Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43414.t1 | XP_003610594.2 | 85.6 | 564 | 81 | 0 | 1 | 564 | 9 | 572 | 2.50E-246 | 861.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43414.t1 | Q8GYX3 | 47.6 | 544 | 226 | 6 | 18 | 553 | 6 | 498 | 4.2e-109 | 396.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43414.t1 | G7JMW8 | 85.6 | 564 | 81 | 0 | 1 | 564 | 1 | 564 | 1.8e-246 | 861.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051368 | MS.gene43414 | 0.801599 | 8.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43414.t1 | MTR_4g133890 | 92.908 | 564 | 40 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1016 |
| MS.gene43414.t1 | MTR_4g133890 | 92.692 | 561 | 41 | 0 | 1 | 561 | 9 | 569 | 0.0 | 1006 |
| MS.gene43414.t1 | MTR_2g026590 | 67.082 | 562 | 161 | 4 | 10 | 563 | 5 | 550 | 0.0 | 693 |
| MS.gene43414.t1 | MTR_8g105350 | 49.159 | 535 | 245 | 8 | 17 | 542 | 56 | 572 | 3.11e-151 | 448 |
| MS.gene43414.t1 | MTR_1g032520 | 48.684 | 532 | 252 | 5 | 17 | 542 | 51 | 567 | 1.14e-148 | 441 |
| MS.gene43414.t1 | MTR_8g021120 | 50.187 | 534 | 239 | 10 | 17 | 542 | 52 | 566 | 7.13e-147 | 436 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43414.t1 | AT4G17220 | 53.125 | 544 | 196 | 6 | 18 | 553 | 6 | 498 | 1.33e-170 | 494 |
| MS.gene43414.t1 | AT1G68060 | 48.727 | 550 | 256 | 9 | 17 | 557 | 65 | 597 | 3.64e-158 | 466 |
| MS.gene43414.t1 | AT1G24764 | 48.790 | 537 | 246 | 9 | 17 | 542 | 73 | 591 | 3.07e-156 | 461 |
| MS.gene43414.t1 | AT1G14840 | 48.790 | 537 | 242 | 7 | 17 | 542 | 48 | 562 | 5.14e-155 | 457 |
| MS.gene43414.t1 | AT1G24764 | 48.790 | 537 | 246 | 9 | 17 | 542 | 132 | 650 | 1.56e-154 | 459 |
| MS.gene43414.t1 | AT2G01750 | 47.495 | 539 | 245 | 7 | 17 | 542 | 72 | 585 | 1.58e-151 | 449 |
| MS.gene43414.t1 | AT2G01750 | 46.512 | 559 | 258 | 8 | 17 | 559 | 72 | 605 | 2.44e-151 | 449 |
| MS.gene43414.t1 | AT1G14840 | 46.555 | 537 | 239 | 8 | 17 | 542 | 48 | 547 | 4.92e-140 | 418 |
| MS.gene43414.t1 | AT1G24764 | 48.904 | 456 | 204 | 9 | 98 | 542 | 1 | 438 | 7.70e-130 | 388 |
Find 96 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGAGATTTCTCTAAAATTT+TGG | 0.168689 | 8.4:+1006313 | None:intergenic |
| ATATTTGTCTGTTGAAATAA+AGG | 0.235016 | 8.4:+1005116 | None:intergenic |
| AGCTTGCAAACTACTGTCTT+TGG | 0.271121 | 8.4:+1004752 | None:intergenic |
| TAATTAAAATACCTCTTCTA+TGG | 0.278017 | 8.4:+1007597 | None:intergenic |
| TTTCAACTTCAAGAATCTTT+TGG | 0.283060 | 8.4:+1006288 | None:intergenic |
| TGGACCACCACTTGCTGTTC+GGG | 0.284359 | 8.4:+1005184 | None:intergenic |
| AAAGCTTAGCCAAACTATTC+AGG | 0.293484 | 8.4:-1006267 | MS.gene43414:CDS |
| GAACAGAATCGTCATCCTTT+TGG | 0.300614 | 8.4:+1006778 | None:intergenic |
| GCAATTCAGAAACTTGTCTT+TGG | 0.311316 | 8.4:+1006189 | None:intergenic |
| CCTCAAGTTCCTGAATAGTT+TGG | 0.312176 | 8.4:+1006258 | None:intergenic |
| AGCTAAAGATGAAGAAATTA+TGG | 0.313202 | 8.4:-1004733 | MS.gene43414:intron |
| TTCACCATTTGCAATTCTAT+TGG | 0.325874 | 8.4:+1006025 | None:intergenic |
| TTCATAGATAACAGCACTTC+AGG | 0.334892 | 8.4:-1006595 | MS.gene43414:intron |
| AGTCATTTGGTTTCTTGCTT+TGG | 0.339262 | 8.4:+1004856 | None:intergenic |
| TTGGACCACCACTTGCTGTT+CGG | 0.348999 | 8.4:+1005183 | None:intergenic |
| TGCAGTGACGATTTGGTGTC+AGG | 0.351949 | 8.4:-1004831 | MS.gene43414:CDS |
| GTTCGGGAACTTATGATGTT+AGG | 0.366965 | 8.4:+1005200 | None:intergenic |
| CAACCAAGAGCATCTGCTAT+TGG | 0.377463 | 8.4:-1005143 | MS.gene43414:CDS |
| ACATGTTGAAGAAAAGGATA+TGG | 0.378577 | 8.4:-1005016 | MS.gene43414:CDS |
| GAGAAATGAAGTCGGTAAAC+TGG | 0.378705 | 8.4:-1007318 | MS.gene43414:CDS |
| CCGCAGAAGCAACACTTAGA+AGG | 0.382381 | 8.4:-1006812 | MS.gene43414:CDS |
| TCTTCTAGCCATTGCTTGAC+AGG | 0.383618 | 8.4:+1005966 | None:intergenic |
| AAAACAACACAAACACTGTT+GGG | 0.389131 | 8.4:-1005091 | MS.gene43414:CDS |
| TAAACAAAGAACCTTTGAAT+TGG | 0.391122 | 8.4:+1008331 | None:intergenic |
| CTTCACTTTCAGCATTGAAC+TGG | 0.402094 | 8.4:+1004919 | None:intergenic |
| TTTCTTCCACTCTACTTCCA+TGG | 0.416424 | 8.4:+1004284 | None:intergenic |
| TATTTGTCTGTTGAAATAAA+GGG | 0.417797 | 8.4:+1005117 | None:intergenic |
| CGGAAAACATGTTGAAGAAA+AGG | 0.427179 | 8.4:-1005022 | MS.gene43414:CDS |
| CCACTCTACTTCCATGGACT+TGG | 0.429401 | 8.4:+1004290 | None:intergenic |
| GCTAGCAAGGGTAAAAGTTT+CGG | 0.430627 | 8.4:-1006048 | MS.gene43414:CDS |
| TCGTCACTGCACGAGTCATT+TGG | 0.432134 | 8.4:+1004843 | None:intergenic |
| GGGGCAATGGCGTTATCAAT+TGG | 0.440234 | 8.4:+1006756 | None:intergenic |
| TGAAAAGGAAAATGAGATAC+AGG | 0.451771 | 8.4:-1004964 | MS.gene43414:CDS |
| AGTTGCTGATAGTGGTGAAA+AGG | 0.454137 | 8.4:-1004979 | MS.gene43414:CDS |
| ATAGGGTCTGAGAGGACAAC+TGG | 0.454257 | 8.4:+1008381 | None:intergenic |
| GTGAGGTGTGAAAAGCAATA+TGG | 0.458438 | 8.4:-1008414 | MS.gene43414:CDS |
| TGACTCGTGCAGTGACGATT+TGG | 0.459803 | 8.4:-1004838 | MS.gene43414:CDS |
| AAGCTGAGATTACAATGTAT+AGG | 0.477680 | 8.4:-1006728 | MS.gene43414:CDS |
| CTTCAGCTGTGATTCTGCCT+TGG | 0.478370 | 8.4:+1005372 | None:intergenic |
| CACTAGAGAGGGAGCTAGCA+AGG | 0.481581 | 8.4:-1006061 | MS.gene43414:CDS |
| CTTCCAATAGCAGATGCTCT+TGG | 0.493116 | 8.4:+1005140 | None:intergenic |
| AGAGGATCGTCTTAAGCAAA+AGG | 0.497139 | 8.4:-1007276 | MS.gene43414:intron |
| CCTCTCAGACCCTATGGTGT+TGG | 0.497422 | 8.4:-1008373 | MS.gene43414:CDS |
| ATAAGTAAAGTTGCTGATAG+TGG | 0.498402 | 8.4:-1004987 | MS.gene43414:CDS |
| AGATGCAGCTGCTAGAGAAA+AGG | 0.499613 | 8.4:-1004253 | MS.gene43414:CDS |
| CGATTAATCTCCAACACCAT+AGG | 0.511794 | 8.4:+1008363 | None:intergenic |
| AGTTGTCCTCTCAGACCCTA+TGG | 0.511922 | 8.4:-1008379 | MS.gene43414:CDS |
| GACTGAAGCTCTGAAGGATA+AGG | 0.515576 | 8.4:-1007620 | MS.gene43414:CDS |
| CGTTTGCATAACCAATTCAA+AGG | 0.519141 | 8.4:-1008342 | MS.gene43414:intron |
| CTCAGCTTGAAGAGGGGCAA+TGG | 0.525958 | 8.4:+1006743 | None:intergenic |
| TTGTAATCTCAGCTTGAAGA+GGG | 0.530115 | 8.4:+1006736 | None:intergenic |
| CCAAACTATTCAGGAACTTG+AGG | 0.536454 | 8.4:-1006258 | MS.gene43414:CDS |
| AAGGGTGCATGCAAACCAAA+AGG | 0.538099 | 8.4:-1006793 | MS.gene43414:CDS |
| TTTGCAAAGTGCACTAGAGA+AGG | 0.539870 | 8.4:-1006505 | MS.gene43414:CDS |
| CCTTCTAAGTGTTGCTTCTG+CGG | 0.541428 | 8.4:+1006812 | None:intergenic |
| CGCAGAAGCAACACTTAGAA+GGG | 0.542238 | 8.4:-1006811 | MS.gene43414:CDS |
| GAAACACAGACTCCTCCAAA+AGG | 0.543913 | 8.4:-1004188 | MS.gene43414:intron |
| TCGGCCAATAGAATTGCAAA+TGG | 0.544219 | 8.4:-1006029 | MS.gene43414:CDS |
| TGATGCACTGACCAAGTCCA+TGG | 0.550345 | 8.4:-1004301 | MS.gene43414:CDS |
| AAAGAGAGGTCATTAAATTG+AGG | 0.563049 | 8.4:-1004788 | MS.gene43414:CDS |
| AAACAACACAAACACTGTTG+GGG | 0.563286 | 8.4:-1005090 | MS.gene43414:CDS |
| GATTAATCTCCAACACCATA+GGG | 0.563826 | 8.4:+1008364 | None:intergenic |
| AGAAGAGAGAAGGATTATGC+AGG | 0.567503 | 8.4:-1005949 | MS.gene43414:intron |
| AAGGTCGACTGAAGCTCTGA+AGG | 0.573607 | 8.4:-1007626 | MS.gene43414:CDS |
| AGCAATGGCTAGAAGAGAGA+AGG | 0.577331 | 8.4:-1005959 | MS.gene43414:CDS |
| CAAGGCAGAATCACAGCTGA+AGG | 0.578308 | 8.4:-1005371 | MS.gene43414:intron |
| AAATGTAGACAGAGATGCAA+AGG | 0.598221 | 8.4:-1005429 | MS.gene43414:intron |
| GAGGAAGTCATCTTAGCTAA+CGG | 0.600860 | 8.4:-1006239 | MS.gene43414:CDS |
| GATTACAATGTATAGGAATG+AGG | 0.604046 | 8.4:-1006721 | MS.gene43414:intron |
| AGGTCATGCCTGTCAAGCAA+TGG | 0.604618 | 8.4:-1005974 | MS.gene43414:CDS |
| ATGAGAAAAGGACACTAGAG+AGG | 0.607096 | 8.4:-1006073 | MS.gene43414:CDS |
| GTATGATAGGCTGCAAAGAG+AGG | 0.608475 | 8.4:-1004802 | MS.gene43414:CDS |
| CCAAGTCCATGGAAGTAGAG+TGG | 0.610186 | 8.4:-1004290 | MS.gene43414:CDS |
| ACTAGAGAGGGAGCTAGCAA+GGG | 0.615439 | 8.4:-1006060 | MS.gene43414:CDS |
| TAAAATGAAGTATACTTCTG+CGG | 0.618529 | 8.4:-1005042 | MS.gene43414:CDS |
| CGAGAGACTTAGAGTTACAG+AGG | 0.619933 | 8.4:-1007294 | MS.gene43414:CDS |
| AGAGTGAAATCAAAGCACTA+AGG | 0.626155 | 8.4:-1007645 | MS.gene43414:CDS |
| GAAGGATAAGGCCATAGAAG+AGG | 0.631116 | 8.4:-1007608 | MS.gene43414:intron |
| ATAAGTTCCCGAACAGCAAG+TGG | 0.632187 | 8.4:-1005191 | MS.gene43414:CDS |
| TGGTGAAGCTAATGAGTGGA+AGG | 0.633476 | 8.4:-1006009 | MS.gene43414:CDS |
| GAGACAGATTGATATCTACC+AGG | 0.637534 | 8.4:-1006439 | MS.gene43414:intron |
| TGAGGGAAAGGGAAATGGTG+AGG | 0.637716 | 8.4:-1008431 | None:intergenic |
| AACAACACAAACACTGTTGG+GGG | 0.647416 | 8.4:-1005089 | MS.gene43414:CDS |
| ATTGTAATCTCAGCTTGAAG+AGG | 0.647918 | 8.4:+1006735 | None:intergenic |
| AGACGAAAAGAAAAGTGCAA+TGG | 0.651443 | 8.4:-1006847 | MS.gene43414:CDS |
| TGAGAAAAGGACACTAGAGA+GGG | 0.660251 | 8.4:-1006072 | MS.gene43414:CDS |
| AGTTCCCGAACAGCAAGTGG+TGG | 0.662519 | 8.4:-1005188 | MS.gene43414:CDS |
| GTGTGAAAAGCAATATGGAG+AGG | 0.669978 | 8.4:-1008409 | MS.gene43414:CDS |
| TATATCAGAGAGAACAGCCA+AGG | 0.670465 | 8.4:-1005389 | MS.gene43414:CDS |
| CCAACACCATAGGGTCTGAG+AGG | 0.675725 | 8.4:+1008373 | None:intergenic |
| TTTCAGCTGAGAAATGAAGT+CGG | 0.679362 | 8.4:-1007326 | MS.gene43414:intron |
| GTGGAAGGATGAAAATGACA+AGG | 0.684047 | 8.4:-1005994 | MS.gene43414:CDS |
| TGTAATCTCAGCTTGAAGAG+GGG | 0.692586 | 8.4:+1006737 | None:intergenic |
| CAAATGGTGAAGCTAATGAG+TGG | 0.695992 | 8.4:-1006013 | MS.gene43414:CDS |
| GGGTCTGAGAGGACAACTGG+AGG | 0.711528 | 8.4:+1008384 | None:intergenic |
| AAGCATTGCTAGATGCAGAG+AGG | 0.719701 | 8.4:-1006530 | MS.gene43414:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATAAAAAAAAAAAAAA+GGG | + | chr8.4:1006111-1006130 | None:intergenic | 0.0% |
| !! | TTATTATAAAAAAAAAAAAA+AGG | + | chr8.4:1006112-1006131 | None:intergenic | 0.0% |
| !!! | TTTTTTTTATAATAAAAAAT+TGG | - | chr8.4:1006117-1006136 | MS.gene43414:intron | 0.0% |
| !! | TAATTATACTACAAATTAAT+AGG | + | chr8.4:1005034-1005053 | None:intergenic | 10.0% |
| !! | AAATAAAACTGTAGTATTTA+AGG | + | chr8.4:1006647-1006666 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr8.4:1005373-1005392 | MS.gene43414:CDS | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr8.4:1005374-1005393 | None:intergenic | 15.0% |
| !! | AATGATTACATAAAGTTATA+AGG | + | chr8.4:1004808-1004827 | None:intergenic | 15.0% |
| !! | ATATACTGAAATAAATCTTA+AGG | - | chr8.4:1006707-1006726 | MS.gene43414:intron | 15.0% |
| !! | TATACTGAAATAAATCTTAA+GGG | - | chr8.4:1006708-1006727 | MS.gene43414:intron | 15.0% |
| !!! | ACAATTTTATAACATTGTTA+TGG | + | chr8.4:1008396-1008415 | None:intergenic | 15.0% |
| !!! | GTTTTATTTTGTTACTTATA+AGG | - | chr8.4:1006658-1006677 | MS.gene43414:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr8.4:1005397-1005416 | MS.gene43414:CDS | 15.0% |
| !!! | TTTAAAACTCTAATAAAGAT+TGG | + | chr8.4:1004661-1004680 | None:intergenic | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr8.4:1005383-1005402 | None:intergenic | 20.0% |
| !! | AATGTTATAAAATTGTTGCA+GGG | - | chr8.4:1008400-1008419 | MS.gene43414:CDS | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr8.4:1005460-1005479 | MS.gene43414:intron | 20.0% |
| !! | AGTTTGTAGAAATTTCATTT+AGG | + | chr8.4:1007045-1007064 | None:intergenic | 20.0% |
| !! | ATAACTTTATGTAATCATTG+TGG | - | chr8.4:1004809-1004828 | MS.gene43414:CDS | 20.0% |
| !! | ATATTTGTCTGTTGAAATAA+AGG | + | chr8.4:1007394-1007413 | None:intergenic | 20.0% |
| !! | ATGTAGTTCAATATGATATA+TGG | + | chr8.4:1008157-1008176 | None:intergenic | 20.0% |
| !! | GTTTGTAGAAATTTCATTTA+GGG | + | chr8.4:1007044-1007063 | None:intergenic | 20.0% |
| !! | TAATTAAAATACCTCTTCTA+TGG | + | chr8.4:1004913-1004932 | None:intergenic | 20.0% |
| !! | TATTTGTCTGTTGAAATAAA+GGG | + | chr8.4:1007393-1007412 | None:intergenic | 20.0% |
| !!! | AACAATTGTTTTGATTTCTT+CGG | + | chr8.4:1007614-1007633 | None:intergenic | 20.0% |
| !!! | ATATTGTTATTGTAGTTTTC+AGG | + | chr8.4:1006691-1006710 | None:intergenic | 20.0% |
| !!! | GAAGTATACTTCATTTTAAT+AGG | + | chr8.4:1007463-1007482 | None:intergenic | 20.0% |
| !!! | GTTGTTTTTATAAGTTATCT+TGG | - | chr8.4:1006893-1006912 | MS.gene43414:intron | 20.0% |
| !!! | TTTATGAAATGTGTGTTTTA+TGG | + | chr8.4:1008094-1008113 | None:intergenic | 20.0% |
| ! | AAAAGTGAGACTAAAAACAA+TGG | - | chr8.4:1007243-1007262 | MS.gene43414:intron | 25.0% |
| ! | AACATGCATGACATAATTAA+TGG | + | chr8.4:1004989-1005008 | None:intergenic | 25.0% |
| ! | AATCTATCTATACAAACACA+TGG | - | chr8.4:1004933-1004952 | MS.gene43414:CDS | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | - | chr8.4:1005340-1005359 | MS.gene43414:intron | 25.0% |
| ! | AGCTAAAGATGAAGAAATTA+TGG | - | chr8.4:1007774-1007793 | MS.gene43414:intron | 25.0% |
| ! | ATATCCATTCAATACTAGTT+TGG | + | chr8.4:1004550-1004569 | None:intergenic | 25.0% |
| ! | ATGTCATCTATATAAAGTGT+CGG | + | chr8.4:1007842-1007861 | None:intergenic | 25.0% |
| ! | CAATGTTATAAAATTGTTGC+AGG | - | chr8.4:1008399-1008418 | MS.gene43414:CDS | 25.0% |
| ! | CCATATTAGACTGAATAATA+CGG | + | chr8.4:1005141-1005160 | None:intergenic | 25.0% |
| ! | TAAAATGAAGTATACTTCTG+CGG | - | chr8.4:1007465-1007484 | MS.gene43414:intron | 25.0% |
| ! | TAAACAAAGAACCTTTGAAT+TGG | + | chr8.4:1004179-1004198 | None:intergenic | 25.0% |
| ! | TCAAACATGATAATTCAAAC+AGG | - | chr8.4:1007018-1007037 | MS.gene43414:intron | 25.0% |
| ! | TTGTGTTCAACTTATACTTA+TGG | + | chr8.4:1004751-1004770 | None:intergenic | 25.0% |
| !! | AATTGATTTAGATGCTTACA+TGG | + | chr8.4:1007186-1007205 | None:intergenic | 25.0% |
| !! | ACTAGGATTTTCCATATTTA+AGG | - | chr8.4:1006761-1006780 | MS.gene43414:CDS | 25.0% |
| !! | ATAAACTTCAAAGGTTTTCA+TGG | + | chr8.4:1006607-1006626 | None:intergenic | 25.0% |
| !! | GGTTTTGCATATAAATTTTC+AGG | - | chr8.4:1006411-1006430 | MS.gene43414:intron | 25.0% |
| !! | TGATATATTGACTGTTTGTT+TGG | - | chr8.4:1006366-1006385 | MS.gene43414:intron | 25.0% |
| !! | TTCTGCATAAGAATAGATTT+TGG | + | chr8.4:1005619-1005638 | None:intergenic | 25.0% |
| !! | TTTCAACTTCAAGAATCTTT+TGG | + | chr8.4:1006222-1006241 | None:intergenic | 25.0% |
| !!! | AATAATACGGTTCTAAATTG+AGG | + | chr8.4:1005128-1005147 | None:intergenic | 25.0% |
| !!! | CTGGTCAATACTTTTTTTTT+GGG | + | chr8.4:1004576-1004595 | None:intergenic | 25.0% |
| !!! | TAAATTTTCAGGATGAGAAA+AGG | - | chr8.4:1006422-1006441 | MS.gene43414:intron | 25.0% |
| !!! | TCAATTTTCAACGTGTTATT+TGG | - | chr8.4:1007200-1007219 | MS.gene43414:intron | 25.0% |
| !!! | TCTGGTCAATACTTTTTTTT+TGG | + | chr8.4:1004577-1004596 | None:intergenic | 25.0% |
| AAAAACAACACAAACACTGT+TGG | - | chr8.4:1007415-1007434 | MS.gene43414:intron | 30.0% | |
| AAAACAACACAAACACTGTT+GGG | - | chr8.4:1007416-1007435 | MS.gene43414:intron | 30.0% | |
| AAAGAGAGGTCATTAAATTG+AGG | - | chr8.4:1007719-1007738 | MS.gene43414:intron | 30.0% | |
| AAATACTACCATTTCCAACA+AGG | - | chr8.4:1005820-1005839 | MS.gene43414:intron | 30.0% | |
| AAATGAACTATTCAAGTCAG+TGG | - | chr8.4:1004770-1004789 | MS.gene43414:CDS | 30.0% | |
| AAATGATTCCTTGTTGGAAA+TGG | + | chr8.4:1005831-1005850 | None:intergenic | 30.0% | |
| AAATTATTACCAGTGTCTTC+AGG | - | chr8.4:1007948-1007967 | MS.gene43414:intron | 30.0% | |
| AAGCTGAGATTACAATGTAT+AGG | - | chr8.4:1005779-1005798 | MS.gene43414:intron | 30.0% | |
| AATCAGTTGTGAGATTGTTT+GGG | + | chr8.4:1006982-1007001 | None:intergenic | 30.0% | |
| AATTTACAACTACCACAAAC+AGG | - | chr8.4:1006165-1006184 | MS.gene43414:intron | 30.0% | |
| ACATAATTAATGGTCCCTAA+TGG | + | chr8.4:1004979-1004998 | None:intergenic | 30.0% | |
| ACATGTTGAAGAAAAGGATA+TGG | - | chr8.4:1007491-1007510 | MS.gene43414:intron | 30.0% | |
| ATAAGTAAAGTTGCTGATAG+TGG | - | chr8.4:1007520-1007539 | MS.gene43414:intron | 30.0% | |
| ATGTTTCAAAGTCTACAAGT+AGG | - | chr8.4:1008016-1008035 | MS.gene43414:intron | 30.0% | |
| CAGGATGATATAAACTTCAA+AGG | + | chr8.4:1006616-1006635 | None:intergenic | 30.0% | |
| CCGTATTATTCAGTCTAATA+TGG | - | chr8.4:1005138-1005157 | MS.gene43414:CDS | 30.0% | |
| GAAGTCTTTCATATCACATA+CGG | + | chr8.4:1004712-1004731 | None:intergenic | 30.0% | |
| GATTACAATGTATAGGAATG+AGG | - | chr8.4:1005786-1005805 | MS.gene43414:intron | 30.0% | |
| GTTCAATATGATATATGGAG+AGG | + | chr8.4:1008152-1008171 | None:intergenic | 30.0% | |
| TAATCAGTTGTGAGATTGTT+TGG | + | chr8.4:1006983-1007002 | None:intergenic | 30.0% | |
| TGAAAAGGAAAATGAGATAC+AGG | - | chr8.4:1007543-1007562 | MS.gene43414:intron | 30.0% | |
| TGTTTGTGGTAGTTGTAAAT+TGG | + | chr8.4:1006166-1006185 | None:intergenic | 30.0% | |
| TTATACTTATGGTGACTTCT+AGG | + | chr8.4:1004740-1004759 | None:intergenic | 30.0% | |
| TTCACCATTTGCAATTCTAT+TGG | + | chr8.4:1006485-1006504 | None:intergenic | 30.0% | |
| TTGATTGGACTCCTTAAATA+TGG | + | chr8.4:1006775-1006794 | None:intergenic | 30.0% | |
| TTTGCAAGGATAGATCAAAA+TGG | - | chr8.4:1005848-1005867 | MS.gene43414:intron | 30.0% | |
| ! | AGGGTAAGTTTAAGTTTAAG+AGG | - | chr8.4:1006727-1006746 | MS.gene43414:CDS | 30.0% |
| ! | AGTTTGATTTAGTTTCCATC+TGG | - | chr8.4:1004253-1004272 | MS.gene43414:CDS | 30.0% |
| ! | ATAAGCAGCTTTATCCATTA+GGG | - | chr8.4:1004962-1004981 | MS.gene43414:CDS | 30.0% |
| ! | GAGAGAAAAACTTGCATTTT+AGG | + | chr8.4:1005593-1005612 | None:intergenic | 30.0% |
| ! | GGGTAAGTTTAAGTTTAAGA+GGG | - | chr8.4:1006728-1006747 | MS.gene43414:CDS | 30.0% |
| ! | GTAGTGTGCAAAGTATTAAT+TGG | - | chr8.4:1005422-1005441 | MS.gene43414:CDS | 30.0% |
| ! | TACTAGTTTGGCATAAAACA+AGG | + | chr8.4:1004538-1004557 | None:intergenic | 30.0% |
| ! | TATGCCAAACTAGTATTGAA+TGG | - | chr8.4:1004543-1004562 | MS.gene43414:intron | 30.0% |
| ! | TGTGCAAAGTATTAATTGGA+GGG | - | chr8.4:1005426-1005445 | MS.gene43414:intron | 30.0% |
| ! | TTTGTTTGGTTGATCTTTTG+TGG | - | chr8.4:1006380-1006399 | MS.gene43414:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr8.4:1005509-1005490 | None:intergenic | 30.0% |
| !!! | GCGAGATTTCTCTAAAATTT+TGG | + | chr8.4:1006197-1006216 | None:intergenic | 30.0% |
| !!! | TGTCAGGTTTTTTGTATGAT+AGG | - | chr8.4:1007692-1007711 | MS.gene43414:intron | 30.0% |
| !!! | TGTGATGTAGATCTCTTTTT+TGG | + | chr8.4:1007346-1007365 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr8.4:1005292-1005311 | MS.gene43414:intron | 30.0% |
| !!! | TTTTTTCTGTTTCCATCATG+AGG | - | chr8.4:1004223-1004242 | MS.gene43414:CDS | 30.0% |
| AAACAACACAAACACTGTTG+GGG | - | chr8.4:1007417-1007436 | MS.gene43414:intron | 35.0% | |
| AAACTCAATACTCCTCATGA+TGG | + | chr8.4:1004238-1004257 | None:intergenic | 35.0% | |
| AAAGCTTAGCCAAACTATTC+AGG | - | chr8.4:1006240-1006259 | MS.gene43414:CDS | 35.0% | |
| AAATGTAGACAGAGATGCAA+AGG | - | chr8.4:1007078-1007097 | MS.gene43414:intron | 35.0% | |
| AGACTAAAAACAATGGAGGA+AGG | - | chr8.4:1007250-1007269 | MS.gene43414:intron | 35.0% | |
| AGTGAGACTAAAAACAATGG+AGG | - | chr8.4:1007246-1007265 | MS.gene43414:intron | 35.0% | |
| ATTGAATGTAACCATGTGTC+AGG | + | chr8.4:1007913-1007932 | None:intergenic | 35.0% | |
| ATTGTAATCTCAGCTTGAAG+AGG | + | chr8.4:1005775-1005794 | None:intergenic | 35.0% | |
| CATTGTGGCAGAAAAAGTTA+AGG | - | chr8.4:1004824-1004843 | MS.gene43414:CDS | 35.0% | |
| CGGAAAACATGTTGAAGAAA+AGG | - | chr8.4:1007485-1007504 | MS.gene43414:intron | 35.0% | |
| CGTTTGCATAACCAATTCAA+AGG | - | chr8.4:1004165-1004184 | MS.gene43414:intron | 35.0% | |
| CTTCATTTCTCAGCTGAAAA+TGG | + | chr8.4:1005180-1005199 | None:intergenic | 35.0% | |
| GATTAATCTCCAACACCATA+GGG | + | chr8.4:1004146-1004165 | None:intergenic | 35.0% | |
| GCAATTCAGAAACTTGTCTT+TGG | + | chr8.4:1006321-1006340 | None:intergenic | 35.0% | |
| TTCATAGATAACAGCACTTC+AGG | - | chr8.4:1005912-1005931 | MS.gene43414:intron | 35.0% | |
| TTGTAATCTCAGCTTGAAGA+GGG | + | chr8.4:1005774-1005793 | None:intergenic | 35.0% | |
| TTTCAGCTGAGAAATGAAGT+CGG | - | chr8.4:1005181-1005200 | MS.gene43414:CDS | 35.0% | |
| ! | AAGCAAAAGGTACACTGATT+TGG | - | chr8.4:1005244-1005263 | MS.gene43414:CDS | 35.0% |
| ! | AGACGAAAAGAAAAGTGCAA+TGG | - | chr8.4:1005660-1005679 | MS.gene43414:intron | 35.0% |
| ! | AGAGTGAAATCAAAGCACTA+AGG | - | chr8.4:1004862-1004881 | MS.gene43414:CDS | 35.0% |
| ! | AGTATTTAAGGCATGAAAGC+AGG | + | chr8.4:1006635-1006654 | None:intergenic | 35.0% |
| ! | AGTCATTTGGTTTCTTGCTT+TGG | + | chr8.4:1007654-1007673 | None:intergenic | 35.0% |
| ! | CAACTTCAAGAATCTTTTGG+CGG | + | chr8.4:1006219-1006238 | None:intergenic | 35.0% |
| ! | CATAAGCAGCTTTATCCATT+AGG | - | chr8.4:1004961-1004980 | MS.gene43414:CDS | 35.0% |
| ! | GACCAAAATTTAGAACGATG+CGG | + | chr8.4:1005082-1005101 | None:intergenic | 35.0% |
| ! | GGTTCTAGCAATCTTCAATA+TGG | + | chr8.4:1005572-1005591 | None:intergenic | 35.0% |
| ! | GTGTGCAAAGTATTAATTGG+AGG | - | chr8.4:1005425-1005444 | MS.gene43414:intron | 35.0% |
| ! | TGATCTTTTGTGGTAACTTG+TGG | - | chr8.4:1006390-1006409 | MS.gene43414:intron | 35.0% |
| ! | TGTTGGGGGAAATTTAAAAC+TGG | - | chr8.4:1007432-1007451 | MS.gene43414:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr8.4:1005526-1005545 | MS.gene43414:intron | 35.0% |
| !! | TGTTATTTGGTGTTCACTTC+AGG | - | chr8.4:1007213-1007232 | MS.gene43414:intron | 35.0% |
| !! | TTATGGTGACTTCTAGGATA+AGG | + | chr8.4:1004734-1004753 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr8.4:1005525-1005544 | None:intergenic | 35.0% |
| !! | TTCCGCATCGTTCTAAATTT+TGG | - | chr8.4:1005077-1005096 | MS.gene43414:CDS | 35.0% |
| AACAACACAAACACTGTTGG+GGG | - | chr8.4:1007418-1007437 | MS.gene43414:intron | 40.0% | |
| AGAAGAGAGAAGGATTATGC+AGG | - | chr8.4:1006558-1006577 | MS.gene43414:CDS | 40.0% | |
| AGAGGATCGTCTTAAGCAAA+AGG | - | chr8.4:1005231-1005250 | MS.gene43414:CDS | 40.0% | |
| AGCTTGCAAACTACTGTCTT+TGG | + | chr8.4:1007758-1007777 | None:intergenic | 40.0% | |
| ATACATAGCTAGTGAAAGCG+GGG | + | chr8.4:1007817-1007836 | None:intergenic | 40.0% | |
| ATGAGAAAAGGACACTAGAG+AGG | - | chr8.4:1006434-1006453 | MS.gene43414:intron | 40.0% | |
| CAAATGGTGAAGCTAATGAG+TGG | - | chr8.4:1006494-1006513 | MS.gene43414:CDS | 40.0% | |
| CATCTCTGTCTACATTTGCA+AGG | + | chr8.4:1007075-1007094 | None:intergenic | 40.0% | |
| CATTTCTCAGCTGAAAATGG+TGG | + | chr8.4:1005177-1005196 | None:intergenic | 40.0% | |
| CCAAACTATTCAGGAACTTG+AGG | - | chr8.4:1006249-1006268 | MS.gene43414:CDS | 40.0% | |
| CCAACAAGGAATCATTTGCA+AGG | - | chr8.4:1005834-1005853 | MS.gene43414:intron | 40.0% | |
| CCTCAAGTTCCTGAATAGTT+TGG | + | chr8.4:1006252-1006271 | None:intergenic | 40.0% | |
| CCTTGCAAATGATTCCTTGT+TGG | + | chr8.4:1005837-1005856 | None:intergenic | 40.0% | |
| CGATACATAGCTAGTGAAAG+CGG | + | chr8.4:1007819-1007838 | None:intergenic | 40.0% | |
| CGATTAATCTCCAACACCAT+AGG | + | chr8.4:1004147-1004166 | None:intergenic | 40.0% | |
| CTGCTCACAAGTAGAAAGTT+TGG | + | chr8.4:1004633-1004652 | None:intergenic | 40.0% | |
| GAAACGCAAAAAATCTTGCC+TGG | + | chr8.4:1006089-1006108 | None:intergenic | 40.0% | |
| GAGAAATGAAGTCGGTAAAC+TGG | - | chr8.4:1005189-1005208 | MS.gene43414:CDS | 40.0% | |
| GAGACAGATTGATATCTACC+AGG | - | chr8.4:1006068-1006087 | MS.gene43414:CDS | 40.0% | |
| GAGGAAGTCATCTTAGCTAA+CGG | - | chr8.4:1006268-1006287 | MS.gene43414:CDS | 40.0% | |
| GATACATAGCTAGTGAAAGC+GGG | + | chr8.4:1007818-1007837 | None:intergenic | 40.0% | |
| GCTAGCAAGGGTAAAAGTTT+CGG | - | chr8.4:1006459-1006478 | MS.gene43414:CDS | 40.0% | |
| GTCAGTATCAGAAACCAACA+TGG | - | chr8.4:1007886-1007905 | MS.gene43414:intron | 40.0% | |
| GTCTTTCATATCACATACGG+TGG | + | chr8.4:1004709-1004728 | None:intergenic | 40.0% | |
| GTGAGGTGTGAAAAGCAATA+TGG | - | chr8.4:1004093-1004112 | MS.gene43414:intron | 40.0% | |
| GTGGAAGGATGAAAATGACA+AGG | - | chr8.4:1006513-1006532 | MS.gene43414:CDS | 40.0% | |
| GTGTGAAAAGCAATATGGAG+AGG | - | chr8.4:1004098-1004117 | MS.gene43414:intron | 40.0% | |
| GTTCGGGAACTTATGATGTT+AGG | + | chr8.4:1007310-1007329 | None:intergenic | 40.0% | |
| GTTGAACAGCTTCTCTTGAT+TGG | + | chr8.4:1006790-1006809 | None:intergenic | 40.0% | |
| TATATCAGAGAGAACAGCCA+AGG | - | chr8.4:1007118-1007137 | MS.gene43414:intron | 40.0% | |
| TCATGACTGAGACAATGATC+TGG | + | chr8.4:1004595-1004614 | None:intergenic | 40.0% | |
| TCGGCCAATAGAATTGCAAA+TGG | - | chr8.4:1006478-1006497 | MS.gene43414:CDS | 40.0% | |
| TGAGAAAAGGACACTAGAGA+GGG | - | chr8.4:1006435-1006454 | MS.gene43414:intron | 40.0% | |
| TGAGAATCAAACTGACCAGA+TGG | + | chr8.4:1004271-1004290 | None:intergenic | 40.0% | |
| TGTAATCTCAGCTTGAAGAG+GGG | + | chr8.4:1005773-1005792 | None:intergenic | 40.0% | |
| TTACAACTACCACAAACAGG+AGG | - | chr8.4:1006168-1006187 | MS.gene43414:intron | 40.0% | |
| TTTCTTCCACTCTACTTCCA+TGG | + | chr8.4:1008226-1008245 | None:intergenic | 40.0% | |
| TTTGCAAAGTGCACTAGAGA+AGG | - | chr8.4:1006002-1006021 | MS.gene43414:CDS | 40.0% | |
| ! | AAGAGGGTGTAATGCAAACT+AGG | - | chr8.4:1006744-1006763 | MS.gene43414:CDS | 40.0% |
| ! | CTTCACTTTCAGCATTGAAC+TGG | + | chr8.4:1007591-1007610 | None:intergenic | 40.0% |
| ! | GAACAGAATCGTCATCCTTT+TGG | + | chr8.4:1005732-1005751 | None:intergenic | 40.0% |
| ! | TATCAGCCACACTAACCTTT+TGG | + | chr8.4:1008337-1008356 | None:intergenic | 40.0% |
| !! | AACGGAGGGAGTATTAAAGT+AGG | - | chr8.4:1005544-1005563 | MS.gene43414:intron | 40.0% |
| !! | ACGGTTCTAAATTGAGGTAG+CGG | + | chr8.4:1005122-1005141 | None:intergenic | 40.0% |
| !! | AGTTGCTGATAGTGGTGAAA+AGG | - | chr8.4:1007528-1007547 | MS.gene43414:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.4:1005530-1005549 | MS.gene43414:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.4:1005549-1005530 | None:intergenic | 40.0% |
| ACTCCTCCAAAAGGTTAGTG+TGG | - | chr8.4:1008328-1008347 | MS.gene43414:intron | 45.0% | |
| AGATGCAGCTGCTAGAGAAA+AGG | - | chr8.4:1008254-1008273 | MS.gene43414:intron | 45.0% | |
| AGCAATGGCTAGAAGAGAGA+AGG | - | chr8.4:1006548-1006567 | MS.gene43414:CDS | 45.0% | |
| ATAAGTTCCCGAACAGCAAG+TGG | - | chr8.4:1007316-1007335 | MS.gene43414:CDS | 45.0% | |
| CGAGAGACTTAGAGTTACAG+AGG | - | chr8.4:1005213-1005232 | MS.gene43414:CDS | 45.0% | |
| CGCAGAAGCAACACTTAGAA+GGG | - | chr8.4:1005696-1005715 | MS.gene43414:intron | 45.0% | |
| CTTCCAATAGCAGATGCTCT+TGG | + | chr8.4:1007370-1007389 | None:intergenic | 45.0% | |
| GAAACACAGACTCCTCCAAA+AGG | - | chr8.4:1008319-1008338 | MS.gene43414:intron | 45.0% | |
| GAAGGATAAGGCCATAGAAG+AGG | - | chr8.4:1004899-1004918 | MS.gene43414:CDS | 45.0% | |
| GTATGATAGGCTGCAAAGAG+AGG | - | chr8.4:1007705-1007724 | MS.gene43414:intron | 45.0% | |
| GTTAGTGTCAGTGTCGTGTT+TGG | - | chr8.4:1007970-1007989 | MS.gene43414:intron | 45.0% | |
| TCTTCTAGCCATTGCTTGAC+AGG | + | chr8.4:1006544-1006563 | None:intergenic | 45.0% | |
| TGACACTAACCTGAAGACAC+TGG | + | chr8.4:1007960-1007979 | None:intergenic | 45.0% | |
| TGGTGAAGCTAATGAGTGGA+AGG | - | chr8.4:1006498-1006517 | MS.gene43414:CDS | 45.0% | |
| TTGGTCCACAACTGCAATTG+TGG | - | chr8.4:1005096-1005115 | MS.gene43414:CDS | 45.0% | |
| ! | AAGCATTGCTAGATGCAGAG+AGG | - | chr8.4:1005977-1005996 | MS.gene43414:CDS | 45.0% |
| ! | AAGGGTGCATGCAAACCAAA+AGG | - | chr8.4:1005714-1005733 | MS.gene43414:intron | 45.0% |
| ! | TTTTGGTCTCCTCCTGTTTG+TGG | + | chr8.4:1006180-1006199 | None:intergenic | 45.0% |
| !! | CAACCAAGAGCATCTGCTAT+TGG | - | chr8.4:1007364-1007383 | MS.gene43414:intron | 45.0% |
| !! | CCTTCTAAGTGTTGCTTCTG+CGG | + | chr8.4:1005698-1005717 | None:intergenic | 45.0% |
| !! | GACTGAAGCTCTGAAGGATA+AGG | - | chr8.4:1004887-1004906 | MS.gene43414:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8.4:1005529-1005548 | MS.gene43414:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8.4:1005548-1005529 | None:intergenic | 45.0% |
| !! | TTATATTCATTATAATTTAT+AGG | + | chr8.4:1004343-1004362 | None:intergenic | 5.0% |
| ACACGTGCCAGACATTGACA+CGG | + | chr8.4:1007868-1007887 | None:intergenic | 50.0% | |
| ACATGTCCCGTGTCAATGTC+TGG | - | chr8.4:1007858-1007877 | MS.gene43414:intron | 50.0% | |
| ACCAACATGGTCCTGACACA+TGG | - | chr8.4:1007899-1007918 | MS.gene43414:intron | 50.0% | |
| ACCATGTGTCAGGACCATGT+TGG | + | chr8.4:1007903-1007922 | None:intergenic | 50.0% | |
| ACTAGAGAGGGAGCTAGCAA+GGG | - | chr8.4:1006447-1006466 | MS.gene43414:CDS | 50.0% | |
| AGGTCATGCCTGTCAAGCAA+TGG | - | chr8.4:1006533-1006552 | MS.gene43414:CDS | 50.0% | |
| AGTTGTCCTCTCAGACCCTA+TGG | - | chr8.4:1004128-1004147 | MS.gene43414:intron | 50.0% | |
| ATAGGGTCTGAGAGGACAAC+TGG | + | chr8.4:1004129-1004148 | None:intergenic | 50.0% | |
| CAAGGCAGAATCACAGCTGA+AGG | - | chr8.4:1007136-1007155 | MS.gene43414:intron | 50.0% | |
| CCAAGTCCATGGAAGTAGAG+TGG | - | chr8.4:1008217-1008236 | MS.gene43414:intron | 50.0% | |
| CCACTCTACTTCCATGGACT+TGG | + | chr8.4:1008220-1008239 | None:intergenic | 50.0% | |
| CCGCAGAAGCAACACTTAGA+AGG | - | chr8.4:1005695-1005714 | MS.gene43414:intron | 50.0% | |
| CTTCAGCTGTGATTCTGCCT+TGG | + | chr8.4:1007138-1007157 | None:intergenic | 50.0% | |
| GGGGCAATGGCGTTATCAAT+TGG | + | chr8.4:1005754-1005773 | None:intergenic | 50.0% | |
| TCGTCACTGCACGAGTCATT+TGG | + | chr8.4:1007667-1007686 | None:intergenic | 50.0% | |
| TGACTCGTGCAGTGACGATT+TGG | - | chr8.4:1007669-1007688 | MS.gene43414:CDS | 50.0% | |
| ! | AAGGTCGACTGAAGCTCTGA+AGG | - | chr8.4:1004881-1004900 | MS.gene43414:CDS | 50.0% |
| ! | CAGCCACACTAACCTTTTGG+AGG | + | chr8.4:1008334-1008353 | None:intergenic | 50.0% |
| ! | TGATGCACTGACCAAGTCCA+TGG | - | chr8.4:1008206-1008225 | MS.gene43414:intron | 50.0% |
| !! | TGCAGTGACGATTTGGTGTC+AGG | - | chr8.4:1007676-1007695 | MS.gene43414:intron | 50.0% |
| !! | TTGGACCACCACTTGCTGTT+CGG | + | chr8.4:1007327-1007346 | None:intergenic | 50.0% |
| AGCGGCCACAATTGCAGTTG+TGG | + | chr8.4:1005104-1005123 | None:intergenic | 55.0% | |
| AGTTCCCGAACAGCAAGTGG+TGG | - | chr8.4:1007319-1007338 | MS.gene43414:CDS | 55.0% | |
| CACGTGCCAGACATTGACAC+GGG | + | chr8.4:1007867-1007886 | None:intergenic | 55.0% | |
| CACTAGAGAGGGAGCTAGCA+AGG | - | chr8.4:1006446-1006465 | MS.gene43414:CDS | 55.0% | |
| CCAACACCATAGGGTCTGAG+AGG | + | chr8.4:1004137-1004156 | None:intergenic | 55.0% | |
| CCTCTCAGACCCTATGGTGT+TGG | - | chr8.4:1004134-1004153 | MS.gene43414:intron | 55.0% | |
| CTCAGCTTGAAGAGGGGCAA+TGG | + | chr8.4:1005767-1005786 | None:intergenic | 55.0% | |
| !! | TGGACCACCACTTGCTGTTC+GGG | + | chr8.4:1007326-1007345 | None:intergenic | 55.0% |
| GGGTCTGAGAGGACAACTGG+AGG | + | chr8.4:1004126-1004145 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 1004090 | 1008439 | 1004090 | ID=MS.gene43414 |
| chr8.4 | mRNA | 1004090 | 1008439 | 1004090 | ID=MS.gene43414.t1;Parent=MS.gene43414 |
| chr8.4 | exon | 1008343 | 1008439 | 1008343 | ID=MS.gene43414.t1.exon1;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1008343 | 1008439 | 1008343 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1007609 | 1007694 | 1007609 | ID=MS.gene43414.t1.exon2;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1007609 | 1007694 | 1007609 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1007277 | 1007342 | 1007277 | ID=MS.gene43414.t1.exon3;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1007277 | 1007342 | 1007277 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1006722 | 1006892 | 1006722 | ID=MS.gene43414.t1.exon4;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1006722 | 1006892 | 1006722 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1006440 | 1006610 | 1006440 | ID=MS.gene43414.t1.exon5;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1006440 | 1006610 | 1006440 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1006187 | 1006342 | 1006187 | ID=MS.gene43414.t1.exon6;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1006187 | 1006342 | 1006187 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1005950 | 1006096 | 1005950 | ID=MS.gene43414.t1.exon7;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1005950 | 1006096 | 1005950 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1005372 | 1005443 | 1005372 | ID=MS.gene43414.t1.exon8;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1005372 | 1005443 | 1005372 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1004734 | 1005294 | 1004734 | ID=MS.gene43414.t1.exon9;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1004734 | 1005294 | 1004734 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1004189 | 1004340 | 1004189 | ID=MS.gene43414.t1.exon10;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1004189 | 1004340 | 1004189 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| chr8.4 | exon | 1004090 | 1004108 | 1004090 | ID=MS.gene43414.t1.exon11;Parent=MS.gene43414.t1 |
| chr8.4 | CDS | 1004090 | 1004108 | 1004090 | ID=cds.MS.gene43414.t1;Parent=MS.gene43414.t1 |
| Gene Sequence |
| Protein sequence |
