Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28327.t1 | XP_003606820.1 | 97.8 | 315 | 7 | 0 | 1 | 315 | 1 | 315 | 9.30E-174 | 619.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28327.t1 | Q8LDW8 | 71.8 | 305 | 86 | 0 | 11 | 315 | 25 | 329 | 7.8e-129 | 461.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28327.t1 | G7JEV9 | 97.8 | 315 | 7 | 0 | 1 | 315 | 1 | 315 | 6.7e-174 | 619.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056395 | MS.gene28327 | 0.8305 | 2.84E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene017129 | MS.gene28327 | PPI |
| MS.gene039628 | MS.gene28327 | PPI |
| MS.gene038363 | MS.gene28327 | PPI |
| MS.gene28327 | MS.gene93729 | PPI |
| MS.gene98732 | MS.gene28327 | PPI |
| MS.gene032186 | MS.gene28327 | PPI |
| MS.gene61079 | MS.gene28327 | PPI |
| MS.gene056597 | MS.gene28327 | PPI |
| MS.gene056395 | MS.gene28327 | PPI |
| MS.gene009990 | MS.gene28327 | PPI |
| MS.gene052004 | MS.gene28327 | PPI |
| MS.gene85269 | MS.gene28327 | PPI |
| MS.gene023781 | MS.gene28327 | PPI |
| MS.gene062351 | MS.gene28327 | PPI |
| MS.gene63929 | MS.gene28327 | PPI |
| MS.gene046213 | MS.gene28327 | PPI |
| MS.gene43681 | MS.gene28327 | PPI |
| MS.gene88462 | MS.gene28327 | PPI |
| MS.gene030057 | MS.gene28327 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28327.t1 | MTR_4g068100 | 97.778 | 315 | 7 | 0 | 1 | 315 | 1 | 315 | 0.0 | 643 |
| MS.gene28327.t1 | MTR_4g068100 | 91.331 | 323 | 20 | 2 | 1 | 315 | 1 | 323 | 0.0 | 576 |
| MS.gene28327.t1 | MTR_4g068100 | 98.134 | 268 | 5 | 0 | 1 | 268 | 1 | 268 | 0.0 | 549 |
| MS.gene28327.t1 | MTR_4g068100 | 98.024 | 253 | 5 | 0 | 63 | 315 | 1 | 253 | 0.0 | 522 |
| MS.gene28327.t1 | MTR_2g099090 | 77.316 | 313 | 70 | 1 | 4 | 315 | 1 | 313 | 1.09e-178 | 496 |
| MS.gene28327.t1 | MTR_2g099090 | 77.742 | 310 | 68 | 1 | 7 | 315 | 20 | 329 | 2.70e-178 | 496 |
| MS.gene28327.t1 | MTR_5g068440 | 40.076 | 262 | 143 | 7 | 62 | 315 | 1 | 256 | 1.94e-56 | 183 |
| MS.gene28327.t1 | MTR_2g072190 | 30.460 | 174 | 104 | 7 | 73 | 232 | 58 | 228 | 3.78e-12 | 65.5 |
| MS.gene28327.t1 | MTR_2g072190 | 33.577 | 137 | 78 | 5 | 106 | 232 | 95 | 228 | 4.46e-12 | 65.9 |
| MS.gene28327.t1 | MTR_2g072190 | 30.460 | 174 | 104 | 7 | 73 | 232 | 58 | 228 | 6.03e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28327.t1 | AT1G06130 | 72.131 | 305 | 85 | 0 | 11 | 315 | 24 | 328 | 1.10e-170 | 476 |
| MS.gene28327.t1 | AT1G06130 | 72.131 | 305 | 85 | 0 | 11 | 315 | 25 | 329 | 1.37e-170 | 476 |
| MS.gene28327.t1 | AT2G31350 | 70.455 | 308 | 90 | 1 | 8 | 315 | 17 | 323 | 2.58e-166 | 465 |
| MS.gene28327.t1 | AT2G31350 | 70.588 | 306 | 89 | 1 | 10 | 315 | 20 | 324 | 4.72e-166 | 464 |
| MS.gene28327.t1 | AT2G43430 | 67.302 | 315 | 101 | 1 | 1 | 315 | 1 | 313 | 4.30e-161 | 452 |
| MS.gene28327.t1 | AT2G43430 | 68.301 | 306 | 97 | 0 | 10 | 315 | 26 | 331 | 8.09e-161 | 452 |
| MS.gene28327.t1 | AT2G43430 | 69.366 | 284 | 87 | 0 | 32 | 315 | 3 | 286 | 1.48e-150 | 424 |
| MS.gene28327.t1 | AT2G31350 | 72.000 | 225 | 62 | 1 | 10 | 234 | 20 | 243 | 1.86e-119 | 343 |
| MS.gene28327.t1 | AT3G10850 | 40.078 | 257 | 140 | 7 | 67 | 315 | 6 | 256 | 3.09e-57 | 186 |
| MS.gene28327.t1 | AT1G53580 | 31.111 | 180 | 93 | 7 | 74 | 232 | 65 | 234 | 6.29e-13 | 68.6 |
| MS.gene28327.t1 | AT1G53580 | 30.939 | 181 | 94 | 7 | 73 | 232 | 64 | 234 | 6.35e-13 | 68.6 |
Find 72 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTGTGTTATAGGTAAT+TGG | 0.186259 | 4.4:+39112455 | MS.gene28327:intron |
| AGCTTCTACTTTCCAGGATC+TGG | 0.273169 | 4.4:+39113104 | MS.gene28327:CDS |
| CATATAAGCTTCTACTTTCC+AGG | 0.289076 | 4.4:+39113098 | MS.gene28327:CDS |
| TTTAGAAAAGGTCTTCTATA+TGG | 0.306343 | 4.4:+39111811 | MS.gene28327:CDS |
| TATATGCATAATTGTCTCTT+AGG | 0.306655 | 4.4:-39112090 | None:intergenic |
| ACACTCGATGACCGATATTA+AGG | 0.314469 | 4.4:+39110824 | None:intergenic |
| CTGGAAAGTAGAAGCTTATA+TGG | 0.316865 | 4.4:-39113097 | None:intergenic |
| TGGGCAAGCCTTTATTTCTA+AGG | 0.330123 | 4.4:-39114296 | None:intergenic |
| CTCCTCGTTAATGATTGAAT+TGG | 0.352284 | 4.4:+39111927 | MS.gene28327:CDS |
| GTAGCTCACCTTAGAAATAA+AGG | 0.360851 | 4.4:+39114288 | MS.gene28327:CDS |
| CGGTCATGAGGTGCAAATAA+TGG | 0.375054 | 4.4:+39112550 | MS.gene28327:CDS |
| AGCAGATGACGCTGAAGCCC+TGG | 0.379819 | 4.4:+39114809 | MS.gene28327:CDS |
| CACCATCACGATCACACTAA+TGG | 0.384951 | 4.4:+39112229 | MS.gene28327:CDS |
| TGCCACAAGATAAGCTGAAC+AGG | 0.386376 | 4.4:-39113148 | None:intergenic |
| TAATCCAAATCAACCTGTTC+CGG | 0.404801 | 4.4:-39113188 | None:intergenic |
| GTAGACAAGGAAAGAATTCC+TGG | 0.423458 | 4.4:+39112485 | MS.gene28327:CDS |
| AAGCAAATTTGTCTCACATC+TGG | 0.436657 | 4.4:-39111790 | None:intergenic |
| TCGCCGGATTTCCGTGCTCC+AGG | 0.437127 | 4.4:-39114766 | None:intergenic |
| GTGCTCCAGGTGCGAAGGAA+TGG | 0.447198 | 4.4:-39114753 | None:intergenic |
| GCACCTGGAGCACGGAAATC+CGG | 0.447279 | 4.4:+39114763 | MS.gene28327:CDS |
| AGACAAATTTGCTTTAGAAA+AGG | 0.449326 | 4.4:+39111799 | MS.gene28327:CDS |
| GCAATCCATTCCTTCGCACC+TGG | 0.451189 | 4.4:+39114748 | MS.gene28327:CDS |
| GCTTCTACTTTCCAGGATCT+GGG | 0.453408 | 4.4:+39113105 | MS.gene28327:CDS |
| CTATGAAGGAACACCGGAAC+AGG | 0.454467 | 4.4:+39113175 | MS.gene28327:CDS |
| GGAGATAAGTGGATGTTTGC+CGG | 0.470202 | 4.4:+39112530 | MS.gene28327:CDS |
| CATTATTTGCACCTCATGAC+CGG | 0.476249 | 4.4:-39112549 | None:intergenic |
| CTGCTTGTCGAATGACACCC+AGG | 0.508543 | 4.4:-39114827 | None:intergenic |
| GGTTCCAACTACACTGAAGA+TGG | 0.510396 | 4.4:+39114716 | MS.gene28327:intron |
| CAGAGTTGAAAGAAAGGTAC+GGG | 0.522764 | 4.4:+39112257 | MS.gene28327:CDS |
| AACTACACTGAAGATGGAAA+AGG | 0.523886 | 4.4:+39114722 | MS.gene28327:CDS |
| TTGGTCAAAGCATCTATGAC+TGG | 0.527881 | 4.4:-39112169 | None:intergenic |
| TTTGTTGTATAGGGAAGAAG+TGG | 0.530959 | 4.4:+39111754 | MS.gene28327:intron |
| TCTTGTGGCAAGATCTATGA+AGG | 0.533773 | 4.4:+39113161 | MS.gene28327:CDS |
| GGCTTCAGCGTCATCTGCTG+TGG | 0.537522 | 4.4:-39114805 | None:intergenic |
| GAAAGAAAGGTACGGGGCAA+AGG | 0.538501 | 4.4:+39112264 | MS.gene28327:CDS |
| GCAGATGACGCTGAAGCCCT+GGG | 0.542024 | 4.4:+39114810 | MS.gene28327:CDS |
| GTGGAGCTAGTCGGTCATTG+AGG | 0.545029 | 4.4:+39111872 | MS.gene28327:CDS |
| ATTGATATCTATTTGAGTGA+TGG | 0.555454 | 4.4:+39112509 | MS.gene28327:CDS |
| GTGAGCTACATGTGAAGCAT+AGG | 0.556012 | 4.4:-39114274 | None:intergenic |
| CTCAAATAGATATCAATACC+AGG | 0.558430 | 4.4:-39112503 | None:intergenic |
| TGGAGCTAGTCGGTCATTGA+GGG | 0.562032 | 4.4:+39111873 | MS.gene28327:CDS |
| GCCACTCCTGGTGTCACTCA+AGG | 0.563788 | 4.4:+39112572 | MS.gene28327:CDS |
| ATGACTGGCGCAGCTTCAGA+AGG | 0.564955 | 4.4:-39112154 | None:intergenic |
| GAAACACAGAGTTGAAAGAA+AGG | 0.566759 | 4.4:+39112251 | MS.gene28327:CDS |
| ATTCCTTCGCACCTGGAGCA+CGG | 0.576893 | 4.4:+39114755 | MS.gene28327:CDS |
| TTTCCGTGCTCCAGGTGCGA+AGG | 0.583123 | 4.4:-39114758 | None:intergenic |
| ACCTTGAGTGACACCAGGAG+TGG | 0.590636 | 4.4:-39112573 | None:intergenic |
| GTGCAAATAATGGCCACTCC+TGG | 0.595517 | 4.4:+39112560 | MS.gene28327:CDS |
| ACAGAGTTGAAAGAAAGGTA+CGG | 0.599655 | 4.4:+39112256 | MS.gene28327:CDS |
| ATTTGAGTGATGGAGATAAG+TGG | 0.608883 | 4.4:+39112519 | MS.gene28327:CDS |
| GTCCATAGATCCTCAAAACA+AGG | 0.614843 | 4.4:+39114242 | MS.gene28327:CDS |
| GCATAATTGTCTCTTAGGCA+CGG | 0.619156 | 4.4:-39112085 | None:intergenic |
| CTTCTACTTTCCAGGATCTG+GGG | 0.620342 | 4.4:+39113106 | MS.gene28327:CDS |
| TTCCATTAGTGTGATCGTGA+TGG | 0.620551 | 4.4:-39112231 | None:intergenic |
| GATGATACAAGTATATATTG+TGG | 0.622515 | 4.4:+39114091 | MS.gene28327:CDS |
| CATTAGTGTGATCGTGATGG+TGG | 0.624236 | 4.4:-39112228 | None:intergenic |
| TGCTTGTCGAATGACACCCA+GGG | 0.629657 | 4.4:-39114826 | None:intergenic |
| ACCCTGTTCAGCTTATCTTG+TGG | 0.631465 | 4.4:+39113146 | MS.gene28327:CDS |
| GGGTGTCATTCGACAAGCAG+AGG | 0.637765 | 4.4:+39114830 | MS.gene28327:CDS |
| AATTGGCTCTGATGTAGACA+AGG | 0.637894 | 4.4:+39112472 | MS.gene28327:CDS |
| GTGGATGTTTGCCGGTCATG+AGG | 0.638632 | 4.4:+39112538 | MS.gene28327:CDS |
| ATTTGACCTTGAGTGACACC+AGG | 0.652212 | 4.4:-39112578 | None:intergenic |
| AAACACTGCGTGGAGCTAGT+CGG | 0.653793 | 4.4:+39111863 | MS.gene28327:CDS |
| TTGTTGTATAGGGAAGAAGT+GGG | 0.662401 | 4.4:+39111755 | MS.gene28327:intron |
| CACCAATTCAATCATTAACG+AGG | 0.676094 | 4.4:-39111929 | None:intergenic |
| GATGTGGATACAGGGACTGT+CGG | 0.677785 | 4.4:+39112121 | MS.gene28327:CDS |
| TTGTGGTCATGAATATACAT+TGG | 0.687167 | 4.4:+39114108 | MS.gene28327:CDS |
| GCCACAAGATAAGCTGAACA+GGG | 0.687499 | 4.4:-39113147 | None:intergenic |
| CAATTCAATCATTAACGAGG+AGG | 0.694595 | 4.4:-39111926 | None:intergenic |
| ATACCATTGAAAACACTGCG+TGG | 0.704763 | 4.4:+39111853 | MS.gene28327:CDS |
| CAAGATCTATGAAGGAACAC+CGG | 0.705886 | 4.4:+39113169 | MS.gene28327:CDS |
| AGAGTTGAAAGAAAGGTACG+GGG | 0.785873 | 4.4:+39112258 | MS.gene28327:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATCTATAATATCTA+AGG | + | chr4.4:39111583-39111602 | MS.gene28327:intron | 10.0% |
| !! | GAATATACAATATATTATAT+AGG | - | chr4.4:39112732-39112751 | None:intergenic | 10.0% |
| !! | TCTATAGTTATAAAATATTT+CGG | + | chr4.4:39113532-39113551 | MS.gene28327:intron | 10.0% |
| !! | TTATAATCTATAATATCTAA+GGG | + | chr4.4:39111584-39111603 | MS.gene28327:intron | 10.0% |
| !!! | ACAAAAAAATTATTATTTCT+AGG | - | chr4.4:39110912-39110931 | None:intergenic | 10.0% |
| !!! | ATAATTTGTTTTTGAATATT+AGG | + | chr4.4:39113897-39113916 | MS.gene28327:intron | 10.0% |
| !! | AAAAAAAGTTACCTTAATAT+CGG | - | chr4.4:39110838-39110857 | None:intergenic | 15.0% |
| !! | TAAAAATACAAATATTGCAT+TGG | - | chr4.4:39113735-39113754 | None:intergenic | 15.0% |
| !!! | AAAAATGATTTCTGAAATAT+TGG | - | chr4.4:39114390-39114409 | None:intergenic | 15.0% |
| !!! | ACTTACTATTTGATATTTTT+GGG | + | chr4.4:39112945-39112964 | MS.gene28327:intron | 15.0% |
| !!! | AGTTAAATTTAGATTTTTCT+TGG | - | chr4.4:39112191-39112210 | None:intergenic | 15.0% |
| !!! | ATTTTCATTTTGTTGAAAAT+TGG | + | chr4.4:39110859-39110878 | MS.gene28327:intron | 15.0% |
| !!! | CTTTTAAAATAATTCATAAC+TGG | + | chr4.4:39113436-39113455 | MS.gene28327:intron | 15.0% |
| !!! | TATTTTCATCAATTTTTTCT+AGG | + | chr4.4:39111336-39111355 | MS.gene28327:intron | 15.0% |
| !!! | TTTTCATTTTGTTGAAAATT+GGG | + | chr4.4:39110860-39110879 | MS.gene28327:intron | 15.0% |
| !! | AATATGTCATAGATTTGATT+TGG | + | chr4.4:39111168-39111187 | MS.gene28327:intron | 20.0% |
| !! | AATGTTTGAATTTGTAATTG+TGG | - | chr4.4:39111123-39111142 | None:intergenic | 20.0% |
| !! | AATTACCTATAACACAATAT+GGG | - | chr4.4:39112456-39112475 | None:intergenic | 20.0% |
| !! | AATTGCAAATTAAATAACTG+TGG | - | chr4.4:39113382-39113401 | None:intergenic | 20.0% |
| !! | AGCACAACAATATAAATTTA+AGG | - | chr4.4:39113798-39113817 | None:intergenic | 20.0% |
| !! | AGGCAACAATAATTAAATTT+AGG | + | chr4.4:39113625-39113644 | MS.gene28327:intron | 20.0% |
| !! | ATGAGATAATATAACACATT+AGG | - | chr4.4:39112045-39112064 | None:intergenic | 20.0% |
| !! | CCTTGATTATCATATAAAAA+AGG | - | chr4.4:39110962-39110981 | None:intergenic | 20.0% |
| !! | GCACAACAATATAAATTTAA+GGG | - | chr4.4:39113797-39113816 | None:intergenic | 20.0% |
| !! | GGCAACAATAATTAAATTTA+GGG | + | chr4.4:39113626-39113645 | MS.gene28327:intron | 20.0% |
| !! | TCAAACATACAAATAACTAA+TGG | - | chr4.4:39114654-39114673 | None:intergenic | 20.0% |
| !!! | AACTTAATCTTTGTTGTATA+GGG | + | chr4.4:39111745-39111764 | MS.gene28327:intron | 20.0% |
| !!! | AGTCTTTCATTTTATTTTTC+AGG | + | chr4.4:39113216-39113235 | MS.gene28327:intron | 20.0% |
| !!! | ATATTCTTTTCTCAATAACA+TGG | + | chr4.4:39112746-39112765 | MS.gene28327:intron | 20.0% |
| !!! | CCTTTTTTATATGATAATCA+AGG | + | chr4.4:39110959-39110978 | MS.gene28327:intron | 20.0% |
| !!! | CTCATTTTTCTTTAATTTTC+AGG | + | chr4.4:39112060-39112079 | MS.gene28327:intron | 20.0% |
| !!! | GACTTACTATTTGATATTTT+TGG | + | chr4.4:39112944-39112963 | MS.gene28327:intron | 20.0% |
| !!! | GTCTTTCATTTTATTTTTCA+GGG | + | chr4.4:39113217-39113236 | MS.gene28327:intron | 20.0% |
| !!! | GTGATAAAAAAAGTATATAC+AGG | - | chr4.4:39113031-39113050 | None:intergenic | 20.0% |
| !!! | TAACTTAATCTTTGTTGTAT+AGG | + | chr4.4:39111744-39111763 | MS.gene28327:intron | 20.0% |
| !!! | TGCATATATTTTATATGATG+TGG | + | chr4.4:39112105-39112124 | MS.gene28327:CDS | 20.0% |
| !!! | TTCAAAGCTATTTTACAAAA+TGG | - | chr4.4:39112835-39112854 | None:intergenic | 20.0% |
| !!! | TTCCATTTTAAGATTTTCAT+GGG | + | chr4.4:39111965-39111984 | MS.gene28327:intron | 20.0% |
| !!! | TTTTGTTCTTTACTTTTTGA+AGG | + | chr4.4:39110926-39110945 | MS.gene28327:intron | 20.0% |
| !!! | TTTTTTCTAGTCAAATGTTT+TGG | + | chr4.4:39111196-39111215 | MS.gene28327:intron | 20.0% |
| ! | ACAAATATTGCATTGGAAAA+TGG | - | chr4.4:39113728-39113747 | None:intergenic | 25.0% |
| ! | AGCAAAAGAAAATGTTACAT+CGG | - | chr4.4:39111688-39111707 | None:intergenic | 25.0% |
| ! | AGGAAAAACCCAAATTATAT+GGG | - | chr4.4:39113011-39113030 | None:intergenic | 25.0% |
| ! | ATGTTACATCGGAATTAAAA+CGG | - | chr4.4:39111677-39111696 | None:intergenic | 25.0% |
| ! | ATTACTGGAATATTGACATT+AGG | + | chr4.4:39113605-39113624 | MS.gene28327:intron | 25.0% |
| ! | ATTGATATCTATTTGAGTGA+TGG | + | chr4.4:39112509-39112528 | MS.gene28327:CDS | 25.0% |
| ! | CAATTACCTATAACACAATA+TGG | - | chr4.4:39112457-39112476 | None:intergenic | 25.0% |
| ! | CATATTGTGTTATAGGTAAT+TGG | + | chr4.4:39112455-39112474 | MS.gene28327:intron | 25.0% |
| ! | GAACATTTGAATTGAATTAC+TGG | + | chr4.4:39113590-39113609 | MS.gene28327:intron | 25.0% |
| ! | GATGATACAAGTATATATTG+TGG | + | chr4.4:39114091-39114110 | MS.gene28327:CDS | 25.0% |
| ! | TAAAAGTAGTAGGTTTGTAT+AGG | + | chr4.4:39113655-39113674 | MS.gene28327:intron | 25.0% |
| ! | TAGCCTAGATGTTAATAAAA+GGG | - | chr4.4:39111381-39111400 | None:intergenic | 25.0% |
| ! | TATATGCATAATTGTCTCTT+AGG | - | chr4.4:39112093-39112112 | None:intergenic | 25.0% |
| ! | TTAGCCTAGATGTTAATAAA+AGG | - | chr4.4:39111382-39111401 | None:intergenic | 25.0% |
| ! | TTTAGAAAAGGTCTTCTATA+TGG | + | chr4.4:39111811-39111830 | MS.gene28327:CDS | 25.0% |
| ! | TTTGACAAAGCATAAAAGAA+TGG | - | chr4.4:39113863-39113882 | None:intergenic | 25.0% |
| !! | ACATAGTTTGTGTTTGAATT+AGG | + | chr4.4:39112372-39112391 | MS.gene28327:intron | 25.0% |
| !! | ACTTCGTAAATTTTTACTGA+AGG | - | chr4.4:39114462-39114481 | None:intergenic | 25.0% |
| !! | AGGTATTTAAAATAAGTTGG+TGG | + | chr4.4:39111507-39111526 | MS.gene28327:intron | 25.0% |
| !! | ATAATCAAGGTTTTTAACCA+CGG | + | chr4.4:39110972-39110991 | MS.gene28327:intron | 25.0% |
| !! | ATTTTATATGATGTGGATAC+AGG | + | chr4.4:39112112-39112131 | MS.gene28327:CDS | 25.0% |
| !! | CTTCGTAAATTTTTACTGAA+GGG | - | chr4.4:39114461-39114480 | None:intergenic | 25.0% |
| !! | GTGAGGTATTTAAAATAAGT+TGG | + | chr4.4:39111504-39111523 | MS.gene28327:intron | 25.0% |
| !! | TAACCCTTTTATTAACATCT+AGG | + | chr4.4:39111375-39111394 | MS.gene28327:intron | 25.0% |
| !! | TTTTATATGATGTGGATACA+GGG | + | chr4.4:39112113-39112132 | MS.gene28327:CDS | 25.0% |
| !! | TTTTGTCAATACTATGAAGT+AGG | + | chr4.4:39112922-39112941 | MS.gene28327:intron | 25.0% |
| !!! | AGACAAATTTGCTTTAGAAA+AGG | + | chr4.4:39111799-39111818 | MS.gene28327:CDS | 25.0% |
| !!! | ATACATGTTAGTTTTTGATC+GGG | + | chr4.4:39114432-39114451 | MS.gene28327:intron | 25.0% |
| !!! | ATTTTAGGACTTCAATTGAA+GGG | - | chr4.4:39113330-39113349 | None:intergenic | 25.0% |
| !!! | CATACATGTTAGTTTTTGAT+CGG | + | chr4.4:39114431-39114450 | MS.gene28327:intron | 25.0% |
| !!! | CTTCCATTTTAAGATTTTCA+TGG | + | chr4.4:39111964-39111983 | MS.gene28327:intron | 25.0% |
| !!! | TACACTTTTTCATTTATACG+TGG | + | chr4.4:39111532-39111551 | MS.gene28327:intron | 25.0% |
| !!! | TCCATTTTAAGATTTTCATG+GGG | + | chr4.4:39111966-39111985 | MS.gene28327:intron | 25.0% |
| !!! | TGATTTAGCTATTTTTTCCA+TGG | + | chr4.4:39113960-39113979 | MS.gene28327:intron | 25.0% |
| !!! | TTGTTTTTGAATATTAGGTG+CGG | + | chr4.4:39113902-39113921 | MS.gene28327:intron | 25.0% |
| AAAGAAAGCAGGAAACATAA+AGG | - | chr4.4:39114152-39114171 | None:intergenic | 30.0% | |
| AAATGACAGCAATTAAGAAG+AGG | - | chr4.4:39112626-39112645 | None:intergenic | 30.0% | |
| AATAGTATATTGCGAAAGTG+AGG | - | chr4.4:39113068-39113087 | None:intergenic | 30.0% | |
| ACAAATTATTCATGTTTCCC+AGG | + | chr4.4:39114695-39114714 | MS.gene28327:intron | 30.0% | |
| ACAAGGTTTGTAACTTTGTT+GGG | + | chr4.4:39111232-39111251 | MS.gene28327:intron | 30.0% | |
| ACAGCTAAAAAATAAGAGCA+TGG | - | chr4.4:39113510-39113529 | None:intergenic | 30.0% | |
| ACATATTGACATTCTCATCA+AGG | - | chr4.4:39111155-39111174 | None:intergenic | 30.0% | |
| CAGGAAAAACCCAAATTATA+TGG | - | chr4.4:39113012-39113031 | None:intergenic | 30.0% | |
| CTATTCCCATATTGTGTTAT+AGG | + | chr4.4:39112448-39112467 | MS.gene28327:intron | 30.0% | |
| CTCAAATAGATATCAATACC+AGG | - | chr4.4:39112506-39112525 | None:intergenic | 30.0% | |
| GAATGATAATAGTAAACCCA+TGG | + | chr4.4:39111640-39111659 | MS.gene28327:intron | 30.0% | |
| TAAAATCATAGCGAAGAACA+GGG | + | chr4.4:39111411-39111430 | MS.gene28327:intron | 30.0% | |
| TACAAGGTTTGTAACTTTGT+TGG | + | chr4.4:39111231-39111250 | MS.gene28327:intron | 30.0% | |
| TACACTGTGAATGTGTATAT+GGG | - | chr4.4:39113569-39113588 | None:intergenic | 30.0% | |
| TATATAGGTAAGTGAAGTGT+AGG | - | chr4.4:39112717-39112736 | None:intergenic | 30.0% | |
| TCAAAACTTTGATGTTGTTG+TGG | + | chr4.4:39111097-39111116 | MS.gene28327:intron | 30.0% | |
| TCAACTTGATTGCTTACATT+AGG | - | chr4.4:39111477-39111496 | None:intergenic | 30.0% | |
| TCAATTGAAGTCCTAAAATC+TGG | + | chr4.4:39113331-39113350 | MS.gene28327:intron | 30.0% | |
| TTAAAATCATAGCGAAGAAC+AGG | + | chr4.4:39111410-39111429 | MS.gene28327:intron | 30.0% | |
| TTGTGGTCATGAATATACAT+TGG | + | chr4.4:39114108-39114127 | MS.gene28327:CDS | 30.0% | |
| TTTGTTAAAAGCAGAATGCA+GGG | - | chr4.4:39114680-39114699 | None:intergenic | 30.0% | |
| ! | AACATTTTCTTTTGCTGAAG+AGG | + | chr4.4:39111692-39111711 | MS.gene28327:intron | 30.0% |
| ! | AACTTCGCTTCTTTTACAAA+TGG | + | chr4.4:39114332-39114351 | MS.gene28327:intron | 30.0% |
| ! | ACAAGCAGAGGATAATTTTT+AGG | + | chr4.4:39114842-39114861 | MS.gene28327:CDS | 30.0% |
| ! | ATTAGCTTAATTCGCTTGTT+TGG | + | chr4.4:39112671-39112690 | MS.gene28327:intron | 30.0% |
| ! | ATTTGTTAAAAGCAGAATGC+AGG | - | chr4.4:39114681-39114700 | None:intergenic | 30.0% |
| ! | CAAGCAGAGGATAATTTTTA+GGG | + | chr4.4:39114843-39114862 | MS.gene28327:CDS | 30.0% |
| ! | CAGCTAAAAAATAAGAGCAT+GGG | - | chr4.4:39113509-39113528 | None:intergenic | 30.0% |
| ! | GGTGACTATTGATTATGATT+TGG | + | chr4.4:39111713-39111732 | MS.gene28327:intron | 30.0% |
| ! | TAATGTAAGCAATCAAGTTG+AGG | + | chr4.4:39111476-39111495 | MS.gene28327:intron | 30.0% |
| ! | TTGGTTGTAGATCTTTTACA+AGG | + | chr4.4:39111215-39111234 | MS.gene28327:intron | 30.0% |
| !! | GACTTTGGTTCTATGAAATT+TGG | + | chr4.4:39114196-39114215 | MS.gene28327:intron | 30.0% |
| !!! | GATTTTAGGACTTCAATTGA+AGG | - | chr4.4:39113331-39113350 | None:intergenic | 30.0% |
| !!! | TGAAGGTATTTCCAGATTTT+AGG | - | chr4.4:39113345-39113364 | None:intergenic | 30.0% |
| AAACAAGCCCTAAATGTCTT+GGG | - | chr4.4:39112788-39112807 | None:intergenic | 35.0% | |
| AAATGTCTTGGGCATAGTAT+TGG | - | chr4.4:39112777-39112796 | None:intergenic | 35.0% | |
| AACTACACTGAAGATGGAAA+AGG | + | chr4.4:39114722-39114741 | MS.gene28327:CDS | 35.0% | |
| AAGAACAGGGAGAAAAATGA+AGG | + | chr4.4:39111424-39111443 | MS.gene28327:intron | 35.0% | |
| AAGCAAATTTGTCTCACATC+TGG | - | chr4.4:39111793-39111812 | None:intergenic | 35.0% | |
| AAGTCAAAACTACAACTCCA+AGG | - | chr4.4:39114181-39114200 | None:intergenic | 35.0% | |
| ACACTGTGAATGTGTATATG+GGG | - | chr4.4:39113568-39113587 | None:intergenic | 35.0% | |
| ACAGAGTTGAAAGAAAGGTA+CGG | + | chr4.4:39112256-39112275 | MS.gene28327:CDS | 35.0% | |
| AGAAGACAACATCTGTAACA+CGG | - | chr4.4:39114047-39114066 | None:intergenic | 35.0% | |
| AGGGTTATGCTAAAAGTAGT+AGG | + | chr4.4:39113645-39113664 | MS.gene28327:intron | 35.0% | |
| ATACTATGCCCAAGACATTT+AGG | + | chr4.4:39112777-39112796 | MS.gene28327:intron | 35.0% | |
| ATTGTGTCTTAACTTTACCG+TGG | - | chr4.4:39110992-39111011 | None:intergenic | 35.0% | |
| CAATTCAATCATTAACGAGG+AGG | - | chr4.4:39111929-39111948 | None:intergenic | 35.0% | |
| CACCAATTCAATCATTAACG+AGG | - | chr4.4:39111932-39111951 | None:intergenic | 35.0% | |
| CATATAAGCTTCTACTTTCC+AGG | + | chr4.4:39113098-39113117 | MS.gene28327:CDS | 35.0% | |
| CATATACACATTCACAGTGT+AGG | + | chr4.4:39113568-39113587 | MS.gene28327:intron | 35.0% | |
| CCAGACAAAATGAAGCAAAA+CGG | - | chr4.4:39112885-39112904 | None:intergenic | 35.0% | |
| CGCAATATACTATTTACTGC+AGG | + | chr4.4:39113074-39113093 | MS.gene28327:intron | 35.0% | |
| CTAATGAAAGCAAAGTGAGA+AGG | - | chr4.4:39111293-39111312 | None:intergenic | 35.0% | |
| CTACACTGTGAATGTGTATA+TGG | - | chr4.4:39113570-39113589 | None:intergenic | 35.0% | |
| CTCCTCGTTAATGATTGAAT+TGG | + | chr4.4:39111927-39111946 | MS.gene28327:CDS | 35.0% | |
| CTGGAAAGTAGAAGCTTATA+TGG | - | chr4.4:39113100-39113119 | None:intergenic | 35.0% | |
| GAAACACAGAGTTGAAAGAA+AGG | + | chr4.4:39112251-39112270 | MS.gene28327:CDS | 35.0% | |
| GAAGTTTGCAAACTTACTGT+GGG | - | chr4.4:39114318-39114337 | None:intergenic | 35.0% | |
| GCCCCATGAAAATCTTAAAA+TGG | - | chr4.4:39111970-39111989 | None:intergenic | 35.0% | |
| GGTCATGAATATACATTGGT+TGG | + | chr4.4:39114112-39114131 | MS.gene28327:intron | 35.0% | |
| GTAGCTCACCTTAGAAATAA+AGG | + | chr4.4:39114288-39114307 | MS.gene28327:CDS | 35.0% | |
| GTGTTAGGCCCATATAATTT+GGG | + | chr4.4:39113000-39113019 | MS.gene28327:intron | 35.0% | |
| TAATCCAAATCAACCTGTTC+CGG | - | chr4.4:39113191-39113210 | None:intergenic | 35.0% | |
| TACTATGCCCAAGACATTTA+GGG | + | chr4.4:39112778-39112797 | MS.gene28327:intron | 35.0% | |
| TCAATTCAAACAGGACCTTT+CGG | - | chr4.4:39113481-39113500 | None:intergenic | 35.0% | |
| TGTGTTAGGCCCATATAATT+TGG | + | chr4.4:39112999-39113018 | MS.gene28327:intron | 35.0% | |
| TTGATTGCTTACATTAGGCT+TGG | - | chr4.4:39111472-39111491 | None:intergenic | 35.0% | |
| TTGTTGTATAGGGAAGAAGT+GGG | + | chr4.4:39111755-39111774 | MS.gene28327:intron | 35.0% | |
| ! | ATTTAGGGCTTGTTTGATTG+AGG | + | chr4.4:39112793-39112812 | MS.gene28327:intron | 35.0% |
| ! | ATTTGAGTGATGGAGATAAG+TGG | + | chr4.4:39112519-39112538 | MS.gene28327:CDS | 35.0% |
| ! | ATTTTGTCTGGCTAAACATC+TGG | + | chr4.4:39112894-39112913 | MS.gene28327:intron | 35.0% |
| ! | TATGTGGTTCTTTTAGTGCA+GGG | + | chr4.4:39114619-39114638 | MS.gene28327:intron | 35.0% |
| ! | TTTGTTGTATAGGGAAGAAG+TGG | + | chr4.4:39111754-39111773 | MS.gene28327:intron | 35.0% |
| ! | TTTTCCATCTTCAGTGTAGT+TGG | - | chr4.4:39114723-39114742 | None:intergenic | 35.0% |
| !! | TTGGTTCTATGAAATTTGGC+AGG | + | chr4.4:39114200-39114219 | MS.gene28327:intron | 35.0% |
| !!! | GATTGAAGTTCCTTGTTTTG+AGG | - | chr4.4:39114255-39114274 | None:intergenic | 35.0% |
| !!! | TGGAGTTGTAGTTTTGACTT+TGG | + | chr4.4:39114181-39114200 | MS.gene28327:intron | 35.0% |
| !!! | TTATTTTTCAGGGTGACAAC+TGG | + | chr4.4:39113227-39113246 | MS.gene28327:intron | 35.0% |
| !!! | TTCCTTGTTTTGAGGATCTA+TGG | - | chr4.4:39114247-39114266 | None:intergenic | 35.0% |
| AAGAACCACATAGTTGCTAC+AGG | - | chr4.4:39114611-39114630 | None:intergenic | 40.0% | |
| AATTCGCTTGTTTGGCACAT+TGG | + | chr4.4:39112679-39112698 | MS.gene28327:intron | 40.0% | |
| ATAATAGTAAACCCATGGCG+TGG | + | chr4.4:39111645-39111664 | MS.gene28327:intron | 40.0% | |
| ATACCATTGAAAACACTGCG+TGG | + | chr4.4:39111853-39111872 | MS.gene28327:CDS | 40.0% | |
| ATGAAAGCAAAGTGAGAAGG+TGG | - | chr4.4:39111290-39111309 | None:intergenic | 40.0% | |
| CAAACAAGCCCTAAATGTCT+TGG | - | chr4.4:39112789-39112808 | None:intergenic | 40.0% | |
| CAAGATCTATGAAGGAACAC+CGG | + | chr4.4:39113169-39113188 | MS.gene28327:CDS | 40.0% | |
| CAAGGCTTAGAAAAGAAAGC+AGG | - | chr4.4:39114163-39114182 | None:intergenic | 40.0% | |
| CACAAGTGTGAACTAGCAAA+AGG | - | chr4.4:39112983-39113002 | None:intergenic | 40.0% | |
| CATTATTTGCACCTCATGAC+CGG | - | chr4.4:39112552-39112571 | None:intergenic | 40.0% | |
| CGAAGTTTGCAAACTTACTG+TGG | - | chr4.4:39114319-39114338 | None:intergenic | 40.0% | |
| GAAAGGTCCTGTTTGAATTG+AGG | + | chr4.4:39113480-39113499 | MS.gene28327:intron | 40.0% | |
| GCATAATTGTCTCTTAGGCA+CGG | - | chr4.4:39112088-39112107 | None:intergenic | 40.0% | |
| GTAGACAAGGAAAGAATTCC+TGG | + | chr4.4:39112485-39112504 | MS.gene28327:CDS | 40.0% | |
| GTCACTCAAGGTCAAATTCA+TGG | + | chr4.4:39112584-39112603 | MS.gene28327:intron | 40.0% | |
| GTCCATAGATCCTCAAAACA+AGG | + | chr4.4:39114242-39114261 | MS.gene28327:CDS | 40.0% | |
| TATATTGCGAAAGTGAGGAC+TGG | - | chr4.4:39113063-39113082 | None:intergenic | 40.0% | |
| TCTTGTGGCAAGATCTATGA+AGG | + | chr4.4:39113161-39113180 | MS.gene28327:CDS | 40.0% | |
| TGCTAGTTCACACTTGTGTT+AGG | + | chr4.4:39112985-39113004 | MS.gene28327:intron | 40.0% | |
| TGGGTAACCTCAATTCAAAC+AGG | - | chr4.4:39113490-39113509 | None:intergenic | 40.0% | |
| TTCAGTCACTAAAGCTAACG+AGG | + | chr4.4:39112004-39112023 | MS.gene28327:intron | 40.0% | |
| TTCCATTAGTGTGATCGTGA+TGG | - | chr4.4:39112234-39112253 | None:intergenic | 40.0% | |
| ! | AAGTATCTGACTTGACACCA+TGG | - | chr4.4:39113980-39113999 | None:intergenic | 40.0% |
| ! | AGAGTTGAAAGAAAGGTACG+GGG | + | chr4.4:39112258-39112277 | MS.gene28327:CDS | 40.0% |
| ! | CAGAGTTGAAAGAAAGGTAC+GGG | + | chr4.4:39112257-39112276 | MS.gene28327:CDS | 40.0% |
| ! | CCGTTTTGCTTCATTTTGTC+TGG | + | chr4.4:39112882-39112901 | MS.gene28327:intron | 40.0% |
| ! | CTATGTGGTTCTTTTAGTGC+AGG | + | chr4.4:39114618-39114637 | MS.gene28327:intron | 40.0% |
| ! | CTGCTTTCTTTTCTAAGCCT+TGG | + | chr4.4:39114161-39114180 | MS.gene28327:intron | 40.0% |
| ! | TGGATCAAGTGCTTTTGTGA+AGG | - | chr4.4:39113362-39113381 | None:intergenic | 40.0% |
| ! | TTGGTCAAAGCATCTATGAC+TGG | - | chr4.4:39112172-39112191 | None:intergenic | 40.0% |
| !! | AAATGCTAAAGAGTGCCCTT+AGG | - | chr4.4:39113774-39113793 | None:intergenic | 40.0% |
| !! | AAGCAATCAAGTTGAGGAGT+TGG | + | chr4.4:39111482-39111501 | MS.gene28327:intron | 40.0% |
| !! | AATGCTAAAGAGTGCCCTTA+GGG | - | chr4.4:39113773-39113792 | None:intergenic | 40.0% |
| !! | AATTGGCTCTGATGTAGACA+AGG | + | chr4.4:39112472-39112491 | MS.gene28327:CDS | 40.0% |
| !! | TGGGCAAGCCTTTATTTCTA+AGG | - | chr4.4:39114299-39114318 | None:intergenic | 40.0% |
| !!! | CTGCAACTTTTAGTTTTCGC+CGG | - | chr4.4:39114785-39114804 | None:intergenic | 40.0% |
| ACCCTGTTCAGCTTATCTTG+TGG | + | chr4.4:39113146-39113165 | MS.gene28327:CDS | 45.0% | |
| AGCTTCTACTTTCCAGGATC+TGG | + | chr4.4:39113104-39113123 | MS.gene28327:CDS | 45.0% | |
| AGTTGCCTGTAGCAACTATG+TGG | + | chr4.4:39114603-39114622 | MS.gene28327:intron | 45.0% | |
| ATTTGACCTTGAGTGACACC+AGG | - | chr4.4:39112581-39112600 | None:intergenic | 45.0% | |
| CACCATCACGATCACACTAA+TGG | + | chr4.4:39112229-39112248 | MS.gene28327:CDS | 45.0% | |
| CAGGCAACTAGGCAAGAAAT+CGG | - | chr4.4:39114592-39114611 | None:intergenic | 45.0% | |
| CATAGTTGCTACAGGCAACT+AGG | - | chr4.4:39114603-39114622 | None:intergenic | 45.0% | |
| CATTAGTGTGATCGTGATGG+TGG | - | chr4.4:39112231-39112250 | None:intergenic | 45.0% | |
| CCTCTTAACCAATGCCCTAA+GGG | + | chr4.4:39113756-39113775 | MS.gene28327:intron | 45.0% | |
| CGGTCATGAGGTGCAAATAA+TGG | + | chr4.4:39112550-39112569 | MS.gene28327:CDS | 45.0% | |
| CTTCAGTGTAGTTGGAACCT+GGG | - | chr4.4:39114715-39114734 | None:intergenic | 45.0% | |
| CTTCTACTTTCCAGGATCTG+GGG | + | chr4.4:39113106-39113125 | MS.gene28327:CDS | 45.0% | |
| CTTTGTTGGGAGCAATGAAG+TGG | + | chr4.4:39111245-39111264 | MS.gene28327:intron | 45.0% | |
| GCCACAAGATAAGCTGAACA+GGG | - | chr4.4:39113150-39113169 | None:intergenic | 45.0% | |
| GCTTCTACTTTCCAGGATCT+GGG | + | chr4.4:39113105-39113124 | MS.gene28327:CDS | 45.0% | |
| GGAGATAAGTGGATGTTTGC+CGG | + | chr4.4:39112530-39112549 | MS.gene28327:CDS | 45.0% | |
| GGTTCCAACTACACTGAAGA+TGG | + | chr4.4:39114716-39114735 | MS.gene28327:intron | 45.0% | |
| GTGAGCTACATGTGAAGCAT+AGG | - | chr4.4:39114277-39114296 | None:intergenic | 45.0% | |
| TCCTCTTAACCAATGCCCTA+AGG | + | chr4.4:39113755-39113774 | MS.gene28327:intron | 45.0% | |
| TCTTCAGTGTAGTTGGAACC+TGG | - | chr4.4:39114716-39114735 | None:intergenic | 45.0% | |
| TGCCACAAGATAAGCTGAAC+AGG | - | chr4.4:39113151-39113170 | None:intergenic | 45.0% | |
| ! | CAACGAGCAGGTTTAAAGTG+AGG | + | chr4.4:39112404-39112423 | MS.gene28327:intron | 45.0% |
| ! | TCTGAAGTTCCTGTTCCGAA+AGG | + | chr4.4:39113463-39113482 | MS.gene28327:intron | 45.0% |
| !! | AACACCGGAACAGGTTGATT+TGG | + | chr4.4:39113184-39113203 | MS.gene28327:intron | 45.0% |
| !! | ATCAAGTTGAGGAGTTGGTG+AGG | + | chr4.4:39111487-39111506 | MS.gene28327:intron | 45.0% |
| !! | TCTTGGGCATAGTATTGGCA+GGG | - | chr4.4:39112772-39112791 | None:intergenic | 45.0% |
| AAACACTGCGTGGAGCTAGT+CGG | + | chr4.4:39111863-39111882 | MS.gene28327:CDS | 50.0% | |
| AAACGGAGAAAACCACGCCA+TGG | - | chr4.4:39111660-39111679 | None:intergenic | 50.0% | |
| AACGGAGAAAACCACGCCAT+GGG | - | chr4.4:39111659-39111678 | None:intergenic | 50.0% | |
| AGGTTTCACTTGCAACGAGC+AGG | + | chr4.4:39112392-39112411 | MS.gene28327:intron | 50.0% | |
| CAAACAGGACCTTTCGGAAC+AGG | - | chr4.4:39113475-39113494 | None:intergenic | 50.0% | |
| CTATGAAGGAACACCGGAAC+AGG | + | chr4.4:39113175-39113194 | MS.gene28327:CDS | 50.0% | |
| GAAGTCACTGCAGTCACTGT+TGG | + | chr4.4:39114477-39114496 | MS.gene28327:intron | 50.0% | |
| GATGTGGATACAGGGACTGT+CGG | + | chr4.4:39112121-39112140 | MS.gene28327:CDS | 50.0% | |
| GTGCAAATAATGGCCACTCC+TGG | + | chr4.4:39112560-39112579 | MS.gene28327:CDS | 50.0% | |
| TGGAGCTAGTCGGTCATTGA+GGG | + | chr4.4:39111873-39111892 | MS.gene28327:CDS | 50.0% | |
| ! | AAGTGAGGACTGGCAGATTC+AGG | - | chr4.4:39113053-39113072 | None:intergenic | 50.0% |
| ! | GAAAGAAAGGTACGGGGCAA+AGG | + | chr4.4:39112264-39112283 | MS.gene28327:CDS | 50.0% |
| ! | GCTCCACGCAGTGTTTTCAA+TGG | - | chr4.4:39111859-39111878 | None:intergenic | 50.0% |
| !! | AAAGAGTGCCCTTAGGGCAT+TGG | - | chr4.4:39113767-39113786 | None:intergenic | 50.0% |
| !! | CCCTTAGGGCATTGGTTAAG+AGG | - | chr4.4:39113759-39113778 | None:intergenic | 50.0% |
| !! | GGATCTGGGGCACTTTTTAC+AGG | + | chr4.4:39113119-39113138 | MS.gene28327:CDS | 50.0% |
| !! | GTAAAAAGTGCCCCAGATCC+TGG | - | chr4.4:39113119-39113138 | None:intergenic | 50.0% |
| !! | GTCTTGGGCATAGTATTGGC+AGG | - | chr4.4:39112773-39112792 | None:intergenic | 50.0% |
| ACCTTGAGTGACACCAGGAG+TGG | - | chr4.4:39112576-39112595 | None:intergenic | 55.0% | |
| ATGACTGGCGCAGCTTCAGA+AGG | - | chr4.4:39112157-39112176 | None:intergenic | 55.0% | |
| ATTCCTTCGCACCTGGAGCA+CGG | + | chr4.4:39114755-39114774 | MS.gene28327:CDS | 55.0% | |
| GCAATCCATTCCTTCGCACC+TGG | + | chr4.4:39114748-39114767 | MS.gene28327:CDS | 55.0% | |
| GTGGAGCTAGTCGGTCATTG+AGG | + | chr4.4:39111872-39111891 | MS.gene28327:CDS | 55.0% | |
| GTGGATGTTTGCCGGTCATG+AGG | + | chr4.4:39112538-39112557 | MS.gene28327:CDS | 55.0% | |
| !! | GGGTGTCATTCGACAAGCAG+AGG | + | chr4.4:39114830-39114849 | MS.gene28327:CDS | 55.0% |
| GCACCTGGAGCACGGAAATC+CGG | + | chr4.4:39114763-39114782 | MS.gene28327:CDS | 60.0% | |
| GGCTTCAGCGTCATCTGCTG+TGG | - | chr4.4:39114808-39114827 | None:intergenic | 60.0% | |
| GTGCTCCAGGTGCGAAGGAA+TGG | - | chr4.4:39114756-39114775 | None:intergenic | 60.0% | |
| TTTCCGTGCTCCAGGTGCGA+AGG | - | chr4.4:39114761-39114780 | None:intergenic | 60.0% | |
| !! | GCCACTCCTGGTGTCACTCA+AGG | + | chr4.4:39112572-39112591 | MS.gene28327:CDS | 60.0% |
| TCGCCGGATTTCCGTGCTCC+AGG | - | chr4.4:39114769-39114788 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 39110831 | 39114863 | 39110831 | ID=MS.gene28327 |
| chr4.4 | mRNA | 39110831 | 39114863 | 39110831 | ID=MS.gene28327.t1;Parent=MS.gene28327 |
| chr4.4 | exon | 39110831 | 39110845 | 39110831 | ID=MS.gene28327.t1.exon1;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39110831 | 39110845 | 39110831 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| chr4.4 | exon | 39111766 | 39111948 | 39111766 | ID=MS.gene28327.t1.exon2;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39111766 | 39111948 | 39111766 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| chr4.4 | exon | 39112082 | 39112285 | 39112082 | ID=MS.gene28327.t1.exon3;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39112082 | 39112285 | 39112082 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| chr4.4 | exon | 39112470 | 39112593 | 39112470 | ID=MS.gene28327.t1.exon4;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39112470 | 39112593 | 39112470 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| chr4.4 | exon | 39113096 | 39113196 | 39113096 | ID=MS.gene28327.t1.exon5;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39113096 | 39113196 | 39113096 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| chr4.4 | exon | 39114055 | 39114129 | 39114055 | ID=MS.gene28327.t1.exon6;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39114055 | 39114129 | 39114055 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| chr4.4 | exon | 39114222 | 39114320 | 39114222 | ID=MS.gene28327.t1.exon7;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39114222 | 39114320 | 39114222 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| chr4.4 | exon | 39114717 | 39114863 | 39114717 | ID=MS.gene28327.t1.exon8;Parent=MS.gene28327.t1 |
| chr4.4 | CDS | 39114717 | 39114863 | 39114717 | ID=cds.MS.gene28327.t1;Parent=MS.gene28327.t1 |
| Gene Sequence |
| Protein sequence |
