827:CDS 15.0%
!!! GTTTATATTGAAATTTTTGT+CGG - chr2.3:7866445-7866464 MS.gene42827:intron 15.0%
!! AAAACCTGAGATAAAATTAT+AGG + chr2.3:7865236-7865255 None:intergenic 20.0%
!! AAATTCCATAACTTATATCA+AGG + chr2.3:7868175-7868194 None:intergenic 20.0%
!! AAGCAACTTAATATAAATGA+AGG + chr2.3:7866828-7866847 None:intergenic 20.0%
!! AATTCCATAACTTATATCAA+GGG + chr2.3:7868174-7868193 None:intergenic 20.0%
!! ACTAAAATTATCTTATTGAC+AGG - chr2.3:7869384-7869403 MS.gene42827:CDS 20.0%
!! ATATGTTTCATTATCTATCT+TGG + chr2.3:7864673-7864692 None:intergenic 20.0%
!! GATATTATTGATGAATTCTT+AGG - chr2.3:7867604-7867623 MS.gene42827:CDS 20.0%
!!! AAAAAACATTTTTCATACAG+CGG + chr2.3:7868213-7868232 None:intergenic 20.0%
!!! AATTATTCACTAGGATTTTA+TGG - chr2.3:7867406-7867425 MS.gene42827:intron 20.0%
!!! CAATAGATTATGAACATTTT+TGG + chr2.3:7867543-7867562 None:intergenic 20.0%
!!! CTATTTATTAGTCTTAATGA+AGG - chr2.3:7867986-7868005 MS.gene42827:CDS 20.0%
!!! GATGATATATTTTCAAAAAC+TGG - chr2.3:7867139-7867158 MS.gene42827:intron 20.0%
!!! GTTAATTGTTTTTTGGTTTA+TGG - chr2.3:7865525-7865544 MS.gene42827:intron 20.0%
!!! TAATTTGTTATGTTTCACTT+TGG - chr2.3:7868934-7868953 MS.gene42827:intron 20.0%
!!! TTTATGTGTATATTTTTCTG+GGG - chr2.3:7864953-7864972 MS.gene42827:CDS 20.0%
!!! TTTTGTAACTAAAATTCATC+TGG - chr2.3:7866506-7866525 MS.gene42827:CDS 20.0%
! AACAATAGATTTCAGTATGA+AGG + chr2.3:7866152-7866171 None:intergenic 25.0%
! AATATCAGTTTATCCAAACA+TGG - chr2.3:7864739-7864758 MS.gene42827:intron 25.0%
! ATATTACTTCACGGAAAAAT+TGG - chr2.3:7865970-7865989 MS.gene42827:CDS 25.0%
! ATATTGAAAGGTTTGAAGAA+TGG - chr2.3:7867895-7867914 MS.gene42827:intron 25.0%
! CAAAGAATTCAAGTAAGATT+TGG + chr2.3:7865789-7865808 None:intergenic 25.0%
! CAAATCTTACTTGAATTCTT+TGG - chr2.3:7865787-7865806 MS.gene42827:CDS 25.0%
! CATCTTTAGATTTCTGAATA+AGG + chr2.3:7864404-7864423 None:intergenic 25.0%
! CTTAACTCATTGAAATGAAA+TGG - chr2.3:7864793-7864812 MS.gene42827:CDS 25.0%
! CTTATTCAGAAATCTAAAGA+TGG - chr2.3:7864402-7864421 MS.gene42827:intron 25.0%
! GAAACATAACAAATTAGCAA+GGG + chr2.3:7868930-7868949 None:intergenic 25.0%
! GATAAAACTGTAAATTTCAG+AGG - chr2.3:7866716-7866735 MS.gene42827:intron 25.0%
! GATTAACCTATCTATAAACA+GGG - chr2.3:7866929-7866948 MS.gene42827:CDS 25.0%
! TAAACTTTGACCTTAATATC+TGG + chr2.3:7865294-7865313 None:intergenic 25.0%
! TAAGCTATTCTATGCATAAT+TGG + chr2.3:7867764-7867783 None:intergenic 25.0%
! TGAAACATAACAAATTAGCA+AGG + chr2.3:7868931-7868950 None:intergenic 25.0%
! TGATTAACCTATCTATAAAC+AGG - chr2.3:7866928-7866947 MS.gene42827:CDS 25.0%
! TGGTAAATCATACATCAATT+GGG - chr2.3:7865398-7865417 MS.gene42827:intron 25.0%
! TTATTACATCCTACTTACTT+TGG + chr2.3:7866976-7866995 None:intergenic 25.0%
! TTTATTAGTCCAAAGTAAGT+AGG - chr2.3:7866964-7866983 MS.gene42827:CDS 25.0%
!! AATGGTAGGTATCTTTTATT+TGG - chr2.3:7865810-7865829 MS.gene42827:CDS 25.0%
!! TAAGATTTGATAACAGAGTT+TGG + chr2.3:7869152-7869171 None:intergenic 25.0%
!! TAATGAAGGTACATTGTTAA+TGG - chr2.3:7868000-7868019 MS.gene42827:CDS 25.0%
!! TAGAAACTTCAAGTTCAAAA+TGG - chr2.3:7867083-7867102 MS.gene42827:intron 25.0%
!! TTAAAAATAAGAGTTGATCG+TGG - chr2.3:7867478-7867497 MS.gene42827:intron 25.0%
!! TTAATTCTTTTGATACAGGT+CGG - chr2.3:7868025-7868044 MS.gene42827:intron 25.0%
!! TTTTCTATTGTTCAAGCATA+GGG + chr2.3:7869087-7869106 None:intergenic 25.0%
!! TTTTTGCAGTATGATTTTGA+TGG - chr2.3:7864817-7864836 MS.gene42827:CDS 25.0%
!!! AGATTATGAACATTTTTGGA+CGG + chr2.3:7867539-7867558 None:intergenic 25.0%
!!! TGTCTACGTTAATTGTTTTT+TGG - chr2.3:7865518-7865537 MS.gene42827:intron 25.0%
!!! TTTTGCAGTATGATTTTGAT+GGG - chr2.3:7864818-7864837 MS.gene42827:CDS 25.0%
!!! TTTTTGGTTTATGGTTTACT+AGG - chr2.3:7865534-7865553 MS.gene42827:intron 25.0%
AAAACACCCTGTTTATAGAT+AGG + chr2.3:7866938-7866957 None:intergenic 30.0%
AACTGACAATGAACCATTTA+AGG - chr2.3:7865058-7865077 MS.gene42827:CDS 30.0%
AACTTACATGAACCTGTTAA+AGG - chr2.3:7864459-7864478 MS.gene42827:intron 30.0%
AAGTACAGAATCATCTATCA+GGG + chr2.3:7867257-7867276 None:intergenic 30.0%
AATGCAATGCTCAAAGAAAA+TGG + chr2.3:7864524-7864543 None:intergenic 30.0%
ACATACCATACTCATCAATT+GGG + chr2.3:7866122-7866141 None:intergenic 30.0%
AGTCTTTCTAAGCTTATAGT+AGG + chr2.3:7864771-7864790 None:intergenic 30.0%
ATCTTGTAAGTTTCTTTCTC+TGG - chr2.3:7866536-7866555 MS.gene42827:CDS 30.0%
ATGAAGATTAATACCTGCAA+TGG - chr2.3:7865631-7865650 MS.gene42827:intron 30.0%
ATGTAAGTTCCAGAAAACAT+AGG + chr2.3:7864448-7864467 None:intergenic 30.0%
ATTCAGAAATCTAAAGATGG+AGG - chr2.3:7864405-7864424 MS.gene42827:intron 30.0%
CAAAACATGAAACTTACGAT+TGG + chr2.3:7865495-7865514 None:intergenic 30.0%
CTAAAACAAAGCCAAAAATG+TGG - chr2.3:7865683-7865702 MS.gene42827:intron 30.0%
CTGGTAAATCATACATCAAT+TGG - chr2.3:7865397-7865416 MS.gene42827:intron 30.0%
GAGATTACCTGATTATGATT+AGG + chr2.3:7868786-7868805 None:intergenic 30.0%
GCTTTCAACAATTAGCAATT+CGG + chr2.3:7864595-7864614 None:intergenic 30.0%
GTTTCCCTTGATATAAGTTA+TGG - chr2.3:7868167-7868186 MS.gene42827:intron 30.0%
TAAATGGTTCATTGTCAGTT+CGG + chr2.3:7865058-7865077 None:intergenic 30.0%
TAATGCAACATGTATGTCAT+TGG + chr2.3:7868244-7868263 None:intergenic 30.0%
TACAGTCTAAGTTGTACTTA+CGG - chr2.3:7869291-7869310 MS.gene42827:intron 30.0%
TAGTTTACTGATATGTGAGT+AGG - chr2.3:7868986-7869005 MS.gene42827:intron 30.0%
TATATGCTGCAGGAATTATT+AGG - chr2.3:7866305-7866324 MS.gene42827:CDS 30.0%
TCATCTTAAAGATTTGCACA+AGG - chr2.3:7866342-7866361 MS.gene42827:CDS 30.0%
TCCATTAAATTTGCAAGCTA+TGG - chr2.3:7868807-7868826 MS.gene42827:CDS 30.0%
TCTATGATCATAATCCACAT+TGG + chr2.3:7864209-7864228 None:intergenic 30.0%
TTAGATTTCTGAATAAGGTC+TGG + chr2.3:7864399-7864418 None:intergenic 30.0%
TTAGTATGTTACAACAACTC+TGG + chr2.3:7869369-7869388 None:intergenic 30.0%
TTCAAAATGGAGTTGGATAA+AGG - chr2.3:7867096-7867115 MS.gene42827:intron 30.0%
TTCAAACCTTTCAATATCAC+TGG + chr2.3:7867892-7867911 None:intergenic 30.0%
TTGAAACTCAAATGAAGTCA+AGG - chr2.3:7867439-7867458 MS.gene42827:intron 30.0%
! ACAATGAACCATTTAAGGTA+AGG - chr2.3:7865063-7865082 MS.gene42827:CDS 30.0%
! AGGACCTATAATTTTATCTC+AGG - chr2.3:7865229-7865248 MS.gene42827:CDS 30.0%
! ATACTAAGATTGCTCTTTTC+TGG + chr2.3:7865571-7865590 None:intergenic 30.0%
! ATGGTAATGAGAGAAATCAT+TGG + chr2.3:7867792-7867811 None:intergenic 30.0%
! CAAAAATGTGGACTGAAAAT+TGG - chr2.3:7865695-7865714 MS.gene42827:intron 30.0%
! CAATTTTCAGTCCACATTTT+TGG + chr2.3:7865697-7865716 None:intergenic 30.0%
! CTTACTTGAATTCTTTGGAA+TGG - chr2.3:7865792-7865811 MS.gene42827:CDS 30.0%
! GATTCATGTTAGCTTAGATA+TGG + chr2.3:7867811-7867830 None:intergenic 30.0%
! GGAGTTAATTCTTTTGATAC+AGG - chr2.3:7868021-7868040 MS.gene42827:CDS 30.0%
! GTTTTCTATTGTTCAAGCAT+AGG + chr2.3:7869088-7869107 None:intergenic 30.0%
! TCATAACTTGTAGCAATGAA+TGG + chr2.3:7866090-7866109 None:intergenic 30.0%
! TCATTGAAACCTATGTTTTC+TGG - chr2.3:7864436-7864455 MS.gene42827:intron 30.0%
! TCCATAGCTTGCAAATTTAA+TGG + chr2.3:7868811-7868830 None:intergenic 30.0%
! TCTTTTACTATTTAAACCGC+AGG - chr2.3:7866631-7866650 MS.gene42827:CDS 30.0%
!! TGACATTTGGTTTGAGTAAA+AGG + chr2.3:7868427-7868446 None:intergenic 30.0%
!! TTGTAAAGAAGGTGTTTATC+TGG - chr2.3:7868895-7868914 MS.gene42827:intron 30.0%
!!! ATCGTGGATTTTTTTTTCGA+GGG - chr2.3:7867494-7867513 MS.gene42827:intron 30.0%
!!! CAAATCTTAGTTTTTTCCGT+TGG - chr2.3:7869163-7869182 MS.gene42827:intron 30.0%
!!! TTTGGCTTTGTTTTAGAGTT+TGG + chr2.3:7865679-7865698 None:intergenic 30.0%
!!! TTTTTCCGTTGGTTTTAAAG+TGG - chr2.3:7869174-7869193 MS.gene42827:intron 30.0%
AAAATTATAGGTCCTCCTTG+TGG + chr2.3:7865224-7865243 None:intergenic 35.0%
AAAGAGAGACATAAAACCTG+TGG + chr2.3:7864298-7864317 None:intergenic 35.0%
AAAGCATGACTCAACAAGTT+TGG - chr2.3:7864610-7864629 MS.gene42827:intron 35.0%
AACACTTACAATGTCTGTGA+TGG + chr2.3:7868466-7868485 None:intergenic 35.0%
AAGACTGTTAAGACCTAATC+TGG + chr2.3:7866615-7866634 None:intergenic 35.0%
ACAGTCTAAGTTGTACTTAC+GGG - chr2.3:7869292-7869311 MS.gene42827:intron 35.0%
ACCAAATGTCACATGAATTG+TGG - chr2.3:7868436-7868455 MS.gene42827:CDS 35.0%
ACTACTTGTGGTACTCATTA+AGG - chr2.3:7867200-7867219 MS.gene42827:intron 35.0%
AGACAAACCTAAGCTTAATG+TGG - chr2.3:7867645-7867664 MS.gene42827:intron 35.0%
CAACACTCTTGTATTGTTTG+AGG - chr2.3:7868605-7868624 MS.gene42827:CDS 35.0%
CAAGTGTCCTAATCATAATC+AGG - chr2.3:7868776-7868795 MS.gene42827:CDS 35.0%
CAATGCAAAAACACACAAAC+AGG + chr2.3:7864324-7864343 None:intergenic 35.0%
CACAAACATATGGACCAATA+CGG + chr2.3:7864903-7864922 None:intergenic 35.0%
CATACCATACTCATCAATTG+GGG + chr2.3:7866121-7866140 None:intergenic 35.0%
CTTGACTAAAAACAGTACCA+TGG - chr2.3:7866033-7866052 MS.gene42827:CDS 35.0%
CTTGCAGGTAATTATTCACT+AGG - chr2.3:7867397-7867416 MS.gene42827:intron 35.0%
CTTGTATTGTTTGAGGAAAG+TGG - chr2.3:7868612-7868631 MS.gene42827:CDS 35.0%
GAAGGTTACCTTACCTTAAA+TGG + chr2.3:7865074-7865093 None:intergenic 35.0%
GAAGTACAGAATCATCTATC+AGG + chr2.3:7867258-7867277 None:intergenic 35.0%
GACATACCATACTCATCAAT+TGG + chr2.3:7866123-7866142 None:intergenic 35.0%
GATTATGATTAGGACACTTG+AGG + chr2.3:7868776-7868795 None:intergenic 35.0%
GATTTCAGTATGAAGGTTGA+AGG + chr2.3:7866145-7866164 None:intergenic 35.0%
GGATTATGATCATAGAGCAT+TGG - chr2.3:7864213-7864232 MS.gene42827:CDS 35.0%
GGGTATTCATGTCTAATTGA+GGG - chr2.3:7864973-7864992 MS.gene42827:CDS 35.0%
GTAATGAGAGAAATCATTGG+AGG + chr2.3:7867789-7867808 None:intergenic 35.0%
GTAGCAAAAGCTATTTGTGT+TGG + chr2.3:7868645-7868664 None:intergenic 35.0%
TAACAAATTAGCAAGGGAAC+AGG + chr2.3:7868924-7868943 None:intergenic 35.0%
TATAAACCACCTATACCTCT+AGG + chr2.3:7866432-7866451 None:intergenic 35.0%
TCATATGCACATCAGAACTA+TGG - chr2.3:7867829-7867848 MS.gene42827:CDS 35.0%
TCCACAATTCATGTGACATT+TGG + chr2.3:7868440-7868459 None:intergenic 35.0%
TGCCAGATTGAAAATGAGTA+TGG - chr2.3:7865348-7865367 MS.gene42827:CDS 35.0%
TGCTTCTTCACAAAGCTTTA+TGG + chr2.3:7866368-7866387 None:intergenic 35.0%
TGGTTCCACAATTCTATTTG+AGG + chr2.3:7868714-7868733 None:intergenic 35.0%
TGGTTTAGATCGACTATGTT+GGG - chr2.3:7868954-7868973 MS.gene42827:intron 35.0%
TGTAGGGACATTTGATATGT+TGG + chr2.3:7869265-7869284 None:intergenic 35.0%
TGTAGTGCTTAATACTGCAA+AGG - chr2.3:7866793-7866812 MS.gene42827:intron 35.0%
TTAGACTGTAAAACGCTGTA+GGG + chr2.3:7869281-7869300 None:intergenic 35.0%
TTCCACAATTCTATTTGAGG+TGG + chr2.3:7868711-7868730 None:intergenic 35.0%
TTCCATTCAGCACAAACATA+TGG + chr2.3:7864913-7864932 None:intergenic 35.0%
TTGGTTTAGATCGACTATGT+TGG - chr2.3:7868953-7868972 MS.gene42827:intron 35.0%
TTTACTATTTAAACCGCAGG+CGG - chr2.3:7866634-7866653 MS.gene42827:CDS 35.0%
TTTGTAGACGTAGACACAAT+TGG - chr2.3:7869126-7869145 MS.gene42827:intron 35.0%
! AAATCAACGGTTGGTTCTTA+GGG + chr2.3:7868117-7868136 None:intergenic 35.0%
! AACATCTTATTTCGCGTCTT+AGG - chr2.3:7866473-7866492 MS.gene42827:CDS 35.0%
! ATTTCTTTGCTATATGCTGC+AGG - chr2.3:7866295-7866314 MS.gene42827:CDS 35.0%
! CTCCATACTCATTTTCAATC+TGG + chr2.3:7865353-7865372 None:intergenic 35.0%
! CTTCAAGTTCAAAATGGAGT+TGG - chr2.3:7867089-7867108 MS.gene42827:intron 35.0%
! GACAAAAGCATGAAACACTA+GGG + chr2.3:7865098-7865117 None:intergenic 35.0%
! GACCTAAATCTTCACCTTTT+AGG + chr2.3:7868051-7868070 None:intergenic 35.0%
! GCATTTGAAGCAACATATGT+AGG + chr2.3:7868373-7868392 None:intergenic 35.0%
! GGAGTATCAACTGATACATT+TGG - chr2.3:7869436-7869455 MS.gene42827:CDS 35.0%
! TCCACAATTCTATTTGAGGT+GGG + chr2.3:7868710-7868729 None:intergenic 35.0%
! TGTTGCTGTTATTACAGATG+TGG - chr2.3:7864373-7864392 MS.gene42827:intron 35.0%
! TTTGCCACAACCACTATTTT+AGG - chr2.3:7866583-7866602 MS.gene42827:CDS 35.0%
! TTTGGTTTCAAAAACGATCG+TGG + chr2.3:7868582-7868601 None:intergenic 35.0%
! TTTTAGGCACTAACCAGATT+AGG - chr2.3:7866599-7866618 MS.gene42827:CDS 35.0%
!! AATACAAGAGTGTTGTCGTT+TGG + chr2.3:7868600-7868619 None:intergenic 35.0%
!! AGGTATCTTTTATTTGGTGG+TGG - chr2.3:7865816-7865835 MS.gene42827:CDS 35.0%
!! CTTGAATTCTTTGGAATGGT+AGG - chr2.3:7865796-7865815 MS.gene42827:CDS 35.0%
!! GCTAACCACTTTAAAACCAA+CGG + chr2.3:7869182-7869201 None:intergenic 35.0%
!! GGTAGGTATCTTTTATTTGG+TGG - chr2.3:7865813-7865832 MS.gene42827:CDS 35.0%
!! TCTTTAAGATGACTCCACTT+CGG + chr2.3:7866334-7866353 None:intergenic 35.0%
!! TTTCCAGAAAGTACTGTGAT+CGG + chr2.3:7867676-7867695 None:intergenic 35.0%
!!! ATGGAGCTTTTTTTGACACA+TGG - chr2.3:7867848-7867867 MS.gene42827:intron 35.0%
!!! CTTTTGAAGCGTTGATCTTA+AGG - chr2.3:7867300-7867319 MS.gene42827:CDS 35.0%
!!! GATCGTGGATTTTTTTTTCG+AGG - chr2.3:7867493-7867512 MS.gene42827:intron 35.0%
!!! GTTGGTTTTAAAGTGGTTAG+CGG - chr2.3:7869181-7869200 MS.gene42827:intron 35.0%
!!! TGGAGCTTTTTTTGACACAT+GGG - chr2.3:7867849-7867868 MS.gene42827:intron 35.0%
AAACGTAGGGTCTTGATTTC+TGG - chr2.3:7864247-7864266 MS.gene42827:CDS 40.0%
AACGATGTTATGCACCAATG+TGG - chr2.3:7864192-7864211 MS.gene42827:CDS 40.0%
AATTCTTAGGGAGTCAAACC+GGG - chr2.3:7867617-7867636 MS.gene42827:intron 40.0%
ACAAACTTTGATGCTCCATC+CGG - chr2.3:7868265-7868284 MS.gene42827:CDS 40.0%
ACAACTTCTTGATCCAATGC+AGG + chr2.3:7869410-7869429 None:intergenic 40.0%
ACAGAATCAGGGGAAAAAGT+AGG - chr2.3:7868738-7868757 MS.gene42827:intron 40.0%
ACATTGGTGCATAACATCGT+TGG + chr2.3:7864193-7864212 None:intergenic 40.0%
ACCCACCTCAAATAGAATTG+TGG - chr2.3:7868706-7868725 MS.gene42827:intron 40.0%
ACCTTTCAATATCACTGGAC+CGG + chr2.3:7867887-7867906 None:intergenic 40.0%
AGCACTACATTCTTGCAATC+TGG + chr2.3:7866782-7866801 None:intergenic 40.0%
AGTCAATCGCAACTGGATTA+CGG + chr2.3:7868291-7868310 None:intergenic 40.0%
AGTGCCTAAAATAGTGGTTG+TGG + chr2.3:7866590-7866609 None:intergenic 40.0%
AGTTGGATAAAGGAACCTGT+GGG - chr2.3:7867106-7867125 MS.gene42827:intron 40.0%
ATCAGATTTAGTGTCCACGT+TGG + chr2.3:7866699-7866718 None:intergenic 40.0%
ATCGCAGTAAAATCCATTGC+AGG + chr2.3:7865647-7865666 None:intergenic 40.0%
ATGGCTACATCTCTTGATAC+AGG - chr2.3:7865429-7865448 MS.gene42827:intron 40.0%
ATTCATATCACTTGCCTGCA+TGG - chr2.3:7866741-7866760 MS.gene42827:intron 40.0%
CAAATATCTTTCGAACGTGG+AGG + chr2.3:7867234-7867253 None:intergenic 40.0%
CAAGTAGTCACTTCTATCAG+CGG + chr2.3:7867188-7867207 None:intergenic 40.0%
CAGAATCAGGGGAAAAAGTA+GGG - chr2.3:7868739-7868758 MS.gene42827:intron 40.0%
CATCAATTGGGCAGCAAAAA+TGG - chr2.3:7865410-7865429 MS.gene42827:intron 40.0%
CATGACCAACACAATTGTAG+TGG + chr2.3:7864158-7864177 None:intergenic 40.0%
CATGAGATCGACAATCTTAG+CGG + chr2.3:7865180-7865199 None:intergenic 40.0%
CTATATGTGCATCTCCGTAT+TGG - chr2.3:7864886-7864905 MS.gene42827:CDS 40.0%
CTGATAGAAGTGACTACTTG+TGG - chr2.3:7867188-7867207 MS.gene42827:intron 40.0%
CTGGTTAGTGCCTAAAATAG+TGG + chr2.3:7866596-7866615 None:intergenic 40.0%
CTTAGACTGTAAAACGCTGT+AGG + chr2.3:7869282-7869301 None:intergenic 40.0%
CTTAGGTTTGTCTTTGTTCC+CGG + chr2.3:7867638-7867657 None:intergenic 40.0%
GAAAGCCACTACAATTGTGT+TGG - chr2.3:7864150-7864169 MS.gene42827:CDS 40.0%
GAAATGAAGCAAAGAGAACC+TGG + chr2.3:7864485-7864504 None:intergenic 40.0%
GAACCAAGATACAGAATCAG+GGG - chr2.3:7868728-7868747 MS.gene42827:intron 40.0%
GAACCCAAGATTACTTCTCT+TGG - chr2.3:7866400-7866419 MS.gene42827:intron 40.0%
GAACTTGTGAACAACGTTTC+AGG + chr2.3:7865936-7865955 None:intergenic 40.0%
GAAGATTTAGGTCTCTCTAG+TGG - chr2.3:7868058-7868077 MS.gene42827:intron 40.0%
GAATGAAGTGAAGCCAAAGA+GGG + chr2.3:7865022-7865041 None:intergenic 40.0%
GAATTCTTAGGGAGTCAAAC+CGG - chr2.3:7867616-7867635 MS.gene42827:intron 40.0%
GACTAAAAACAGTACCATGG+AGG - chr2.3:7866036-7866055 MS.gene42827:intron 40.0%
GAGTTTAACAGTTGGACTTC+AGG - chr2.3:7867714-7867733 MS.gene42827:intron 40.0%
GATCTGCTGAGTTTAACAGT+TGG - chr2.3:7867706-7867725 MS.gene42827:intron 40.0%
GCAAAATTGCACTCAATCCA+GGG + chr2.3:7866568-7866587 None:intergenic 40.0%
GCTTCAACAGCTAAACTCTT+TGG + chr2.3:7869481-7869500 None:intergenic 40.0%
GGAACCAAGATACAGAATCA+GGG - chr2.3:7868727-7868746 MS.gene42827:intron 40.0%
GGACCAAGAGAAGTAATCTT+GGG + chr2.3:7866406-7866425 None:intergenic 40.0%
GGATCAAGAAGTTGTAGTGT+TGG - chr2.3:7869415-7869434 MS.gene42827:CDS 40.0%
GGCAAGTGAACTCAGATTTA+AGG + chr2.3:7865120-7865139 None:intergenic 40.0%
GGCCTAAAAGGTGAAGATTT+AGG - chr2.3:7868046-7868065 MS.gene42827:intron 40.0%
GGCGATGTCAATTGTAAAGA+AGG - chr2.3:7868884-7868903 MS.gene42827:intron 40.0%
GGTGAAATTTGTGAAAGCAG+TGG - chr2.3:7864852-7864871 MS.gene42827:CDS 40.0%
GTACATGGTATCTGTGAGAT+GGG + chr2.3:7868560-7868579 None:intergenic 40.0%
GTATTGTTTGAGGAAAGTGG+TGG - chr2.3:7868615-7868634 MS.gene42827:CDS 40.0%
GTCCATATGTTTGTGCTGAA+TGG - chr2.3:7864908-7864927 MS.gene42827:CDS 40.0%
GTTGATCTTAAGGATGATCC+TGG - chr2.3:7867310-7867329 MS.gene42827:CDS 40.0%
GTTTGTGCTGAATGGAACTA+CGG - chr2.3:7864916-7864935 MS.gene42827:CDS 40.0%
TAAATCTGAGTTCACTTGCC+AGG - chr2.3:7865120-7865139 MS.gene42827:intron 40.0%
TACCAGTGTTGCATTTGTGA+CGG + chr2.3:7866185-7866204 None:intergenic 40.0%
TAGATCGACTATGTTGGGTA+TGG - chr2.3:7868959-7868978 MS.gene42827:intron 40.0%
TAGTAGGTCTAGACCATGTT+TGG + chr2.3:7864755-7864774 None:intergenic 40.0%
TCAAAAACGATCGTGGTACA+TGG + chr2.3:7868575-7868594 None:intergenic 40.0%
TCTTGATACAGGTGTTCCTT+GGG - chr2.3:7865440-7865459 MS.gene42827:intron 40.0%
TGAAGGAAAGTTTGAGAACC+AGG + chr2.3:7867331-7867350 None:intergenic 40.0%
TGATTTACCAGCAGAACCAT+AGG + chr2.3:7865388-7865407 None:intergenic 40.0%
TGCATTTGTTCATTGCTTGC+AGG - chr2.3:7864543-7864562 MS.gene42827:intron 40.0%
TGGAACCAAGATACAGAATC+AGG - chr2.3:7868726-7868745 MS.gene42827:intron 40.0%
TGGACCAAGAGAAGTAATCT+TGG + chr2.3:7866407-7866426 None:intergenic 40.0%
TGGGTAAATGGACAAAGCAT+TGG - chr2.3:7868337-7868356 MS.gene42827:intron 40.0%
TTCCTTCACATTGAATCGCT+CGG - chr2.3:7867343-7867362 MS.gene42827:CDS 40.0%
TTTCCCCTGATTCTGTATCT+TGG + chr2.3:7868734-7868753 None:intergenic 40.0%
TTTCGAGGGATAGTTGATCA+TGG - chr2.3:7867508-7867527 MS.gene42827:intron 40.0%
TTTGTGCTGAATGGAACTAC+GGG - chr2.3:7864917-7864936 MS.gene42827:CDS 40.0%
! CAAATCAACGGTTGGTTCTT+AGG + chr2.3:7868118-7868137 None:intergenic 40.0%
! CAATTGTGTTGGTCATGCTT+TGG - chr2.3:7864161-7864180 MS.gene42827:CDS 40.0%
! CTAAGAACCAACCGTTGATT+TGG - chr2.3:7868116-7868135 MS.gene42827:intron 40.0%
! GGACAAAAGCATGAAACACT+AGG + chr2.3:7865099-7865118 None:intergenic 40.0%
! GGGGTATTCATGTCTAATTG+AGG - chr2.3:7864972-7864991 MS.gene42827:CDS 40.0%
! GGGTAAATGGACAAAGCATT+GGG - chr2.3:7868338-7868357 MS.gene42827:intron 40.0%
! GGTCATTGATGGTAAACGTA+GGG - chr2.3:7864234-7864253 MS.gene42827:CDS 40.0%
! TCTTTCTCTGGAAAATTCCC+TGG - chr2.3:7866548-7866567 MS.gene42827:CDS 40.0%
! TGGTCATTGATGGTAAACGT+AGG - chr2.3:7864233-7864252 MS.gene42827:CDS 40.0%
! TTTGGCTTCACTTCATTCCA+GGG - chr2.3:7865024-7865043 MS.gene42827:CDS 40.0%
! TTTTGATGGGAGGAAGGATT+TGG - chr2.3:7864831-7864850 MS.gene42827:CDS 40.0%
!! ACGGAAAAATTGGCTCTAAG+AGG - chr2.3:7865980-7865999 MS.gene42827:CDS 40.0%
!! ATTGCTCTTTTCTGGAAGAC+AGG + chr2.3:7865563-7865582 None:intergenic 40.0%
!! CATAGAGCATTGGTCATTGA+TGG - chr2.3:7864223-7864242 MS.gene42827:CDS 40.0%
!! GTATGATTTTGATGGGAGGA+AGG - chr2.3:7864825-7864844 MS.gene42827:CDS 40.0%
!! TGCAGTATGATTTTGATGGG+AGG - chr2.3:7864821-7864840 MS.gene42827:CDS 40.0%
!! TTCCAGAAAGTACTGTGATC+GGG + chr2.3:7867675-7867694 None:intergenic 40.0%
!!! GGAGCTTTTTTTGACACATG+GGG - chr2.3:7867850-7867869 MS.gene42827:intron 40.0%
!!! TTTTTTTGACACATGGGGAG+CGG - chr2.3:7867855-7867874 MS.gene42827:intron 40.0%
AAACTGTATGCACCACAAGG+AGG - chr2.3:7865209-7865228 MS.gene42827:CDS 45.0%
AAAGGTGAGGCTTGGGTAAA+TGG - chr2.3:7868325-7868344 MS.gene42827:intron 45.0%
ACACACTATGTGCAGAGAAG+TGG - chr2.3:7869214-7869233 MS.gene42827:CDS 45.0%
ACACTCTTGATCTCTCCTCT+CGG - chr2.3:7867923-7867942 MS.gene42827:intron 45.0%
ACAGACTCATGCAACTACAG+AGG - chr2.3:7868400-7868419 MS.gene42827:intron 45.0%
ACATGAACCTGTTAAAGGCC+AGG - chr2.3:7864464-7864483 MS.gene42827:intron 45.0%
ACATGCGGAAACTTCTACCA+CGG - chr2.3:7868843-7868862 MS.gene42827:intron 45.0%
ACATTTGGAGACCCTTGTAG+AGG - chr2.3:7869451-7869470 MS.gene42827:CDS 45.0%
ACCAACTTTGACCGAAGTAC+TGG - chr2.3:7866060-7866079 MS.gene42827:intron 45.0%
ACCACCTATACCTCTAGGTT+TGG + chr2.3:7866427-7866446 None:intergenic 45.0%
ACCGGTCCAGTGATATTGAA+AGG - chr2.3:7867883-7867902 MS.gene42827:intron 45.0%
AGACTGTGAATTCCATCCTC+CGG + chr2.3:7868089-7868108 None:intergenic 45.0%
AGCATGAAACACTAGGGTGA+AGG + chr2.3:7865092-7865111 None:intergenic 45.0%
AGCGGTGAATCGCTTCATTT+CGG + chr2.3:7865162-7865181 None:intergenic 45.0%
ATCCCGATCACAGTACTTTC+TGG - chr2.3:7867670-7867689 MS.gene42827:intron 45.0%
ATTTGTGAAAGCAGTGGCTG+AGG - chr2.3:7864858-7864877 MS.gene42827:CDS 45.0%
CAAATGCACAGTGGTTGTAG+TGG + chr2.3:7869110-7869129 None:intergenic 45.0%
CAAGCTATGGAACACCACTA+GGG - chr2.3:7868820-7868839 MS.gene42827:CDS 45.0%
CAGGCGGCAATTTATAAGAC+AGG - chr2.3:7866650-7866669 MS.gene42827:intron 45.0%
CATTTGATATGTTGGAGCGC+AGG + chr2.3:7869257-7869276 None:intergenic 45.0%
CCTTGTACCAAATCAACGGT+TGG + chr2.3:7868126-7868145 None:intergenic 45.0%
CTACGTCTACAAATGCACAG+TGG + chr2.3:7869119-7869138 None:intergenic 45.0%
CTCTTGATACAGGTGTTCCT+TGG - chr2.3:7865439-7865458 MS.gene42827:intron 45.0%
GAATTATTAGGCAGCCGAAG+TGG - chr2.3:7866317-7866336 MS.gene42827:CDS 45.0%
GAGAAACTGTATGCACCACA+AGG - chr2.3:7865206-7865225 MS.gene42827:CDS 45.0%
GAGTTGGATAAAGGAACCTG+TGG - chr2.3:7867105-7867124 MS.gene42827:intron 45.0%
GATGCCCCAATTGATGAGTA+TGG - chr2.3:7866114-7866133 MS.gene42827:intron 45.0%
GCAGAGAAGTGGAGAATTGT+AGG - chr2.3:7869225-7869244 MS.gene42827:CDS 45.0%
GGAATGAAGTGAAGCCAAAG+AGG + chr2.3:7865023-7865042 None:intergenic 45.0%
GGACTGAAAATTGGAGTGCA+TGG - chr2.3:7865704-7865723 MS.gene42827:intron 45.0%
GGCAAAATTGCACTCAATCC+AGG + chr2.3:7866569-7866588 None:intergenic 45.0%
GGGATGTCCACATTAAGCTT+AGG + chr2.3:7867655-7867674 None:intergenic 45.0%
GGGCAAATATCTTTCGAACG+TGG + chr2.3:7867237-7867256 None:intergenic 45.0%
GGTACATGGTATCTGTGAGA+TGG + chr2.3:7868561-7868580 None:intergenic 45.0%
GGTCTCTCTAGTGGAAATTC+CGG - chr2.3:7868067-7868086 MS.gene42827:intron 45.0%
GTCTTATAAATTGCCGCCTG+CGG + chr2.3:7866650-7866669 None:intergenic 45.0%
GTTGCATGAGTCTGTGCAAT+CGG + chr2.3:7868395-7868414 None:intergenic 45.0%
TCAGTTCGGAACTTAATCCC+TGG + chr2.3:7865044-7865063 None:intergenic 45.0%
TCATCCTTCGAAATACCCAC+AGG + chr2.3:7867124-7867143 None:intergenic 45.0%
TCTTATTGACAGGCCTGCAT+TGG - chr2.3:7869394-7869413 MS.gene42827:CDS 45.0%
TCTTTGGCACTCCTCTACAA+GGG + chr2.3:7869465-7869484 None:intergenic 45.0%
TGCCAGGAAACTTTGTCTTC+AGG - chr2.3:7865136-7865155 MS.gene42827:intron 45.0%
TGGTGCATAACATCGTTGGT+AGG + chr2.3:7864189-7864208 None:intergenic 45.0%
TTCTCTTGGTCCAAACCTAG+AGG - chr2.3:7866414-7866433 MS.gene42827:intron 45.0%
TTGACAGTGGTTTCCCTCTT+TGG - chr2.3:7865006-7865025 MS.gene42827:CDS 45.0%
TTGATACAGGTCGGCCTAAA+AGG - chr2.3:7868034-7868053 MS.gene42827:intron 45.0%
! AAAACCTGTGGAGTACTACG+AGG + chr2.3:7864286-7864305 None:intergenic 45.0%
! AAACCTGTGGAGTACTACGA+GGG + chr2.3:7864285-7864304 None:intergenic 45.0%
! AAGAGAACCTGGCCTTTAAC+AGG + chr2.3:7864474-7864493 None:intergenic 45.0%
! CTTTGGCTTCACTTCATTCC+AGG - chr2.3:7865023-7865042 MS.gene42827:CDS 45.0%
! GGGCTTTAACTTCTTGACAG+TGG - chr2.3:7864993-7865012 MS.gene42827:CDS 45.0%
! TCCAAACCTAGAGGTATAGG+TGG - chr2.3:7866423-7866442 MS.gene42827:intron 45.0%
! TCCAGTTGCGATTGACTTCA+CGG - chr2.3:7868294-7868313 MS.gene42827:CDS 45.0%
! TGGTCCAAACCTAGAGGTAT+AGG - chr2.3:7866420-7866439 MS.gene42827:intron 45.0%
! TTTGAAATGTACCGCCTCGT+TGG + chr2.3:7865893-7865912 None:intergenic 45.0%
!! AACTTTGACCGAAGTACTGG+CGG - chr2.3:7866063-7866082 MS.gene42827:intron 45.0%
!! CCAACCGTTGATTTGGTACA+AGG - chr2.3:7868123-7868142 MS.gene42827:intron 45.0%
!!! TTTTTTGACACATGGGGAGC+GGG - chr2.3:7867856-7867875 MS.gene42827:intron 45.0%
!!! TAAAAATAACATTTTTATTA+TGG - chr2.3:7866993-7867012 MS.gene42827:CDS 5.0%
AAGATGCTCACAGACCATGC+AGG + chr2.3:7866758-7866777 None:intergenic 50.0%
AAGTTTCCGCATGTCCCTAG+TGG + chr2.3:7868837-7868856 None:intergenic 50.0%
AATCGCAACTGGATTACGGC+CGG + chr2.3:7868287-7868306 None:intergenic 50.0%
ACCAAAAGTGAAGACCGACC+TGG + chr2.3:7867960-7867979 None:intergenic 50.0%
AGATCTTCCACAGGTCTGTG+AGG + chr2.3:7865846-7865865 None:intergenic 50.0%
AGCCGTCACAAATGCAACAC+TGG - chr2.3:7866180-7866199 MS.gene42827:intron 50.0%
CTAGTGGAAATTCCGGAGGA+TGG - chr2.3:7868074-7868093 MS.gene42827:intron 50.0%
CTCTCTAGTGGAAATTCCGG+AGG - chr2.3:7868070-7868089 MS.gene42827:intron 50.0%
CTCTTTGGCACTCCTCTACA+AGG + chr2.3:7869466-7869485 None:intergenic 50.0%
GATGGGAAAAGGTGAGGCTT+GGG - chr2.3:7868318-7868337 MS.gene42827:intron 50.0%
GCAAATGCGAGATCTTCCAC+AGG + chr2.3:7865855-7865874 None:intergenic 50.0%
GCAAGCTATGGAACACCACT+AGG - chr2.3:7868819-7868838 MS.gene42827:CDS 50.0%
GCCAGTACTTCGGTCAAAGT+TGG + chr2.3:7866064-7866083 None:intergenic 50.0%
GCCCTTCATGCCTTCGTAAA+CGG - chr2.3:7867370-7867389 MS.gene42827:intron 50.0%
GGAACCTGTGGGTATTTCGA+AGG - chr2.3:7867117-7867136 MS.gene42827:intron 50.0%
GGCCTGAAGACAAAGTTTCC+TGG + chr2.3:7865141-7865160 None:intergenic 50.0%
TCTTGCTGACACATGACCCA+AGG + chr2.3:7865459-7865478 None:intergenic 50.0%
TGAATGGTCCGCCAGTACTT+CGG + chr2.3:7866074-7866093 None:intergenic 50.0%
TGGATTTCCTCACAGACCTG+TGG - chr2.3:7865836-7865855 MS.gene42827:intron 50.0%
TGTGAGTAGGTTGCTTGAGC+TGG - chr2.3:7868999-7869018 MS.gene42827:intron 50.0%
TTCGTAAACGGCAAGCTTGC+AGG - chr2.3:7867382-7867401 MS.gene42827:intron 50.0%
TTGATCTCTCCTCTCGGAAG+TGG - chr2.3:7867929-7867948 MS.gene42827:intron 50.0%
! ACCAGGTCGGTCTTCACTTT+TGG - chr2.3:7867956-7867975 MS.gene42827:CDS 50.0%
! CAGTTGCGATTGACTTCACG+GGG - chr2.3:7868296-7868315 MS.gene42827:CDS 50.0%
! CCAGTTGCGATTGACTTCAC+GGG - chr2.3:7868295-7868314 MS.gene42827:CDS 50.0%
! GATTCAGCCTATGGTTCTGC+TGG - chr2.3:7865378-7865397 MS.gene42827:CDS 50.0%
! GCCGTTTACGAAGGCATGAA+GGG + chr2.3:7867374-7867393 None:intergenic 50.0%
! GGTCAAAGTTGGTTCCTCCA+TGG + chr2.3:7866053-7866072 None:intergenic 50.0%
! TGCAAGCTTGCCGTTTACGA+AGG + chr2.3:7867383-7867402 None:intergenic 50.0%
! TGCCGTTTACGAAGGCATGA+AGG + chr2.3:7867375-7867394 None:intergenic 50.0%
! TTACGAAGGCATGAAGGGCA+TGG + chr2.3:7867369-7867388 None:intergenic 50.0%
! TTTTTGACACATGGGGAGCG+GGG - chr2.3:7867857-7867876 MS.gene42827:intron 50.0%
!! GACAAAGCATTGGGCGATAC+TGG - chr2.3:7868347-7868366 MS.gene42827:intron 50.0%
!! GGAGACATCGATTCAGCCTA+TGG - chr2.3:7865369-7865388 MS.gene42827:CDS 50.0%
AGTGTCCACGTTGGCGAGAA+AGG + chr2.3:7866690-7866709 None:intergenic 55.0%
CCCGTGAAGTCAATCGCAAC+TGG + chr2.3:7868298-7868317 None:intergenic 55.0%
CGGAAGTGGACATACCAGGT+CGG - chr2.3:7867943-7867962 MS.gene42827:intron 55.0%
CGGACGCTGCAGAAGCAATA+AGG - chr2.3:7868863-7868882 MS.gene42827:intron 55.0%
CTACCCTCGTAGTACTCCAC+AGG - chr2.3:7864279-7864298 MS.gene42827:intron 55.0%
CTCTCGGAAGTGGACATACC+AGG - chr2.3:7867939-7867958 MS.gene42827:intron 55.0%
CTGGTATGTCCACTTCCGAG+AGG + chr2.3:7867941-7867960 None:intergenic 55.0%
GACTTCACGGGGATGGGAAA+AGG - chr2.3:7868307-7868326 MS.gene42827:intron 55.0%
GGAACACCACTAGGGACATG+CGG - chr2.3:7868828-7868847 MS.gene42827:CDS 55.0%
GGACACTTGAGGAACAGTGC+AGG + chr2.3:7868765-7868784 None:intergenic 55.0%
GGATGGGAAAAGGTGAGGCT+TGG - chr2.3:7868317-7868336 MS.gene42827:intron 55.0%
GGCCGAGCGATTCAATGTGA+AGG + chr2.3:7867348-7867367 None:intergenic 55.0%
TATTGCTTCTGCAGCGTCCG+TGG + chr2.3:7868863-7868882 None:intergenic 55.0%
! GCGATTGACTTCACGGGGAT+GGG - chr2.3:7868301-7868320 MS.gene42827:CDS 55.0%
! TGCGATTGACTTCACGGGGA+TGG - chr2.3:7868300-7868319 MS.gene42827:CDS 55.0%
!!! GCACGCTTTTTCCAACGAGG+CGG - chr2.3:7865879-7865898 MS.gene42827:intron 55.0%
!!! GTCGCACGCTTTTTCCAACG+AGG - chr2.3:7865876-7865895 MS.gene42827:intron 55.0%
CACGGGGATGGGAAAAGGTG+AGG - chr2.3:7868312-7868331 MS.gene42827:intron 60.0%
GCAACTGGATTACGGCCGGA+TGG + chr2.3:7868283-7868302 None:intergenic 60.0%
GTGAAAGCAGTGGCTGAGGC+AGG - chr2.3:7864862-7864881 MS.gene42827:CDS 60.0%
TGCTGCCTTTCTCGCCAACG+TGG - chr2.3:7866682-7866701 MS.gene42827:intron 60.0%
ACATGGGGAGCGGGGATCAC+CGG - chr2.3:7867865-7867884 MS.gene42827:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 7864148 7869531 7864148 ID=MS.gene42827
chr2.3 mRNA 7864148 7869531 7864148 ID=MS.gene42827.t1;Parent=MS.gene42827
chr2.3 exon 7869379 7869531 7869379 ID=MS.gene42827.t1.exon1;Parent=MS.gene42827.t1
chr2.3 CDS 7869379 7869531 7869379 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7869194 7869289 7869194 ID=MS.gene42827.t1.exon2;Parent=MS.gene42827.t1
chr2.3 CDS 7869194 7869289 7869194 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7868741 7868853 7868741 ID=MS.gene42827.t1.exon3;Parent=MS.gene42827.t1
chr2.3 CDS 7868741 7868853 7868741 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7868600 7868666 7868600 ID=MS.gene42827.t1.exon4;Parent=MS.gene42827.t1
chr2.3 CDS 7868600 7868666 7868600 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7868429 7868521 7868429 ID=MS.gene42827.t1.exon5;Parent=MS.gene42827.t1
chr2.3 CDS 7868429 7868521 7868429 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7868182 7868325 7868182 ID=MS.gene42827.t1.exon6;Parent=MS.gene42827.t1
chr2.3 CDS 7868182 7868325 7868182 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7867954 7868042 7867954 ID=MS.gene42827.t1.exon7;Parent=MS.gene42827.t1
chr2.3 CDS 7867954 7868042 7867954 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7867756 7867861 7867756 ID=MS.gene42827.t1.exon8;Parent=MS.gene42827.t1
chr2.3 CDS 7867756 7867861 7867756 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7867544 7867631 7867544 ID=MS.gene42827.t1.exon9;Parent=MS.gene42827.t1
chr2.3 CDS 7867544 7867631 7867544 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7867244 7867362 7867244 ID=MS.gene42827.t1.exon10;Parent=MS.gene42827.t1
chr2.3 CDS 7867244 7867362 7867244 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7866865 7867026 7866865 ID=MS.gene42827.t1.exon11;Parent=MS.gene42827.t1
chr2.3 CDS 7866865 7867026 7866865 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7866458 7866660 7866458 ID=MS.gene42827.t1.exon12;Parent=MS.gene42827.t1
chr2.3 CDS 7866458 7866660 7866458 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7866276 7866370 7866276 ID=MS.gene42827.t1.exon13;Parent=MS.gene42827.t1
chr2.3 CDS 7866276 7866370 7866276 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7865944 7866053 7865944 ID=MS.gene42827.t1.exon14;Parent=MS.gene42827.t1
chr2.3 CDS 7865944 7866053 7865944 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7865719 7865835 7865719 ID=MS.gene42827.t1.exon15;Parent=MS.gene42827.t1
chr2.3 CDS 7865719 7865835 7865719 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7865535 7865636 7865535 ID=MS.gene42827.t1.exon16;Parent=MS.gene42827.t1
chr2.3 CDS 7865535 7865636 7865535 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7865203 7865414 7865203 ID=MS.gene42827.t1.exon17;Parent=MS.gene42827.t1
chr2.3 CDS 7865203 7865414 7865203 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7864774 7865110 7864774 ID=MS.gene42827.t1.exon18;Parent=MS.gene42827.t1
chr2.3 CDS 7864774 7865110 7864774 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
chr2.3 exon 7864148 7864273 7864148 ID=MS.gene42827.t1.exon19;Parent=MS.gene42827.t1
chr2.3 CDS 7864148 7864273 7864148 ID=cds.MS.gene42827.t1;Parent=MS.gene42827.t1
Gene Sequence

>MS.gene42827

ATGAAAGCCACTACAATTGTGTTGGTCATGCTTTGGTTCCTACCAACGATGTTATGCACCAATGTGGATTATGATCATAGAGCATTGGTCATTGATGGTAAACGTAGGGTCTTGATTTCTGGTTCTATACACTACCCTCGTAGTACTCCACAGGTTTTATGTCTCTCTTTCATCCTGTTTGTGTGTTTTTGCATTGTATTTGATTTTAAACAGTGTTGAATTTGTTGTTGCTGTTATTACAGATGTGGCCAGACCTTATTCAGAAATCTAAAGATGGAGGACTTGATGTCATTGAAACCTATGTTTTCTGGAACTTACATGAACCTGTTAAAGGCCAGGTTCTCTTTGCTTCATTTCTTCTCTCACATTCTTACCATTTTCTTTGAGCATTGCATTGCATTTGTTCATTGCTTGCAGGAAAAGAAAACAAATGTCTATGTTAAGCCGAATTGCTAATTGTTGAAAGCATGACTCAACAAGTTTGGATTGACTTATTTGAGTTTATCTACTGACATAATATCTCCAAGATAGATAATGAAACATATTAATTATATGAAAACAATATGACTTTGTTTTATCTTTTGTAAATAGAATATCAGTTTATCCAAACATGGTCTAGACCTACTATAAGCTTAGAAAGACTATCTTAACTCATTGAAATGAAATGGATTTTTGCAGTATGATTTTGATGGGAGGAAGGATTTGGTGAAATTTGTGAAAGCAGTGGCTGAGGCAGGTCTATATGTGCATCTCCGTATTGGTCCATATGTTTGTGCTGAATGGAACTACGGGTAAAGTTTTGTAATTTATGTGTATATTTTTCTGGGGTATTCATGTCTAATTGAGGGCTTTAACTTCTTGACAGTGGTTTCCCTCTTTGGCTTCACTTCATTCCAGGGATTAAGTTCCGAACTGACAATGAACCATTTAAGGTAAGGTAACCTTCACCCTAGTGTTTCATGCTTTTGTCCTTAAATCTGAGTTCACTTGCCAGGAAACTTTGTCTTCAGGCCGAAATGAAGCGATTCACCGCTAAGATTGTCGATCTCATGAAGCAAGAGAAACTGTATGCACCACAAGGAGGACCTATAATTTTATCTCAGGTTTTTTATCATTGAATACAAGTATAGTGAATATATTTTTCCAGATATTAAGGTCAAAGTTTATATTTGTTAATGTGAGAGTATTTGTGCTTTCTAATGCCAGATTGAAAATGAGTATGGAGACATCGATTCAGCCTATGGTTCTGCTGGTAAATCATACATCAATTGGGCAGCAAAAATGGCTACATCTCTTGATACAGGTGTTCCTTGGGTCATGTGTCAGCAAGAAGATGCTTCTGATCCAATCGTAAGTTTCATGTTTTGATATGTCTACGTTAATTGTTTTTTGGTTTATGGTTTACTAGGTTGCCTGTCTTCCAGAAAAGAGCAATCTTAGTATGCTGTTTGCATTCATCTTACTCGATTTTTACTTGAACTGCATGAAGATTAATACCTGCAATGGATTTTACTGCGATCAATTCACACCAAACTCTAAAACAAAGCCAAAAATGTGGACTGAAAATTGGAGTGCATGGTTAGCAACTTAGCATCCTTTTTTATATAAATAATTTAATCGAATTGTTTTTGTTATTTTCCAAATCTTACTTGAATTCTTTGGAATGGTAGGTATCTTTTATTTGGTGGTGGATTTCCTCACAGACCTGTGGAAGATCTCGCATTTGCTGTCGCACGCTTTTTCCAACGAGGCGGTACATTTCAAAATTACTATATGGTATTGCAACCTGAAACGTTGTTCACAAGTTCAATTTAATATGATAATATTACTTCACGGAAAAATTGGCTCTAAGAGGAATTAGCTGATACTGTATCATTTTTCATTGCTTGACTAAAAACAGTACCATGGAGGAACCAACTTTGACCGAAGTACTGGCGGACCATTCATTGCTACAAGTTATGATTTTGATGCCCCAATTGATGAGTATGGTATGTCCTTCAACCTTCATACTGAAATCTATTGTTCATGTTGTAGCCGTCACAAATGCAACACTGGTAATACATCAAAGAAGATAAATTAATAGTATCACATGCATAGTTTATTTCTTATATGAAGAATAGAAATTACGGACAATTTTGTACTTTTTAATTTCTTTGCTATATGCTGCAGGAATTATTAGGCAGCCGAAGTGGAGTCATCTTAAAGATTTGCACAAGGCCATAAAGCTTTGTGAAGAAGCATTAATAGCTACAGAACCCAAGATTACTTCTCTTGGTCCAAACCTAGAGGTATAGGTGGTTTATATTGAAATTTTTGTCGGTTTGAAACATCTTATTTCGCGTCTTAGGATAGAATATATTTTGTAACTAAAATTCATCTGGTTTGTCAATCTTGTAAGTTTCTTTCTCTGGAAAATTCCCTGGATTGAGTGCAATTTTGCCACAACCACTATTTTAGGCACTAACCAGATTAGGTCTTAACAGTCTTTTACTATTTAAACCGCAGGCGGCAATTTATAAGACAGGATCTGTATGTGCTGCCTTTCTCGCCAACGTGGACACTAAATCTGATAAAACTGTAAATTTCAGAGGCAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGATTGCAAGAATGTAGTGCTTAATACTGCAAAGGTTTGTCTTGCCTTCATTTATATTAAGTTGCTTCAATAACTACGATTATCGCAATCAAAATAGATAGTTTAATTCAATAGAGTTGCTAAAAAGTGTGATTATTATTCATTGTGTGATTAACCTATCTATAAACAGGGTGTTTTCTCTTATTTATTAGTCCAAAGTAAGTAGGATGTAATAAAAATAACATTTTTATTATGGCAGATTAATTCTGCATCTGTGATTTCAAACTTCGTAACTGAATCTTCAAAAGAAGATATCAGTTCTTTAGAAACTTCAAGTTCAAAATGGAGTTGGATAAAGGAACCTGTGGGTATTTCGAAGGATGATATATTTTCAAAAACTGGATTACTTGAGCAAATAAATATCACCGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGGTACACGAGCCTCCACGTTCGAAAGATATTTGCCCTGATAGATGATTCTGTACTTCTTGATAACACTTCTATTGTATTCTTTTGAAGCGTTGATCTTAAGGATGATCCTGGTTCTCAAACTTTCCTTCACATTGAATCGCTCGGCCATGCCCTTCATGCCTTCGTAAACGGCAAGCTTGCAGGTAATTATTCACTAGGATTTTATGGTTTTTATATTTTGAAACTCAAATGAAGTCAAGGTTGATTTTAAAACACGTTAAAAATAAGAGTTGATCGTGGATTTTTTTTTCGAGGGATAGTTGATCATGGATGTTCCGTCCAAAAATGTTCATAATCTATTGTTTCAATTAAGTTCTTGAATTATTAAATAATAACTTTCTATGATATTATTGATGAATTCTTAGGGAGTCAAACCGGGAACAAAGACAAACCTAAGCTTAATGTGGACATCCCGATCACAGTACTTTCTGGAAAGAATAAAATTGATCTGCTGAGTTTAACAGTTGGACTTCAGGTTCAGCTTTTCTTGTTTTTAGTTTCCAATTATGCATAGAATAGCTTAGTCCTCCAATGATTTCTCTCATTACCATATCTAAGCTAACATGAATCATATGCACATCAGAACTATGGAGCTTTTTTTGACACATGGGGAGCGGGGATCACCGGTCCAGTGATATTGAAAGGTTTGAAGAATGGCAACAACACTCTTGATCTCTCCTCTCGGAAGTGGACATACCAGGTCGGTCTTCACTTTTGGTCGAAGACTATTTATTAGTCTTAATGAAGGTACATTGTTAATGGAGTTAATTCTTTTGATACAGGTCGGCCTAAAAGGTGAAGATTTAGGTCTCTCTAGTGGAAATTCCGGAGGATGGAATTCACAGTCTACTTTCCCTAAGAACCAACCGTTGATTTGGTACAAGGTAATTTTATTTTCAATTTATTGTTTCCCTTGATATAAGTTATGGAATTTCAATAAAAAAGAATGCCGCTGTATGAAAAATGTTTTTTGCTACTAACCAATGACATACATGTTGCATTAGACAAACTTTGATGCTCCATCCGGCCGTAATCCAGTTGCGATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGGCGATACTGGCCTACATATGTTGCTTCAAATGCCGATTGCACAGACTCATGCAACTACAGAGGACCTTTTACTCAAACCAAATGTCACATGAATTGTGGAAAACCATCACAGACATTGTAAGTGTTGCAAATTTTCAATGAAATAGAGCATAAACATGAAAAAAAATCTTGATCTATGATGTGACTGAGACATTAATCCCATCTCACAGATACCATGTACCACGATCGTTTTTGAAACCAAACGACAACACTCTTGTATTGTTTGAGGAAAGTGGTGGTGATCCAACACAAATAGCTTTTGCTACAAAACAGCTAGAAAGTTTGTGTGCACATGTATCTGATTCTCACCCACCTCAAATAGAATTGTGGAACCAAGATACAGAATCAGGGGAAAAAGTAGGGCCTGCACTGTTCCTCAAGTGTCCTAATCATAATCAGGTAATCTCTTCCATTAAATTTGCAAGCTATGGAACACCACTAGGGACATGCGGAAACTTCTACCACGGACGCTGCAGAAGCAATAAGGCGATGTCAATTGTAAAGAAGGTGTTTATCTGGATTCCTGTTCCCTTGCTAATTTGTTATGTTTCACTTTGGTTTAGATCGACTATGTTGGGTATGGCTCATAGTTTACTGATATGTGAGTAGGTTGCTTGAGCTGGTGTGAATAATAGAAAATCAACTAATCAACTAATAGTATTTAAACACAAGCACTAATATGTAACCCTATGCTTGAACAATAGAAAACCACTACAACCACTGTGCATTTGTAGACGTAGACACAATTGGCCAAACTCTGTTATCAAATCTTAGTTTTTTCCGTTGGTTTTAAAGTGGTTAGCGGCGAAACTCATACACACTATGTGCAGAGAAGTGGAGAATTGTAGGTTCAAACCTGCGCTCCAACATATCAAATGTCCCTACAGCGTTTTACAGTCTAAGTTGTACTTACGGGACAATCTTTTGTGTTATTTGTTTGTGTTTTTCATATATGTTTTCTTTTGAACCAGAGTTGTTGTAACATACTAAAATTATCTTATTGACAGGCCTGCATTGGATCAAGAAGTTGTAGTGTTGGAGTATCAACTGATACATTTGGAGACCCTTGTAGAGGAGTGCCAAAGAGTTTAGCTGTTGAAGCTACTTGTGCTTATAGCCATACAGACATGTAA
Protein sequence

>MS.gene42827.t1

MKATTIVLVMLWFLPTMLCTNVDYDHRALVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNLHEPVKGQYDFDGRKDLVKFVKAVAEAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDLMKQEKLYAPQGGPIILSQIENEYGDIDSAYGSAGKSYINWAAKMATSLDTGVPWVMCQQEDASDPIINTCNGFYCDQFTPNSKTKPKMWTENWSAWYLLFGGGFPHRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRSTGGPFIATSYDFDAPIDEYGIIRQPKWSHLKDLHKAIKLCEEALIATEPKITSLGPNLEAAIYKTGSVCAAFLANVDTKSDKTVNFRGNSYHLPAWSVSILPDCKNVVLNTAKINSASVISNFVTESSKEDISSLETSSSKWSWIKEPVGISKDDIFSKTGLLEQINITADRSDYLWYSLSVDLKDDPGSQTFLHIESLGHALHAFVNGKLAGSQTGNKDKPKLNVDIPITVLSGKNKIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGNNTLDLSSRKWTYQVGLKGEDLGLSSGNSGGWNSQSTFPKNQPLIWYKTNFDAPSGRNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVASNADCTDSCNYRGPFTQTKCHMNCGKPSQTLYHVPRSFLKPNDNTLVLFEESGGDPTQIAFATKQLESLCAHVSDSHPPQIELWNQDTESGEKVGPALFLKCPNHNQVISSIKFASYGTPLGTCGNFYHGRCRSNKAMSIVKKACIGSRSCSVGVSTDTFGDPCRGVPKSLAVEATCAYSHTDM