Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43898.t1 | XP_003613292.1 | 89.2 | 268 | 29 | 0 | 1 | 268 | 83 | 350 | 3.00E-117 | 431.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43898.t1 | Q94JU2 | 47.1 | 244 | 124 | 2 | 9 | 251 | 95 | 334 | 7.5e-56 | 218.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43898.t1 | G7K2S5 | 89.2 | 268 | 29 | 0 | 1 | 268 | 83 | 350 | 2.2e-117 | 431.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051064 | MS.gene43898 | 0.83263 | 8.47E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene43898 | 0.806325 | 8.69E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAATCAGATTGGATAAT+TGG | 0.197562 | 5.2:-25507934 | MS.gene43898:CDS |
| TCCAATCTGATTTCCCTAAA+AGG | 0.218236 | 5.2:+25507941 | None:intergenic |
| AGTGCAATGACCACTCTTAA+AGG | 0.236929 | 5.2:+25507013 | None:intergenic |
| GGAGCTGCTATCATAGTTAT+TGG | 0.246971 | 5.2:-25506824 | MS.gene43898:CDS |
| GTGTTTATCACTAGCTCTTC+TGG | 0.247926 | 5.2:+25507468 | None:intergenic |
| ACTCATATGTTAATGACTTC+TGG | 0.288657 | 5.2:-25511318 | MS.gene43898:CDS |
| GGCACAGTGGTCTCTATTGC+AGG | 0.308068 | 5.2:-25508048 | MS.gene43898:CDS |
| AGCAGCCAGGCAAAAGTTAT+TGG | 0.314638 | 5.2:-25508069 | MS.gene43898:CDS |
| TTCTCTTCTGTTTATTGTCC+AGG | 0.332403 | 5.2:-25507878 | MS.gene43898:intron |
| TTGAACATAGCTACATATAT+TGG | 0.334507 | 5.2:+25507037 | None:intergenic |
| ACTTATTGGTGCAGCTTGAT+TGG | 0.350269 | 5.2:-25506845 | MS.gene43898:intron |
| AAACAAAAGCATGGATATAT+AGG | 0.382758 | 5.2:-25506711 | None:intergenic |
| TCATACTTGCTATAATTTCA+AGG | 0.384041 | 5.2:-25511233 | MS.gene43898:intron |
| TTGGGAGACAATCTTTATCT+TGG | 0.387204 | 5.2:-25506971 | MS.gene43898:CDS |
| ACAGATAGCAACTGTTTATC+AGG | 0.412768 | 5.2:+25507363 | None:intergenic |
| ATATACAGACTTGGATTGTC+AGG | 0.424821 | 5.2:-25507497 | MS.gene43898:intron |
| CAGAGGGAAATTCAAATGCT+TGG | 0.454003 | 5.2:-25507395 | MS.gene43898:CDS |
| TTATTGGCATCATTAATCAA+TGG | 0.483388 | 5.2:+25507994 | None:intergenic |
| TACCACAAAACAGCAACAAA+TGG | 0.500109 | 5.2:+25507446 | None:intergenic |
| GCAAGTATGAAGGTGAAAGC+AGG | 0.505783 | 5.2:+25511246 | None:intergenic |
| AGTGGTCATTGCACTTAGCA+TGG | 0.527230 | 5.2:-25507005 | MS.gene43898:CDS |
| TGAAATTATAGCAAGTATGA+AGG | 0.531313 | 5.2:+25511236 | None:intergenic |
| AATATAGAAATGGGAGCAAG+TGG | 0.531385 | 5.2:-25507970 | MS.gene43898:CDS |
| GAGACAATCTTTATCTTGGA+AGG | 0.532255 | 5.2:-25506967 | MS.gene43898:intron |
| GTGGTCATTGCACTTAGCAT+GGG | 0.547313 | 5.2:-25507004 | MS.gene43898:CDS |
| CTCTGCAATGAGAGCTACAA+TGG | 0.554415 | 5.2:+25507413 | None:intergenic |
| GCACAGTGGTCTCTATTGCA+GGG | 0.571242 | 5.2:-25508047 | MS.gene43898:CDS |
| ACATGGGCATGTCATAAGAA+AGG | 0.572940 | 5.2:-25507061 | MS.gene43898:CDS |
| CACAGTGGTCTCTATTGCAG+GGG | 0.584216 | 5.2:-25508046 | MS.gene43898:CDS |
| TATACAGACTTGGATTGTCA+GGG | 0.590593 | 5.2:-25507496 | MS.gene43898:intron |
| TGGTCATTGCACTTAGCATG+GGG | 0.592040 | 5.2:-25507003 | MS.gene43898:CDS |
| TATGTTCAAACCTTTAAGAG+TGG | 0.597273 | 5.2:-25507023 | MS.gene43898:CDS |
| TCTGTTGTCAAACAAAAGCA+TGG | 0.602843 | 5.2:-25506720 | MS.gene43898:CDS |
| ATTGTAGCTCTCATTGCAGA+GGG | 0.608307 | 5.2:-25507411 | MS.gene43898:CDS |
| GATATGGGCACAAGCTCAAG+AGG | 0.617122 | 5.2:-25506789 | MS.gene43898:CDS |
| TAAATTCAGTTCTCCCACGT+TGG | 0.619926 | 5.2:-25511292 | MS.gene43898:CDS |
| CAAGTATGAAGGTGAAAGCA+GGG | 0.622957 | 5.2:+25511247 | None:intergenic |
| TGAAGAATGTTATACACACA+TGG | 0.625464 | 5.2:-25507078 | MS.gene43898:CDS |
| CATTGTAGCTCTCATTGCAG+AGG | 0.632723 | 5.2:-25507412 | MS.gene43898:CDS |
| AACAATAGCTGAAGCCAACG+TGG | 0.634527 | 5.2:+25511278 | None:intergenic |
| GAAGAATGTTATACACACAT+GGG | 0.649829 | 5.2:-25507077 | MS.gene43898:CDS |
| GGTCATTGCACTTAGCATGG+GGG | 0.701257 | 5.2:-25507002 | MS.gene43898:CDS |
| ACAATAGCTGAAGCCAACGT+GGG | 0.701649 | 5.2:+25511279 | None:intergenic |
| GGCAAAAGTTATTGGCACAG+TGG | 0.705210 | 5.2:-25508061 | MS.gene43898:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTAATTAAAAAA+TGG | - | chr5.2:25511165-25511184 | MS.gene43898:intron | 0.0% |
| !! | AATAAAAAATTAACATAATG+AGG | + | chr5.2:25509434-25509453 | None:intergenic | 10.0% |
| !!! | TATTTTTTTAAATAATAGAG+TGG | - | chr5.2:25507464-25507483 | MS.gene43898:CDS | 10.0% |
| !! | AACTTCAAAAATATCAATAA+TGG | + | chr5.2:25508171-25508190 | None:intergenic | 15.0% |
| !! | AATATCATCTATAATTGAAT+CGG | + | chr5.2:25509139-25509158 | None:intergenic | 15.0% |
| !! | ATAATATGATCTATTTATAG+TGG | + | chr5.2:25507447-25507466 | None:intergenic | 15.0% |
| !! | ATATGTAATTGTAGTATTAA+AGG | + | chr5.2:25509757-25509776 | None:intergenic | 15.0% |
| !! | ATCATATGTTTCATATAATA+GGG | - | chr5.2:25507392-25507411 | MS.gene43898:CDS | 15.0% |
| !! | ATTCCAATTAATCAAATTTA+AGG | - | chr5.2:25507091-25507110 | MS.gene43898:CDS | 15.0% |
| !! | TAAGGCATATTTAATTAAAT+AGG | - | chr5.2:25508069-25508088 | MS.gene43898:CDS | 15.0% |
| !! | TAATATGATCTATTTATAGT+GGG | + | chr5.2:25507446-25507465 | None:intergenic | 15.0% |
| !! | TTATATATGAAAAGCTTAAT+AGG | + | chr5.2:25508140-25508159 | None:intergenic | 15.0% |
| !!! | AAAAGTTATTGTAGTTTTTA+AGG | - | chr5.2:25507117-25507136 | MS.gene43898:intron | 15.0% |
| !!! | ATTATTTTTCACAAATTTGT+TGG | + | chr5.2:25511108-25511127 | None:intergenic | 15.0% |
| !!! | CATAAAATAGGTTTTTAAAT+AGG | - | chr5.2:25508526-25508545 | MS.gene43898:intron | 15.0% |
| !!! | TAAAAAATGGTTTAACTTAT+TGG | - | chr5.2:25511178-25511197 | MS.gene43898:intron | 15.0% |
| !!! | TGAATTATTATTATTTTGGT+GGG | - | chr5.2:25507068-25507087 | MS.gene43898:CDS | 15.0% |
| !!! | TGACTGAATTATTATTATTT+TGG | - | chr5.2:25507064-25507083 | MS.gene43898:CDS | 15.0% |
| !!! | TTGTTTCTTGATAATTTTAT+TGG | - | chr5.2:25507247-25507266 | MS.gene43898:intron | 15.0% |
| !! | AATAAACTTATATAAGTCTG+AGG | - | chr5.2:25508844-25508863 | MS.gene43898:intron | 20.0% |
| !! | ACAAAGAACTAAAAATTGTA+AGG | - | chr5.2:25509515-25509534 | MS.gene43898:intron | 20.0% |
| !! | ACATCAAAAACCTTTATATT+CGG | + | chr5.2:25510361-25510380 | None:intergenic | 20.0% |
| !! | ATAATTTCAAGGTATGTTTA+TGG | - | chr5.2:25506815-25506834 | MS.gene43898:CDS | 20.0% |
| !! | ATCCTTGATAAAAGAAAAAA+CGG | + | chr5.2:25508996-25509015 | None:intergenic | 20.0% |
| !! | GATCATATGTTTCATATAAT+AGG | - | chr5.2:25507391-25507410 | MS.gene43898:CDS | 20.0% |
| !! | GCCAATAAAAATATAGAAAT+GGG | - | chr5.2:25510058-25510077 | MS.gene43898:intron | 20.0% |
| !! | TAAATAATGAATTCTTACGA+AGG | + | chr5.2:25508261-25508280 | None:intergenic | 20.0% |
| !! | TAAATACTCAGTATATATGA+AGG | + | chr5.2:25509109-25509128 | None:intergenic | 20.0% |
| !! | TCTCCTTAAATTTGATTAAT+TGG | + | chr5.2:25507097-25507116 | None:intergenic | 20.0% |
| !! | TGCCAATAAAAATATAGAAA+TGG | - | chr5.2:25510057-25510076 | MS.gene43898:intron | 20.0% |
| !! | TTAAAAACAAGGGTTTAAAA+AGG | - | chr5.2:25509620-25509639 | MS.gene43898:intron | 20.0% |
| !! | TTTATAATATCTGACATGAT+AGG | - | chr5.2:25507348-25507367 | MS.gene43898:intron | 20.0% |
| !!! | AACCTTGTTTTTTAAAAACA+AGG | - | chr5.2:25509609-25509628 | MS.gene43898:intron | 20.0% |
| !!! | AATTGTAGCTGTTTAAATTT+TGG | - | chr5.2:25510871-25510890 | MS.gene43898:intron | 20.0% |
| !!! | ACAAGGTTTAATAACATTTT+TGG | + | chr5.2:25509597-25509616 | None:intergenic | 20.0% |
| !!! | ACCTTGTTTTTTAAAAACAA+GGG | - | chr5.2:25509610-25509629 | MS.gene43898:intron | 20.0% |
| !!! | ATTTGGCTATTTTTTTGTTT+TGG | + | chr5.2:25509370-25509389 | None:intergenic | 20.0% |
| !!! | CATAAAATAGGCTTTTAAAT+AGG | - | chr5.2:25508364-25508383 | MS.gene43898:intron | 20.0% |
| !!! | CATACATCTCTTTTTTAATT+CGG | - | chr5.2:25507278-25507297 | MS.gene43898:intron | 20.0% |
| !!! | CTGAATTATTATTATTTTGG+TGG | - | chr5.2:25507067-25507086 | MS.gene43898:CDS | 20.0% |
| !!! | TAAAAACCTATTTTATGCTA+AGG | + | chr5.2:25508523-25508542 | None:intergenic | 20.0% |
| !!! | TAATATATAGTTTGTTTACC+TGG | + | chr5.2:25510180-25510199 | None:intergenic | 20.0% |
| !!! | TAGTAATGAAATTTTGAAAG+TGG | + | chr5.2:25509849-25509868 | None:intergenic | 20.0% |
| !!! | TAGTTGTGACATTTTATAAA+GGG | - | chr5.2:25510017-25510036 | MS.gene43898:intron | 20.0% |
| !!! | TATTTTTTCTTGTATTTGCA+AGG | + | chr5.2:25509887-25509906 | None:intergenic | 20.0% |
| !!! | TCCCATTTCTATATTTTTAT+TGG | + | chr5.2:25510062-25510081 | None:intergenic | 20.0% |
| !!! | TTAGTCTTAGTTTAGTTATT+TGG | + | chr5.2:25509387-25509406 | None:intergenic | 20.0% |
| !!! | TTAGTTGTGACATTTTATAA+AGG | - | chr5.2:25510016-25510035 | MS.gene43898:intron | 20.0% |
| !!! | TTGATAATTTTATTGGTTGT+GGG | - | chr5.2:25507254-25507273 | MS.gene43898:intron | 20.0% |
| ! | AAAAAAAAACTAGCCAATCT+TGG | + | chr5.2:25511147-25511166 | None:intergenic | 25.0% |
| ! | AAATAGGCCAAAACTTATTA+AGG | + | chr5.2:25508311-25508330 | None:intergenic | 25.0% |
| ! | AATGATGATTAATCCAAGAT+TGG | - | chr5.2:25511131-25511150 | MS.gene43898:intron | 25.0% |
| ! | ACATGCTTTATCATATCAAT+AGG | - | chr5.2:25510487-25510506 | MS.gene43898:intron | 25.0% |
| ! | ACCACCAATATGAATAAATA+TGG | + | chr5.2:25507879-25507898 | None:intergenic | 25.0% |
| ! | ACTATATCTCTTTCATAGAT+AGG | - | chr5.2:25507164-25507183 | MS.gene43898:intron | 25.0% |
| ! | ATATAAACCTACTCCTAAAT+AGG | + | chr5.2:25508327-25508346 | None:intergenic | 25.0% |
| ! | ATCCCCATATTTATTCATAT+TGG | - | chr5.2:25507872-25507891 | MS.gene43898:intron | 25.0% |
| ! | ATGAATAAATATGGGGATAA+CGG | + | chr5.2:25507870-25507889 | None:intergenic | 25.0% |
| ! | ATGCTTTATCATATCAATAG+GGG | - | chr5.2:25510489-25510508 | MS.gene43898:intron | 25.0% |
| ! | CACCAATATGAATAAATATG+GGG | + | chr5.2:25507877-25507896 | None:intergenic | 25.0% |
| ! | CATATTTAATTAAATAGGCC+AGG | - | chr5.2:25508074-25508093 | MS.gene43898:CDS | 25.0% |
| ! | CATGCTTTATCATATCAATA+GGG | - | chr5.2:25510488-25510507 | MS.gene43898:intron | 25.0% |
| ! | CCACCAATATGAATAAATAT+GGG | + | chr5.2:25507878-25507897 | None:intergenic | 25.0% |
| ! | CTAAATAACCAATCATATGA+AGG | + | chr5.2:25508213-25508232 | None:intergenic | 25.0% |
| ! | TGAAATTATAGCAAGTATGA+AGG | + | chr5.2:25506804-25506823 | None:intergenic | 25.0% |
| ! | TGTGGATATTCATTTAATCA+TGG | - | chr5.2:25510897-25510916 | MS.gene43898:intron | 25.0% |
| ! | TGTTTATGGTTGAAATTACA+AGG | - | chr5.2:25506829-25506848 | MS.gene43898:CDS | 25.0% |
| ! | TTATTGGCATCATTAATCAA+TGG | + | chr5.2:25510046-25510065 | None:intergenic | 25.0% |
| ! | TTGAACATAGCTACATATAT+TGG | + | chr5.2:25511003-25511022 | None:intergenic | 25.0% |
| ! | TTTCAAGATTGATATTAGCA+AGG | - | chr5.2:25507671-25507690 | MS.gene43898:intron | 25.0% |
| !! | CACTATTCTTAAAACTTTTG+AGG | - | chr5.2:25508805-25508824 | MS.gene43898:intron | 25.0% |
| !! | CATATGATTGGTTATTTAGT+AGG | - | chr5.2:25508214-25508233 | MS.gene43898:intron | 25.0% |
| !! | GATAAAGCTTGAATACTTTT+GGG | - | chr5.2:25509730-25509749 | MS.gene43898:intron | 25.0% |
| !! | TAAAAGCCTATTTTATGCTA+AGG | + | chr5.2:25508361-25508380 | None:intergenic | 25.0% |
| !! | TGATAAAGCTTGAATACTTT+TGG | - | chr5.2:25509729-25509748 | MS.gene43898:intron | 25.0% |
| !!! | ACCCTTGTTTTTAAAAAACA+AGG | + | chr5.2:25509614-25509633 | None:intergenic | 25.0% |
| !!! | AGTTCAATTTAGTTCTGATT+TGG | + | chr5.2:25509334-25509353 | None:intergenic | 25.0% |
| !!! | CTGTTTAAATTTTGGTTTTG+TGG | - | chr5.2:25510879-25510898 | MS.gene43898:intron | 25.0% |
| !!! | CTTGATAATTTTATTGGTTG+TGG | - | chr5.2:25507253-25507272 | MS.gene43898:intron | 25.0% |
| !!! | GATATTTTTGAAAATCACCT+TGG | + | chr5.2:25509704-25509723 | None:intergenic | 25.0% |
| !!! | TAATAAGTTTTGGCCTATTT+AGG | - | chr5.2:25508311-25508330 | MS.gene43898:intron | 25.0% |
| !!! | TCATACTTGCTATAATTTCA+AGG | - | chr5.2:25506804-25506823 | MS.gene43898:CDS | 25.0% |
| !!! | TTACAAGGTTTGTTGTTTTT+TGG | - | chr5.2:25506844-25506863 | MS.gene43898:intron | 25.0% |
| AAGACTAACGATAAATCAGA+AGG | - | chr5.2:25509399-25509418 | MS.gene43898:intron | 30.0% | |
| ACTCATATGTTAATGACTTC+TGG | - | chr5.2:25506719-25506738 | MS.gene43898:CDS | 30.0% | |
| AGCTGCCTATAAATGATTAA+AGG | + | chr5.2:25510926-25510945 | None:intergenic | 30.0% | |
| ATAAAATGCCCCAAAGAATT+TGG | - | chr5.2:25509210-25509229 | MS.gene43898:intron | 30.0% | |
| ATATGAAAAGCTTAATAGGC+CGG | + | chr5.2:25508136-25508155 | None:intergenic | 30.0% | |
| ATCAATTGTAACATCCAAGA+AGG | - | chr5.2:25509662-25509681 | MS.gene43898:intron | 30.0% | |
| ATTTGTTTGCAAACAACAGA+TGG | + | chr5.2:25508739-25508758 | None:intergenic | 30.0% | |
| CAAACATATTTGTGTGCTTT+AGG | - | chr5.2:25508285-25508304 | MS.gene43898:intron | 30.0% | |
| CAAGTCTGTATATACATAGA+TGG | + | chr5.2:25510533-25510552 | None:intergenic | 30.0% | |
| CATCTATGTATATACAGACT+TGG | - | chr5.2:25510531-25510550 | MS.gene43898:intron | 30.0% | |
| CCCATATTTATTCATATTGG+TGG | - | chr5.2:25507875-25507894 | MS.gene43898:intron | 30.0% | |
| GAAGAATGTTATACACACAT+GGG | - | chr5.2:25510960-25510979 | MS.gene43898:intron | 30.0% | |
| TAGAAGTCAACTAACTAAGA+TGG | + | chr5.2:25507319-25507338 | None:intergenic | 30.0% | |
| TGAAGAATGTTATACACACA+TGG | - | chr5.2:25510959-25510978 | MS.gene43898:intron | 30.0% | |
| TGAATAAATATGGGGATAAC+GGG | + | chr5.2:25507869-25507888 | None:intergenic | 30.0% | |
| TTATCTCTACCAATCATTGA+AGG | + | chr5.2:25508968-25508987 | None:intergenic | 30.0% | |
| TTGATAGAGGTGATATTCAT+GGG | - | chr5.2:25507931-25507950 | MS.gene43898:CDS | 30.0% | |
| TTTGGTTAAATGTGTGTTAG+AGG | - | chr5.2:25507539-25507558 | MS.gene43898:intron | 30.0% | |
| TTTGTTTGCAAACAACAGAT+GGG | + | chr5.2:25508738-25508757 | None:intergenic | 30.0% | |
| ! | AGAAGATGATCAATGTGTTT+TGG | - | chr5.2:25509160-25509179 | MS.gene43898:intron | 30.0% |
| ! | AGGTTTTTAAATAGGCTTTC+AGG | - | chr5.2:25508534-25508553 | MS.gene43898:intron | 30.0% |
| ! | CAAGTGGAATTTTCCTTTTA+GGG | - | chr5.2:25510083-25510102 | MS.gene43898:intron | 30.0% |
| ! | CACAACGTGTAATTTAGAAT+CGG | - | chr5.2:25510462-25510481 | MS.gene43898:intron | 30.0% |
| ! | CTTTAGGCCTTAATAAGTTT+TGG | - | chr5.2:25508301-25508320 | MS.gene43898:intron | 30.0% |
| ! | CTTTTATCAAGGATTGTATC+TGG | - | chr5.2:25509002-25509021 | MS.gene43898:intron | 30.0% |
| ! | TATGTTCAAACCTTTAAGAG+TGG | - | chr5.2:25511014-25511033 | MS.gene43898:intron | 30.0% |
| ! | TGGATTTTATGCTGTGATAT+GGG | - | chr5.2:25511233-25511252 | MS.gene43898:intron | 30.0% |
| ! | TTATTCATATTGGTGGTTGA+GGG | - | chr5.2:25507882-25507901 | MS.gene43898:CDS | 30.0% |
| ! | TTGGATTTTATGCTGTGATA+TGG | - | chr5.2:25511232-25511251 | MS.gene43898:intron | 30.0% |
| ! | TTTATTCATATTGGTGGTTG+AGG | - | chr5.2:25507881-25507900 | MS.gene43898:CDS | 30.0% |
| ! | TTTTCAGTCGTAATATGAGT+GGG | - | chr5.2:25508870-25508889 | MS.gene43898:intron | 30.0% |
| !! | TAGTTCTGATTTGGATATGT+GGG | + | chr5.2:25509325-25509344 | None:intergenic | 30.0% |
| !! | TGTTAGTTCTGCTACTTATT+CGG | - | chr5.2:25507782-25507801 | MS.gene43898:intron | 30.0% |
| !! | TTAGTTCTGATTTGGATATG+TGG | + | chr5.2:25509326-25509345 | None:intergenic | 30.0% |
| !! | TTTTTCAGTCGTAATATGAG+TGG | - | chr5.2:25508869-25508888 | MS.gene43898:intron | 30.0% |
| !!! | CAAATGTTTCTTGTTTTGCA+TGG | - | chr5.2:25508754-25508773 | MS.gene43898:intron | 30.0% |
| !!! | CTTTTGATATAGTGGATTTG+GGG | - | chr5.2:25507694-25507713 | MS.gene43898:intron | 30.0% |
| !!! | GCTTTTGATATAGTGGATTT+GGG | - | chr5.2:25507693-25507712 | MS.gene43898:intron | 30.0% |
| !!! | GTCCGTTTTTTCTTTTATCA+AGG | - | chr5.2:25508991-25509010 | MS.gene43898:intron | 30.0% |
| AAAAAGCCTATTAAGCCCAT+CGG | - | chr5.2:25508109-25508128 | MS.gene43898:intron | 35.0% | |
| AACACAAGCCTTCATATGAT+TGG | - | chr5.2:25508202-25508221 | MS.gene43898:intron | 35.0% | |
| AAGAGAACCACAAGTAAATG+TGG | - | chr5.2:25510247-25510266 | MS.gene43898:intron | 35.0% | |
| AATATAGAAATGGGAGCAAG+TGG | - | chr5.2:25510067-25510086 | MS.gene43898:intron | 35.0% | |
| ACAGATAGCAACTGTTTATC+AGG | + | chr5.2:25510677-25510696 | None:intergenic | 35.0% | |
| AGTGGATCATATGTGTAAGA+TGG | - | chr5.2:25507482-25507501 | MS.gene43898:CDS | 35.0% | |
| ATATACAGACTTGGATTGTC+AGG | - | chr5.2:25510540-25510559 | MS.gene43898:intron | 35.0% | |
| ATATTCATGGGGTACAAGTA+GGG | - | chr5.2:25507943-25507962 | MS.gene43898:CDS | 35.0% | |
| CAAAATCGTAGTTGCAATTG+CGG | - | chr5.2:25510335-25510354 | MS.gene43898:intron | 35.0% | |
| CAATGATTGGTAGAGATAAG+AGG | - | chr5.2:25508969-25508988 | MS.gene43898:intron | 35.0% | |
| CATATGAAGGCTTGTGTTTA+TGG | + | chr5.2:25508200-25508219 | None:intergenic | 35.0% | |
| CCTTATAAAAAGCTTGAGTC+TGG | + | chr5.2:25508054-25508073 | None:intergenic | 35.0% | |
| GACCATAATTAAATCCGCAT+CGG | + | chr5.2:25510273-25510292 | None:intergenic | 35.0% | |
| GAGACAATCTTTATCTTGGA+AGG | - | chr5.2:25511070-25511089 | MS.gene43898:intron | 35.0% | |
| GCTTATGAACTTTGATAAGG+TGG | - | chr5.2:25507806-25507825 | MS.gene43898:intron | 35.0% | |
| GGCTGCCTTTAATCATTTAT+AGG | - | chr5.2:25510918-25510937 | MS.gene43898:intron | 35.0% | |
| GGGAAATCAGATTGGATAAT+TGG | - | chr5.2:25510103-25510122 | MS.gene43898:intron | 35.0% | |
| GGTGCTTATGAACTTTGATA+AGG | - | chr5.2:25507803-25507822 | MS.gene43898:intron | 35.0% | |
| TAATTAAATAGGCCAGGCTA+AGG | - | chr5.2:25508080-25508099 | MS.gene43898:CDS | 35.0% | |
| TACCACAAAACAGCAACAAA+TGG | + | chr5.2:25510594-25510613 | None:intergenic | 35.0% | |
| TATACAGACTTGGATTGTCA+GGG | - | chr5.2:25510541-25510560 | MS.gene43898:intron | 35.0% | |
| TATCACAATAGCTGTTGCAT+TGG | - | chr5.2:25510392-25510411 | MS.gene43898:intron | 35.0% | |
| TCCAATCTGATTTCCCTAAA+AGG | + | chr5.2:25510099-25510118 | None:intergenic | 35.0% | |
| TCCAGACCTTAGCATAAAAT+AGG | - | chr5.2:25508352-25508371 | MS.gene43898:intron | 35.0% | |
| TCTAGTATCAAACACCTTCT+TGG | + | chr5.2:25509679-25509698 | None:intergenic | 35.0% | |
| TCTGTTGTCAAACAAAAGCA+TGG | - | chr5.2:25511317-25511336 | MS.gene43898:CDS | 35.0% | |
| TGAATGTTGCCACAATACAA+TGG | - | chr5.2:25510426-25510445 | MS.gene43898:intron | 35.0% | |
| TGATAGAGGTGATATTCATG+GGG | - | chr5.2:25507932-25507951 | MS.gene43898:CDS | 35.0% | |
| TTCTCTTCTGTTTATTGTCC+AGG | - | chr5.2:25510159-25510178 | MS.gene43898:intron | 35.0% | |
| TTGGGAGACAATCTTTATCT+TGG | - | chr5.2:25511066-25511085 | MS.gene43898:intron | 35.0% | |
| TTGGGATTACCTTCAATGAT+TGG | - | chr5.2:25508956-25508975 | MS.gene43898:intron | 35.0% | |
| TTTCAGTCGTAATATGAGTG+GGG | - | chr5.2:25508871-25508890 | MS.gene43898:intron | 35.0% | |
| ! | ACCTATTTTATGCTAAGGTC+TGG | + | chr5.2:25508518-25508537 | None:intergenic | 35.0% |
| ! | AGCATGGGGGTTATATTTTT+GGG | - | chr5.2:25511048-25511067 | MS.gene43898:intron | 35.0% |
| ! | AGGCTTTTAAATAGGCTTTC+AGG | - | chr5.2:25508372-25508391 | MS.gene43898:intron | 35.0% |
| ! | ATACTGTGATGTGCATTTTC+AGG | - | chr5.2:25509918-25509937 | MS.gene43898:intron | 35.0% |
| ! | CCAGACTCAAGCTTTTTATA+AGG | - | chr5.2:25508051-25508070 | MS.gene43898:CDS | 35.0% |
| ! | CTTAGTTAGTTGACTTCTAC+TGG | - | chr5.2:25507320-25507339 | MS.gene43898:intron | 35.0% |
| ! | GAAAGTGGACATTTTGTTAC+CGG | + | chr5.2:25509834-25509853 | None:intergenic | 35.0% |
| ! | GCAAGTGGAATTTTCCTTTT+AGG | - | chr5.2:25510082-25510101 | MS.gene43898:intron | 35.0% |
| ! | GTCTTGTTAATAAACGAGCT+GGG | + | chr5.2:25508032-25508051 | None:intergenic | 35.0% |
| ! | GTTGATAGAGGTGATATTCA+TGG | - | chr5.2:25507930-25507949 | MS.gene43898:CDS | 35.0% |
| ! | TACTGACCTGACCTTTTTAA+AGG | + | chr5.2:25508408-25508427 | None:intergenic | 35.0% |
| ! | TAGCAAGGCTTTTGATATAG+TGG | - | chr5.2:25507686-25507705 | MS.gene43898:intron | 35.0% |
| ! | TAGCATGGGGGTTATATTTT+TGG | - | chr5.2:25511047-25511066 | MS.gene43898:intron | 35.0% |
| ! | TCATTTATAGGCAGCTTTTG+TGG | - | chr5.2:25510930-25510949 | MS.gene43898:intron | 35.0% |
| !! | AGATGATCAATGTGTTTTGG+TGG | - | chr5.2:25509163-25509182 | MS.gene43898:intron | 35.0% |
| !! | AGTTCTGATTTGGATATGTG+GGG | + | chr5.2:25509324-25509343 | None:intergenic | 35.0% |
| !! | ATGCTTTTGTTTGACAACAG+AGG | + | chr5.2:25511318-25511337 | None:intergenic | 35.0% |
| !! | ATGGGTACTGGAAAGTATTT+GGG | - | chr5.2:25508938-25508957 | MS.gene43898:intron | 35.0% |
| !! | TCCTTTTAGGGAAATCAGAT+TGG | - | chr5.2:25510095-25510114 | MS.gene43898:intron | 35.0% |
| !! | TGCTTTTGTTTGACAACAGA+GGG | + | chr5.2:25511317-25511336 | None:intergenic | 35.0% |
| !!! | ATGATCAATGTGTTTTGGTG+GGG | - | chr5.2:25509165-25509184 | MS.gene43898:intron | 35.0% |
| !!! | GATGATCAATGTGTTTTGGT+GGG | - | chr5.2:25509164-25509183 | MS.gene43898:intron | 35.0% |
| !!! | GGCTTTTGATATAGTGGATT+TGG | - | chr5.2:25507692-25507711 | MS.gene43898:intron | 35.0% |
| AAAAGCCTATTAAGCCCATC+GGG | - | chr5.2:25508110-25508129 | MS.gene43898:intron | 40.0% | |
| AAACGAATAAATGCGTGGAG+GGG | - | chr5.2:25509025-25509044 | MS.gene43898:intron | 40.0% | |
| AAATGCCCCAAAGAATTTGG+TGG | - | chr5.2:25509213-25509232 | MS.gene43898:intron | 40.0% | |
| AACTTACTTGTACCTAGAGG+TGG | + | chr5.2:25508697-25508716 | None:intergenic | 40.0% | |
| ACATGGGCATGTCATAAGAA+AGG | - | chr5.2:25510976-25510995 | MS.gene43898:intron | 40.0% | |
| ACCCATTCCACCAAATTCTT+TGG | + | chr5.2:25509223-25509242 | None:intergenic | 40.0% | |
| ACTTATTGGTGCAGCTTGAT+TGG | - | chr5.2:25511192-25511211 | MS.gene43898:intron | 40.0% | |
| AGAAAAGACAAGCTTCCTAC+CGG | + | chr5.2:25507198-25507217 | None:intergenic | 40.0% | |
| AGTGCAATGACCACTCTTAA+AGG | + | chr5.2:25511027-25511046 | None:intergenic | 40.0% | |
| ATTGTAGCTCTCATTGCAGA+GGG | - | chr5.2:25510626-25510645 | MS.gene43898:intron | 40.0% | |
| CAAGTATGAAGGTGAAAGCA+GGG | + | chr5.2:25506793-25506812 | None:intergenic | 40.0% | |
| CAGAGGGAAATTCAAATGCT+TGG | - | chr5.2:25510642-25510661 | MS.gene43898:intron | 40.0% | |
| CCATTCCACCAAATTCTTTG+GGG | + | chr5.2:25509221-25509240 | None:intergenic | 40.0% | |
| CCCATTCCACCAAATTCTTT+GGG | + | chr5.2:25509222-25509241 | None:intergenic | 40.0% | |
| CTATGACTCTGATTGTGATC+CGG | - | chr5.2:25509812-25509831 | MS.gene43898:intron | 40.0% | |
| CTCTAGGTACAAGTAAGTTG+CGG | - | chr5.2:25508698-25508717 | MS.gene43898:intron | 40.0% | |
| GAAACGAATAAATGCGTGGA+GGG | - | chr5.2:25509024-25509043 | MS.gene43898:intron | 40.0% | |
| GAGGATTTGTCACGCATTAT+TGG | - | chr5.2:25508902-25508921 | MS.gene43898:intron | 40.0% | |
| GATATTCATGGGGTACAAGT+AGG | - | chr5.2:25507942-25507961 | MS.gene43898:CDS | 40.0% | |
| GCGGATTTAATTATGGTCGT+AGG | - | chr5.2:25510275-25510294 | MS.gene43898:intron | 40.0% | |
| GGAGCTGCTATCATAGTTAT+TGG | - | chr5.2:25511213-25511232 | MS.gene43898:intron | 40.0% | |
| GTGTTTGATACTAGAGACCA+AGG | - | chr5.2:25509684-25509703 | MS.gene43898:intron | 40.0% | |
| TAAATTCAGTTCTCCCACGT+TGG | - | chr5.2:25506745-25506764 | MS.gene43898:CDS | 40.0% | |
| TAACACACATCATCATCCAC+TGG | + | chr5.2:25507767-25507786 | None:intergenic | 40.0% | |
| TAATCGACTGAAACGGTGTT+TGG | - | chr5.2:25507521-25507540 | MS.gene43898:intron | 40.0% | |
| TATTCATGGGGTACAAGTAG+GGG | - | chr5.2:25507944-25507963 | MS.gene43898:CDS | 40.0% | |
| TCATAGATAGGATACGTTCC+CGG | - | chr5.2:25507176-25507195 | MS.gene43898:intron | 40.0% | |
| TCTGGAAACGAATAAATGCG+TGG | - | chr5.2:25509020-25509039 | MS.gene43898:intron | 40.0% | |
| TGGCCTACTTCAAAAATGCT+AGG | + | chr5.2:25508634-25508653 | None:intergenic | 40.0% | |
| TGTTGCGAACCATTGTATTG+TGG | + | chr5.2:25510438-25510457 | None:intergenic | 40.0% | |
| TTGTACCTAGAGGTGGAAAT+GGG | + | chr5.2:25508690-25508709 | None:intergenic | 40.0% | |
| ! | ATCAGGCCTTTAAAAAGGTC+AGG | - | chr5.2:25508399-25508418 | MS.gene43898:intron | 40.0% |
| ! | ATTGGTGTCCAACATGTGAT+GGG | - | chr5.2:25508920-25508939 | MS.gene43898:intron | 40.0% |
| ! | CCCAAAGAATTTGGTGGAAT+GGG | - | chr5.2:25509219-25509238 | MS.gene43898:intron | 40.0% |
| ! | GCCTATTTTATGCTAAGGTC+TGG | + | chr5.2:25508356-25508375 | None:intergenic | 40.0% |
| ! | GCTTCATCAGGCCTTTAAAA+AGG | - | chr5.2:25508394-25508413 | MS.gene43898:intron | 40.0% |
| ! | GTGTTTATCACTAGCTCTTC+TGG | + | chr5.2:25510572-25510591 | None:intergenic | 40.0% |
| ! | TATGAAAAAGCATAGCAGCC+AGG | - | chr5.2:25509955-25509974 | MS.gene43898:intron | 40.0% |
| ! | TATTGGTGTCCAACATGTGA+TGG | - | chr5.2:25508919-25508938 | MS.gene43898:intron | 40.0% |
| !! | GATGGGTACTGGAAAGTATT+TGG | - | chr5.2:25508937-25508956 | MS.gene43898:intron | 40.0% |
| !! | GCTTTTGTTTGACAACAGAG+GGG | + | chr5.2:25511316-25511335 | None:intergenic | 40.0% |
| !! | GGTCTTGTTAATAAACGAGC+TGG | + | chr5.2:25508033-25508052 | None:intergenic | 40.0% |
| !! | GTTTTGGCCTATTTAGGAGT+AGG | - | chr5.2:25508317-25508336 | MS.gene43898:intron | 40.0% |
| !! | TGTGATGTGCATTTTCAGGA+TGG | - | chr5.2:25509922-25509941 | MS.gene43898:intron | 40.0% |
| !!! | AAAACTTTTGAGGCAGCATC+TGG | - | chr5.2:25508815-25508834 | MS.gene43898:intron | 40.0% |
| !!! | AGGCCTAGCATTTTTGAAGT+AGG | - | chr5.2:25508628-25508647 | MS.gene43898:intron | 40.0% |
| !!! | CACCATTTGTTGCTGTTTTG+TGG | - | chr5.2:25510589-25510608 | MS.gene43898:intron | 40.0% |
| !!! | CTTTTTTGAAAGCCTTAGCC+TGG | + | chr5.2:25508095-25508114 | None:intergenic | 40.0% |
| !!! | TAGCATTTTTGAAGTAGGCC+AGG | - | chr5.2:25508633-25508652 | MS.gene43898:intron | 40.0% |
| AACAATAGCTGAAGCCAACG+TGG | + | chr5.2:25506762-25506781 | None:intergenic | 45.0% | |
| ACAAGTAAATGTGGCCGATG+CGG | - | chr5.2:25510256-25510275 | MS.gene43898:intron | 45.0% | |
| ACAATAGCTGAAGCCAACGT+GGG | + | chr5.2:25506761-25506780 | None:intergenic | 45.0% | |
| ACGTGTTGTCCAGTATAGAG+TGG | + | chr5.2:25507587-25507606 | None:intergenic | 45.0% | |
| AGACAATCCACTCAACGAAG+AGG | - | chr5.2:25507619-25507638 | MS.gene43898:intron | 45.0% | |
| AGCAGCCAGGCAAAAGTTAT+TGG | - | chr5.2:25509968-25509987 | MS.gene43898:intron | 45.0% | |
| AGTGGTCATTGCACTTAGCA+TGG | - | chr5.2:25511032-25511051 | MS.gene43898:intron | 45.0% | |
| ATAGGCTTTCAGGCTTCATC+AGG | - | chr5.2:25508382-25508401 | MS.gene43898:intron | 45.0% | |
| CATGGTGTGCTTATGCGAAT+TGG | - | chr5.2:25507723-25507742 | MS.gene43898:intron | 45.0% | |
| CATTGTAGCTCTCATTGCAG+AGG | - | chr5.2:25510625-25510644 | MS.gene43898:intron | 45.0% | |
| CCTCGAAAATGAGCCTATGA+CGG | - | chr5.2:25508589-25508608 | MS.gene43898:intron | 45.0% | |
| CCTCTCGACTCTAATACACA+AGG | - | chr5.2:25507905-25507924 | MS.gene43898:CDS | 45.0% | |
| CCTTGTGTATTAGAGTCGAG+AGG | + | chr5.2:25507908-25507927 | None:intergenic | 45.0% | |
| CGCAACTTACTTGTACCTAG+AGG | + | chr5.2:25508700-25508719 | None:intergenic | 45.0% | |
| CTCGAAAATGAGCCTATGAC+GGG | - | chr5.2:25508590-25508609 | MS.gene43898:intron | 45.0% | |
| CTCGACTCTAATACACAAGG+CGG | - | chr5.2:25507908-25507927 | MS.gene43898:CDS | 45.0% | |
| CTCTGCAATGAGAGCTACAA+TGG | + | chr5.2:25510627-25510646 | None:intergenic | 45.0% | |
| CTTGTACCTAGAGGTGGAAA+TGG | + | chr5.2:25508691-25508710 | None:intergenic | 45.0% | |
| CTTTAAATAGGCTAGGCCGT+AGG | + | chr5.2:25507999-25508018 | None:intergenic | 45.0% | |
| GAAAAGACAAGCTTCCTACC+GGG | + | chr5.2:25507197-25507216 | None:intergenic | 45.0% | |
| GAATTGGAGTCGGTGAGAAA+TGG | - | chr5.2:25507739-25507758 | MS.gene43898:intron | 45.0% | |
| GCAAGTATGAAGGTGAAAGC+AGG | + | chr5.2:25506794-25506813 | None:intergenic | 45.0% | |
| GCAATTGCGGCCGAATATAA+AGG | - | chr5.2:25510348-25510367 | MS.gene43898:intron | 45.0% | |
| GGAAACGAATAAATGCGTGG+AGG | - | chr5.2:25509023-25509042 | MS.gene43898:intron | 45.0% | |
| GGCAAAAGTTATTGGCACAG+TGG | - | chr5.2:25509976-25509995 | MS.gene43898:intron | 45.0% | |
| GGCCGATGCGGATTTAATTA+TGG | - | chr5.2:25510268-25510287 | MS.gene43898:intron | 45.0% | |
| GTGCTTATGCGAATTGGAGT+CGG | - | chr5.2:25507729-25507748 | MS.gene43898:intron | 45.0% | |
| GTGGTCATTGCACTTAGCAT+GGG | - | chr5.2:25511033-25511052 | MS.gene43898:intron | 45.0% | |
| TCAACGAAGAGGAAGTCGAA+GGG | - | chr5.2:25507630-25507649 | MS.gene43898:intron | 45.0% | |
| TGCTCGCTAATCGACTGAAA+CGG | - | chr5.2:25507514-25507533 | MS.gene43898:intron | 45.0% | |
| TGGTCATTGCACTTAGCATG+GGG | - | chr5.2:25511034-25511053 | MS.gene43898:intron | 45.0% | |
| TGTTGAGGTCCACTCTATAC+TGG | - | chr5.2:25507575-25507594 | MS.gene43898:intron | 45.0% | |
| TTCCAGTACCCATCACATGT+TGG | + | chr5.2:25508931-25508950 | None:intergenic | 45.0% | |
| ! | AGCCTATTTAAAGCCCAGCT+CGG | - | chr5.2:25508006-25508025 | MS.gene43898:CDS | 45.0% |
| ! | AGCGATTTTCGTATGAGCTG+AGG | - | chr5.2:25509285-25509304 | MS.gene43898:intron | 45.0% |
| ! | CCCCAAAGAATTTGGTGGAA+TGG | - | chr5.2:25509218-25509237 | MS.gene43898:intron | 45.0% |
| ! | CTGTGCCAATAACTTTTGCC+TGG | + | chr5.2:25509976-25509995 | None:intergenic | 45.0% |
| ! | GCCTGACCTGACCTTTTTAA+AGG | + | chr5.2:25508570-25508589 | None:intergenic | 45.0% |
| ! | GCCTTTAAAAAGGTCAGGTC+AGG | - | chr5.2:25508404-25508423 | MS.gene43898:intron | 45.0% |
| ! | GTGGATTTGGGGTTTCTTCA+TGG | - | chr5.2:25507705-25507724 | MS.gene43898:intron | 45.0% |
| ! | TGATTTGGATATGTGGGGCT+GGG | + | chr5.2:25509319-25509338 | None:intergenic | 45.0% |
| !! | AGCTGGGCTTTAAATAGGCT+AGG | + | chr5.2:25508006-25508025 | None:intergenic | 45.0% |
| !! | ATACACAAGGCGGTTGATAG+AGG | - | chr5.2:25507918-25507937 | MS.gene43898:CDS | 45.0% |
| !! | ATGAGCCTATGACGGGTAAT+AGG | - | chr5.2:25508597-25508616 | MS.gene43898:intron | 45.0% |
| !! | CTTCGTTGAGTGGATTGTCT+TGG | + | chr5.2:25507619-25507638 | None:intergenic | 45.0% |
| !!! | ATCAATGTGTTTTGGTGGGG+AGG | - | chr5.2:25509168-25509187 | MS.gene43898:intron | 45.0% |
| !!! | CTTGTTTTGCATGGCCAATG+TGG | - | chr5.2:25508763-25508782 | MS.gene43898:intron | 45.0% |
| !!! | CTTTGGGGCATTTTATCTCG+CGG | + | chr5.2:25509206-25509225 | None:intergenic | 45.0% |
| !!! | TTTTGAAGTAGGCCAGGCTT+AGG | - | chr5.2:25508639-25508658 | MS.gene43898:intron | 45.0% |
| !! | TTATTATCATTATTATTATT+AGG | - | chr5.2:25510720-25510739 | MS.gene43898:intron | 5.0% |
| AAAAATGCTAGGCCTGAGCC+TGG | + | chr5.2:25508623-25508642 | None:intergenic | 50.0% | |
| AACAACAGATGGGACACCAC+TGG | + | chr5.2:25508728-25508747 | None:intergenic | 50.0% | |
| AACCCTTGGCTGGGTACAAT+AGG | + | chr5.2:25507834-25507853 | None:intergenic | 50.0% | |
| ACGTTGTGCTTCCACCACAT+TGG | + | chr5.2:25508780-25508799 | None:intergenic | 50.0% | |
| AGATAGGATACGTTCCCGGT+AGG | - | chr5.2:25507180-25507199 | MS.gene43898:intron | 50.0% | |
| AGCATTGTCGAAGGAAGGGA+AGG | - | chr5.2:25509051-25509070 | MS.gene43898:intron | 50.0% | |
| AGCCTATTGTACCCAGCCAA+GGG | - | chr5.2:25507829-25507848 | MS.gene43898:intron | 50.0% | |
| CACAGTGGTCTCTATTGCAG+GGG | - | chr5.2:25509991-25510010 | MS.gene43898:intron | 50.0% | |
| CAGTCGTAATATGAGTGGGG+CGG | - | chr5.2:25508874-25508893 | MS.gene43898:intron | 50.0% | |
| CTCAACGAAGAGGAAGTCGA+AGG | - | chr5.2:25507629-25507648 | MS.gene43898:intron | 50.0% | |
| GAAGGGATGGAGAGAGGAAT+TGG | - | chr5.2:25507647-25507666 | MS.gene43898:intron | 50.0% | |
| GACTTTGTAAGGCCTAAGCC+TGG | + | chr5.2:25508654-25508673 | None:intergenic | 50.0% | |
| GATATGGGCACAAGCTCAAG+AGG | - | chr5.2:25511248-25511267 | MS.gene43898:CDS | 50.0% | |
| GCACAGTGGTCTCTATTGCA+GGG | - | chr5.2:25509990-25510009 | MS.gene43898:intron | 50.0% | |
| GGCTTAGGCCTTACAAAGTC+CGG | - | chr5.2:25508654-25508673 | MS.gene43898:intron | 50.0% | |
| GGTCATTGCACTTAGCATGG+GGG | - | chr5.2:25511035-25511054 | MS.gene43898:intron | 50.0% | |
| GTACAAGTAGGGGTGGGAAT+AGG | - | chr5.2:25507954-25507973 | MS.gene43898:CDS | 50.0% | |
| TCGACTTCCTCTTCGTTGAG+TGG | + | chr5.2:25507629-25507648 | None:intergenic | 50.0% | |
| TCGGTGAGAAATGGATCCAG+TGG | - | chr5.2:25507748-25507767 | MS.gene43898:intron | 50.0% | |
| ! | CCGTCATAGGCTCATTTTCG+AGG | + | chr5.2:25508592-25508611 | None:intergenic | 50.0% |
| ! | GACGAGCATTGTCGAAGGAA+GGG | - | chr5.2:25509047-25509066 | MS.gene43898:intron | 50.0% |
| ! | GCATCGGCCACATTTACTTG+TGG | + | chr5.2:25510257-25510276 | None:intergenic | 50.0% |
| ! | GGAGCAGTCTGTGTTTGTTG+AGG | - | chr5.2:25507560-25507579 | MS.gene43898:intron | 50.0% |
| ! | GGTGCTTTTCTTCTTGCAGC+TGG | - | chr5.2:25510124-25510143 | MS.gene43898:intron | 50.0% |
| ! | GTTTTGCATGGCCAATGTGG+TGG | - | chr5.2:25508766-25508785 | MS.gene43898:intron | 50.0% |
| !! | CTGATTTGGATATGTGGGGC+TGG | + | chr5.2:25509320-25509339 | None:intergenic | 50.0% |
| !! | GTCCAACATGTGATGGGTAC+TGG | - | chr5.2:25508926-25508945 | MS.gene43898:intron | 50.0% |
| !!! | ATGTGTTTTGGTGGGGAGGA+AGG | - | chr5.2:25509172-25509191 | MS.gene43898:intron | 50.0% |
| CATGGGGTACAAGTAGGGGT+GGG | - | chr5.2:25507948-25507967 | MS.gene43898:CDS | 55.0% | |
| CCTAGCCCATTTCCACCTCT+AGG | - | chr5.2:25508682-25508701 | MS.gene43898:intron | 55.0% | |
| CCTGGCCTATTACCCGTCAT+AGG | + | chr5.2:25508605-25508624 | None:intergenic | 55.0% | |
| CGAAGAGGAAGTCGAAGGGA+TGG | - | chr5.2:25507634-25507653 | MS.gene43898:intron | 55.0% | |
| GAAGTCGAAGGGATGGAGAG+AGG | - | chr5.2:25507641-25507660 | MS.gene43898:intron | 55.0% | |
| GAGCCTATTGTACCCAGCCA+AGG | - | chr5.2:25507828-25507847 | MS.gene43898:intron | 55.0% | |
| GGCACAGTGGTCTCTATTGC+AGG | - | chr5.2:25509989-25510008 | MS.gene43898:intron | 55.0% | |
| TCATGGGGTACAAGTAGGGG+TGG | - | chr5.2:25507947-25507966 | MS.gene43898:CDS | 55.0% | |
| ! | CCTAGAGGTGGAAATGGGCT+AGG | + | chr5.2:25508685-25508704 | None:intergenic | 55.0% |
| ! | GGACGAGCATTGTCGAAGGA+AGG | - | chr5.2:25509046-25509065 | MS.gene43898:intron | 55.0% |
| !! | CCTATGACGGGTAATAGGCC+AGG | - | chr5.2:25508602-25508621 | MS.gene43898:intron | 55.0% |
| !! | GGCCGAGCTGGGCTTTAAAT+AGG | + | chr5.2:25508011-25508030 | None:intergenic | 55.0% |
| ACGGGTAATAGGCCAGGCTC+AGG | - | chr5.2:25508608-25508627 | MS.gene43898:intron | 60.0% | |
| AGCTTAATAGGCCGGCCCGA+TGG | + | chr5.2:25508128-25508147 | None:intergenic | 60.0% | |
| AGGCCTTACAAAGTCCGGCC+CGG | - | chr5.2:25508659-25508678 | MS.gene43898:intron | 60.0% | |
| AGTAAGTTGCGGCGCACCAG+TGG | - | chr5.2:25508709-25508728 | MS.gene43898:intron | 60.0% | |
| AGTAGGGGTGGGAATAGGCC+AGG | - | chr5.2:25507959-25507978 | MS.gene43898:CDS | 60.0% | |
| ATAAACGAGCTGGGCCGAGC+TGG | + | chr5.2:25508023-25508042 | None:intergenic | 60.0% | |
| GCCTATTAAGCCCATCGGGC+CGG | - | chr5.2:25508114-25508133 | MS.gene43898:intron | 60.0% | |
| GCTTAATAGGCCGGCCCGAT+GGG | + | chr5.2:25508127-25508146 | None:intergenic | 60.0% | |
| TAAACGAGCTGGGCCGAGCT+GGG | + | chr5.2:25508022-25508041 | None:intergenic | 60.0% | |
| ! | GAGGGGACGAGCATTGTCGA+AGG | - | chr5.2:25509042-25509061 | MS.gene43898:intron | 60.0% |
| !! | AGGTGGAAATGGGCTAGGCC+GGG | + | chr5.2:25508680-25508699 | None:intergenic | 60.0% |
| !! | ATGGGGATAACGGGTCACCC+TGG | + | chr5.2:25507860-25507879 | None:intergenic | 60.0% |
| !! | GAGGTGGAAATGGGCTAGGC+CGG | + | chr5.2:25508681-25508700 | None:intergenic | 60.0% |
| AATAGGCCAGGCCGTCCGAC+AGG | - | chr5.2:25507971-25507990 | MS.gene43898:CDS | 65.0% | |
| AGGCCGGGCCGGACTTTGTA+AGG | + | chr5.2:25508665-25508684 | None:intergenic | 65.0% | |
| ATAGGCCAGGCCGTCCGACA+GGG | - | chr5.2:25507972-25507991 | MS.gene43898:CDS | 65.0% | |
| TATGAGTGGGGCGGCGCAAG+AGG | - | chr5.2:25508883-25508902 | MS.gene43898:intron | 65.0% | |
| ! | GCCGGCCCGATGGGCTTAAT+AGG | + | chr5.2:25508118-25508137 | None:intergenic | 65.0% |
| ACCCAGCCAAGGGTTGCGCC+AGG | - | chr5.2:25507839-25507858 | MS.gene43898:intron | 70.0% | |
| ACCCTGGCGCAACCCTTGGC+TGG | + | chr5.2:25507844-25507863 | None:intergenic | 70.0% | |
| CCCAGCCAAGGGTTGCGCCA+GGG | - | chr5.2:25507840-25507859 | MS.gene43898:intron | 70.0% | |
| CCCTGGCGCAACCCTTGGCT+GGG | + | chr5.2:25507843-25507862 | None:intergenic | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+CGG | + | chr5.2:25507989-25508008 | None:intergenic | 70.0% | |
| GGTCACCCTGGCGCAACCCT+TGG | + | chr5.2:25507848-25507867 | None:intergenic | 70.0% | |
| TAGGCCAGGCCGTCCGACAG+GGG | - | chr5.2:25507973-25507992 | MS.gene43898:CDS | 70.0% | |
| !! | GGAAATGGGCTAGGCCGGGC+CGG | + | chr5.2:25508676-25508695 | None:intergenic | 70.0% |
| GGCCGTAGGCCCCTGTCGGA+CGG | + | chr5.2:25507985-25508004 | None:intergenic | 75.0% | |
| GGCCGTCCGACAGGGGCCTA+CGG | - | chr5.2:25507980-25507999 | MS.gene43898:CDS | 75.0% | |
| TAGGCCCCTGTCGGACGGCC+TGG | + | chr5.2:25507980-25507999 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 25506712 | 25511347 | 25506712 | ID=MS.gene43898 |
| chr5.2 | mRNA | 25506712 | 25511347 | 25506712 | ID=MS.gene43898.t1;Parent=MS.gene43898 |
| chr5.2 | exon | 25511234 | 25511347 | 25511234 | ID=MS.gene43898.t1.exon1;Parent=MS.gene43898.t1 |
| chr5.2 | CDS | 25511234 | 25511347 | 25511234 | ID=cds.MS.gene43898.t1;Parent=MS.gene43898.t1 |
| chr5.2 | exon | 25507879 | 25508119 | 25507879 | ID=MS.gene43898.t1.exon2;Parent=MS.gene43898.t1 |
| chr5.2 | CDS | 25507879 | 25508119 | 25507879 | ID=cds.MS.gene43898.t1;Parent=MS.gene43898.t1 |
| chr5.2 | exon | 25507353 | 25507511 | 25507353 | ID=MS.gene43898.t1.exon3;Parent=MS.gene43898.t1 |
| chr5.2 | CDS | 25507353 | 25507511 | 25507353 | ID=cds.MS.gene43898.t1;Parent=MS.gene43898.t1 |
| chr5.2 | exon | 25506968 | 25507119 | 25506968 | ID=MS.gene43898.t1.exon4;Parent=MS.gene43898.t1 |
| chr5.2 | CDS | 25506968 | 25507119 | 25506968 | ID=cds.MS.gene43898.t1;Parent=MS.gene43898.t1 |
| chr5.2 | exon | 25506712 | 25506853 | 25506712 | ID=MS.gene43898.t1.exon5;Parent=MS.gene43898.t1 |
| chr5.2 | CDS | 25506712 | 25506853 | 25506712 | ID=cds.MS.gene43898.t1;Parent=MS.gene43898.t1 |
| Gene Sequence |
| Protein sequence |
