Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43681.t1 | XP_003615463.1 | 96.5 | 258 | 9 | 0 | 1 | 258 | 1 | 258 | 1.80E-146 | 528.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43681.t1 | O24496 | 73.6 | 258 | 68 | 0 | 1 | 258 | 1 | 258 | 4.3e-117 | 422.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43681.t1 | G7KDB9 | 96.5 | 258 | 9 | 0 | 1 | 258 | 1 | 258 | 1.3e-146 | 528.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene98732 | MS.gene43681 | PPI |
MS.gene032186 | MS.gene43681 | PPI |
MS.gene056597 | MS.gene43681 | PPI |
MS.gene056395 | MS.gene43681 | PPI |
MS.gene052004 | MS.gene43681 | PPI |
MS.gene85269 | MS.gene43681 | PPI |
MS.gene43681 | MS.gene28327 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43681.t1 | MTR_5g068440 | 96.512 | 258 | 9 | 0 | 1 | 258 | 1 | 258 | 0.0 | 525 |
MS.gene43681.t1 | MTR_4g068100 | 40.000 | 260 | 142 | 7 | 3 | 256 | 2 | 253 | 3.14e-51 | 168 |
MS.gene43681.t1 | MTR_2g099090 | 39.313 | 262 | 145 | 7 | 1 | 256 | 60 | 313 | 6.98e-51 | 169 |
MS.gene43681.t1 | MTR_2g099090 | 39.313 | 262 | 145 | 7 | 1 | 256 | 76 | 329 | 7.97e-51 | 169 |
MS.gene43681.t1 | MTR_4g068100 | 39.695 | 262 | 144 | 7 | 1 | 256 | 62 | 315 | 9.01e-51 | 169 |
MS.gene43681.t1 | MTR_4g068100 | 38.211 | 246 | 138 | 7 | 1 | 240 | 62 | 299 | 3.60e-42 | 146 |
MS.gene43681.t1 | MTR_4g068100 | 40.000 | 235 | 127 | 7 | 28 | 256 | 97 | 323 | 1.48e-41 | 145 |
MS.gene43681.t1 | MTR_2g072190 | 38.636 | 176 | 92 | 8 | 12 | 176 | 58 | 228 | 1.34e-24 | 98.6 |
MS.gene43681.t1 | MTR_2g072190 | 38.636 | 176 | 92 | 8 | 12 | 176 | 58 | 228 | 1.42e-24 | 99.0 |
MS.gene43681.t1 | MTR_2g072190 | 38.636 | 176 | 92 | 8 | 12 | 176 | 58 | 228 | 1.65e-24 | 99.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43681.t1 | AT3G10850 | 73.643 | 258 | 68 | 0 | 1 | 258 | 1 | 258 | 5.87e-149 | 416 |
MS.gene43681.t1 | AT1G06130 | 41.288 | 264 | 141 | 7 | 1 | 258 | 75 | 330 | 3.45e-62 | 198 |
MS.gene43681.t1 | AT1G06130 | 41.288 | 264 | 141 | 7 | 1 | 258 | 76 | 331 | 3.55e-62 | 198 |
MS.gene43681.t1 | AT2G31350 | 40.076 | 262 | 143 | 7 | 1 | 256 | 70 | 323 | 1.43e-60 | 194 |
MS.gene43681.t1 | AT2G31350 | 40.076 | 262 | 143 | 7 | 1 | 256 | 71 | 324 | 1.71e-60 | 194 |
MS.gene43681.t1 | AT2G43430 | 37.786 | 262 | 149 | 7 | 1 | 256 | 33 | 286 | 1.26e-53 | 175 |
MS.gene43681.t1 | AT2G43430 | 37.786 | 262 | 149 | 7 | 1 | 256 | 60 | 313 | 4.79e-53 | 174 |
MS.gene43681.t1 | AT2G43430 | 37.786 | 262 | 149 | 7 | 1 | 256 | 78 | 331 | 5.44e-53 | 175 |
MS.gene43681.t1 | AT2G31350 | 43.646 | 181 | 91 | 6 | 1 | 178 | 71 | 243 | 2.34e-44 | 150 |
MS.gene43681.t1 | AT1G53580 | 36.207 | 174 | 99 | 7 | 12 | 176 | 64 | 234 | 1.38e-23 | 97.1 |
MS.gene43681.t1 | AT1G53580 | 36.207 | 174 | 99 | 7 | 12 | 176 | 64 | 234 | 1.55e-23 | 97.1 |
Find 70 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTGAGCCAGACAATTTA+AGG | 0.138690 | 5.1:+53104069 | MS.gene43681:CDS |
TGGAGCAGATATTAATATTT+TGG | 0.156543 | 5.1:+53100164 | MS.gene43681:CDS |
AATATGAATAATTGTCTTCT+AGG | 0.191774 | 5.1:-53098933 | None:intergenic |
AATTCACCAGTTCAAGCTTT+AGG | 0.250356 | 5.1:+53105016 | MS.gene43681:CDS |
TTCAAGCTTTAGGAGAATTA+AGG | 0.267781 | 5.1:+53105026 | MS.gene43681:CDS |
GCCAGACAATTTAAGGATAC+TGG | 0.273291 | 5.1:+53104076 | MS.gene43681:CDS |
AGAACTTTCTCGGGTTCAAC+TGG | 0.279688 | 5.1:-53099087 | None:intergenic |
CACATAAGTTATTATGTTAC+TGG | 0.296178 | 5.1:+53101198 | MS.gene43681:CDS |
GGTAGATCAACCCTCATAAA+TGG | 0.308675 | 5.1:-53104182 | None:intergenic |
TCCAGTATCCTTAAATTGTC+TGG | 0.313488 | 5.1:-53104077 | None:intergenic |
TCTTCTTTACAGTTCATTGC+TGG | 0.336326 | 5.1:+53102580 | MS.gene43681:intron |
TTACAGTTCATTGCTGGTTG+TGG | 0.367935 | 5.1:+53102586 | MS.gene43681:intron |
AGGTGACGAACCTGGATTAC+AGG | 0.368154 | 5.1:-53104203 | None:intergenic |
TGTACTGATGCACTTGAAAA+TGG | 0.382962 | 5.1:+53100126 | MS.gene43681:CDS |
TGGAAAGCAATCCATTTATG+AGG | 0.407212 | 5.1:+53104171 | MS.gene43681:CDS |
TACAGTTCATTGCTGGTTGT+GGG | 0.407410 | 5.1:+53102587 | MS.gene43681:intron |
AGAAGCTTCTAGAACTTTCT+CGG | 0.413275 | 5.1:-53099097 | None:intergenic |
CAGTCACTCTCTGTAACATT+AGG | 0.418249 | 5.1:+53102643 | MS.gene43681:CDS |
ATAATAACTTATGTGACCTT+TGG | 0.423129 | 5.1:-53101190 | None:intergenic |
CAGTAAACTCGAGTTGGCTT+TGG | 0.432953 | 5.1:-53102673 | None:intergenic |
TCAATGGTTGAGGGAATTGT+TGG | 0.437025 | 5.1:-53104140 | None:intergenic |
GCTCAAAATCAGCGGCAAAC+TGG | 0.437847 | 5.1:+53104113 | MS.gene43681:CDS |
TAAGGAAGGTGAAAGACAAC+TGG | 0.446395 | 5.1:+53105044 | MS.gene43681:CDS |
CCACCGTAGACCTTGATTCC+AGG | 0.459806 | 5.1:-53100081 | None:intergenic |
AAATGTATTGCAGGAGAAGA+TGG | 0.460737 | 5.1:+53104988 | MS.gene43681:intron |
AATTCTCCTAAAGCTTGAAC+TGG | 0.461100 | 5.1:-53105022 | None:intergenic |
AAACGAGAAGATAAAGGAAT+TGG | 0.464557 | 5.1:+53100056 | MS.gene43681:CDS |
TGGTGGAAACGAGAAGATAA+AGG | 0.465352 | 5.1:+53100050 | MS.gene43681:CDS |
GCTTTCCAACTCGTCCTCAA+TGG | 0.482732 | 5.1:-53104156 | None:intergenic |
CTAGAAGCTTCTAATTCGCT+TGG | 0.482825 | 5.1:+53099108 | MS.gene43681:CDS |
GGAATTGGTGCCTGGAATCA+AGG | 0.483578 | 5.1:+53100071 | MS.gene43681:CDS |
CAACTCGTCCTCAATGGTTG+AGG | 0.484204 | 5.1:-53104150 | None:intergenic |
AATGTATTGCAGGAGAAGAT+GGG | 0.490218 | 5.1:+53104989 | MS.gene43681:intron |
AAGATAAAGGAATTGGTGCC+TGG | 0.495288 | 5.1:+53100063 | MS.gene43681:CDS |
GAAGCTTCTAGAACTTTCTC+GGG | 0.496664 | 5.1:-53099096 | None:intergenic |
TCCTTACTACTCACCATCAC+TGG | 0.496924 | 5.1:+53099148 | MS.gene43681:CDS |
ACCAGTGATGGTGAGTAGTA+AGG | 0.509129 | 5.1:-53099149 | None:intergenic |
AACTCGTCCTCAATGGTTGA+GGG | 0.518600 | 5.1:-53104149 | None:intergenic |
GGTTGATCTACCTGTAATCC+AGG | 0.519318 | 5.1:+53104193 | MS.gene43681:CDS |
CTTCTAGGCAAGGGATGTGA+TGG | 0.525041 | 5.1:-53098918 | None:intergenic |
AATGGTGATAAGGTGCATCT+TGG | 0.529288 | 5.1:+53100144 | MS.gene43681:CDS |
TGTTACTGGCAAAGAGGATG+AGG | 0.533558 | 5.1:+53101212 | MS.gene43681:CDS |
TGCCATACCAAGGTGTGTGA+AGG | 0.539361 | 5.1:-53100188 | None:intergenic |
CTCAACCATTGAGGACGAGT+TGG | 0.539989 | 5.1:+53104151 | MS.gene43681:CDS |
TGCACTTGAAAATGGTGATA+AGG | 0.547264 | 5.1:+53100134 | MS.gene43681:CDS |
TACTAAAGAAGCTGCTGCGG+TGG | 0.557695 | 5.1:+53099062 | MS.gene43681:CDS |
GGAAAGCAATCCATTTATGA+GGG | 0.558970 | 5.1:+53104172 | MS.gene43681:CDS |
GAATAATTGTCTTCTAGGCA+AGG | 0.561491 | 5.1:-53098928 | None:intergenic |
GTGCCTGGAATCAAGGTCTA+CGG | 0.571178 | 5.1:+53100078 | MS.gene43681:CDS |
TGGCCACAGTAAACTCGAGT+TGG | 0.572496 | 5.1:-53102679 | None:intergenic |
GGCTCAATTGATAATGTCAA+AGG | 0.572860 | 5.1:+53100102 | MS.gene43681:CDS |
GAACTTTCTCGGGTTCAACT+GGG | 0.573905 | 5.1:-53099086 | None:intergenic |
AATAATTGTCTTCTAGGCAA+GGG | 0.575192 | 5.1:-53098927 | None:intergenic |
GCCATACCAAGGTGTGTGAA+GGG | 0.577790 | 5.1:-53100187 | None:intergenic |
AACAATTCCCTCAACCATTG+AGG | 0.581790 | 5.1:+53104142 | MS.gene43681:CDS |
TGGCAAAGAGGATGAGGACC+CGG | 0.591483 | 5.1:+53101218 | MS.gene43681:CDS |
GGTAAGTAACGAACCAGTGA+TGG | 0.595906 | 5.1:-53099161 | None:intergenic |
TTATTATGTTACTGGCAAAG+AGG | 0.617601 | 5.1:+53101206 | MS.gene43681:CDS |
TGGTTGAGGGAATTGTTGGT+TGG | 0.624141 | 5.1:-53104136 | None:intergenic |
AACTTATGTGACCTTTGGTG+TGG | 0.628520 | 5.1:-53101185 | None:intergenic |
GACTACTAAAGAAGCTGCTG+CGG | 0.631494 | 5.1:+53099059 | MS.gene43681:CDS |
AGCTTTAGGAGAATTAAGGA+AGG | 0.648528 | 5.1:+53105030 | MS.gene43681:CDS |
ATGTATTGCAGGAGAAGATG+GGG | 0.651349 | 5.1:+53104990 | MS.gene43681:intron |
GAAGGTGAAAGACAACTGGA+AGG | 0.652875 | 5.1:+53105048 | MS.gene43681:CDS |
AAGGTGAAAGACAACTGGAA+GGG | 0.668349 | 5.1:+53105049 | MS.gene43681:CDS |
TGTGGCAGGGATCATGCTGG+TGG | 0.668772 | 5.1:+53100033 | MS.gene43681:intron |
CCTGGAATCAAGGTCTACGG+TGG | 0.671932 | 5.1:+53100081 | MS.gene43681:CDS |
TAACCTGGGCTCAAAATCAG+CGG | 0.672912 | 5.1:+53104105 | MS.gene43681:CDS |
TCGAGTTTACTGTGGCCATG+AGG | 0.690000 | 5.1:+53102684 | MS.gene43681:CDS |
AAGCCAACTCGAGTTTACTG+TGG | 0.744582 | 5.1:+53102676 | MS.gene43681:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTATATTATATTTAGAC+CGG | + | chr5.1:53100299-53100318 | MS.gene43681:intron | 10.0% |
!!! | AAATATTATTCTTTTACAAT+GGG | + | chr5.1:53100759-53100778 | MS.gene43681:intron | 10.0% |
!!! | AATTTATTTTTGTTTTATCT+TGG | + | chr5.1:53102244-53102263 | MS.gene43681:intron | 10.0% |
!!! | ATTTGCATAAATTTTATTTT+TGG | + | chr5.1:53102474-53102493 | MS.gene43681:intron | 10.0% |
!!! | TAAATATTATTCTTTTACAA+TGG | + | chr5.1:53100758-53100777 | MS.gene43681:intron | 10.0% |
!!! | TTTTAAATATATGTCAATTT+TGG | + | chr5.1:53104766-53104785 | MS.gene43681:intron | 10.0% |
!! | AAAAATAAGCTAAACTTTAT+TGG | + | chr5.1:53099479-53099498 | MS.gene43681:intron | 15.0% |
!! | AATTATATTATATTTAGACC+GGG | + | chr5.1:53100300-53100319 | MS.gene43681:intron | 15.0% |
!! | ATGAAAAAAATTTATTTGGA+AGG | + | chr5.1:53103758-53103777 | MS.gene43681:intron | 15.0% |
!! | ATTGAAATGAAATATATCAT+AGG | + | chr5.1:53102730-53102749 | MS.gene43681:intron | 15.0% |
!! | ATTTACATTAATACATTACA+AGG | - | chr5.1:53104972-53104991 | None:intergenic | 15.0% |
!! | CCTGATAAAATAAATTAAAA+GGG | + | chr5.1:53102440-53102459 | MS.gene43681:intron | 15.0% |
!! | GTTTATTAATCAATGTAAAT+AGG | + | chr5.1:53100730-53100749 | MS.gene43681:intron | 15.0% |
!! | TAAGAATTAAATATGAAGTA+CGG | + | chr5.1:53099773-53099792 | MS.gene43681:intron | 15.0% |
!! | TAAGTTTCCAATTTAATTAA+TGG | + | chr5.1:53102845-53102864 | MS.gene43681:intron | 15.0% |
!! | TCAAAATTAGTTAAAACTTA+TGG | + | chr5.1:53099538-53099557 | MS.gene43681:intron | 15.0% |
!! | TCTTAGTATTAATGATATAA+GGG | - | chr5.1:53103990-53104009 | None:intergenic | 15.0% |
!! | TGACATATATTTAAAAATGA+GGG | - | chr5.1:53104762-53104781 | None:intergenic | 15.0% |
!! | TTGAAATGAAATATATCATA+GGG | + | chr5.1:53102731-53102750 | MS.gene43681:intron | 15.0% |
!! | TTGACATATATTTAAAAATG+AGG | - | chr5.1:53104763-53104782 | None:intergenic | 15.0% |
!! | TTTGCTGAAAAATATATATT+TGG | + | chr5.1:53103703-53103722 | MS.gene43681:intron | 15.0% |
!!! | AATTTTAACATATTTAGAGA+TGG | + | chr5.1:53104594-53104613 | MS.gene43681:intron | 15.0% |
!!! | ACTAATTTGTTACAATAAAA+CGG | + | chr5.1:53101515-53101534 | MS.gene43681:intron | 15.0% |
!!! | ATGAGTTTGTTAAAAATAAT+TGG | - | chr5.1:53100612-53100631 | None:intergenic | 15.0% |
!!! | ATTTTTTATTTTCTCAATCA+GGG | - | chr5.1:53103374-53103393 | None:intergenic | 15.0% |
!!! | TTTTTACTTTTACCAAATTT+TGG | - | chr5.1:53101487-53101506 | None:intergenic | 15.0% |
!! | AAAGTTAAATGACCAAAATT+TGG | + | chr5.1:53101472-53101491 | MS.gene43681:intron | 20.0% |
!! | AAATTCATATATGTGAAGTT+TGG | - | chr5.1:53101966-53101985 | None:intergenic | 20.0% |
!! | AATATGAATAATTGTCTTCT+AGG | - | chr5.1:53098936-53098955 | None:intergenic | 20.0% |
!! | AATGAAAAAGTGAACAAAAA+AGG | - | chr5.1:53098971-53098990 | None:intergenic | 20.0% |
!! | AATGTAGATAAATTAATCGT+AGG | - | chr5.1:53101599-53101618 | None:intergenic | 20.0% |
!! | AATTCATATATGTGAAGTTT+GGG | - | chr5.1:53101965-53101984 | None:intergenic | 20.0% |
!! | ACGAATCTAATTAAATGAAA+AGG | - | chr5.1:53104674-53104693 | None:intergenic | 20.0% |
!! | ATATATTTCATTTCAATGAC+GGG | - | chr5.1:53102727-53102746 | None:intergenic | 20.0% |
!! | ATGTAGATAAATTAATCGTA+GGG | - | chr5.1:53101598-53101617 | None:intergenic | 20.0% |
!! | ATTATCAACCATAACATATA+AGG | - | chr5.1:53101005-53101024 | None:intergenic | 20.0% |
!! | ATTGATTGATAAAGTAAAGA+TGG | - | chr5.1:53100661-53100680 | None:intergenic | 20.0% |
!! | CCAGATGAAAAAAATTTATT+TGG | + | chr5.1:53103754-53103773 | MS.gene43681:intron | 20.0% |
!! | CTAAATAAAAAAATGCCTAA+GGG | - | chr5.1:53101417-53101436 | None:intergenic | 20.0% |
!! | CTCTTAGTATTAATGATATA+AGG | - | chr5.1:53103991-53104010 | None:intergenic | 20.0% |
!! | GATATATTTCATTTCAATGA+CGG | - | chr5.1:53102728-53102747 | None:intergenic | 20.0% |
!! | GCCTGATAAAATAAATTAAA+AGG | + | chr5.1:53102439-53102458 | MS.gene43681:intron | 20.0% |
!! | GGTGAATATAAATAAATTCA+AGG | - | chr5.1:53104370-53104389 | None:intergenic | 20.0% |
!! | TAAATTCGTTGTTAAAAACT+GGG | + | chr5.1:53103333-53103352 | MS.gene43681:intron | 20.0% |
!! | TACTATAATTAAGTTTGTGT+TGG | - | chr5.1:53099645-53099664 | None:intergenic | 20.0% |
!! | TAGAACCAAAAAAAGAAATA+TGG | - | chr5.1:53102161-53102180 | None:intergenic | 20.0% |
!! | TATTAATGTAAATGTATTGC+AGG | + | chr5.1:53104979-53104998 | MS.gene43681:intron | 20.0% |
!! | TCTTTCGTTATTCTTTATTA+TGG | - | chr5.1:53100388-53100407 | None:intergenic | 20.0% |
!! | TGGTAAAAGTAAAAACTTAA+AGG | + | chr5.1:53101492-53101511 | MS.gene43681:intron | 20.0% |
!! | TTAAATTCGTTGTTAAAAAC+TGG | + | chr5.1:53103332-53103351 | MS.gene43681:intron | 20.0% |
!!! | AAAATCAAACGGAAATTTTT+TGG | - | chr5.1:53104736-53104755 | None:intergenic | 20.0% |
!!! | AAAGTGAGAGAATATTTTTT+AGG | + | chr5.1:53104865-53104884 | MS.gene43681:intron | 20.0% |
!!! | AAATCAAACGGAAATTTTTT+GGG | - | chr5.1:53104735-53104754 | None:intergenic | 20.0% |
!!! | AAATTCTAATTTGAAGTGTT+TGG | - | chr5.1:53099185-53099204 | None:intergenic | 20.0% |
!!! | AAGTGAGAGAATATTTTTTA+GGG | + | chr5.1:53104866-53104885 | MS.gene43681:intron | 20.0% |
!!! | AATATTGTAATCTTCACTTT+TGG | + | chr5.1:53104707-53104726 | MS.gene43681:intron | 20.0% |
!!! | AGACAAGTATATAGTTTTAT+TGG | - | chr5.1:53100938-53100957 | None:intergenic | 20.0% |
!!! | AGTGAAGGTATATAAATTTT+AGG | + | chr5.1:53101367-53101386 | MS.gene43681:intron | 20.0% |
!!! | ATTTTCTTGGTTATTTTGTT+TGG | + | chr5.1:53099947-53099966 | MS.gene43681:intron | 20.0% |
!!! | ATTTTGTATTTTCTGTTGAA+GGG | + | chr5.1:53102064-53102083 | MS.gene43681:intron | 20.0% |
!!! | CACATATATGAATTTTTCTA+GGG | + | chr5.1:53101971-53101990 | MS.gene43681:intron | 20.0% |
!!! | CCAAATAAATTTTTTTCATC+TGG | - | chr5.1:53103757-53103776 | None:intergenic | 20.0% |
!!! | CCCTTTTAATTTATTTTATC+AGG | - | chr5.1:53102443-53102462 | None:intergenic | 20.0% |
!!! | GATTTTTTATTTTCTCAATC+AGG | - | chr5.1:53103375-53103394 | None:intergenic | 20.0% |
!!! | TACATTGATTAATAAACGTA+TGG | - | chr5.1:53100727-53100746 | None:intergenic | 20.0% |
!!! | TACTCATTTAGAATCAATTT+AGG | - | chr5.1:53104276-53104295 | None:intergenic | 20.0% |
!!! | TATAGTTTTTCTAGCAAAAA+AGG | + | chr5.1:53103944-53103963 | MS.gene43681:intron | 20.0% |
!!! | TATTTTGTATTTTCTGTTGA+AGG | + | chr5.1:53102063-53102082 | MS.gene43681:intron | 20.0% |
!!! | TCACATATATGAATTTTTCT+AGG | + | chr5.1:53101970-53101989 | MS.gene43681:intron | 20.0% |
!!! | TTAGGCATTTTTTTATTTAG+CGG | + | chr5.1:53101417-53101436 | MS.gene43681:intron | 20.0% |
!!! | TTTGATTGTTTTCATTTTCT+GGG | + | chr5.1:53101886-53101905 | MS.gene43681:intron | 20.0% |
!!! | TTTTGATTGTTTTCATTTTC+TGG | + | chr5.1:53101885-53101904 | MS.gene43681:intron | 20.0% |
!!! | TTTTTTTTTTTTGCAGTACT+CGG | + | chr5.1:53104022-53104041 | MS.gene43681:intron | 20.0% |
! | AAAAGAAATATGGACTCAAA+AGG | - | chr5.1:53102151-53102170 | None:intergenic | 25.0% |
! | AAAATCCGTCATTTCTTTAT+AGG | + | chr5.1:53103389-53103408 | MS.gene43681:intron | 25.0% |
! | AAAGTAAAGATGGATATTAG+TGG | - | chr5.1:53100651-53100670 | None:intergenic | 25.0% |
! | AACTAGTATTAGATCTTGTT+TGG | - | chr5.1:53099717-53099736 | None:intergenic | 25.0% |
! | AATTTCATATTGGGCTAAAT+GGG | - | chr5.1:53104924-53104943 | None:intergenic | 25.0% |
! | ACAAGATCTAATACTAGTTA+AGG | + | chr5.1:53099718-53099737 | MS.gene43681:intron | 25.0% |
! | ACATCAAAATTGATGAAAGA+TGG | - | chr5.1:53101697-53101716 | None:intergenic | 25.0% |
! | AGCATGGTATAATTTCATAT+TGG | - | chr5.1:53104934-53104953 | None:intergenic | 25.0% |
! | ATAAGCCTATAAAGAAATGA+CGG | - | chr5.1:53103397-53103416 | None:intergenic | 25.0% |
! | ATAATAACTTATGTGACCTT+TGG | - | chr5.1:53101193-53101212 | None:intergenic | 25.0% |
! | ATAATATCACCATAAAAGCA+AGG | - | chr5.1:53100908-53100927 | None:intergenic | 25.0% |
! | ATTTAATTAATGGAGATGTC+AGG | + | chr5.1:53102855-53102874 | MS.gene43681:intron | 25.0% |
! | CAAAAAACAAAGTCTAACAA+AGG | - | chr5.1:53101750-53101769 | None:intergenic | 25.0% |
! | CACATAAGTTATTATGTTAC+TGG | + | chr5.1:53101198-53101217 | MS.gene43681:CDS | 25.0% |
! | CATGTAAGAAACTTAAAGAT+GGG | + | chr5.1:53101332-53101351 | MS.gene43681:intron | 25.0% |
! | GACATCTCCATTAATTAAAT+TGG | - | chr5.1:53102855-53102874 | None:intergenic | 25.0% |
! | GCATGGTATAATTTCATATT+GGG | - | chr5.1:53104933-53104952 | None:intergenic | 25.0% |
! | GCTAAATAAAAAAATGCCTA+AGG | - | chr5.1:53101418-53101437 | None:intergenic | 25.0% |
! | GTCTATATCTATGAATGAAT+TGG | + | chr5.1:53099005-53099024 | MS.gene43681:intron | 25.0% |
! | GTGATGAGAATAAATGTTAT+TGG | + | chr5.1:53102007-53102026 | MS.gene43681:intron | 25.0% |
! | TAACTTTCATAACACTAATG+AGG | - | chr5.1:53101459-53101478 | None:intergenic | 25.0% |
! | TAATTTCATATTGGGCTAAA+TGG | - | chr5.1:53104925-53104944 | None:intergenic | 25.0% |
! | TATATTTCATTTCAATGACG+GGG | - | chr5.1:53102726-53102745 | None:intergenic | 25.0% |
! | TATTATTCATAAGCTTGTCA+AGG | - | chr5.1:53099416-53099435 | None:intergenic | 25.0% |
! | TCTTTAGCACAAATCTTAAT+TGG | - | chr5.1:53100815-53100834 | None:intergenic | 25.0% |
! | TTAATCAATGTAAATAGGTC+AGG | + | chr5.1:53100735-53100754 | MS.gene43681:intron | 25.0% |
! | TTATGCACAATCATAACTTA+TGG | - | chr5.1:53102384-53102403 | None:intergenic | 25.0% |
! | TTCTTTATAGTACACTTCTT+TGG | + | chr5.1:53103680-53103699 | MS.gene43681:intron | 25.0% |
!! | AAGAAGTTCACAATATTTTG+TGG | - | chr5.1:53103008-53103027 | None:intergenic | 25.0% |
!! | AGTAGGATAATTATTCCTTT+TGG | + | chr5.1:53103435-53103454 | MS.gene43681:intron | 25.0% |
!! | CGAATTTAACTTTGAATTCT+AGG | - | chr5.1:53103321-53103340 | None:intergenic | 25.0% |
!! | CTTTAAGTTAGAATCAATTG+TGG | - | chr5.1:53104315-53104334 | None:intergenic | 25.0% |
!! | GAGAATAAATGTTATTGGTT+TGG | + | chr5.1:53102012-53102031 | MS.gene43681:intron | 25.0% |
!! | GTATATCAATGATAGTGAAA+TGG | + | chr5.1:53100431-53100450 | MS.gene43681:intron | 25.0% |
!! | TAAACATTTGAGATAGCTTA+TGG | - | chr5.1:53099582-53099601 | None:intergenic | 25.0% |
!! | TGGAGCAGATATTAATATTT+TGG | + | chr5.1:53100164-53100183 | MS.gene43681:CDS | 25.0% |
!! | TTTTGTATTTTCTGTTGAAG+GGG | + | chr5.1:53102065-53102084 | MS.gene43681:intron | 25.0% |
!!! | AAATTTTTTTCATCTGGCAA+AGG | - | chr5.1:53103751-53103770 | None:intergenic | 25.0% |
!!! | AATCAAACGGAAATTTTTTG+GGG | - | chr5.1:53104734-53104753 | None:intergenic | 25.0% |
!!! | AATTTTTTTCATCTGGCAAA+GGG | - | chr5.1:53103750-53103769 | None:intergenic | 25.0% |
!!! | CTTTGTTAGACTTTGTTTTT+TGG | + | chr5.1:53101748-53101767 | MS.gene43681:intron | 25.0% |
!!! | TATTTTTTGTCTCTCAAAGT+AGG | + | chr5.1:53103418-53103437 | MS.gene43681:intron | 25.0% |
!!! | TGAGTCCATATTTCTTTTTT+TGG | + | chr5.1:53102153-53102172 | MS.gene43681:intron | 25.0% |
!!! | TGGTTATTATTCATTTTTGC+AGG | + | chr5.1:53099025-53099044 | MS.gene43681:intron | 25.0% |
!!! | TGTTCACTTTTTCATTTTCT+GGG | + | chr5.1:53098975-53098994 | MS.gene43681:intron | 25.0% |
!!! | TTGTTCACTTTTTCATTTTC+TGG | + | chr5.1:53098974-53098993 | MS.gene43681:intron | 25.0% |
!!! | TTTTTTGGTTCTATAGTTCT+TGG | + | chr5.1:53102168-53102187 | MS.gene43681:intron | 25.0% |
AAACCAATAATGCAACTTTG+AGG | + | chr5.1:53103894-53103913 | MS.gene43681:intron | 30.0% | |
AAACGAGAAGATAAAGGAAT+TGG | + | chr5.1:53100056-53100075 | MS.gene43681:CDS | 30.0% | |
AAAGAGAATATGTGCATGTT+TGG | + | chr5.1:53099295-53099314 | MS.gene43681:intron | 30.0% | |
AAATGGGGAATGATTTAGTA+TGG | + | chr5.1:53102350-53102369 | MS.gene43681:intron | 30.0% | |
AACAAATAGATCCTTGTTGA+TGG | + | chr5.1:53104504-53104523 | MS.gene43681:intron | 30.0% | |
AACCAATAATGCAACTTTGA+GGG | + | chr5.1:53103895-53103914 | MS.gene43681:intron | 30.0% | |
AATAATTGTCTTCTAGGCAA+GGG | - | chr5.1:53098930-53098949 | None:intergenic | 30.0% | |
AATGAGGGATCAAAATCAAA+CGG | - | chr5.1:53104747-53104766 | None:intergenic | 30.0% | |
ACAAATAGATCCTTGTTGAT+GGG | + | chr5.1:53104505-53104524 | MS.gene43681:intron | 30.0% | |
AGAATACTAAACAATACCAG+AGG | - | chr5.1:53101066-53101085 | None:intergenic | 30.0% | |
ATCGTAGGGTTAATCTTTAT+TGG | - | chr5.1:53101584-53101603 | None:intergenic | 30.0% | |
ATGAGAAGAAGATTGTGTAA+GGG | - | chr5.1:53101638-53101657 | None:intergenic | 30.0% | |
ATGGTTTATGTTAACAAGAG+AGG | - | chr5.1:53101148-53101167 | None:intergenic | 30.0% | |
ATGTTAACAAGAGAGGTTAA+AGG | - | chr5.1:53101141-53101160 | None:intergenic | 30.0% | |
ATTTAATCAAAGAGAGAACG+TGG | + | chr5.1:53099873-53099892 | MS.gene43681:intron | 30.0% | |
CCAAACTAAAACTTTATCAG+TGG | + | chr5.1:53101835-53101854 | MS.gene43681:intron | 30.0% | |
GAAACAGTATTCACGATTAA+TGG | - | chr5.1:53103266-53103285 | None:intergenic | 30.0% | |
GAATACACTGATGTAAAAGT+GGG | - | chr5.1:53104391-53104410 | None:intergenic | 30.0% | |
GACTTATGAACAACTCATTT+AGG | - | chr5.1:53099619-53099638 | None:intergenic | 30.0% | |
GATACATACACACAGAAATA+TGG | - | chr5.1:53102219-53102238 | None:intergenic | 30.0% | |
GATACTGGAAAAATTAACCT+GGG | + | chr5.1:53104091-53104110 | MS.gene43681:CDS | 30.0% | |
GCATGTAAGAAACTTAAAGA+TGG | + | chr5.1:53101331-53101350 | MS.gene43681:intron | 30.0% | |
GTTAATAATTATCACTCCTC+TGG | + | chr5.1:53101047-53101066 | MS.gene43681:intron | 30.0% | |
TAGACAAAACAATTAAGTCC+CGG | - | chr5.1:53100321-53100340 | None:intergenic | 30.0% | |
TGAACTTCTTGAGATATTAG+TGG | + | chr5.1:53103018-53103037 | MS.gene43681:intron | 30.0% | |
TGAATACACTGATGTAAAAG+TGG | - | chr5.1:53104392-53104411 | None:intergenic | 30.0% | |
TGTAAACTGGTAAACATCTT+GGG | + | chr5.1:53103079-53103098 | MS.gene43681:intron | 30.0% | |
TGTTAACAAGAGAGGTTAAA+GGG | - | chr5.1:53101140-53101159 | None:intergenic | 30.0% | |
TGTTTGATTGCAAAGATACT+GGG | + | chr5.1:53102946-53102965 | MS.gene43681:intron | 30.0% | |
TTAACAACCAACAATTCCTT+GGG | - | chr5.1:53103057-53103076 | None:intergenic | 30.0% | |
TTACACTTTACTCACTTTAG+AGG | - | chr5.1:53100547-53100566 | None:intergenic | 30.0% | |
TTATTATGTTACTGGCAAAG+AGG | + | chr5.1:53101206-53101225 | MS.gene43681:CDS | 30.0% | |
TTATTTAGCGGAAACTCATA+AGG | + | chr5.1:53101429-53101448 | MS.gene43681:intron | 30.0% | |
TTGACAATTAAGACTCTTGT+TGG | + | chr5.1:53100218-53100237 | MS.gene43681:intron | 30.0% | |
TTGTAAACTGGTAAACATCT+TGG | + | chr5.1:53103078-53103097 | MS.gene43681:intron | 30.0% | |
TTGTTTGATTGCAAAGATAC+TGG | + | chr5.1:53102945-53102964 | MS.gene43681:intron | 30.0% | |
! | AACAATAACCAGCCTATTTT+TGG | + | chr5.1:53103635-53103654 | MS.gene43681:intron | 30.0% |
! | ACAAAAGTTTCGTCGTATTT+TGG | - | chr5.1:53103604-53103623 | None:intergenic | 30.0% |
! | AGTTCACAATATTTTGTGGA+AGG | - | chr5.1:53103004-53103023 | None:intergenic | 30.0% |
! | CTTTGACAATGTGTCAATTT+TGG | - | chr5.1:53104849-53104868 | None:intergenic | 30.0% |
! | GTATTCTATCTTTTATGCAG+TGG | + | chr5.1:53101079-53101098 | MS.gene43681:intron | 30.0% |
! | GTGATTTTTGTGTGATTTTG+TGG | + | chr5.1:53100015-53100034 | MS.gene43681:intron | 30.0% |
! | TATCAATGATAGTGAAATGG+TGG | + | chr5.1:53100434-53100453 | MS.gene43681:intron | 30.0% |
! | TGAAAACAGTTGCATTTTCT+TGG | + | chr5.1:53099934-53099953 | MS.gene43681:intron | 30.0% |
! | TTGGTTGTTAAGTTGTAAAC+TGG | + | chr5.1:53103066-53103085 | MS.gene43681:intron | 30.0% |
!! | ACAAATTGAGTTCTGAATTC+AGG | + | chr5.1:53103239-53103258 | MS.gene43681:intron | 30.0% |
!! | ACAATAACCAGCCTATTTTT+GGG | + | chr5.1:53103636-53103655 | MS.gene43681:intron | 30.0% |
!! | CAAATTGAGTTCTGAATTCA+GGG | + | chr5.1:53103240-53103259 | MS.gene43681:intron | 30.0% |
!! | TGTTTTTACTGGAGATACAT+TGG | + | chr5.1:53101242-53101261 | MS.gene43681:CDS | 30.0% |
!! | TTCAAGCTTTAGGAGAATTA+AGG | + | chr5.1:53105026-53105045 | MS.gene43681:CDS | 30.0% |
!!! | ATTTTTCTAGGGTTTTGTAG+AGG | + | chr5.1:53101982-53102001 | MS.gene43681:intron | 30.0% |
!!! | CCACTGATAAAGTTTTAGTT+TGG | - | chr5.1:53101838-53101857 | None:intergenic | 30.0% |
!!! | TGTATGTTTGGTTCTAGTTT+TGG | + | chr5.1:53104245-53104264 | MS.gene43681:intron | 30.0% |
AAACAGAAGTCGAGAACAAT+TGG | - | chr5.1:53100875-53100894 | None:intergenic | 35.0% | |
AAAGATATTGAGGGTCCAAA+AGG | - | chr5.1:53103453-53103472 | None:intergenic | 35.0% | |
AAATGTATTGCAGGAGAAGA+TGG | + | chr5.1:53104988-53105007 | MS.gene43681:intron | 35.0% | |
AATATGAAGTACGGTGTGTT+TGG | + | chr5.1:53099782-53099801 | MS.gene43681:intron | 35.0% | |
AATGTATTGCAGGAGAAGAT+GGG | + | chr5.1:53104989-53105008 | MS.gene43681:intron | 35.0% | |
AATTACAAAGCCTCGACTTT+AGG | - | chr5.1:53100268-53100287 | None:intergenic | 35.0% | |
AATTCACCAGTTCAAGCTTT+AGG | + | chr5.1:53105016-53105035 | MS.gene43681:CDS | 35.0% | |
AATTCTCCTAAAGCTTGAAC+TGG | - | chr5.1:53105025-53105044 | None:intergenic | 35.0% | |
ACCAAACATACACTTAGAAG+AGG | - | chr5.1:53104237-53104256 | None:intergenic | 35.0% | |
ACTTCTTGAGATATTAGTGG+TGG | + | chr5.1:53103021-53103040 | MS.gene43681:intron | 35.0% | |
AGATGACTATGCTATTCAAC+AGG | - | chr5.1:53103165-53103184 | None:intergenic | 35.0% | |
AGGCTGAAGAAAAGATATTG+AGG | - | chr5.1:53103463-53103482 | None:intergenic | 35.0% | |
ATGAAAGATGGCCATATGTA+AGG | - | chr5.1:53101685-53101704 | None:intergenic | 35.0% | |
ATTAATGGAGATGTCAGGAT+TGG | + | chr5.1:53102860-53102879 | MS.gene43681:intron | 35.0% | |
ATTACAAAGCCTCGACTTTA+GGG | - | chr5.1:53100267-53100286 | None:intergenic | 35.0% | |
ATTTGTTTCACACCTGTGTT+TGG | - | chr5.1:53104491-53104510 | None:intergenic | 35.0% | |
CAAGATGCTAAAAGAATTCG+GGG | - | chr5.1:53102978-53102997 | None:intergenic | 35.0% | |
CAATTGAGCCAGACAATTTA+AGG | + | chr5.1:53104069-53104088 | MS.gene43681:CDS | 35.0% | |
CATATGAACACCCTTACATA+TGG | + | chr5.1:53101671-53101690 | MS.gene43681:intron | 35.0% | |
CCAAGATGCTAAAAGAATTC+GGG | - | chr5.1:53102979-53102998 | None:intergenic | 35.0% | |
CCCAAGATGCTAAAAGAATT+CGG | - | chr5.1:53102980-53102999 | None:intergenic | 35.0% | |
CGACATTCAAATATTATGCG+TGG | - | chr5.1:53100501-53100520 | None:intergenic | 35.0% | |
CTTAACAACCAACAATTCCT+TGG | - | chr5.1:53103058-53103077 | None:intergenic | 35.0% | |
CTTCAGAAAAGAGAGATCAA+AGG | - | chr5.1:53103483-53103502 | None:intergenic | 35.0% | |
GAAACACTTCACATTAAGCA+TGG | - | chr5.1:53104950-53104969 | None:intergenic | 35.0% | |
GAAGCTCATTTGTGCAAAAT+TGG | + | chr5.1:53103827-53103846 | MS.gene43681:intron | 35.0% | |
GAATAATTGTCTTCTAGGCA+AGG | - | chr5.1:53098931-53098950 | None:intergenic | 35.0% | |
GATGAGAAGAAGATTGTGTA+AGG | - | chr5.1:53101639-53101658 | None:intergenic | 35.0% | |
GGAAAGCAATCCATTTATGA+GGG | + | chr5.1:53104172-53104191 | MS.gene43681:CDS | 35.0% | |
GGATACTGGAAAAATTAACC+TGG | + | chr5.1:53104090-53104109 | MS.gene43681:CDS | 35.0% | |
GGCTATGAAAATCAGAGAAA+TGG | - | chr5.1:53101167-53101186 | None:intergenic | 35.0% | |
GGCTGAAGAAAAGATATTGA+GGG | - | chr5.1:53103462-53103481 | None:intergenic | 35.0% | |
GTACTTGAAAGCTTAAGTTC+CGG | - | chr5.1:53101928-53101947 | None:intergenic | 35.0% | |
GTTCTCATTCATTCAACAGT+TGG | + | chr5.1:53102908-53102927 | MS.gene43681:intron | 35.0% | |
TCCAGTATCCTTAAATTGTC+TGG | - | chr5.1:53104080-53104099 | None:intergenic | 35.0% | |
TCCTCTTCTAAGTGTATGTT+TGG | + | chr5.1:53104233-53104252 | MS.gene43681:intron | 35.0% | |
TCCTGAAATGATCACACAAT+TGG | - | chr5.1:53103573-53103592 | None:intergenic | 35.0% | |
TCTTCTTTACAGTTCATTGC+TGG | + | chr5.1:53102580-53102599 | MS.gene43681:intron | 35.0% | |
TGAAAGATGGCCATATGTAA+GGG | - | chr5.1:53101684-53101703 | None:intergenic | 35.0% | |
TGATTTCAGTCCCCAAAAAT+AGG | - | chr5.1:53103650-53103669 | None:intergenic | 35.0% | |
TGCACTTGAAAATGGTGATA+AGG | + | chr5.1:53100134-53100153 | MS.gene43681:CDS | 35.0% | |
TGGAAAGCAATCCATTTATG+AGG | + | chr5.1:53104171-53104190 | MS.gene43681:CDS | 35.0% | |
TGTGATCATTTCAGGAAAGA+GGG | + | chr5.1:53103577-53103596 | MS.gene43681:intron | 35.0% | |
TGTTCATATGGACATGACTA+AGG | - | chr5.1:53101661-53101680 | None:intergenic | 35.0% | |
TTCAGAACTCAATTTGTGAC+AGG | - | chr5.1:53103236-53103255 | None:intergenic | 35.0% | |
TTCCCTCAAAGTTGCATTAT+TGG | - | chr5.1:53103900-53103919 | None:intergenic | 35.0% | |
TTGTTACAATAAAACGGCGA+AGG | + | chr5.1:53101521-53101540 | MS.gene43681:intron | 35.0% | |
! | AACTTCATCGGTCTAAAATG+AGG | - | chr5.1:53104815-53104834 | None:intergenic | 35.0% |
! | AATACGACGAAACTTTTGTG+AGG | + | chr5.1:53103605-53103624 | MS.gene43681:intron | 35.0% |
! | ACTTCATCGGTCTAAAATGA+GGG | - | chr5.1:53104814-53104833 | None:intergenic | 35.0% |
! | ATACGACGAAACTTTTGTGA+GGG | + | chr5.1:53103606-53103625 | MS.gene43681:intron | 35.0% |
! | CCGAATTCTTTTAGCATCTT+GGG | + | chr5.1:53102977-53102996 | MS.gene43681:intron | 35.0% |
! | CTTGAGTATGTTTTACCTCA+TGG | - | chr5.1:53102702-53102721 | None:intergenic | 35.0% |
! | GGAAGGAAGTATAATGCAAT+AGG | + | chr5.1:53103775-53103794 | MS.gene43681:intron | 35.0% |
! | GGAAGTATAATGCAATAGGT+AGG | + | chr5.1:53103779-53103798 | MS.gene43681:intron | 35.0% |
! | GGTTTACGTAGCTAAGTTTT+TGG | + | chr5.1:53104787-53104806 | MS.gene43681:intron | 35.0% |
! | TAAAGTCGAGGCTTTGTAAT+TGG | + | chr5.1:53100267-53100286 | MS.gene43681:intron | 35.0% |
! | TGTACTGATGCACTTGAAAA+TGG | + | chr5.1:53100126-53100145 | MS.gene43681:CDS | 35.0% |
! | TTTTATCTTGGTCTCTGTCA+TGG | + | chr5.1:53102256-53102275 | MS.gene43681:intron | 35.0% |
! | TTTTGTGTGATTTTGTGGCA+GGG | + | chr5.1:53100020-53100039 | MS.gene43681:intron | 35.0% |
! | TTTTTGTGTGATTTTGTGGC+AGG | + | chr5.1:53100019-53100038 | MS.gene43681:intron | 35.0% |
!! | AAATTTTAGGCTTGCTTCTG+TGG | + | chr5.1:53101380-53101399 | MS.gene43681:intron | 35.0% |
!! | AGAAGCTTCTAGAACTTTCT+CGG | - | chr5.1:53099100-53099119 | None:intergenic | 35.0% |
!! | AGCTTTAGGAGAATTAAGGA+AGG | + | chr5.1:53105030-53105049 | MS.gene43681:CDS | 35.0% |
!! | ATTTTCTGGGAAATGACTCA+TGG | + | chr5.1:53101899-53101918 | MS.gene43681:intron | 35.0% |
!! | CATATGTAAGGGTGTTCATA+TGG | - | chr5.1:53101673-53101692 | None:intergenic | 35.0% |
!! | GGCTCAATTGATAATGTCAA+AGG | + | chr5.1:53100102-53100121 | MS.gene43681:CDS | 35.0% |
!! | TTCACTGGCCTTATATGTTA+TGG | + | chr5.1:53100994-53101013 | MS.gene43681:intron | 35.0% |
!!! | ATGTTTGGTTCTAGTTTTGG+AGG | + | chr5.1:53104248-53104267 | MS.gene43681:intron | 35.0% |
!!! | CAATAACCAGCCTATTTTTG+GGG | + | chr5.1:53103637-53103656 | MS.gene43681:intron | 35.0% |
!!! | GGTTGTGGGAAATTTTTTGA+AGG | + | chr5.1:53102601-53102620 | MS.gene43681:CDS | 35.0% |
!!! | GGTTTGGTTTTGTATTTGAG+TGG | + | chr5.1:53102028-53102047 | MS.gene43681:intron | 35.0% |
!!! | GTTTGCTGCTTTAGTTTTGA+GGG | + | chr5.1:53099977-53099996 | MS.gene43681:intron | 35.0% |
!!! | TGTTTGCTGCTTTAGTTTTG+AGG | + | chr5.1:53099976-53099995 | MS.gene43681:intron | 35.0% |
!!! | TTTGCTGCTTTAGTTTTGAG+GGG | + | chr5.1:53099978-53099997 | MS.gene43681:intron | 35.0% |
AAACAACGTGTTCTCAGTTC+TGG | - | chr5.1:53100971-53100990 | None:intergenic | 40.0% | |
AACAACGTGTTCTCAGTTCT+GGG | - | chr5.1:53100970-53100989 | None:intergenic | 40.0% | |
AACAATTCCCTCAACCATTG+AGG | + | chr5.1:53104142-53104161 | MS.gene43681:CDS | 40.0% | |
AACTTATGTGACCTTTGGTG+TGG | - | chr5.1:53101188-53101207 | None:intergenic | 40.0% | |
AAGGTGAAAGACAACTGGAA+GGG | + | chr5.1:53105049-53105068 | MS.gene43681:CDS | 40.0% | |
AATGGTGATAAGGTGCATCT+TGG | + | chr5.1:53100144-53100163 | MS.gene43681:CDS | 40.0% | |
ACATACACTTAGAAGAGGAG+TGG | - | chr5.1:53104232-53104251 | None:intergenic | 40.0% | |
ACTTAGAAGAGGAGTGGAAA+AGG | - | chr5.1:53104226-53104245 | None:intergenic | 40.0% | |
AGATACTAAGCTGCAACTCA+GGG | + | chr5.1:53104645-53104664 | MS.gene43681:intron | 40.0% | |
ATCCCTCTCAATCGTAAAAG+AGG | + | chr5.1:53103513-53103532 | MS.gene43681:intron | 40.0% | |
ATCCTTTAGCAATCCCTTCT+GGG | + | chr5.1:53104545-53104564 | MS.gene43681:intron | 40.0% | |
ATCTCTGTACTCTTTCGGTA+AGG | - | chr5.1:53103547-53103566 | None:intergenic | 40.0% | |
ATGTATTGCAGGAGAAGATG+GGG | + | chr5.1:53104990-53105009 | MS.gene43681:intron | 40.0% | |
CAGTCACTCTCTGTAACATT+AGG | + | chr5.1:53102643-53102662 | MS.gene43681:CDS | 40.0% | |
CTAATGTGCACAATCACACT+AGG | - | chr5.1:53102414-53102433 | None:intergenic | 40.0% | |
CTAGAAGCTTCTAATTCGCT+TGG | + | chr5.1:53099108-53099127 | MS.gene43681:CDS | 40.0% | |
GACAGGAATTGAGTGTCAAT+CGG | - | chr5.1:53103219-53103238 | None:intergenic | 40.0% | |
GAGCAGATGAAAGTAGTTAG+TGG | - | chr5.1:53102806-53102825 | None:intergenic | 40.0% | |
GCCAATTGTGTGATCATTTC+AGG | + | chr5.1:53103569-53103588 | MS.gene43681:intron | 40.0% | |
GCCAGACAATTTAAGGATAC+TGG | + | chr5.1:53104076-53104095 | MS.gene43681:CDS | 40.0% | |
GCTTGCATAAGTAAAGCATG+TGG | + | chr5.1:53101547-53101566 | MS.gene43681:intron | 40.0% | |
GGCATATCTCTGTACTCTTT+CGG | - | chr5.1:53103552-53103571 | None:intergenic | 40.0% | |
GGTAAAAACTGGGAAATGTG+AGG | + | chr5.1:53103124-53103143 | MS.gene43681:intron | 40.0% | |
GGTAGATCAACCCTCATAAA+TGG | - | chr5.1:53104185-53104204 | None:intergenic | 40.0% | |
GGTTAAAGGGTCTGGATAAA+AGG | - | chr5.1:53101127-53101146 | None:intergenic | 40.0% | |
GTACTCTTTCGGTAAGGTTT+AGG | - | chr5.1:53103541-53103560 | None:intergenic | 40.0% | |
GTATCTCCAGTAAAAACAGC+CGG | - | chr5.1:53101240-53101259 | None:intergenic | 40.0% | |
GTGTGATCATTTCAGGAAAG+AGG | + | chr5.1:53103576-53103595 | MS.gene43681:intron | 40.0% | |
TAAGGAAGGTGAAAGACAAC+TGG | + | chr5.1:53105044-53105063 | MS.gene43681:CDS | 40.0% | |
TAAGTAAAGCATGTGGTGTG+TGG | + | chr5.1:53101554-53101573 | MS.gene43681:intron | 40.0% | |
TAGATACTAAGCTGCAACTC+AGG | + | chr5.1:53104644-53104663 | MS.gene43681:intron | 40.0% | |
TATCCTTTAGCAATCCCTTC+TGG | + | chr5.1:53104544-53104563 | MS.gene43681:intron | 40.0% | |
TATCTCCAGTAAAAACAGCC+GGG | - | chr5.1:53101239-53101258 | None:intergenic | 40.0% | |
TCAATGGTTGAGGGAATTGT+TGG | - | chr5.1:53104143-53104162 | None:intergenic | 40.0% | |
TCCCTCTCAATCGTAAAAGA+GGG | + | chr5.1:53103514-53103533 | MS.gene43681:intron | 40.0% | |
TCTATAGTTCTTGGTTGCTG+AGG | + | chr5.1:53102177-53102196 | MS.gene43681:intron | 40.0% | |
TGATTCCATGCTAAACAAGC+TGG | - | chr5.1:53101777-53101796 | None:intergenic | 40.0% | |
TGGTGGAAACGAGAAGATAA+AGG | + | chr5.1:53100050-53100069 | MS.gene43681:CDS | 40.0% | |
TGTACTACCCAAGGAATTGT+TGG | + | chr5.1:53103047-53103066 | MS.gene43681:intron | 40.0% | |
TGTTCTCGACTTCTGTTTAG+AGG | + | chr5.1:53100877-53100896 | MS.gene43681:intron | 40.0% | |
TGTTTAGCATGGAATCACGT+TGG | + | chr5.1:53101780-53101799 | MS.gene43681:intron | 40.0% | |
TTGATGTGATCGTCATCTGT+CGG | + | chr5.1:53101710-53101729 | MS.gene43681:intron | 40.0% | |
! | AAGATAAAGGAATTGGTGCC+TGG | + | chr5.1:53100063-53100082 | MS.gene43681:CDS | 40.0% |
! | ATAGATCCTTGTTGATGGGA+AGG | + | chr5.1:53104509-53104528 | MS.gene43681:intron | 40.0% |
! | ATTTTCCAGTATACCCCAGA+AGG | - | chr5.1:53104562-53104581 | None:intergenic | 40.0% |
! | CAGTGGCTTTTGTAGATTGA+AGG | + | chr5.1:53101852-53101871 | MS.gene43681:intron | 40.0% |
! | CCCGAATTCTTTTAGCATCT+TGG | + | chr5.1:53102976-53102995 | MS.gene43681:intron | 40.0% |
! | GATTTTCATAGCCACACCAA+AGG | + | chr5.1:53101174-53101193 | MS.gene43681:intron | 40.0% |
! | TAATGCAACTTTGAGGGAAG+AGG | + | chr5.1:53103901-53103920 | MS.gene43681:intron | 40.0% |
! | TACAGTTCATTGCTGGTTGT+GGG | + | chr5.1:53102587-53102606 | MS.gene43681:intron | 40.0% |
! | TCCCTCTTTTACGATTGAGA+GGG | - | chr5.1:53103518-53103537 | None:intergenic | 40.0% |
! | TGCGGTGTTAGGTAAAAACT+GGG | + | chr5.1:53103114-53103133 | MS.gene43681:intron | 40.0% |
! | TTACAGTTCATTGCTGGTTG+TGG | + | chr5.1:53102586-53102605 | MS.gene43681:intron | 40.0% |
! | TTGCGGTGTTAGGTAAAAAC+TGG | + | chr5.1:53103113-53103132 | MS.gene43681:intron | 40.0% |
! | TTTTCCAGTATACCCCAGAA+GGG | - | chr5.1:53104561-53104580 | None:intergenic | 40.0% |
!! | AACACGTTGTTTTGCTTCAC+TGG | + | chr5.1:53100979-53100998 | MS.gene43681:intron | 40.0% |
!! | AAGAAGTTGATGGTGTGGAT+TGG | + | chr5.1:53102091-53102110 | MS.gene43681:intron | 40.0% |
!! | GAAGCTTCTAGAACTTTCTC+GGG | - | chr5.1:53099099-53099118 | None:intergenic | 40.0% |
!!! | GAGGTTTAGCCTTGCTTTTA+TGG | + | chr5.1:53100896-53100915 | MS.gene43681:intron | 40.0% |
AAATGCCTAAGGGCCATTGA+AGG | - | chr5.1:53101407-53101426 | None:intergenic | 45.0% | |
AACTCGTCCTCAATGGTTGA+GGG | - | chr5.1:53104152-53104171 | None:intergenic | 45.0% | |
AAGCCAACTCGAGTTTACTG+TGG | + | chr5.1:53102676-53102695 | MS.gene43681:CDS | 45.0% | |
ACAAGAGAGGTTAAAGGGTC+TGG | - | chr5.1:53101135-53101154 | None:intergenic | 45.0% | |
ACCTGTGTTTGGATCTGTAG+TGG | - | chr5.1:53104480-53104499 | None:intergenic | 45.0% | |
AGAACTTTCTCGGGTTCAAC+TGG | - | chr5.1:53099090-53099109 | None:intergenic | 45.0% | |
ATGTGCACAATCACACTAGG+TGG | - | chr5.1:53102411-53102430 | None:intergenic | 45.0% | |
CACGTTGGAACTGATGTAGA+CGG | + | chr5.1:53101795-53101814 | MS.gene43681:intron | 45.0% | |
GAACTTTCTCGGGTTCAACT+GGG | - | chr5.1:53099089-53099108 | None:intergenic | 45.0% | |
GAAGGGGAAGAAGAAGTTGA+TGG | + | chr5.1:53102081-53102100 | MS.gene43681:intron | 45.0% | |
GAAGGTGAAAGACAACTGGA+AGG | + | chr5.1:53105048-53105067 | MS.gene43681:CDS | 45.0% | |
GACTACTAAAGAAGCTGCTG+CGG | + | chr5.1:53099059-53099078 | MS.gene43681:CDS | 45.0% | |
GGTAAGTAACGAACCAGTGA+TGG | - | chr5.1:53099164-53099183 | None:intergenic | 45.0% | |
GGTTGATCTACCTGTAATCC+AGG | + | chr5.1:53104193-53104212 | MS.gene43681:CDS | 45.0% | |
GTCGTTGCTGCTAACTTCAT+CGG | - | chr5.1:53104827-53104846 | None:intergenic | 45.0% | |
TAACCTGGGCTCAAAATCAG+CGG | + | chr5.1:53104105-53104124 | MS.gene43681:CDS | 45.0% | |
TAATAGACAACCTCCAGCAC+AGG | - | chr5.1:53103293-53103312 | None:intergenic | 45.0% | |
TACTGTTTCCTTACCTGTGC+TGG | + | chr5.1:53103277-53103296 | MS.gene43681:intron | 45.0% | |
TATCTTGGTCTCTGTCATGG+TGG | + | chr5.1:53102259-53102278 | MS.gene43681:intron | 45.0% | |
TCCTTACTACTCACCATCAC+TGG | + | chr5.1:53099148-53099167 | MS.gene43681:CDS | 45.0% | |
TCCTTTAGCAATCCCTTCTG+GGG | + | chr5.1:53104546-53104565 | MS.gene43681:intron | 45.0% | |
TGCAATAGGTAGGCACTCAT+TGG | + | chr5.1:53103789-53103808 | MS.gene43681:intron | 45.0% | |
TGGTTGAGGGAATTGTTGGT+TGG | - | chr5.1:53104139-53104158 | None:intergenic | 45.0% | |
TGTTACTGGCAAAGAGGATG+AGG | + | chr5.1:53101212-53101231 | MS.gene43681:CDS | 45.0% | |
TTCAGTCCCCAAAAATAGGC+TGG | - | chr5.1:53103646-53103665 | None:intergenic | 45.0% | |
TTGCTTCTGTGGTCCTTCAA+TGG | + | chr5.1:53101391-53101410 | MS.gene43681:intron | 45.0% | |
TTTACCTAACACCGCAAGCA+TGG | - | chr5.1:53103110-53103129 | None:intergenic | 45.0% | |
TTTGCTCCTTCCCATCAACA+AGG | - | chr5.1:53104518-53104537 | None:intergenic | 45.0% | |
! | ACCAGTGATGGTGAGTAGTA+AGG | - | chr5.1:53099152-53099171 | None:intergenic | 45.0% |
! | CAAGTTGAGTTGCCATACCA+AGG | - | chr5.1:53100201-53100220 | None:intergenic | 45.0% |
! | GGAATCCAGCTTGTTTAGCA+TGG | + | chr5.1:53101769-53101788 | MS.gene43681:intron | 45.0% |
! | GTCCCTCTTTTACGATTGAG+AGG | - | chr5.1:53103519-53103538 | None:intergenic | 45.0% |
! | TTCTGGGAAATGACTCATGG+TGG | + | chr5.1:53101902-53101921 | MS.gene43681:intron | 45.0% |
!! | CAGTAAACTCGAGTTGGCTT+TGG | - | chr5.1:53102676-53102695 | None:intergenic | 45.0% |
!! | GGAAGAAGAAGTTGATGGTG+TGG | + | chr5.1:53102086-53102105 | MS.gene43681:intron | 45.0% |
!!! | AAATAAAATTTTGTAATTTT+TGG | - | chr5.1:53104899-53104918 | None:intergenic | 5.0% |
AAGGAGGTGGAAGGGAAATG+GGG | + | chr5.1:53102335-53102354 | MS.gene43681:intron | 50.0% | |
ACCCCAGAAGGGATTGCTAA+AGG | - | chr5.1:53104550-53104569 | None:intergenic | 50.0% | |
ACTGCAGTAGAGGGAAACCA+AGG | + | chr5.1:53102316-53102335 | MS.gene43681:intron | 50.0% | |
AGGTGACGAACCTGGATTAC+AGG | - | chr5.1:53104206-53104225 | None:intergenic | 50.0% | |
AGTGGAAAAGGTGACGAACC+TGG | - | chr5.1:53104214-53104233 | None:intergenic | 50.0% | |
ATGGTGGCAGACACTTGAAG+AGG | + | chr5.1:53100450-53100469 | MS.gene43681:intron | 50.0% | |
CAACTCGTCCTCAATGGTTG+AGG | - | chr5.1:53104153-53104172 | None:intergenic | 50.0% | |
CAAGGAGGTGGAAGGGAAAT+GGG | + | chr5.1:53102334-53102353 | MS.gene43681:intron | 50.0% | |
CTCAACCATTGAGGACGAGT+TGG | + | chr5.1:53104151-53104170 | MS.gene43681:CDS | 50.0% | |
CTTCTAGGCAAGGGATGTGA+TGG | - | chr5.1:53098921-53098940 | None:intergenic | 50.0% | |
GCAGAGAAGACTGCAGTAGA+GGG | + | chr5.1:53102307-53102326 | MS.gene43681:intron | 50.0% | |
GCCACTACAGATCCAAACAC+AGG | + | chr5.1:53104476-53104495 | MS.gene43681:intron | 50.0% | |
GCCATACCAAGGTGTGTGAA+GGG | - | chr5.1:53100190-53100209 | None:intergenic | 50.0% | |
GCTCAAAATCAGCGGCAAAC+TGG | + | chr5.1:53104113-53104132 | MS.gene43681:CDS | 50.0% | |
GCTTTCCAACTCGTCCTCAA+TGG | - | chr5.1:53104159-53104178 | None:intergenic | 50.0% | |
GGGCTAAGTGCTTGAAGTGA+AGG | + | chr5.1:53101352-53101371 | MS.gene43681:intron | 50.0% | |
GTGCCTGGAATCAAGGTCTA+CGG | + | chr5.1:53100078-53100097 | MS.gene43681:CDS | 50.0% | |
GTTGGAACTGATGTAGACGG+TGG | + | chr5.1:53101798-53101817 | MS.gene43681:intron | 50.0% | |
TACTAAAGAAGCTGCTGCGG+TGG | + | chr5.1:53099062-53099081 | MS.gene43681:CDS | 50.0% | |
TCGAGTTTACTGTGGCCATG+AGG | + | chr5.1:53102684-53102703 | MS.gene43681:CDS | 50.0% | |
TGCAGAGAAGACTGCAGTAG+AGG | + | chr5.1:53102306-53102325 | MS.gene43681:intron | 50.0% | |
TGCCATACCAAGGTGTGTGA+AGG | - | chr5.1:53100191-53100210 | None:intergenic | 50.0% | |
TGGCCACAGTAAACTCGAGT+TGG | - | chr5.1:53102682-53102701 | None:intergenic | 50.0% | |
TGTTTCCTTACCTGTGCTGG+AGG | + | chr5.1:53103280-53103299 | MS.gene43681:intron | 50.0% | |
! | GGAATTGGTGCCTGGAATCA+AGG | + | chr5.1:53100071-53100090 | MS.gene43681:CDS | 50.0% |
! | TCTGTCATGGTGGTGAACGA+CGG | + | chr5.1:53102269-53102288 | MS.gene43681:intron | 50.0% |
! | TTTTGGCCCTTCACACACCT+TGG | + | chr5.1:53100181-53100200 | MS.gene43681:CDS | 50.0% |
! | TTTTGTGGCAGGGATCATGC+TGG | + | chr5.1:53100030-53100049 | MS.gene43681:intron | 50.0% |
!! | AAAGCCTCGACTTTAGGGCA+GGG | - | chr5.1:53100262-53100281 | None:intergenic | 50.0% |
!! | CAATCCCTTCTGGGGTATAC+TGG | + | chr5.1:53104554-53104573 | MS.gene43681:intron | 50.0% |
AGGGAAACCAAGGAGGTGGA+AGG | + | chr5.1:53102326-53102345 | MS.gene43681:intron | 55.0% | |
CAGTCCATGCTTGCGGTGTT+AGG | + | chr5.1:53103103-53103122 | MS.gene43681:intron | 55.0% | |
CCAAGGAGGTGGAAGGGAAA+TGG | + | chr5.1:53102333-53102352 | MS.gene43681:intron | 55.0% | |
CCACCGTAGACCTTGATTCC+AGG | - | chr5.1:53100084-53100103 | None:intergenic | 55.0% | |
CCATTTCCCTTCCACCTCCT+TGG | - | chr5.1:53102336-53102355 | None:intergenic | 55.0% | |
CCTGGAATCAAGGTCTACGG+TGG | + | chr5.1:53100081-53100100 | MS.gene43681:CDS | 55.0% | |
CTTGGGTCAGTCCATGCTTG+CGG | + | chr5.1:53103096-53103115 | MS.gene43681:intron | 55.0% | |
GAACGACGGTACTGTTCTGG+TGG | + | chr5.1:53102283-53102302 | MS.gene43681:intron | 55.0% | |
GACAACCTCCAGCACAGGTA+AGG | - | chr5.1:53103288-53103307 | None:intergenic | 55.0% | |
GCAGTAGAGGGAAACCAAGG+AGG | + | chr5.1:53102319-53102338 | MS.gene43681:intron | 55.0% | |
GCCCTTCACACACCTTGGTA+TGG | + | chr5.1:53100186-53100205 | MS.gene43681:intron | 55.0% | |
GGGAAACCAAGGAGGTGGAA+GGG | + | chr5.1:53102327-53102346 | MS.gene43681:intron | 55.0% | |
GGGAAATGACTCATGGTGGC+CGG | + | chr5.1:53101906-53101925 | MS.gene43681:intron | 55.0% | |
GGTGAACGACGGTACTGTTC+TGG | + | chr5.1:53102280-53102299 | MS.gene43681:intron | 55.0% | |
GTAGAGGGAAACCAAGGAGG+TGG | + | chr5.1:53102322-53102341 | MS.gene43681:intron | 55.0% | |
GTGGTCCTTCAATGGCCCTT+AGG | + | chr5.1:53101399-53101418 | MS.gene43681:intron | 55.0% | |
TGGCAAAGAGGATGAGGACC+CGG | + | chr5.1:53101218-53101237 | MS.gene43681:CDS | 55.0% | |
TGGTGGCACTGTACTACCCA+AGG | + | chr5.1:53103038-53103057 | MS.gene43681:intron | 55.0% | |
! | TCGTCATCTGTCGGTTGTGC+TGG | + | chr5.1:53101719-53101738 | MS.gene43681:intron | 55.0% |
!! | CAAAGCCTCGACTTTAGGGC+AGG | - | chr5.1:53100263-53100282 | None:intergenic | 55.0% |
!!! | GAGGACCCGGCTGTTTTTAC+TGG | + | chr5.1:53101231-53101250 | MS.gene43681:CDS | 55.0% |
!!! | TTGCCGCTGATTTTGAGCCC+AGG | - | chr5.1:53104111-53104130 | None:intergenic | 55.0% |
TGTGGCAGGGATCATGCTGG+TGG | + | chr5.1:53100033-53100052 | MS.gene43681:intron | 60.0% | |
!! | CCTCGACTTTAGGGCAGGGA+GGG | - | chr5.1:53100258-53100277 | None:intergenic | 60.0% |
!! | CTCGACTTTAGGGCAGGGAG+GGG | - | chr5.1:53100257-53100276 | None:intergenic | 60.0% |
!! | TCGACTTTAGGGCAGGGAGG+GGG | - | chr5.1:53100256-53100275 | None:intergenic | 60.0% |
CCCTCCCTGCCCTAAAGTCG+AGG | + | chr5.1:53100255-53100274 | MS.gene43681:intron | 65.0% | |
GGCAGGGAGGGGGAAGGAAA+GGG | - | chr5.1:53100246-53100265 | None:intergenic | 65.0% | |
!! | CTTTAGGGCAGGGAGGGGGA+AGG | - | chr5.1:53100252-53100271 | None:intergenic | 65.0% |
!! | GCCTCGACTTTAGGGCAGGG+AGG | - | chr5.1:53100259-53100278 | None:intergenic | 65.0% |
GGGCAGGGAGGGGGAAGGAA+AGG | - | chr5.1:53100247-53100266 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 53098910 | 53105075 | 53098910 | ID=MS.gene43681 |
chr5.1 | mRNA | 53098910 | 53105075 | 53098910 | ID=MS.gene43681.t1;Parent=MS.gene43681 |
chr5.1 | exon | 53098910 | 53098956 | 53098910 | ID=MS.gene43681.t1.exon1;Parent=MS.gene43681.t1 |
chr5.1 | CDS | 53098910 | 53098956 | 53098910 | ID=cds.MS.gene43681.t1;Parent=MS.gene43681.t1 |
chr5.1 | exon | 53099047 | 53099169 | 53099047 | ID=MS.gene43681.t1.exon2;Parent=MS.gene43681.t1 |
chr5.1 | CDS | 53099047 | 53099169 | 53099047 | ID=cds.MS.gene43681.t1;Parent=MS.gene43681.t1 |
chr5.1 | exon | 53100041 | 53100202 | 53100041 | ID=MS.gene43681.t1.exon3;Parent=MS.gene43681.t1 |
chr5.1 | CDS | 53100041 | 53100202 | 53100041 | ID=cds.MS.gene43681.t1;Parent=MS.gene43681.t1 |
chr5.1 | exon | 53101185 | 53101263 | 53101185 | ID=MS.gene43681.t1.exon4;Parent=MS.gene43681.t1 |
chr5.1 | CDS | 53101185 | 53101263 | 53101185 | ID=cds.MS.gene43681.t1;Parent=MS.gene43681.t1 |
chr5.1 | exon | 53102592 | 53102705 | 53102592 | ID=MS.gene43681.t1.exon5;Parent=MS.gene43681.t1 |
chr5.1 | CDS | 53102592 | 53102705 | 53102592 | ID=cds.MS.gene43681.t1;Parent=MS.gene43681.t1 |
chr5.1 | exon | 53104038 | 53104214 | 53104038 | ID=MS.gene43681.t1.exon6;Parent=MS.gene43681.t1 |
chr5.1 | CDS | 53104038 | 53104214 | 53104038 | ID=cds.MS.gene43681.t1;Parent=MS.gene43681.t1 |
chr5.1 | exon | 53105001 | 53105075 | 53105001 | ID=MS.gene43681.t1.exon7;Parent=MS.gene43681.t1 |
chr5.1 | CDS | 53105001 | 53105075 | 53105001 | ID=cds.MS.gene43681.t1;Parent=MS.gene43681.t1 |
Gene Sequence |
Protein sequence |