Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051064.t1 | XP_003627374.1 | 95.8 | 236 | 7 | 2 | 1 | 234 | 1 | 235 | 4.10E-118 | 434.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051064.t1 | A9BNG6 | 47.0 | 83 | 40 | 1 | 10 | 92 | 5 | 83 | 6.8e-13 | 75.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051064.t1 | G7L8C9 | 95.8 | 236 | 7 | 2 | 1 | 234 | 1 | 235 | 3.0e-118 | 434.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051064 | MS.gene052176 | 0.823801 | 1.14E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene052389 | 0.830244 | 3.28E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene052586 | 0.815486 | 9.02E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene055225 | 0.820971 | 5.17E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene055701 | 0.800696 | 1.28E-48 | -1.69E-46 |
| MS.gene051064 | MS.gene056087 | 0.818585 | 1.82E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene058498 | 0.866457 | 2.81E-65 | -1.69E-46 |
| MS.gene051064 | MS.gene058500 | 0.863094 | 3.18E-64 | -1.69E-46 |
| MS.gene051064 | MS.gene058502 | 0.802068 | 6.69E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene060879 | 0.84323 | 1.59E-58 | -1.69E-46 |
| MS.gene051064 | MS.gene063745 | 0.823119 | 1.64E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene063750 | 0.842294 | 2.82E-58 | -1.69E-46 |
| MS.gene051064 | MS.gene064687 | 0.813504 | 2.48E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene066617 | 0.803875 | 2.83E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene067310 | 0.850507 | 1.62E-60 | -1.69E-46 |
| MS.gene051064 | MS.gene06941 | 0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene070166 | 0.816436 | 5.54E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene074219 | 0.819626 | 1.05E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene074464 | 0.966221 | 1.24E-125 | -1.69E-46 |
| MS.gene051064 | MS.gene074585 | 0.984555 | 6.68E-161 | -1.69E-46 |
| MS.gene051064 | MS.gene08256 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene051064 | MS.gene09191 | 0.81296 | 3.26E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene09696 | 0.810085 | 1.37E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene09952 | 0.835495 | 1.62E-56 | -1.69E-46 |
| MS.gene051064 | MS.gene20600 | 0.852381 | 4.79E-61 | -1.69E-46 |
| MS.gene051064 | MS.gene21149 | 0.830703 | 2.53E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene21509 | 0.836621 | 8.41E-57 | -1.69E-46 |
| MS.gene051064 | MS.gene22376 | -0.83346 | 5.27E-56 | -1.69E-46 |
| MS.gene051064 | MS.gene22691 | 0.813845 | 2.08E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene23428 | 0.820581 | 6.36E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene25078 | 0.998574 | 3.22E-269 | -1.69E-46 |
| MS.gene051064 | MS.gene26728 | 0.837894 | 3.97E-57 | -1.69E-46 |
| MS.gene051064 | MS.gene26964 | 0.800403 | 1.47E-48 | -1.69E-46 |
| MS.gene051064 | MS.gene29763 | 0.800017 | 1.76E-48 | -1.69E-46 |
| MS.gene051064 | MS.gene31116 | 0.805305 | 1.42E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene32231 | 0.821392 | 4.14E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene33045 | 0.829448 | 5.12E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene33129 | 0.86718 | 1.65E-65 | -1.69E-46 |
| MS.gene051064 | MS.gene33483 | 0.819169 | 1.34E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene36229 | 0.841485 | 4.62E-58 | -1.69E-46 |
| MS.gene051064 | MS.gene36231 | 0.837553 | 4.86E-57 | -1.69E-46 |
| MS.gene051064 | MS.gene36447 | -0.815871 | 7.40E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene37887 | 0.813954 | 1.97E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene37895 | 0.83762 | 4.67E-57 | -1.69E-46 |
| MS.gene051064 | MS.gene37898 | 0.811211 | 7.84E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene38584 | 0.828449 | 8.94E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene39376 | -0.821053 | 4.95E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene39464 | 0.808157 | 3.55E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene39695 | -0.831355 | 1.75E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene40031 | 0.840691 | 7.46E-58 | -1.69E-46 |
| MS.gene051064 | MS.gene40815 | 0.825563 | 4.38E-54 | -1.69E-46 |
| MS.gene051064 | MS.gene42320 | 0.835775 | 1.38E-56 | -1.69E-46 |
| MS.gene051064 | MS.gene43898 | 0.83263 | 8.47E-56 | -1.69E-46 |
| MS.gene051064 | MS.gene46130 | 0.8347 | 2.58E-56 | -1.69E-46 |
| MS.gene051064 | MS.gene48435 | 0.821821 | 3.29E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene48607 | 0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene49602 | 0.805546 | 1.27E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene50031 | 0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene50293 | 0.807757 | 4.33E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene51542 | 0.877174 | 7.76E-69 | -1.69E-46 |
| MS.gene051064 | MS.gene51544 | 0.864604 | 1.08E-64 | -1.69E-46 |
| MS.gene051064 | MS.gene51546 | 0.801897 | 7.25E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene51650 | 0.810278 | 1.25E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene54200 | 0.848374 | 6.39E-60 | -1.69E-46 |
| MS.gene051064 | MS.gene54202 | 0.818226 | 2.19E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene54711 | 0.824635 | 7.26E-54 | -1.69E-46 |
| MS.gene051064 | MS.gene56285 | 0.83998 | 1.15E-57 | -1.69E-46 |
| MS.gene051064 | MS.gene56491 | 0.817904 | 2.59E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene56970 | 0.823758 | 1.17E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene57721 | 0.813168 | 2.93E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene58726 | 0.823725 | 1.19E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene58775 | 0.821725 | 3.47E-53 | -1.69E-46 |
| MS.gene051064 | MS.gene60568 | 0.801092 | 1.06E-48 | -1.69E-46 |
| MS.gene051064 | MS.gene63539 | 0.833854 | 4.20E-56 | -1.69E-46 |
| MS.gene051064 | MS.gene68340 | 0.812767 | 3.59E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene72927 | 0.807737 | 4.37E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene73459 | -0.8152 | 1.04E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene75626 | 0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene051064 | MS.gene77231 | 0.807752 | 4.34E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene77478 | 0.802057 | 6.72E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene77579 | 0.841908 | 3.57E-58 | -1.69E-46 |
| MS.gene051064 | MS.gene77971 | -0.824909 | 6.25E-54 | -1.69E-46 |
| MS.gene051064 | MS.gene77972 | -0.83074 | 2.48E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene78629 | -0.826309 | 2.91E-54 | -1.69E-46 |
| MS.gene051064 | MS.gene78896 | 0.801002 | 1.11E-48 | -1.69E-46 |
| MS.gene051064 | MS.gene81670 | 0.810044 | 1.40E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene83683 | 0.802232 | 6.19E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene85287 | 0.814336 | 1.62E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene86660 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene051064 | MS.gene89049 | 0.837298 | 5.65E-57 | -1.69E-46 |
| MS.gene051064 | MS.gene95457 | 0.814531 | 1.47E-51 | -1.69E-46 |
| MS.gene051064 | MS.gene96508 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene96572 | 0.810363 | 1.20E-50 | -1.69E-46 |
| MS.gene051064 | MS.gene98241 | 0.803357 | 3.62E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene98533 | 0.831706 | 1.43E-55 | -1.69E-46 |
| MS.gene051064 | MS.gene99076 | 0.808575 | 2.90E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051064.t1 | MTR_8g022310 | 96.186 | 236 | 6 | 2 | 1 | 234 | 1 | 235 | 2.72e-165 | 456 |
| MS.gene051064.t1 | MTR_8g022310 | 87.037 | 216 | 20 | 1 | 1 | 216 | 1 | 208 | 1.01e-134 | 377 |
| MS.gene051064.t1 | MTR_8g022310 | 97.861 | 187 | 4 | 0 | 1 | 187 | 1 | 187 | 3.25e-134 | 375 |
| MS.gene051064.t1 | MTR_8g022310 | 97.861 | 187 | 4 | 0 | 1 | 187 | 1 | 187 | 7.40e-134 | 375 |
| MS.gene051064.t1 | MTR_8g022310 | 93.878 | 147 | 6 | 2 | 90 | 234 | 7 | 152 | 6.59e-86 | 251 |
| MS.gene051064.t1 | MTR_8g022310 | 96.429 | 112 | 4 | 0 | 76 | 187 | 1 | 112 | 2.95e-73 | 219 |
| MS.gene051064.t1 | MTR_7g112360 | 41.176 | 153 | 80 | 5 | 11 | 162 | 17 | 160 | 1.47e-30 | 111 |
| MS.gene051064.t1 | MTR_4g085070 | 44.094 | 127 | 64 | 4 | 16 | 138 | 18 | 141 | 8.58e-28 | 103 |
| MS.gene051064.t1 | MTR_7g112360 | 50.617 | 81 | 38 | 1 | 11 | 91 | 17 | 95 | 2.22e-23 | 91.3 |
| MS.gene051064.t1 | MTR_2g014480 | 45.122 | 82 | 38 | 2 | 10 | 91 | 4 | 78 | 2.10e-15 | 74.3 |
| MS.gene051064.t1 | MTR_7g101070 | 49.333 | 75 | 33 | 1 | 6 | 80 | 354 | 423 | 2.17e-15 | 75.1 |
| MS.gene051064.t1 | MTR_2g090705 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 4.84e-15 | 73.6 |
| MS.gene051064.t1 | MTR_4g109510 | 53.731 | 67 | 29 | 1 | 12 | 78 | 10 | 74 | 1.33e-14 | 72.8 |
| MS.gene051064.t1 | MTR_4g015840 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 5.22e-14 | 70.5 |
| MS.gene051064.t1 | MTR_2g014470 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 6.43e-14 | 70.1 |
| MS.gene051064.t1 | MTR_4g078850 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 1.01e-13 | 69.7 |
| MS.gene051064.t1 | MTR_2g436580 | 45.000 | 80 | 37 | 2 | 9 | 88 | 109 | 181 | 2.83e-13 | 67.4 |
| MS.gene051064.t1 | MTR_7g092380 | 37.736 | 106 | 56 | 3 | 4 | 105 | 16 | 115 | 3.32e-13 | 67.8 |
| MS.gene051064.t1 | MTR_5g065860 | 37.895 | 95 | 44 | 3 | 7 | 97 | 45 | 128 | 3.47e-13 | 65.1 |
| MS.gene051064.t1 | MTR_3g108020 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 4.37e-13 | 67.8 |
| MS.gene051064.t1 | MTR_7g109340 | 50.000 | 68 | 28 | 2 | 11 | 78 | 27 | 88 | 6.79e-12 | 64.3 |
| MS.gene051064.t1 | MTR_1g110310 | 41.026 | 78 | 40 | 1 | 9 | 86 | 15 | 86 | 7.26e-12 | 64.7 |
| MS.gene051064.t1 | MTR_5g012530 | 42.254 | 71 | 38 | 1 | 9 | 79 | 11 | 78 | 1.03e-11 | 64.3 |
| MS.gene051064.t1 | MTR_6g027110 | 47.143 | 70 | 34 | 2 | 10 | 78 | 2 | 69 | 1.07e-11 | 61.2 |
| MS.gene051064.t1 | MTR_1g052110 | 42.500 | 80 | 39 | 2 | 8 | 86 | 36 | 109 | 1.49e-11 | 63.2 |
| MS.gene051064.t1 | MTR_2g436560 | 41.250 | 80 | 40 | 2 | 1 | 80 | 95 | 167 | 4.45e-11 | 62.0 |
| MS.gene051064.t1 | MTR_6g026940 | 48.485 | 66 | 31 | 2 | 10 | 74 | 2 | 65 | 7.89e-11 | 59.7 |
| MS.gene051064.t1 | MTR_3g087030 | 44.928 | 69 | 31 | 1 | 10 | 78 | 82 | 143 | 8.62e-11 | 61.6 |
| MS.gene051064.t1 | MTR_6g027030 | 47.143 | 70 | 34 | 2 | 10 | 78 | 2 | 69 | 9.72e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051064.t1 | AT3G14200 | 51.082 | 231 | 89 | 9 | 10 | 231 | 12 | 227 | 5.08e-59 | 186 |
| MS.gene051064.t1 | AT1G72416 | 63.810 | 105 | 25 | 2 | 10 | 109 | 5 | 101 | 1.88e-40 | 137 |
| MS.gene051064.t1 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 2.52e-40 | 137 |
| MS.gene051064.t1 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 2.67e-40 | 137 |
| MS.gene051064.t1 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 6.97e-40 | 136 |
| MS.gene051064.t1 | AT1G56300 | 50.376 | 133 | 57 | 4 | 1 | 129 | 1 | 128 | 8.01e-33 | 117 |
| MS.gene051064.t1 | AT1G71000 | 48.611 | 144 | 58 | 6 | 4 | 139 | 2 | 137 | 8.15e-33 | 117 |
| MS.gene051064.t1 | AT1G71000 | 42.593 | 162 | 79 | 5 | 4 | 159 | 2 | 155 | 4.24e-28 | 105 |
| MS.gene051064.t1 | AT1G56300 | 51.818 | 110 | 47 | 3 | 1 | 106 | 1 | 108 | 8.12e-28 | 102 |
| MS.gene051064.t1 | AT1G72416 | 73.469 | 49 | 13 | 0 | 61 | 109 | 10 | 58 | 9.56e-19 | 80.5 |
| MS.gene051064.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 3.54e-15 | 72.8 |
| MS.gene051064.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 6.99e-15 | 72.4 |
| MS.gene051064.t1 | AT1G59725 | 46.377 | 69 | 33 | 1 | 10 | 78 | 4 | 68 | 9.24e-15 | 72.8 |
| MS.gene051064.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 1.01e-14 | 72.4 |
| MS.gene051064.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 2.05e-14 | 70.5 |
| MS.gene051064.t1 | AT5G49060 | 46.914 | 81 | 35 | 3 | 7 | 86 | 96 | 169 | 2.41e-14 | 71.6 |
| MS.gene051064.t1 | AT5G49060 | 46.914 | 81 | 35 | 3 | 7 | 86 | 96 | 169 | 2.41e-14 | 71.6 |
| MS.gene051064.t1 | AT5G03160 | 46.667 | 75 | 35 | 1 | 6 | 80 | 366 | 435 | 3.92e-14 | 71.2 |
| MS.gene051064.t1 | AT5G25530 | 44.928 | 69 | 33 | 1 | 10 | 78 | 4 | 67 | 4.96e-14 | 70.5 |
| MS.gene051064.t1 | AT4G28480 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 6.72e-14 | 69.7 |
| MS.gene051064.t1 | AT3G08910 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 8.97e-14 | 69.7 |
| MS.gene051064.t1 | AT4G28480 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 1.23e-13 | 69.7 |
| MS.gene051064.t1 | AT3G47940 | 42.857 | 70 | 36 | 1 | 10 | 79 | 4 | 69 | 1.93e-13 | 68.9 |
| MS.gene051064.t1 | AT2G35720 | 42.308 | 78 | 42 | 1 | 2 | 79 | 7 | 81 | 2.07e-13 | 69.3 |
| MS.gene051064.t1 | AT1G10350 | 42.029 | 69 | 35 | 1 | 10 | 78 | 4 | 67 | 3.04e-13 | 68.6 |
| MS.gene051064.t1 | AT5G16650 | 39.024 | 82 | 43 | 2 | 3 | 83 | 4 | 79 | 6.05e-13 | 64.3 |
| MS.gene051064.t1 | AT2G20560 | 44.928 | 69 | 33 | 1 | 10 | 78 | 4 | 67 | 7.09e-13 | 67.4 |
| MS.gene051064.t1 | AT5G16650 | 39.024 | 82 | 43 | 2 | 3 | 83 | 4 | 79 | 2.31e-12 | 63.5 |
| MS.gene051064.t1 | AT2G33735 | 50.704 | 71 | 25 | 2 | 10 | 78 | 22 | 84 | 2.83e-12 | 62.0 |
| MS.gene051064.t1 | AT2G33735 | 50.704 | 71 | 25 | 2 | 10 | 78 | 22 | 84 | 2.83e-12 | 62.0 |
| MS.gene051064.t1 | AT3G12170 | 38.793 | 116 | 61 | 4 | 1 | 113 | 1 | 109 | 3.34e-12 | 64.7 |
| MS.gene051064.t1 | AT3G12170 | 37.931 | 116 | 62 | 4 | 1 | 113 | 37 | 145 | 7.17e-12 | 64.3 |
| MS.gene051064.t1 | AT5G06910 | 37.705 | 122 | 59 | 5 | 1 | 116 | 19 | 129 | 9.77e-12 | 63.5 |
| MS.gene051064.t1 | AT5G25530 | 41.558 | 77 | 32 | 3 | 10 | 78 | 4 | 75 | 1.86e-11 | 63.2 |
| MS.gene051064.t1 | AT4G39960 | 39.785 | 93 | 43 | 3 | 9 | 97 | 84 | 167 | 2.83e-11 | 62.8 |
| MS.gene051064.t1 | AT4G39960 | 39.785 | 93 | 43 | 3 | 9 | 97 | 84 | 167 | 2.83e-11 | 62.8 |
| MS.gene051064.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 4.49e-11 | 62.4 |
| MS.gene051064.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 5.64e-11 | 62.0 |
| MS.gene051064.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 5.64e-11 | 62.0 |
| MS.gene051064.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 5.64e-11 | 62.0 |
| MS.gene051064.t1 | AT3G62600 | 48.529 | 68 | 29 | 2 | 11 | 78 | 27 | 88 | 7.97e-11 | 61.2 |
Find 44 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAGAAGTTCTGGTAATT+TGG | 0.142853 | 8.3:-69477097 | None:intergenic |
| AATTCTACTCAGATGAATTA+TGG | 0.200136 | 8.3:+69477046 | MS.gene051064:CDS |
| GAAGATGTGGAGAAGGAAAA+AGG | 0.260664 | 8.3:+69477996 | MS.gene051064:CDS |
| CCTTCTCCACATCTTCTTGA+AGG | 0.267807 | 8.3:-69477989 | None:intergenic |
| CAATGATTTCTATGCAGTTT+TGG | 0.279803 | 8.3:+69474482 | MS.gene051064:CDS |
| CCAGATCGTTGTTCAGCTTC+AGG | 0.283002 | 8.3:+69474826 | MS.gene051064:CDS |
| AATTACCAGAACTTCTGTTT+TGG | 0.283009 | 8.3:+69477100 | MS.gene051064:CDS |
| GGCTCACATTTGATTTAGTT+TGG | 0.297419 | 8.3:-69476204 | None:intergenic |
| CAAGCGGATATCGGATTAAA+TGG | 0.298600 | 8.3:+69476941 | MS.gene051064:CDS |
| GCAGAGGATTCTTCTAGTTT+TGG | 0.305479 | 8.3:+69477073 | MS.gene051064:CDS |
| AGCACCTCTCTTAATGCTTC+GGG | 0.329574 | 8.3:+69476965 | MS.gene051064:CDS |
| TTATATGTGATACAGGAAAA+TGG | 0.333099 | 8.3:+69476872 | MS.gene051064:intron |
| GCAATTCAAGAAGCCTATTC+TGG | 0.348966 | 8.3:+69474889 | MS.gene051064:CDS |
| AGAAGCTAAGAAGAAATTTC+AGG | 0.357982 | 8.3:+69474867 | MS.gene051064:CDS |
| TCATCTACTTTCATGACTTT+CGG | 0.362653 | 8.3:+69476998 | MS.gene051064:CDS |
| AAGCACCTCTCTTAATGCTT+CGG | 0.391365 | 8.3:+69476964 | MS.gene051064:CDS |
| GATATGTTTCAAGCGGATAT+CGG | 0.410739 | 8.3:+69476932 | MS.gene051064:CDS |
| ATTCTACTCAGATGAATTAT+GGG | 0.423184 | 8.3:+69477047 | MS.gene051064:CDS |
| TGACCCCAAAACAGAAGTTC+TGG | 0.428777 | 8.3:-69477105 | None:intergenic |
| CAGATCGTTGTTCAGCTTCA+GGG | 0.447334 | 8.3:+69474827 | MS.gene051064:CDS |
| TGCATGTAAATTACCAGAAT+AGG | 0.452286 | 8.3:-69474902 | None:intergenic |
| AAATGGAGAGGAGAGCTTTG+AGG | 0.455188 | 8.3:+69476889 | MS.gene051064:CDS |
| CCTGAAGCTGAACAACGATC+TGG | 0.468892 | 8.3:-69474826 | None:intergenic |
| AATCCCAGGATGGTCATTAG+AGG | 0.480600 | 8.3:-69478096 | None:intergenic |
| GGGAGACTTTCTGAACGAAA+TGG | 0.482099 | 8.3:+69476168 | MS.gene051064:CDS |
| GGAAATAATATGGCTAATGA+AGG | 0.487826 | 8.3:+69474450 | None:intergenic |
| TCATGACTTTCGGTGAAAGC+GGG | 0.503824 | 8.3:+69477008 | MS.gene051064:CDS |
| AATGCTCTGATTCAGAACTA+AGG | 0.513112 | 8.3:+69474517 | MS.gene051064:CDS |
| TTCAGGGAATGTGAAGTTTG+TGG | 0.516942 | 8.3:+69474843 | MS.gene051064:CDS |
| GTTTCCTCTAATGACCATCC+TGG | 0.517095 | 8.3:+69478092 | MS.gene051064:CDS |
| TTTCCTCTAATGACCATCCT+GGG | 0.536902 | 8.3:+69478093 | MS.gene051064:CDS |
| AGTCATGAAAGTAGATGAAG+TGG | 0.538936 | 8.3:-69476993 | None:intergenic |
| TGCTTATAAGAAACTTGCAC+TGG | 0.543386 | 8.3:+69474542 | MS.gene051064:CDS |
| ATTTGATGATATGTTTCAAG+CGG | 0.571158 | 8.3:+69476925 | MS.gene051064:CDS |
| TTCATGACTTTCGGTGAAAG+CGG | 0.579461 | 8.3:+69477007 | MS.gene051064:CDS |
| CCTTCAAGAAGATGTGGAGA+AGG | 0.586502 | 8.3:+69477989 | MS.gene051064:CDS |
| GAAGCACCTTCAAGAAGATG+TGG | 0.593810 | 8.3:+69477983 | MS.gene051064:intron |
| GATGAATTATGGGAAGGCAG+AGG | 0.603296 | 8.3:+69477057 | MS.gene051064:CDS |
| TACTCAGATGAATTATGGGA+AGG | 0.609702 | 8.3:+69477051 | MS.gene051064:CDS |
| TATCAATTAGCAGAAATCCC+AGG | 0.616344 | 8.3:-69478110 | None:intergenic |
| TGTGATACAGGAAAATGGAG+AGG | 0.651222 | 8.3:+69476877 | MS.gene051064:intron |
| AAGAGATTAATGTACGACGT+TGG | 0.670458 | 8.3:+69475070 | MS.gene051064:CDS |
| AATTAGCAGAAATCCCAGGA+TGG | 0.683865 | 8.3:-69478106 | None:intergenic |
| GCAACCCGAAGCATTAAGAG+AGG | 0.689028 | 8.3:-69476969 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGCAAAAATATTAAAT+AGG | - | chr8.3:69476229-69476248 | None:intergenic | 10.0% |
| !! | TATTGCAAAAATATTAAATA+GGG | - | chr8.3:69476228-69476247 | None:intergenic | 10.0% |
| !! | TATTTAAAAAATAATTCAAG+TGG | + | chr8.3:69476565-69476584 | MS.gene051064:intron | 10.0% |
| !! | TTGATTATATGAAAAAAAAT+CGG | - | chr8.3:69475757-69475776 | None:intergenic | 10.0% |
| !!! | ATTACTTGTTTTTATATATT+GGG | + | chr8.3:69474996-69475015 | MS.gene051064:intron | 10.0% |
| !!! | TATTACTTGTTTTTATATAT+TGG | + | chr8.3:69474995-69475014 | MS.gene051064:intron | 10.0% |
| !!! | TTTATATATTTTTTGTTTAG+TGG | + | chr8.3:69476325-69476344 | MS.gene051064:intron | 10.0% |
| !! | AGGAAAATAATTTGATTAAA+TGG | + | chr8.3:69474790-69474809 | MS.gene051064:intron | 15.0% |
| !! | TGATTATATGAAAAAAAATC+GGG | - | chr8.3:69475756-69475775 | None:intergenic | 15.0% |
| !!! | AACAAGATATTATTTTATTG+TGG | + | chr8.3:69476606-69476625 | MS.gene051064:intron | 15.0% |
| !!! | CTTTAAATTATACAAGATTT+TGG | + | chr8.3:69477327-69477346 | MS.gene051064:intron | 15.0% |
| !!! | TGAATAAACTTTAGAAAAAA+CGG | - | chr8.3:69474640-69474659 | None:intergenic | 15.0% |
| !!! | TTCTCAATCTATTTTTTAAA+CGG | - | chr8.3:69475418-69475437 | None:intergenic | 15.0% |
| !! | AAAGTGAAAAGGTAAAATTA+AGG | - | chr8.3:69475245-69475264 | None:intergenic | 20.0% |
| !! | AACAAGACATAAACATTATT+AGG | - | chr8.3:69476427-69476446 | None:intergenic | 20.0% |
| !! | AATGAATTGAAAGAGTTAAA+AGG | - | chr8.3:69476824-69476843 | None:intergenic | 20.0% |
| !! | ACAAGTAATAATTTGAATCA+TGG | - | chr8.3:69474985-69475004 | None:intergenic | 20.0% |
| !! | ACCAAGAATAAAAAAAATGT+TGG | - | chr8.3:69477961-69477980 | None:intergenic | 20.0% |
| !! | ACTCTATTAATAACTCAAAA+TGG | - | chr8.3:69477802-69477821 | None:intergenic | 20.0% |
| !! | ATGAATATTGAAACTGAATT+AGG | + | chr8.3:69475298-69475317 | MS.gene051064:intron | 20.0% |
| !! | ATTCAGTTTCAATATTCATT+AGG | - | chr8.3:69475297-69475316 | None:intergenic | 20.0% |
| !! | ATTTGAAAATAATTGTTGGA+AGG | + | chr8.3:69476644-69476663 | MS.gene051064:intron | 20.0% |
| !! | CAAGATTTGAAAATAATTGT+TGG | + | chr8.3:69476640-69476659 | MS.gene051064:intron | 20.0% |
| !! | GATTAATTTATATGTGATAC+AGG | + | chr8.3:69476865-69476884 | MS.gene051064:intron | 20.0% |
| !! | TATCTTTCTTTCACAAATTT+AGG | - | chr8.3:69474720-69474739 | None:intergenic | 20.0% |
| !! | TGAATATTGAAACTGAATTA+GGG | + | chr8.3:69475299-69475318 | MS.gene051064:intron | 20.0% |
| !! | TTAACATGTAATTGAGTTAT+GGG | + | chr8.3:69477299-69477318 | MS.gene051064:intron | 20.0% |
| !! | TTATAGCACATCAAAATTAT+TGG | - | chr8.3:69476116-69476135 | None:intergenic | 20.0% |
| !! | TTTAACATGTAATTGAGTTA+TGG | + | chr8.3:69477298-69477317 | MS.gene051064:intron | 20.0% |
| !! | TTTGTATCAAATTCTCAAAT+TGG | - | chr8.3:69477831-69477850 | None:intergenic | 20.0% |
| !!! | AAAATGAATTTTGTTTTGCA+GGG | + | chr8.3:69476142-69476161 | MS.gene051064:intron | 20.0% |
| !!! | AATAATGTTTATGTCTTGTT+TGG | + | chr8.3:69476427-69476446 | MS.gene051064:intron | 20.0% |
| !!! | AATCAATTTATGAAAAGTAC+AGG | - | chr8.3:69476749-69476768 | None:intergenic | 20.0% |
| !!! | AGTTAAAAGGATTGAAATTT+TGG | - | chr8.3:69476811-69476830 | None:intergenic | 20.0% |
| !!! | ATGATAGAAGATTTAGAATT+TGG | + | chr8.3:69477360-69477379 | MS.gene051064:intron | 20.0% |
| !!! | ATGTAAATGGTGTTTTTTTT+TGG | + | chr8.3:69475025-69475044 | MS.gene051064:intron | 20.0% |
| !!! | GTTTAAAATAGTGACTTAAT+TGG | - | chr8.3:69475634-69475653 | None:intergenic | 20.0% |
| !!! | TCCAACATTTTTTTTATTCT+TGG | + | chr8.3:69477957-69477976 | MS.gene051064:intron | 20.0% |
| !!! | TGCAATTTTTTTAAGAAGAT+TGG | + | chr8.3:69477909-69477928 | MS.gene051064:intron | 20.0% |
| !!! | TGGAAATGAGTTAATTTTTT+AGG | + | chr8.3:69475518-69475537 | MS.gene051064:intron | 20.0% |
| !!! | TGTAAATGGTGTTTTTTTTT+GGG | + | chr8.3:69475026-69475045 | MS.gene051064:intron | 20.0% |
| !!! | TTTCTAAAGTTTATTCACAT+GGG | + | chr8.3:69474643-69474662 | MS.gene051064:intron | 20.0% |
| !!! | TTTGTGAAAGAAAGATATTT+TGG | + | chr8.3:69474723-69474742 | MS.gene051064:intron | 20.0% |
| !!! | TTTTCTAAAGTTTATTCACA+TGG | + | chr8.3:69474642-69474661 | MS.gene051064:intron | 20.0% |
| ! | AAAAAGAGATATGTTCTTCA+AGG | + | chr8.3:69475888-69475907 | MS.gene051064:intron | 25.0% |
| ! | AAAGTTGGAATTGTTTAGAA+AGG | + | chr8.3:69474770-69474789 | MS.gene051064:intron | 25.0% |
| ! | AACAATGATATGGTCAATTT+CGG | + | chr8.3:69475473-69475492 | MS.gene051064:intron | 25.0% |
| ! | AAGAGGAGAAGAAAAATAAT+TGG | - | chr8.3:69475860-69475879 | None:intergenic | 25.0% |
| ! | AATTCTACTCAGATGAATTA+TGG | + | chr8.3:69477046-69477065 | MS.gene051064:CDS | 25.0% |
| ! | AGAAAACAAAAAATCTCATG+TGG | + | chr8.3:69478062-69478081 | MS.gene051064:CDS | 25.0% |
| ! | AGTAGTAACAACAAAAAGAT+AGG | + | chr8.3:69477275-69477294 | MS.gene051064:intron | 25.0% |
| ! | ATTATCATTACCAATGAATG+AGG | + | chr8.3:69477655-69477674 | MS.gene051064:intron | 25.0% |
| ! | ATTCATGGAATTGAATCAAA+TGG | + | chr8.3:69476075-69476094 | MS.gene051064:intron | 25.0% |
| ! | ATTCTACTCAGATGAATTAT+GGG | + | chr8.3:69477047-69477066 | MS.gene051064:CDS | 25.0% |
| ! | CAACGAAAACAAGAAAAAAA+TGG | + | chr8.3:69475498-69475517 | MS.gene051064:intron | 25.0% |
| ! | CACTAATTAAAAGACTCATT+GGG | - | chr8.3:69477593-69477612 | None:intergenic | 25.0% |
| ! | CATAACACAAAAATAGAAGT+AGG | - | chr8.3:69475180-69475199 | None:intergenic | 25.0% |
| ! | GATTCAATTCCATGAATTAT+TGG | - | chr8.3:69476072-69476091 | None:intergenic | 25.0% |
| ! | TAACATGTAATTGAGTTATG+GGG | + | chr8.3:69477300-69477319 | MS.gene051064:intron | 25.0% |
| ! | TAATCTATCTTCAGAGTAAT+TGG | - | chr8.3:69477528-69477547 | None:intergenic | 25.0% |
| ! | TGTTTCTTCATTTACTTGAA+GGG | + | chr8.3:69475203-69475222 | MS.gene051064:intron | 25.0% |
| ! | TTAAGTGGTTAAGGAAAAAA+TGG | + | chr8.3:69477545-69477564 | MS.gene051064:intron | 25.0% |
| ! | TTACAAAACTAATAGAGTCA+GGG | + | chr8.3:69477743-69477762 | MS.gene051064:intron | 25.0% |
| ! | TTATATGTGATACAGGAAAA+TGG | + | chr8.3:69476872-69476891 | MS.gene051064:intron | 25.0% |
| ! | TTGAATGATTGTTTATTGTG+AGG | + | chr8.3:69477223-69477242 | MS.gene051064:intron | 25.0% |
| ! | TTGTTAATGTGAAAGTGAAA+AGG | - | chr8.3:69475256-69475275 | None:intergenic | 25.0% |
| ! | TTTGATTAAATGGACAGAAA+TGG | + | chr8.3:69474800-69474819 | MS.gene051064:intron | 25.0% |
| !! | AATGATTTCTATGCAGTTTT+GGG | + | chr8.3:69474483-69474502 | MS.gene051064:CDS | 25.0% |
| !! | ATAAACTTTAGAAAAAACGG+TGG | - | chr8.3:69474637-69474656 | None:intergenic | 25.0% |
| !! | ATTGTTGTTATGATGAAAGT+TGG | + | chr8.3:69474755-69474774 | MS.gene051064:intron | 25.0% |
| !! | ATTTGATGATATGTTTCAAG+CGG | + | chr8.3:69476925-69476944 | MS.gene051064:CDS | 25.0% |
| !! | CACTTTCACATTAACAATTT+TGG | + | chr8.3:69475259-69475278 | MS.gene051064:intron | 25.0% |
| !! | TATAAGGATGATTTGATAGT+TGG | + | chr8.3:69475323-69475342 | MS.gene051064:intron | 25.0% |
| !! | TATTGGGTCTAAAATGTAAA+TGG | + | chr8.3:69475012-69475031 | MS.gene051064:intron | 25.0% |
| !! | TTGTTTCTTCATTTACTTGA+AGG | + | chr8.3:69475202-69475221 | MS.gene051064:intron | 25.0% |
| !!! | ACATTTTTTTTTTCCTCCTT+TGG | - | chr8.3:69475951-69475970 | None:intergenic | 25.0% |
| !!! | AGTCACTATTTTAAACCTAA+AGG | + | chr8.3:69475638-69475657 | MS.gene051064:intron | 25.0% |
| !!! | CATTTTTTTTTTCCTCCTTT+GGG | - | chr8.3:69475950-69475969 | None:intergenic | 25.0% |
| !!! | GAAAATGAATTTTGTTTTGC+AGG | + | chr8.3:69476141-69476160 | MS.gene051064:intron | 25.0% |
| !!! | TTTTGTTGTTCATGTTATCA+AGG | + | chr8.3:69477620-69477639 | MS.gene051064:intron | 25.0% |
| !!! | TTTTGTTTGCTTGTAATTAG+TGG | + | chr8.3:69476256-69476275 | MS.gene051064:intron | 25.0% |
| AAAGACAGAGAGTAATTTGA+TGG | + | chr8.3:69477848-69477867 | MS.gene051064:intron | 30.0% | |
| AGAAGCTAAGAAGAAATTTC+AGG | + | chr8.3:69474867-69474886 | MS.gene051064:CDS | 30.0% | |
| ATAACAATTCATGCTTCAGA+TGG | - | chr8.3:69477487-69477506 | None:intergenic | 30.0% | |
| ATAATTTGAATCATGGCTCA+TGG | - | chr8.3:69474978-69474997 | None:intergenic | 30.0% | |
| ATATGTTCTTCAAGGTTAGT+AGG | + | chr8.3:69475896-69475915 | MS.gene051064:intron | 30.0% | |
| ATGAATGTTGCATCAAATGA+AGG | - | chr8.3:69477161-69477180 | None:intergenic | 30.0% | |
| CAATAAGAGCCAATAATTCA+TGG | + | chr8.3:69476060-69476079 | MS.gene051064:intron | 30.0% | |
| CACTCCATATATTATATAGC+TGG | + | chr8.3:69477873-69477892 | MS.gene051064:intron | 30.0% | |
| CCACTAATTAAAAGACTCAT+TGG | - | chr8.3:69477594-69477613 | None:intergenic | 30.0% | |
| CTTACAAAACTAATAGAGTC+AGG | + | chr8.3:69477742-69477761 | MS.gene051064:intron | 30.0% | |
| GAAACTGAATTAGGGATATA+AGG | + | chr8.3:69475307-69475326 | MS.gene051064:intron | 30.0% | |
| GAAGATAGATTAAGTGGTTA+AGG | + | chr8.3:69477536-69477555 | MS.gene051064:intron | 30.0% | |
| GAGACCAGCTATATAATATA+TGG | - | chr8.3:69477880-69477899 | None:intergenic | 30.0% | |
| GGAGAAGAAAAATAATTGGA+CGG | - | chr8.3:69475856-69475875 | None:intergenic | 30.0% | |
| GTTTCAATATTCATTAGGCA+TGG | - | chr8.3:69475292-69475311 | None:intergenic | 30.0% | |
| TAATTGTTGGAAGGATAAAG+TGG | + | chr8.3:69476653-69476672 | MS.gene051064:intron | 30.0% | |
| TAATTTGAATCATGGCTCAT+GGG | - | chr8.3:69474977-69474996 | None:intergenic | 30.0% | |
| TCATCTACTTTCATGACTTT+CGG | + | chr8.3:69476998-69477017 | MS.gene051064:CDS | 30.0% | |
| TGAATGAGGATACAAAACAA+TGG | + | chr8.3:69477669-69477688 | MS.gene051064:intron | 30.0% | |
| TGCATGTAAATTACCAGAAT+AGG | - | chr8.3:69474905-69474924 | None:intergenic | 30.0% | |
| TTCATTTGATGCAACATTCA+TGG | + | chr8.3:69477160-69477179 | MS.gene051064:intron | 30.0% | |
| TTTGGGAAAAGACATTTGTT+GGG | - | chr8.3:69475933-69475952 | None:intergenic | 30.0% | |
| ! | AAACAGAAGTTCTGGTAATT+TGG | - | chr8.3:69477100-69477119 | None:intergenic | 30.0% |
| ! | AATTACCAGAACTTCTGTTT+TGG | + | chr8.3:69477100-69477119 | MS.gene051064:CDS | 30.0% |
| ! | ATTACCAGAACTTCTGTTTT+GGG | + | chr8.3:69477101-69477120 | MS.gene051064:CDS | 30.0% |
| ! | CAATGATTTCTATGCAGTTT+TGG | + | chr8.3:69474482-69474501 | MS.gene051064:CDS | 30.0% |
| ! | TACTCTGAAGATAGATTAAG+TGG | + | chr8.3:69477530-69477549 | MS.gene051064:intron | 30.0% |
| ! | TGTTTTGTATCCTCATTCAT+TGG | - | chr8.3:69477668-69477687 | None:intergenic | 30.0% |
| !! | CCAATGAGTCTTTTAATTAG+TGG | + | chr8.3:69477591-69477610 | MS.gene051064:intron | 30.0% |
| !!! | AATTTTGTTTTGCAGGGTAT+GGG | + | chr8.3:69476148-69476167 | MS.gene051064:intron | 30.0% |
| !!! | CTGACTCTATTAGTTTTGTA+AGG | - | chr8.3:69477744-69477763 | None:intergenic | 30.0% |
| AAGAGATTAATGTACGACGT+TGG | + | chr8.3:69475070-69475089 | MS.gene051064:CDS | 35.0% | |
| AAGATGTGGAGAAGGAAAAA+GGG | + | chr8.3:69477997-69478016 | MS.gene051064:CDS | 35.0% | |
| AATGCTCTGATTCAGAACTA+AGG | + | chr8.3:69474517-69474536 | MS.gene051064:CDS | 35.0% | |
| AATTAGTGGAACGTTAGGTT+AGG | + | chr8.3:69476270-69476289 | MS.gene051064:intron | 35.0% | |
| ACAAAACAATGGAGTATGTG+TGG | + | chr8.3:69477680-69477699 | MS.gene051064:intron | 35.0% | |
| ACACCAACTATCATAGCAAT+TGG | - | chr8.3:69476454-69476473 | None:intergenic | 35.0% | |
| AGGCACAACTACATAGTATT+AGG | - | chr8.3:69476383-69476402 | None:intergenic | 35.0% | |
| AGTCATGAAAGTAGATGAAG+TGG | - | chr8.3:69476996-69477015 | None:intergenic | 35.0% | |
| ATGTGTGGAGTATATAGAAG+TGG | + | chr8.3:69477695-69477714 | MS.gene051064:intron | 35.0% | |
| ATTTCACACCATTCATGAGT+TGG | + | chr8.3:69475132-69475151 | MS.gene051064:intron | 35.0% | |
| CATGGAATTGAATCAAATGG+AGG | + | chr8.3:69476078-69476097 | MS.gene051064:intron | 35.0% | |
| CTTGTAATTAGTGGAACGTT+AGG | + | chr8.3:69476265-69476284 | MS.gene051064:intron | 35.0% | |
| GATATGTTTCAAGCGGATAT+CGG | + | chr8.3:69476932-69476951 | MS.gene051064:CDS | 35.0% | |
| GGCAAACATATAGCATAGTA+AGG | + | chr8.3:69477181-69477200 | MS.gene051064:intron | 35.0% | |
| GGTAGCAAAAAACAAGGAAA+TGG | + | chr8.3:69478038-69478057 | MS.gene051064:CDS | 35.0% | |
| GGTTAGAGTAGAAACAAAGA+CGG | - | chr8.3:69474609-69474628 | None:intergenic | 35.0% | |
| TACTCAGATGAATTATGGGA+AGG | + | chr8.3:69477051-69477070 | MS.gene051064:CDS | 35.0% | |
| TATCTTCAGAGTAATTGGCA+AGG | - | chr8.3:69477523-69477542 | None:intergenic | 35.0% | |
| TATGTGTCACATAACACATG+TGG | + | chr8.3:69476012-69476031 | MS.gene051064:intron | 35.0% | |
| TCACTGTCTTCTTTACCTTT+AGG | - | chr8.3:69475656-69475675 | None:intergenic | 35.0% | |
| TGAGAATGAATTTCCTCTCT+TGG | + | chr8.3:69475432-69475451 | MS.gene051064:intron | 35.0% | |
| TGCTTATAAGAAACTTGCAC+TGG | + | chr8.3:69474542-69474561 | MS.gene051064:CDS | 35.0% | |
| TGTTACTACTTACTACCCAT+AGG | - | chr8.3:69477265-69477284 | None:intergenic | 35.0% | |
| TTAAAGATCAGAGTGATGAG+CGG | + | chr8.3:69475354-69475373 | MS.gene051064:intron | 35.0% | |
| TTGACCATATCATTGTTTCG+TGG | - | chr8.3:69475470-69475489 | None:intergenic | 35.0% | |
| TTGTCAAACGTTTCTCAGAT+TGG | - | chr8.3:69477770-69477789 | None:intergenic | 35.0% | |
| TTTCACACCATTCATGAGTT+GGG | + | chr8.3:69475133-69475152 | MS.gene051064:intron | 35.0% | |
| ! | AACTTTAGAAAAAACGGTGG+AGG | - | chr8.3:69474634-69474653 | None:intergenic | 35.0% |
| ! | AAGGATGATTTGATAGTTGG+TGG | + | chr8.3:69475326-69475345 | MS.gene051064:intron | 35.0% |
| ! | AATTGCTATGATAGTTGGTG+TGG | + | chr8.3:69476453-69476472 | MS.gene051064:intron | 35.0% |
| ! | ACTTTAGAAAAAACGGTGGA+GGG | - | chr8.3:69474633-69474652 | None:intergenic | 35.0% |
| ! | AGGATGATTTGATAGTTGGT+GGG | + | chr8.3:69475327-69475346 | MS.gene051064:intron | 35.0% |
| ! | AGTTGTGCCTTTTTACCTTT+TGG | + | chr8.3:69476393-69476412 | MS.gene051064:intron | 35.0% |
| ! | CAACAAATGTCTTTTCCCAA+AGG | + | chr8.3:69475932-69475951 | MS.gene051064:intron | 35.0% |
| ! | CTTTGGGAAAAGACATTTGT+TGG | - | chr8.3:69475934-69475953 | None:intergenic | 35.0% |
| ! | GGCTCACATTTGATTTAGTT+TGG | - | chr8.3:69476207-69476226 | None:intergenic | 35.0% |
| ! | GTTGTGCCTTTTTACCTTTT+GGG | + | chr8.3:69476394-69476413 | MS.gene051064:intron | 35.0% |
| ! | TTACCAGAACTTCTGTTTTG+GGG | + | chr8.3:69477102-69477121 | MS.gene051064:CDS | 35.0% |
| ! | TTGGGAAAAGACATTTGTTG+GGG | - | chr8.3:69475932-69475951 | None:intergenic | 35.0% |
| !! | AGTTTTGTAAGGAGATCACT+AGG | - | chr8.3:69477733-69477752 | None:intergenic | 35.0% |
| !!! | CCTTTTTACCTTTTGGGATT+GGG | + | chr8.3:69476400-69476419 | MS.gene051064:intron | 35.0% |
| !!! | GAATTTTGTTTTGCAGGGTA+TGG | + | chr8.3:69476147-69476166 | MS.gene051064:intron | 35.0% |
| !!! | TCTCTTTTTTCACGTGAAAG+AGG | - | chr8.3:69475877-69475896 | None:intergenic | 35.0% |
| !!! | TGCAGTTTTGGGATTGAATA+AGG | + | chr8.3:69474494-69474513 | MS.gene051064:CDS | 35.0% |
| AAGCACCTCTCTTAATGCTT+CGG | + | chr8.3:69476964-69476983 | MS.gene051064:CDS | 40.0% | |
| AATTAGCAGAAATCCCAGGA+TGG | - | chr8.3:69478109-69478128 | None:intergenic | 40.0% | |
| AGATGTGGAGAAGGAAAAAG+GGG | + | chr8.3:69477998-69478017 | MS.gene051064:CDS | 40.0% | |
| AGGCAAGTGAAAGAGAAAGA+GGG | - | chr8.3:69475160-69475179 | None:intergenic | 40.0% | |
| ATAAAGTGGTTTACTGGACC+GGG | + | chr8.3:69476667-69476686 | MS.gene051064:intron | 40.0% | |
| CAAGCGGATATCGGATTAAA+TGG | + | chr8.3:69476941-69476960 | MS.gene051064:CDS | 40.0% | |
| CCCAATCCCAAAAGGTAAAA+AGG | - | chr8.3:69476403-69476422 | None:intergenic | 40.0% | |
| CCTTTACTTGTTTGGCCTAT+GGG | + | chr8.3:69477247-69477266 | MS.gene051064:intron | 40.0% | |
| GAAAAAGGGGGAATTCTAGA+AGG | + | chr8.3:69478011-69478030 | MS.gene051064:CDS | 40.0% | |
| GAAGATGTGGAGAAGGAAAA+AGG | + | chr8.3:69477996-69478015 | MS.gene051064:CDS | 40.0% | |
| GAAGCAAATATGACCAAGAG+AGG | - | chr8.3:69475448-69475467 | None:intergenic | 40.0% | |
| GATAAAGTGGTTTACTGGAC+CGG | + | chr8.3:69476666-69476685 | MS.gene051064:intron | 40.0% | |
| GATGCAACTATTGTAGTCGT+TGG | + | chr8.3:69477404-69477423 | MS.gene051064:intron | 40.0% | |
| GCAATTCAAGAAGCCTATTC+TGG | + | chr8.3:69474889-69474908 | MS.gene051064:CDS | 40.0% | |
| GCTTCCACGAAACAATGATA+TGG | + | chr8.3:69475463-69475482 | MS.gene051064:intron | 40.0% | |
| GGAAGGATAAAGTGGTTTAC+TGG | + | chr8.3:69476661-69476680 | MS.gene051064:intron | 40.0% | |
| GGTCCAATTGCTATGATAGT+TGG | + | chr8.3:69476448-69476467 | MS.gene051064:intron | 40.0% | |
| TAAAGATCAGAGTGATGAGC+GGG | + | chr8.3:69475355-69475374 | MS.gene051064:intron | 40.0% | |
| TAGGCAAGTGAAAGAGAAAG+AGG | - | chr8.3:69475161-69475180 | None:intergenic | 40.0% | |
| TATTAGGACCCAATCCCAAA+AGG | - | chr8.3:69476411-69476430 | None:intergenic | 40.0% | |
| TCCTTTACTTGTTTGGCCTA+TGG | + | chr8.3:69477246-69477265 | MS.gene051064:intron | 40.0% | |
| TGCAACGAATGCACATTTGT+TGG | - | chr8.3:69477441-69477460 | None:intergenic | 40.0% | |
| TGTGAGGTCCTTTACTTGTT+TGG | + | chr8.3:69477239-69477258 | MS.gene051064:intron | 40.0% | |
| TGTGATACAGGAAAATGGAG+AGG | + | chr8.3:69476877-69476896 | MS.gene051064:intron | 40.0% | |
| TTCAGGGAATGTGAAGTTTG+TGG | + | chr8.3:69474843-69474862 | MS.gene051064:CDS | 40.0% | |
| TTCATGACTTTCGGTGAAAG+CGG | + | chr8.3:69477007-69477026 | MS.gene051064:CDS | 40.0% | |
| TTTCCTCTAATGACCATCCT+GGG | + | chr8.3:69478093-69478112 | MS.gene051064:CDS | 40.0% | |
| ! | AATGCACATTTGTTGGATCC+TGG | - | chr8.3:69477434-69477453 | None:intergenic | 40.0% |
| ! | CAAATGTCTTTTCCCAAAGG+AGG | + | chr8.3:69475935-69475954 | MS.gene051064:intron | 40.0% |
| ! | GGATGATTTGATAGTTGGTG+GGG | + | chr8.3:69475328-69475347 | MS.gene051064:intron | 40.0% |
| !!! | GCAGAGGATTCTTCTAGTTT+TGG | + | chr8.3:69477073-69477092 | MS.gene051064:CDS | 40.0% |
| !!! | GCCTTTTTACCTTTTGGGAT+TGG | + | chr8.3:69476399-69476418 | MS.gene051064:intron | 40.0% |
| AAATGGAGAGGAGAGCTTTG+AGG | + | chr8.3:69476889-69476908 | MS.gene051064:CDS | 45.0% | |
| AATCCCAGGATGGTCATTAG+AGG | - | chr8.3:69478099-69478118 | None:intergenic | 45.0% | |
| AGCACCTCTCTTAATGCTTC+GGG | + | chr8.3:69476965-69476984 | MS.gene051064:CDS | 45.0% | |
| CAGATCGTTGTTCAGCTTCA+GGG | + | chr8.3:69474827-69474846 | MS.gene051064:CDS | 45.0% | |
| CCCATAGGCCAAACAAGTAA+AGG | - | chr8.3:69477250-69477269 | None:intergenic | 45.0% | |
| CCTTCAAGAAGATGTGGAGA+AGG | + | chr8.3:69477989-69478008 | MS.gene051064:CDS | 45.0% | |
| CCTTCTCCACATCTTCTTGA+AGG | - | chr8.3:69477992-69478011 | None:intergenic | 45.0% | |
| GATGAATTATGGGAAGGCAG+AGG | + | chr8.3:69477057-69477076 | MS.gene051064:CDS | 45.0% | |
| GATGTGGAGAAGGAAAAAGG+GGG | + | chr8.3:69477999-69478018 | MS.gene051064:CDS | 45.0% | |
| GGAGGAGGTAGCAAAAAACA+AGG | + | chr8.3:69478032-69478051 | MS.gene051064:CDS | 45.0% | |
| GGGAGACTTTCTGAACGAAA+TGG | + | chr8.3:69476168-69476187 | MS.gene051064:CDS | 45.0% | |
| GTTTCCTCTAATGACCATCC+TGG | + | chr8.3:69478092-69478111 | MS.gene051064:CDS | 45.0% | |
| TATTGTACGAACACACAGCC+CGG | - | chr8.3:69476688-69476707 | None:intergenic | 45.0% | |
| TCACATAACACATGTGGCAG+TGG | + | chr8.3:69476018-69476037 | MS.gene051064:intron | 45.0% | |
| TCATGACTTTCGGTGAAAGC+GGG | + | chr8.3:69477008-69477027 | MS.gene051064:CDS | 45.0% | |
| TGACCCCAAAACAGAAGTTC+TGG | - | chr8.3:69477108-69477127 | None:intergenic | 45.0% | |
| TTAGAAAAAACGGTGGAGGG+TGG | - | chr8.3:69474630-69474649 | None:intergenic | 45.0% | |
| ! | AAAGGGGGAATTCTAGAAGG+AGG | + | chr8.3:69478014-69478033 | MS.gene051064:CDS | 45.0% |
| ! | CTATGATAGTTGGTGTGGTG+GGG | + | chr8.3:69476458-69476477 | MS.gene051064:intron | 45.0% |
| ! | GAAGCACCTTCAAGAAGATG+TGG | + | chr8.3:69477983-69478002 | MS.gene051064:intron | 45.0% |
| ! | GCTATGATAGTTGGTGTGGT+GGG | + | chr8.3:69476457-69476476 | MS.gene051064:intron | 45.0% |
| ! | TATGATAGTTGGTGTGGTGG+GGG | + | chr8.3:69476459-69476478 | MS.gene051064:intron | 45.0% |
| ! | TGCTATGATAGTTGGTGTGG+TGG | + | chr8.3:69476456-69476475 | MS.gene051064:intron | 45.0% |
| ! | TGTGGTGGGGGTATATTGTT+GGG | + | chr8.3:69476471-69476490 | MS.gene051064:intron | 45.0% |
| !!! | AAATTATATATTTTTTTTCA+TGG | + | chr8.3:69474674-69474693 | MS.gene051064:intron | 5.0% |
| AGAGGGTCCCAACTCATGAA+TGG | - | chr8.3:69475143-69475162 | None:intergenic | 50.0% | |
| ATCCTCGACAACAGCAACAC+TGG | - | chr8.3:69477464-69477483 | None:intergenic | 50.0% | |
| ATTGTAGTCGTTGGATCGCC+AGG | + | chr8.3:69477413-69477432 | MS.gene051064:intron | 50.0% | |
| CCAGATCGTTGTTCAGCTTC+AGG | + | chr8.3:69474826-69474845 | MS.gene051064:CDS | 50.0% | |
| CCTGAAGCTGAACAACGATC+TGG | - | chr8.3:69474829-69474848 | None:intergenic | 50.0% | |
| ! | GCAACCCGAAGCATTAAGAG+AGG | - | chr8.3:69476972-69476991 | None:intergenic | 50.0% |
| ! | GTGGTGGGGGTATATTGTTG+GGG | + | chr8.3:69476472-69476491 | MS.gene051064:intron | 50.0% |
| ! | GTGTGGTGGGGGTATATTGT+TGG | + | chr8.3:69476470-69476489 | MS.gene051064:intron | 50.0% |
| ! | CACCAGTGTTGCTGTTGTCG+AGG | + | chr8.3:69477459-69477478 | MS.gene051064:intron | 55.0% |
| ! | GGGGGAATTCTAGAAGGAGG+AGG | + | chr8.3:69478017-69478036 | MS.gene051064:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 69474459 | 69478130 | 69474459 | ID=MS.gene051064 |
| chr8.3 | mRNA | 69474459 | 69478130 | 69474459 | ID=MS.gene051064.t1;Parent=MS.gene051064 |
| chr8.3 | exon | 69474459 | 69474563 | 69474459 | ID=MS.gene051064.t1.exon1;Parent=MS.gene051064.t1 |
| chr8.3 | CDS | 69474459 | 69474563 | 69474459 | ID=cds.MS.gene051064.t1;Parent=MS.gene051064.t1 |
| chr8.3 | exon | 69474817 | 69474910 | 69474817 | ID=MS.gene051064.t1.exon2;Parent=MS.gene051064.t1 |
| chr8.3 | CDS | 69474817 | 69474910 | 69474817 | ID=cds.MS.gene051064.t1;Parent=MS.gene051064.t1 |
| chr8.3 | exon | 69475053 | 69475120 | 69475053 | ID=MS.gene051064.t1.exon3;Parent=MS.gene051064.t1 |
| chr8.3 | CDS | 69475053 | 69475120 | 69475053 | ID=cds.MS.gene051064.t1;Parent=MS.gene051064.t1 |
| chr8.3 | exon | 69476163 | 69476219 | 69476163 | ID=MS.gene051064.t1.exon4;Parent=MS.gene051064.t1 |
| chr8.3 | CDS | 69476163 | 69476219 | 69476163 | ID=cds.MS.gene051064.t1;Parent=MS.gene051064.t1 |
| chr8.3 | exon | 69476887 | 69477123 | 69476887 | ID=MS.gene051064.t1.exon5;Parent=MS.gene051064.t1 |
| chr8.3 | CDS | 69476887 | 69477123 | 69476887 | ID=cds.MS.gene051064.t1;Parent=MS.gene051064.t1 |
| chr8.3 | exon | 69477987 | 69478130 | 69477987 | ID=MS.gene051064.t1.exon6;Parent=MS.gene051064.t1 |
| chr8.3 | CDS | 69477987 | 69478130 | 69477987 | ID=cds.MS.gene051064.t1;Parent=MS.gene051064.t1 |
| Gene Sequence |
| Protein sequence |
