Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44019.t1 | XP_003591015.2 | 97.2 | 579 | 16 | 0 | 1 | 579 | 1 | 579 | 0.00E+00 | 1151.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44019.t1 | Q9SMJ3 | 84.8 | 579 | 81 | 4 | 8 | 579 | 10 | 588 | 1.6e-289 | 996.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44019.t1 | G7I6X1 | 97.2 | 579 | 16 | 0 | 1 | 579 | 1 | 579 | 0.0e+00 | 1151.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050747 | MS.gene44019 | 0.821884 | 3.18E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene44019 | 0.824821 | 6.56E-54 | -1.69E-46 |
| MS.gene053626 | MS.gene44019 | 0.813676 | 2.27E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene44019 | 0.827666 | 1.38E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene44019 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene44019 | 0.822249 | 2.62E-53 | -1.69E-46 |
| MS.gene058090 | MS.gene44019 | 0.806008 | 1.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44019 | MS.gene045317 | PPI |
| MS.gene44019 | MS.gene77565 | PPI |
| MS.gene75640 | MS.gene44019 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44019.t1 | MTR_1g081290 | 97.237 | 579 | 16 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1172 |
| MS.gene44019.t1 | MTR_1g081290 | 96.952 | 525 | 16 | 0 | 1 | 525 | 1 | 525 | 0.0 | 1065 |
| MS.gene44019.t1 | MTR_1g081290 | 96.413 | 446 | 16 | 0 | 1 | 446 | 1 | 446 | 0.0 | 900 |
| MS.gene44019.t1 | MTR_3g084830 | 31.367 | 373 | 227 | 7 | 28 | 387 | 58 | 414 | 1.42e-48 | 174 |
| MS.gene44019.t1 | MTR_3g084850 | 34.328 | 134 | 82 | 2 | 434 | 562 | 6 | 138 | 3.80e-18 | 81.6 |
| MS.gene44019.t1 | MTR_3g084850 | 34.507 | 142 | 81 | 4 | 434 | 569 | 6 | 141 | 4.16e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44019.t1 | AT3G04870 | 82.815 | 547 | 88 | 1 | 33 | 579 | 18 | 558 | 0.0 | 964 |
| MS.gene44019.t1 | AT3G04870 | 82.815 | 547 | 88 | 1 | 33 | 579 | 18 | 558 | 0.0 | 964 |
| MS.gene44019.t1 | AT3G04870 | 82.815 | 547 | 88 | 1 | 33 | 579 | 18 | 558 | 0.0 | 964 |
| MS.gene44019.t1 | AT3G04870 | 82.815 | 547 | 88 | 1 | 33 | 579 | 18 | 558 | 0.0 | 964 |
| MS.gene44019.t1 | AT4G14210 | 32.383 | 491 | 293 | 9 | 72 | 554 | 93 | 552 | 3.57e-73 | 244 |
| MS.gene44019.t1 | AT4G14210 | 32.383 | 491 | 293 | 9 | 72 | 554 | 93 | 552 | 3.57e-73 | 244 |
| MS.gene44019.t1 | AT4G14210 | 32.383 | 491 | 293 | 9 | 72 | 554 | 93 | 552 | 3.57e-73 | 244 |
Find 145 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCGGCTTCGTTGCTCTT+TGG | 0.276120 | 1.3:-57492519 | MS.gene44019:CDS |
| ATTGAGGGACATACGAAATT+TGG | 0.283127 | 1.3:-57490458 | MS.gene44019:CDS |
| CTCTGCATCCCCACCTTAGA+TGG | 0.296738 | 1.3:+57489815 | None:intergenic |
| CTTGAAATAATTTCTTCATT+TGG | 0.308702 | 1.3:+57488043 | None:intergenic |
| CCGTGTAATGGCGCCCCAAC+TGG | 0.313651 | 1.3:+57490713 | None:intergenic |
| ATCATTGGAGCTGGGCTTGC+CGG | 0.324197 | 1.3:-57491519 | MS.gene44019:CDS |
| CTCTATCTGTGATGTACTTC+CGG | 0.333710 | 1.3:+57489932 | None:intergenic |
| CGGAAGTACATCACAGATAG+AGG | 0.360487 | 1.3:-57489931 | MS.gene44019:CDS |
| GACTTCTTTAATTCATTGTC+CGG | 0.363391 | 1.3:-57492624 | MS.gene44019:CDS |
| GATCCAGTTGCCTATGCCCT+TGG | 0.363674 | 1.3:-57490084 | MS.gene44019:CDS |
| TCATTTGGCAAGGGCATGTA+TGG | 0.366332 | 1.3:+57488058 | None:intergenic |
| TGTGGCAAACAATGCAAATA+TGG | 0.366987 | 1.3:+57490020 | None:intergenic |
| CCCTCGATGTAATAGTCTTC+AGG | 0.368691 | 1.3:+57489127 | None:intergenic |
| ACGCGGAAATCACATTGAAA+TGG | 0.376818 | 1.3:-57491184 | MS.gene44019:CDS |
| GTCAACTGCGGTCGAACTCT+TGG | 0.377051 | 1.3:-57491493 | MS.gene44019:CDS |
| GCTGAAACAGGTTCCATCTA+AGG | 0.377434 | 1.3:-57489828 | MS.gene44019:intron |
| GATGGGAGCACTTATGTTAC+AGG | 0.378354 | 1.3:-57489769 | MS.gene44019:CDS |
| TTTGACCACAAATCAGCTTA+AGG | 0.381047 | 1.3:-57490678 | MS.gene44019:intron |
| TGGTCATCTGTTGTTAAAAT+CGG | 0.386009 | 1.3:-57487852 | MS.gene44019:CDS |
| AACCCAAGGGCATAGGCAAC+TGG | 0.393599 | 1.3:+57490081 | None:intergenic |
| ATCCAGTTGCCTATGCCCTT+GGG | 0.393795 | 1.3:-57490083 | MS.gene44019:CDS |
| ACTCGTGCGTGTGCCACCTT+TGG | 0.393846 | 1.3:+57490122 | None:intergenic |
| TCCGGAGGAAATAGTCCTTT+TGG | 0.394186 | 1.3:+57491579 | None:intergenic |
| TTCGGTCCTCGGTAATGTTC+CGG | 0.396061 | 1.3:+57491555 | None:intergenic |
| GCGATGTCCCTGGAATTAAA+AGG | 0.400605 | 1.3:-57489503 | MS.gene44019:CDS |
| TTCTGGCTCTTACACAAAAC+AGG | 0.401890 | 1.3:-57487751 | MS.gene44019:intron |
| ATGTCCCTCAATGCACCATC+TGG | 0.410123 | 1.3:+57490469 | None:intergenic |
| CCAGTTGGGGCGCCATTACA+CGG | 0.410647 | 1.3:-57490713 | MS.gene44019:CDS |
| ATGGAAGGTGCAACCTTATC+CGG | 0.415005 | 1.3:-57486905 | MS.gene44019:CDS |
| TATTTCAAGAGTAGCGAAAC+AGG | 0.418943 | 1.3:-57488029 | MS.gene44019:intron |
| TGAAGTTTGCCTGCCGGATA+AGG | 0.421829 | 1.3:+57486892 | None:intergenic |
| AATTACCTTAAGCTGATTTG+TGG | 0.424296 | 1.3:+57490673 | None:intergenic |
| TCAACAAGAGCTCTGACAAC+TGG | 0.426518 | 1.3:+57490493 | None:intergenic |
| CGCGGAAATCACATTGAAAT+GGG | 0.426629 | 1.3:-57491183 | MS.gene44019:CDS |
| AACCCTTCAGCATCCGCAAA+AGG | 0.426804 | 1.3:+57489983 | None:intergenic |
| TATGTATCAGACTTATGATA+AGG | 0.440470 | 1.3:-57490545 | MS.gene44019:intron |
| CCTCGGTAATGTTCCGGCTC+CGG | 0.440535 | 1.3:+57491561 | None:intergenic |
| ACTTCTAAACCTTGAGATGA+TGG | 0.448031 | 1.3:+57487879 | None:intergenic |
| AAGGGAAGCCTCAGTCTTTG+TGG | 0.449171 | 1.3:+57490002 | None:intergenic |
| AAGTTGAAAGTTGCTATCAT+TGG | 0.457099 | 1.3:-57491534 | MS.gene44019:CDS |
| TTTATTTGAGCGGCCCTATC+CGG | 0.458297 | 1.3:-57489951 | MS.gene44019:CDS |
| CTCACACCTTTGTAAACAAA+GGG | 0.458935 | 1.3:-57490913 | MS.gene44019:CDS |
| AAAGTTGCTATCATTGGAGC+TGG | 0.466717 | 1.3:-57491528 | MS.gene44019:CDS |
| CTCAAGGTTTAGAAGTGACT+TGG | 0.468098 | 1.3:-57487872 | MS.gene44019:CDS |
| AGATACATAGCCACAAGGTT+CGG | 0.475614 | 1.3:-57492535 | MS.gene44019:CDS |
| AATAATTTCTTCATTTGGCA+AGG | 0.476215 | 1.3:+57488048 | None:intergenic |
| CAACTTTCAACTTCGGTCCT+CGG | 0.476927 | 1.3:+57491544 | None:intergenic |
| ATATCAGCCTGCGATGTCCC+TGG | 0.478030 | 1.3:-57489513 | MS.gene44019:intron |
| TCAGCCTATATCTGTGATGC+GGG | 0.478524 | 1.3:-57486872 | MS.gene44019:CDS |
| CTGTGATGTACTTCCGGATA+GGG | 0.484028 | 1.3:+57489938 | None:intergenic |
| CCCATCAGAGTGGAGGGAAA+AGG | 0.490856 | 1.3:-57489475 | MS.gene44019:CDS |
| GAAGCCGATGCTTATGTTGC+TGG | 0.492399 | 1.3:-57489618 | MS.gene44019:intron |
| GGGCCGCTCAAATAAACATC+TGG | 0.494050 | 1.3:+57489958 | None:intergenic |
| GTCCCTCACGGTACAGAGAT+TGG | 0.495906 | 1.3:+57487829 | None:intergenic |
| ATCAGATGTGTTCTGACGCC+AGG | 0.501293 | 1.3:-57488085 | MS.gene44019:intron |
| ACTCGTGCTGGAGATTCTGT+TGG | 0.501847 | 1.3:-57492584 | MS.gene44019:CDS |
| AAATATGGTGAGCATGCAAC+GGG | 0.505912 | 1.3:+57490035 | None:intergenic |
| TCACTCTCTGCTACTCGTGC+TGG | 0.509176 | 1.3:-57492596 | MS.gene44019:CDS |
| GTAGCAGAGAGTGAAGTTGC+CGG | 0.509893 | 1.3:+57492605 | None:intergenic |
| AATGCATTTATCCCGTGTAA+TGG | 0.512960 | 1.3:+57490701 | None:intergenic |
| AAGGGCATGTATGGATCTCC+TGG | 0.521092 | 1.3:+57488067 | None:intergenic |
| AGGACTATTTCCTCCGGAGC+CGG | 0.521255 | 1.3:-57491574 | MS.gene44019:CDS |
| TACAGGACTTTCCTTGTCAA+AGG | 0.522929 | 1.3:-57489752 | MS.gene44019:intron |
| TGATCCAGATGGTGCATTGA+GGG | 0.528957 | 1.3:-57490473 | MS.gene44019:CDS |
| TCAGACTGGTTTATGTCCAA+AGG | 0.532179 | 1.3:-57490138 | MS.gene44019:CDS |
| TACAACTCAGATACAATGGT+TGG | 0.536420 | 1.3:-57489404 | MS.gene44019:CDS |
| ATAATTTCTTCATTTGGCAA+GGG | 0.539005 | 1.3:+57488049 | None:intergenic |
| TTCGACCGCAGTTGACATGC+CGG | 0.540533 | 1.3:+57491500 | None:intergenic |
| TCACCAGATGTTTATTTGAG+CGG | 0.541234 | 1.3:-57489961 | MS.gene44019:CDS |
| CGTGTAATGGCGCCCCAACT+GGG | 0.544542 | 1.3:+57490714 | None:intergenic |
| CTTTATGATAAATCTGCTGA+TGG | 0.545887 | 1.3:-57489787 | MS.gene44019:CDS |
| GCGGTCGAACTCTTGGATCA+AGG | 0.548779 | 1.3:-57491486 | MS.gene44019:CDS |
| GTCAATAAACCCAAGGGCAT+AGG | 0.550109 | 1.3:+57490074 | None:intergenic |
| ATTCATCTGCCAGCACCAAA+AGG | 0.551507 | 1.3:-57491594 | MS.gene44019:intron |
| GGCTACTGAGAAGAAAATTG+TGG | 0.551646 | 1.3:-57489640 | MS.gene44019:CDS |
| AGGCAACTGAAGAAAGCTAC+CGG | 0.553730 | 1.3:-57489217 | MS.gene44019:CDS |
| TCTGTGATGTACTTCCGGAT+AGG | 0.554625 | 1.3:+57489937 | None:intergenic |
| ACCCTTCAGCATCCGCAAAA+GGG | 0.561564 | 1.3:+57489984 | None:intergenic |
| ACAACTCAGATACAATGGTT+GGG | 0.563778 | 1.3:-57489403 | MS.gene44019:CDS |
| AATAACATATACAAACTCGT+TGG | 0.563830 | 1.3:-57489444 | MS.gene44019:CDS |
| ACCAAAAGGACTATTTCCTC+CGG | 0.566476 | 1.3:-57491580 | MS.gene44019:CDS |
| ATGTATCTTTGCGAAACGTG+TGG | 0.566530 | 1.3:+57492550 | None:intergenic |
| CGGTAATGTTCCGGCTCCGG+AGG | 0.566639 | 1.3:+57491564 | None:intergenic |
| ATGATAGCAACTTTCAACTT+CGG | 0.570765 | 1.3:+57491537 | None:intergenic |
| TTTAATTCCAGGGACATCGC+AGG | 0.571144 | 1.3:+57489506 | None:intergenic |
| ATAGGCTGAAGTTTGCCTGC+CGG | 0.573360 | 1.3:+57486886 | None:intergenic |
| TCGTTGTTCCCATCATCTCA+AGG | 0.573643 | 1.3:-57487888 | MS.gene44019:CDS |
| ACTCACACCTTTGTAAACAA+AGG | 0.576174 | 1.3:-57490914 | MS.gene44019:CDS |
| CAAATATGGTGAGCATGCAA+CGG | 0.576514 | 1.3:+57490034 | None:intergenic |
| GAAACAGGTTCCATCTAAGG+TGG | 0.582717 | 1.3:-57489825 | MS.gene44019:intron |
| TTGTTGGGTCTAGGTGGGTG+CGG | 0.583354 | 1.3:-57490963 | MS.gene44019:intron |
| AAGTTGCTATCATTGGAGCT+GGG | 0.583886 | 1.3:-57491527 | MS.gene44019:CDS |
| AGAATTGGTGGCATTGCGGA+AGG | 0.584021 | 1.3:-57486846 | MS.gene44019:CDS |
| CTTCTAAACCTTGAGATGAT+GGG | 0.585413 | 1.3:+57487880 | None:intergenic |
| TTCAGCCTATATCTGTGATG+CGG | 0.586370 | 1.3:-57486873 | MS.gene44019:CDS |
| CAGTTGGGGCGCCATTACAC+GGG | 0.587741 | 1.3:-57490712 | MS.gene44019:CDS |
| TGCAGAATCTAGAAATGTCA+AGG | 0.588922 | 1.3:-57489371 | MS.gene44019:intron |
| AGAGCTCTTGTTGATCCAGA+TGG | 0.589565 | 1.3:-57490484 | MS.gene44019:CDS |
| CGCAAAGATACATAGCCACA+AGG | 0.590756 | 1.3:-57492540 | MS.gene44019:CDS |
| ATAGAGAAGGTTGTCTAACC+CGG | 0.591839 | 1.3:+57489198 | None:intergenic |
| AAACAGGTTCCATCTAAGGT+GGG | 0.592718 | 1.3:-57489824 | MS.gene44019:intron |
| GGTCTAAATGGATCTTTACC+AGG | 0.593355 | 1.3:+57487807 | None:intergenic |
| GGAAGTACATCACAGATAGA+GGG | 0.594388 | 1.3:-57489930 | MS.gene44019:CDS |
| CTGAGTTGTACTGTGACCAC+AGG | 0.596745 | 1.3:+57489417 | None:intergenic |
| TTGATCCAGATGGTGCATTG+AGG | 0.597130 | 1.3:-57490474 | MS.gene44019:CDS |
| AAGGTGCAACCTTATCCGGC+AGG | 0.600316 | 1.3:-57486901 | MS.gene44019:CDS |
| TATCACAGTCAATAAACCCA+AGG | 0.605846 | 1.3:+57490067 | None:intergenic |
| GATTACATAGACAGCATGGA+AGG | 0.607021 | 1.3:-57486920 | MS.gene44019:CDS |
| GTTACTCCCATCAGAGTGGA+GGG | 0.607848 | 1.3:-57489481 | MS.gene44019:CDS |
| TCTCTGTACCGTGAGGGACC+TGG | 0.607923 | 1.3:-57487825 | MS.gene44019:CDS |
| TGTATCTTTGCGAAACGTGT+GGG | 0.608326 | 1.3:+57492551 | None:intergenic |
| GGGAAGAATTGGTGGCATTG+CGG | 0.610606 | 1.3:-57486850 | MS.gene44019:CDS |
| TTTATGATAAATCTGCTGAT+GGG | 0.613858 | 1.3:-57489786 | MS.gene44019:CDS |
| CAGCCTATATCTGTGATGCG+GGG | 0.614951 | 1.3:-57486871 | MS.gene44019:CDS |
| GACTATTACATCGAGGGACA+AGG | 0.615874 | 1.3:-57489121 | MS.gene44019:CDS |
| CCTGAAGACTATTACATCGA+GGG | 0.618138 | 1.3:-57489127 | MS.gene44019:CDS |
| AACAGGTTCCATCTAAGGTG+GGG | 0.618751 | 1.3:-57489823 | MS.gene44019:intron |
| ATCACAGTCAATAAACCCAA+GGG | 0.619021 | 1.3:+57490068 | None:intergenic |
| AGCCTATATCTGTGATGCGG+GGG | 0.619252 | 1.3:-57486870 | MS.gene44019:CDS |
| GACTGGTTTATGTCCAAAGG+TGG | 0.624860 | 1.3:-57490135 | MS.gene44019:CDS |
| CTAACCGTTGGTACTCATGT+CGG | 0.626829 | 1.3:+57492484 | None:intergenic |
| GGTTACTCCCATCAGAGTGG+AGG | 0.630867 | 1.3:-57489482 | MS.gene44019:CDS |
| TCAGGATTACATAGACAGCA+TGG | 0.632080 | 1.3:-57486924 | MS.gene44019:intron |
| TGGACTCAGTGCAAGAGCCA+CGG | 0.632585 | 1.3:+57490513 | None:intergenic |
| GTTTCCGACATGAGTACCAA+CGG | 0.632950 | 1.3:-57492488 | MS.gene44019:intron |
| CTAACCAGCAACATAAGCAT+CGG | 0.636070 | 1.3:+57489614 | None:intergenic |
| GGCCAATCTCTGTACCGTGA+GGG | 0.636229 | 1.3:-57487831 | MS.gene44019:CDS |
| GATCTTTACCAGGTCCCTCA+CGG | 0.638059 | 1.3:+57487817 | None:intergenic |
| GGCAACTGAAGAAAGCTACC+GGG | 0.645085 | 1.3:-57489216 | MS.gene44019:CDS |
| ACAGTACAACTCAGATACAA+TGG | 0.648435 | 1.3:-57489408 | MS.gene44019:CDS |
| ACTCTTGGATCAAGGACATG+AGG | 0.652064 | 1.3:-57491478 | MS.gene44019:intron |
| ATTGTTTGCCACAAAGACTG+AGG | 0.652436 | 1.3:-57490010 | MS.gene44019:CDS |
| CAAACTCGTTGGAGTTCCTG+TGG | 0.658132 | 1.3:-57489433 | MS.gene44019:CDS |
| TGATAAGGCTAGAAATGCCG+TGG | 0.660155 | 1.3:-57490530 | MS.gene44019:CDS |
| GAAGTACATCACAGATAGAG+GGG | 0.664359 | 1.3:-57489929 | MS.gene44019:CDS |
| AGCAACGAAGCCGAACCTTG+TGG | 0.668845 | 1.3:+57492525 | None:intergenic |
| GCTTGCCGGCATGTCAACTG+CGG | 0.671734 | 1.3:-57491505 | MS.gene44019:CDS |
| CGGCCAATCTCTGTACCGTG+AGG | 0.680928 | 1.3:-57487832 | MS.gene44019:CDS |
| AAAGGTTACTCCCATCAGAG+TGG | 0.682957 | 1.3:-57489485 | MS.gene44019:CDS |
| TCCTGAAGACTATTACATCG+AGG | 0.684522 | 1.3:-57489128 | MS.gene44019:CDS |
| AAAGTATATCACCTTTGACA+AGG | 0.686346 | 1.3:+57489741 | None:intergenic |
| CACACCTTTGTAAACAAAGG+GGG | 0.694534 | 1.3:-57490911 | MS.gene44019:CDS |
| AAGTACATCACAGATAGAGG+GGG | 0.702330 | 1.3:-57489928 | MS.gene44019:CDS |
| TCACACCTTTGTAAACAAAG+GGG | 0.705760 | 1.3:-57490912 | MS.gene44019:CDS |
| CCGGAGCCGGAACATTACCG+AGG | 0.735072 | 1.3:-57491561 | MS.gene44019:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATCATTAAAAGAATAA+CGG | + | chr1.3:57491426-57491445 | None:intergenic | 10.0% |
| !!! | ATTGTAATTGTATTTATTTT+TGG | + | chr1.3:57487337-57487356 | None:intergenic | 10.0% |
| !! | AAATAAAATAACAAACTTAG+AGG | + | chr1.3:57491297-57491316 | None:intergenic | 15.0% |
| !! | AAATAGAATGAAATAATCAT+TGG | + | chr1.3:57490653-57490672 | None:intergenic | 15.0% |
| !! | AAGAAAAATTAATCCAATTA+TGG | + | chr1.3:57488420-57488439 | None:intergenic | 15.0% |
| !! | AATAAAATAACAAACTTAGA+GGG | + | chr1.3:57491296-57491315 | None:intergenic | 15.0% |
| !! | AATAATCAGGAAAATTTATT+TGG | + | chr1.3:57489008-57489027 | None:intergenic | 15.0% |
| !! | AATATTATATGAACATATGT+TGG | + | chr1.3:57491260-57491279 | None:intergenic | 15.0% |
| !! | AATTACACAATAATGATAAA+AGG | + | chr1.3:57490141-57490160 | None:intergenic | 15.0% |
| !! | CATATGAAAAAAAAAATACA+AGG | - | chr1.3:57492108-57492127 | MS.gene44019:intron | 15.0% |
| !! | GACATATCATAAATATTATA+TGG | - | chr1.3:57492040-57492059 | MS.gene44019:intron | 15.0% |
| !! | TATCATAAATATTATATGGA+TGG | - | chr1.3:57492044-57492063 | MS.gene44019:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr1.3:57490486-57490505 | None:intergenic | 15.0% |
| !!! | TTCATTATTGATTTAGTAAA+TGG | - | chr1.3:57491445-57491464 | MS.gene44019:intron | 15.0% |
| !! | AAAAATAAGTCAATTCAAAC+AGG | + | chr1.3:57487373-57487392 | None:intergenic | 20.0% |
| !! | AAAATGGAAAATATCAAGAA+AGG | + | chr1.3:57488385-57488404 | None:intergenic | 20.0% |
| !! | AATACTTTATAAGTTCCTAT+TGG | - | chr1.3:57491079-57491098 | MS.gene44019:intron | 20.0% |
| !! | AATGAATGAGAATCTAAATA+GGG | + | chr1.3:57489559-57489578 | None:intergenic | 20.0% |
| !! | AATTTGGATAGTTATGATAA+TGG | + | chr1.3:57489533-57489552 | None:intergenic | 20.0% |
| !! | ACAATTACAATATGAATGTT+AGG | - | chr1.3:57487346-57487365 | MS.gene44019:intron | 20.0% |
| !! | ACTTTCCAAAAAATACTTAT+AGG | - | chr1.3:57490856-57490875 | MS.gene44019:intron | 20.0% |
| !! | CAAAAAATACTTATAGGAAA+AGG | - | chr1.3:57490862-57490881 | MS.gene44019:intron | 20.0% |
| !! | CAATTACAATATGAATGTTA+GGG | - | chr1.3:57487347-57487366 | MS.gene44019:intron | 20.0% |
| !! | CTAGATAAAATAATAGAAGT+CGG | + | chr1.3:57492438-57492457 | None:intergenic | 20.0% |
| !! | CTTGAAATAATTTCTTCATT+TGG | + | chr1.3:57491367-57491386 | None:intergenic | 20.0% |
| !! | GAAATAAACATTAAGACTTT+CGG | + | chr1.3:57489743-57489762 | None:intergenic | 20.0% |
| !! | GGAAAAAATTAAAGTTGTAT+TGG | + | chr1.3:57490526-57490545 | None:intergenic | 20.0% |
| !! | TCTATAATTTCTTGCATATA+TGG | - | chr1.3:57491809-57491828 | MS.gene44019:intron | 20.0% |
| !! | TTAATTGTTGAAAATGACAA+CGG | + | chr1.3:57491138-57491157 | None:intergenic | 20.0% |
| !! | TTATCATATCAATCCATAAT+TGG | - | chr1.3:57488404-57488423 | MS.gene44019:intron | 20.0% |
| !! | TTGTATGTGAATATATAGAT+GGG | + | chr1.3:57489089-57489108 | None:intergenic | 20.0% |
| !!! | ATATTTTGTTTTCAAGAACA+AGG | - | chr1.3:57490103-57490122 | MS.gene44019:CDS | 20.0% |
| !!! | ATGGATTGATATGATAAAAA+TGG | + | chr1.3:57488401-57488420 | None:intergenic | 20.0% |
| !!! | CTTTTCCTATAAGTATTTTT+TGG | + | chr1.3:57490864-57490883 | None:intergenic | 20.0% |
| !!! | GTATTTATTTTTGGAAACTA+CGG | + | chr1.3:57487328-57487347 | None:intergenic | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | - | chr1.3:57490605-57490624 | MS.gene44019:intron | 20.0% |
| !!! | TGATTTTAAAAATCGTTATC+AGG | - | chr1.3:57491491-57491510 | MS.gene44019:CDS | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr1.3:57490604-57490623 | MS.gene44019:intron | 20.0% |
| !!! | TGTTTACTTTTTTCATTAGT+CGG | + | chr1.3:57488286-57488305 | None:intergenic | 20.0% |
| !!! | TTTTACTCATAATAGTTTAC+TGG | - | chr1.3:57492085-57492104 | MS.gene44019:intron | 20.0% |
| ! | AAAAATAAGTCAATCCAGAT+GGG | - | chr1.3:57487536-57487555 | MS.gene44019:intron | 25.0% |
| ! | AATAACATATACAAACTCGT+TGG | - | chr1.3:57489963-57489982 | MS.gene44019:CDS | 25.0% |
| ! | AATAATTTCTTCATTTGGCA+AGG | + | chr1.3:57491362-57491381 | None:intergenic | 25.0% |
| ! | AATACATTAGCCATATATCT+TGG | + | chr1.3:57488113-57488132 | None:intergenic | 25.0% |
| ! | AATCAACTGGAAAATAAAGT+TGG | + | chr1.3:57492316-57492335 | None:intergenic | 25.0% |
| ! | AATCTAAATAGGGAGAAATT+TGG | + | chr1.3:57489549-57489568 | None:intergenic | 25.0% |
| ! | AGAAAACATATTGTAATTGC+AGG | + | chr1.3:57492370-57492389 | None:intergenic | 25.0% |
| ! | ATAATTTCTTCATTTGGCAA+GGG | + | chr1.3:57491361-57491380 | None:intergenic | 25.0% |
| ! | ATAGAGTAGCACATTATATT+TGG | + | chr1.3:57487146-57487165 | None:intergenic | 25.0% |
| ! | CAATGAATGAGAATCTAAAT+AGG | + | chr1.3:57489560-57489579 | None:intergenic | 25.0% |
| ! | CAGGAAAATTTATTTGGAAA+GGG | + | chr1.3:57489002-57489021 | None:intergenic | 25.0% |
| ! | CTATTAAATGCATTTCTTGT+AGG | - | chr1.3:57489238-57489257 | MS.gene44019:intron | 25.0% |
| ! | CTCATATAATGTGTTGAAAT+TGG | - | chr1.3:57487993-57488012 | MS.gene44019:intron | 25.0% |
| ! | GTGAAAAATTTCTTTCTTTC+TGG | - | chr1.3:57491639-57491658 | MS.gene44019:intron | 25.0% |
| ! | GTTGAAATTGGATGTTATTA+TGG | - | chr1.3:57488005-57488024 | MS.gene44019:intron | 25.0% |
| ! | GTTGTATGTGAATATATAGA+TGG | + | chr1.3:57489090-57489109 | None:intergenic | 25.0% |
| ! | TATGTATCAGACTTATGATA+AGG | - | chr1.3:57488862-57488881 | MS.gene44019:intron | 25.0% |
| ! | TCAGGAAAATTTATTTGGAA+AGG | + | chr1.3:57489003-57489022 | None:intergenic | 25.0% |
| ! | TTATGAACAGACAATAGTTT+CGG | - | chr1.3:57488620-57488639 | MS.gene44019:intron | 25.0% |
| ! | TTTATGATAAATCTGCTGAT+GGG | - | chr1.3:57489621-57489640 | MS.gene44019:CDS | 25.0% |
| !! | AGATTGTTTAGTATAGCTTT+TGG | + | chr1.3:57487084-57487103 | None:intergenic | 25.0% |
| !! | ATAATATTCAGGTTCTACAT+GGG | - | chr1.3:57487699-57487718 | MS.gene44019:intron | 25.0% |
| !! | GAAAGAAAGAAATTTTTCAC+TGG | + | chr1.3:57491639-57491658 | None:intergenic | 25.0% |
| !! | TTTGATACAGTTCTTTTTGT+TGG | + | chr1.3:57487573-57487592 | None:intergenic | 25.0% |
| !!! | ATTTTGGCATGAATTGTTAA+GGG | - | chr1.3:57487645-57487664 | MS.gene44019:intron | 25.0% |
| !!! | TAAGAGCATTTTTGTAAGTT+AGG | - | chr1.3:57491015-57491034 | MS.gene44019:intron | 25.0% |
| !!! | TATTCTCTTTCCCTATTTTT+TGG | - | chr1.3:57488343-57488362 | MS.gene44019:intron | 25.0% |
| AAAACCTAAAATATGTGACG+AGG | + | chr1.3:57491990-57492009 | None:intergenic | 30.0% | |
| AAAGAGAATACAACTGAAGA+AGG | + | chr1.3:57488333-57488352 | None:intergenic | 30.0% | |
| AAAGCAAGAAAAATCTGCAT+CGG | + | chr1.3:57490239-57490258 | None:intergenic | 30.0% | |
| AAAGTATATCACCTTTGACA+AGG | + | chr1.3:57489669-57489688 | None:intergenic | 30.0% | |
| AAATTGTGTGAGAGAAAAGT+TGG | + | chr1.3:57490566-57490585 | None:intergenic | 30.0% | |
| AAGTTGAAAGTTGCTATCAT+TGG | - | chr1.3:57487873-57487892 | MS.gene44019:CDS | 30.0% | |
| AATATTCCACTTTCAACTGT+GGG | - | chr1.3:57492226-57492245 | MS.gene44019:intron | 30.0% | |
| ACACAACAAAAAAAGTTGGA+AGG | + | chr1.3:57486960-57486979 | None:intergenic | 30.0% | |
| AGAGAAAAAAACAGTAAAGC+TGG | + | chr1.3:57491227-57491246 | None:intergenic | 30.0% | |
| AGGAACCAAATACTTACAAT+GGG | - | chr1.3:57491035-57491054 | MS.gene44019:intron | 30.0% | |
| ATAGTCCCATTGTAAGTATT+TGG | + | chr1.3:57491043-57491062 | None:intergenic | 30.0% | |
| ATGAGATCAATACAAAAACC+AGG | + | chr1.3:57489831-57489850 | None:intergenic | 30.0% | |
| ATGATAGCAACTTTCAACTT+CGG | + | chr1.3:57487873-57487892 | None:intergenic | 30.0% | |
| ATTGCTGCATTTGATTGAAT+GGG | - | chr1.3:57491910-57491929 | MS.gene44019:intron | 30.0% | |
| CAAAAATAAGTCAATCCAGA+TGG | - | chr1.3:57487535-57487554 | MS.gene44019:intron | 30.0% | |
| CACAACAAAAAAAGTTGGAA+GGG | + | chr1.3:57486959-57486978 | None:intergenic | 30.0% | |
| CACGAGTATTCAAAAAATGT+GGG | - | chr1.3:57489301-57489320 | MS.gene44019:intron | 30.0% | |
| CCAAACACAACAAAAAAAGT+TGG | + | chr1.3:57486964-57486983 | None:intergenic | 30.0% | |
| CTGAAATGTTTAATCTGTTC+AGG | - | chr1.3:57492465-57492484 | MS.gene44019:intron | 30.0% | |
| CTTTATGATAAATCTGCTGA+TGG | - | chr1.3:57489620-57489639 | MS.gene44019:CDS | 30.0% | |
| CTTTATTAAACGCTACCAAT+AGG | + | chr1.3:57491097-57491116 | None:intergenic | 30.0% | |
| GACTTCTTTAATTCATTGTC+CGG | - | chr1.3:57486783-57486802 | MS.gene44019:CDS | 30.0% | |
| GCTTCGTCAAATTTATCAAA+CGG | - | chr1.3:57492253-57492272 | MS.gene44019:intron | 30.0% | |
| GTAGCACATTATATTTGGAT+TGG | + | chr1.3:57487141-57487160 | None:intergenic | 30.0% | |
| GTCAAAAACAGTTAGAGAAA+AGG | + | chr1.3:57487962-57487981 | None:intergenic | 30.0% | |
| GTCTTAATGTTTATTTCCTC+AGG | - | chr1.3:57489746-57489765 | MS.gene44019:intron | 30.0% | |
| GTTAAATGTGCCAAGATATA+TGG | - | chr1.3:57488100-57488119 | MS.gene44019:intron | 30.0% | |
| TAACAGAAGTTTGTATTAGC+AGG | - | chr1.3:57492156-57492175 | MS.gene44019:intron | 30.0% | |
| TAATATTCCACTTTCAACTG+TGG | - | chr1.3:57492225-57492244 | MS.gene44019:intron | 30.0% | |
| TAATTCATGTAGTGCTAGTT+TGG | - | chr1.3:57490829-57490848 | MS.gene44019:intron | 30.0% | |
| TACAGGTATGCCAAAAAATA+GGG | + | chr1.3:57488356-57488375 | None:intergenic | 30.0% | |
| TAGGAACCAAATACTTACAA+TGG | - | chr1.3:57491034-57491053 | MS.gene44019:intron | 30.0% | |
| TAGGGAATGTTACATAGAAT+CGG | + | chr1.3:57487764-57487783 | None:intergenic | 30.0% | |
| TATAATAGTAGTCAAGAGGA+TGG | + | chr1.3:57491699-57491718 | None:intergenic | 30.0% | |
| TATTGCTGCATTTGATTGAA+TGG | - | chr1.3:57491909-57491928 | MS.gene44019:intron | 30.0% | |
| TCCATAAGCTGAAAACAATT+TGG | + | chr1.3:57487037-57487056 | None:intergenic | 30.0% | |
| TGAGATCAATACAAAAACCA+GGG | + | chr1.3:57489830-57489849 | None:intergenic | 30.0% | |
| TGGTCATCTGTTGTTAAAAT+CGG | - | chr1.3:57491555-57491574 | MS.gene44019:CDS | 30.0% | |
| TTTCAACACATTATATGAGC+AGG | + | chr1.3:57487992-57488011 | None:intergenic | 30.0% | |
| ! | AATTTTTCACTGGTGTCTTT+TGG | + | chr1.3:57491629-57491648 | None:intergenic | 30.0% |
| ! | ATGAGGTATTTCACATAAGA+TGG | + | chr1.3:57491955-57491974 | None:intergenic | 30.0% |
| ! | ATTTCCTCGTCACATATTTT+AGG | - | chr1.3:57491983-57492002 | MS.gene44019:intron | 30.0% |
| ! | GATAATATTCAGGTTCTACA+TGG | - | chr1.3:57487698-57487717 | MS.gene44019:intron | 30.0% |
| ! | TACGAGTCAAGATCTTTTAT+TGG | - | chr1.3:57488173-57488192 | MS.gene44019:intron | 30.0% |
| ! | TGTGTCAAATTTTCAGCTTA+GGG | + | chr1.3:57487782-57487801 | None:intergenic | 30.0% |
| ! | TGTTTTCAGCTTATGGAAAT+TGG | - | chr1.3:57487040-57487059 | MS.gene44019:intron | 30.0% |
| ! | TTAATTTTTCTTCGCCTTGT+TGG | - | chr1.3:57488428-57488447 | MS.gene44019:intron | 30.0% |
| ! | TTGTGTCAAATTTTCAGCTT+AGG | + | chr1.3:57487783-57487802 | None:intergenic | 30.0% |
| ! | TTTTCAATTTTCTCTCATCC+AGG | - | chr1.3:57488142-57488161 | MS.gene44019:intron | 30.0% |
| !! | AATTACCTTAAGCTGATTTG+TGG | + | chr1.3:57488737-57488756 | None:intergenic | 30.0% |
| !! | GATTTTGGCATGAATTGTTA+AGG | - | chr1.3:57487644-57487663 | MS.gene44019:intron | 30.0% |
| !! | TAATTTTTCTTCGCCTTGTT+GGG | - | chr1.3:57488429-57488448 | MS.gene44019:intron | 30.0% |
| !! | TCCTTAGCTTTGTATTTGAA+CGG | - | chr1.3:57489032-57489051 | MS.gene44019:intron | 30.0% |
| !! | TCTTGTGCAAAGTTTGATTT+TGG | - | chr1.3:57487629-57487648 | MS.gene44019:intron | 30.0% |
| !! | TTAGATTTGCTATACAGCTA+AGG | + | chr1.3:57489151-57489170 | None:intergenic | 30.0% |
| !!! | CCAACTTTTTTTGTTGTGTT+TGG | - | chr1.3:57486961-57486980 | MS.gene44019:intron | 30.0% |
| !!! | TCTAACTGTTTTTGACTTGA+TGG | - | chr1.3:57487966-57487985 | MS.gene44019:intron | 30.0% |
| AAGCAAGAAAAATCTGCATC+GGG | + | chr1.3:57490238-57490257 | None:intergenic | 35.0% | |
| AATCAAATGCAGCAATAACC+AGG | + | chr1.3:57491906-57491925 | None:intergenic | 35.0% | |
| AATGCATTTATCCCGTGTAA+TGG | + | chr1.3:57488709-57488728 | None:intergenic | 35.0% | |
| AATTGTTAAGGGATCTTGCT+GGG | - | chr1.3:57487656-57487675 | MS.gene44019:intron | 35.0% | |
| ACAACTCAGATACAATGGTT+GGG | - | chr1.3:57490004-57490023 | MS.gene44019:CDS | 35.0% | |
| ACAGTACAACTCAGATACAA+TGG | - | chr1.3:57489999-57490018 | MS.gene44019:CDS | 35.0% | |
| ACTCACACCTTTGTAAACAA+AGG | - | chr1.3:57488493-57488512 | MS.gene44019:intron | 35.0% | |
| ACTGAATTGTTAACACATGG+AGG | + | chr1.3:57487259-57487278 | None:intergenic | 35.0% | |
| ACTTCTAAACCTTGAGATGA+TGG | + | chr1.3:57491531-57491550 | None:intergenic | 35.0% | |
| ACTTTGACATGAGTTGTTGA+TGG | - | chr1.3:57487598-57487617 | MS.gene44019:intron | 35.0% | |
| AGAGTCTTCTGTGAGTTTAT+TGG | - | chr1.3:57490364-57490383 | MS.gene44019:intron | 35.0% | |
| AGCTAAGGAGACAAATAATC+AGG | + | chr1.3:57489021-57489040 | None:intergenic | 35.0% | |
| ATCAAGTCAATGATAGGCTA+AGG | + | chr1.3:57489876-57489895 | None:intergenic | 35.0% | |
| ATCACAGTCAATAAACCCAA+GGG | + | chr1.3:57489342-57489361 | None:intergenic | 35.0% | |
| ATTGAGGGACATACGAAATT+TGG | - | chr1.3:57488949-57488968 | MS.gene44019:intron | 35.0% | |
| ATTGTTGAAAATGACAACGG+TGG | + | chr1.3:57491135-57491154 | None:intergenic | 35.0% | |
| CAGGTAGTTTAAACAATGTG+TGG | - | chr1.3:57491397-57491416 | MS.gene44019:intron | 35.0% | |
| CGAAATTTGGATAGTGTAAG+AGG | - | chr1.3:57488962-57488981 | MS.gene44019:intron | 35.0% | |
| CGACTAAGTATGTTATGCAA+TGG | - | chr1.3:57490772-57490791 | MS.gene44019:intron | 35.0% | |
| CGAGTATAATAGTAGTCAAG+AGG | + | chr1.3:57491703-57491722 | None:intergenic | 35.0% | |
| CTCACACCTTTGTAAACAAA+GGG | - | chr1.3:57488494-57488513 | MS.gene44019:intron | 35.0% | |
| CTCAGAATGTTAGAATCAAC+TGG | + | chr1.3:57492329-57492348 | None:intergenic | 35.0% | |
| CTCATGACTATGTTATGCAA+TGG | - | chr1.3:57491170-57491189 | MS.gene44019:CDS | 35.0% | |
| CTTCTAAACCTTGAGATGAT+GGG | + | chr1.3:57491530-57491549 | None:intergenic | 35.0% | |
| CTTTATGAACCCTTACATTC+CGG | - | chr1.3:57490162-57490181 | MS.gene44019:intron | 35.0% | |
| CTTTGACATGAGTTGTTGAT+GGG | - | chr1.3:57487599-57487618 | MS.gene44019:intron | 35.0% | |
| GAGTCTTCTGTGAGTTTATT+GGG | - | chr1.3:57490365-57490384 | MS.gene44019:intron | 35.0% | |
| GCACGAGTATTCAAAAAATG+TGG | - | chr1.3:57489300-57489319 | MS.gene44019:intron | 35.0% | |
| GCTGATATCAAGTCAATGAT+AGG | + | chr1.3:57489882-57489901 | None:intergenic | 35.0% | |
| GGAAATCTATTACTAACCGT+TGG | + | chr1.3:57486938-57486957 | None:intergenic | 35.0% | |
| GTACAGGTATGCCAAAAAAT+AGG | + | chr1.3:57488357-57488376 | None:intergenic | 35.0% | |
| GTGATTTGAGCGTAAATTGT+TGG | + | chr1.3:57490749-57490768 | None:intergenic | 35.0% | |
| GTTTGTGCTCGATAATATTC+AGG | - | chr1.3:57487688-57487707 | MS.gene44019:intron | 35.0% | |
| TACAACTCAGATACAATGGT+TGG | - | chr1.3:57490003-57490022 | MS.gene44019:CDS | 35.0% | |
| TACTCTTGACAATAAGTTCC+TGG | - | chr1.3:57491885-57491904 | MS.gene44019:intron | 35.0% | |
| TATCACAGTCAATAAACCCA+AGG | + | chr1.3:57489343-57489362 | None:intergenic | 35.0% | |
| TATTTCAAGAGTAGCGAAAC+AGG | - | chr1.3:57491378-57491397 | MS.gene44019:intron | 35.0% | |
| TCAACGTAAACATCACTTAC+TGG | + | chr1.3:57490321-57490340 | None:intergenic | 35.0% | |
| TCACACCTTTGTAAACAAAG+GGG | - | chr1.3:57488495-57488514 | MS.gene44019:intron | 35.0% | |
| TCACCAGATGTTTATTTGAG+CGG | - | chr1.3:57489446-57489465 | MS.gene44019:CDS | 35.0% | |
| TCCACTGAATTGTTAACACA+TGG | + | chr1.3:57487262-57487281 | None:intergenic | 35.0% | |
| TCCATGTGTTAACAATTCAG+TGG | - | chr1.3:57487258-57487277 | MS.gene44019:intron | 35.0% | |
| TGCAGAATCTAGAAATGTCA+AGG | - | chr1.3:57490036-57490055 | MS.gene44019:CDS | 35.0% | |
| TGCATAACATACTTAGTCGT+GGG | + | chr1.3:57490771-57490790 | None:intergenic | 35.0% | |
| TGTGGCAAACAATGCAAATA+TGG | + | chr1.3:57489390-57489409 | None:intergenic | 35.0% | |
| TGTGTTAACAATTCAGTGGA+CGG | - | chr1.3:57487262-57487281 | MS.gene44019:intron | 35.0% | |
| TTCGTGAACAAAATGAAGCA+AGG | + | chr1.3:57488560-57488579 | None:intergenic | 35.0% | |
| TTCTCATTCATTGCTGAAAC+AGG | - | chr1.3:57489567-57489586 | MS.gene44019:intron | 35.0% | |
| TTGCATAACATACTTAGTCG+TGG | + | chr1.3:57490772-57490791 | None:intergenic | 35.0% | |
| TTGCTGCATTTGATTGAATG+GGG | - | chr1.3:57491911-57491930 | MS.gene44019:intron | 35.0% | |
| TTTGACCACAAATCAGCTTA+AGG | - | chr1.3:57488729-57488748 | MS.gene44019:intron | 35.0% | |
| ! | AGAAATGTCAAGGTACTTCT+CGG | - | chr1.3:57490046-57490065 | MS.gene44019:CDS | 35.0% |
| ! | ATGGGATTGCATGTTTTCTT+TGG | - | chr1.3:57488242-57488261 | MS.gene44019:intron | 35.0% |
| ! | CTCTAGATTAGTTAGTCCTT+GGG | - | chr1.3:57487295-57487314 | MS.gene44019:intron | 35.0% |
| ! | GAGTCAAGATCTTTTATTGG+TGG | - | chr1.3:57488176-57488195 | MS.gene44019:intron | 35.0% |
| ! | GCCAAATTGTTTTCAGCTTA+TGG | - | chr1.3:57487033-57487052 | MS.gene44019:intron | 35.0% |
| ! | TCACTTCAGTTTGCTTCAAA+AGG | + | chr1.3:57488048-57488067 | None:intergenic | 35.0% |
| ! | TCTCTAGATTAGTTAGTCCT+TGG | - | chr1.3:57487294-57487313 | MS.gene44019:intron | 35.0% |
| ! | TTGAATGGGGTATCAAATGT+CGG | - | chr1.3:57491924-57491943 | MS.gene44019:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr1.3:57490696-57490715 | MS.gene44019:CDS | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr1.3:57490715-57490696 | None:intergenic | 35.0% |
| !! | AAGGTACTTCTCGGAATTTT+AGG | - | chr1.3:57490055-57490074 | MS.gene44019:CDS | 35.0% |
| !! | CAAGTGGAAATGGATTTTTG+AGG | - | chr1.3:57489125-57489144 | MS.gene44019:CDS | 35.0% |
| !! | GATTAACTGACTCGTCTATA+AGG | + | chr1.3:57491791-57491810 | None:intergenic | 35.0% |
| !! | GGAGTAACCTTTTAATTCCA+GGG | + | chr1.3:57489914-57489933 | None:intergenic | 35.0% |
| !! | GGTTCTTTTGTTGATAAACG+CGG | - | chr1.3:57488206-57488225 | MS.gene44019:intron | 35.0% |
| !! | TCTTTTATTGGTGGCAAAGT+TGG | - | chr1.3:57488185-57488204 | MS.gene44019:intron | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr1.3:57490480-57490461 | None:intergenic | 35.0% |
| !!! | TGTAGGTTAGTTTTTCAGAC+TGG | - | chr1.3:57489255-57489274 | MS.gene44019:intron | 35.0% |
| AAACTCACAGAAGACTCTCT+TGG | + | chr1.3:57490362-57490381 | None:intergenic | 40.0% | |
| AAAGTTGCTATCATTGGAGC+TGG | - | chr1.3:57487879-57487898 | MS.gene44019:CDS | 40.0% | |
| AAAGTTGGAGAGGGTAAAGT+TGG | + | chr1.3:57490551-57490570 | None:intergenic | 40.0% | |
| AAATATGGTGAGCATGCAAC+GGG | + | chr1.3:57489375-57489394 | None:intergenic | 40.0% | |
| AAGTACATCACAGATAGAGG+GGG | - | chr1.3:57489479-57489498 | MS.gene44019:CDS | 40.0% | |
| AAGTTGCTATCATTGGAGCT+GGG | - | chr1.3:57487880-57487899 | MS.gene44019:CDS | 40.0% | |
| AATAGTAGTCAAGAGGATGG+AGG | + | chr1.3:57491696-57491715 | None:intergenic | 40.0% | |
| AATGGATGAAACTGCACCAT+CGG | - | chr1.3:57490790-57490809 | MS.gene44019:intron | 40.0% | |
| ACCAAAAGGACTATTTCCTC+CGG | - | chr1.3:57487827-57487846 | MS.gene44019:CDS | 40.0% | |
| ACGCGGAAATCACATTGAAA+TGG | - | chr1.3:57488223-57488242 | MS.gene44019:intron | 40.0% | |
| AGATACATAGCCACAAGGTT+CGG | - | chr1.3:57486872-57486891 | MS.gene44019:CDS | 40.0% | |
| AGATGCAAATGACATCCTCA+AGG | + | chr1.3:57488826-57488845 | None:intergenic | 40.0% | |
| AGCAAGAAAAATCTGCATCG+GGG | + | chr1.3:57490237-57490256 | None:intergenic | 40.0% | |
| ATAGAGAAGGTTGTCTAACC+CGG | + | chr1.3:57490212-57490231 | None:intergenic | 40.0% | |
| ATAGTAGTCAAGAGGATGGA+GGG | + | chr1.3:57491695-57491714 | None:intergenic | 40.0% | |
| ATCAAGAAAGGCAGTAGTAC+AGG | + | chr1.3:57488373-57488392 | None:intergenic | 40.0% | |
| ATGTATCTTTGCGAAACGTG+TGG | + | chr1.3:57486860-57486879 | None:intergenic | 40.0% | |
| ATTGTTTGCCACAAAGACTG+AGG | - | chr1.3:57489397-57489416 | MS.gene44019:CDS | 40.0% | |
| CAAATATGGTGAGCATGCAA+CGG | + | chr1.3:57489376-57489395 | None:intergenic | 40.0% | |
| CACACCTTTGTAAACAAAGG+GGG | - | chr1.3:57488496-57488515 | MS.gene44019:intron | 40.0% | |
| CACATACAACCCACATACAA+AGG | - | chr1.3:57489100-57489119 | MS.gene44019:intron | 40.0% | |
| CCTGAAGACTATTACATCGA+GGG | - | chr1.3:57490280-57490299 | MS.gene44019:intron | 40.0% | |
| CGAGGAAATGCATGAATATG+AGG | + | chr1.3:57491972-57491991 | None:intergenic | 40.0% | |
| CGCGGAAATCACATTGAAAT+GGG | - | chr1.3:57488224-57488243 | MS.gene44019:intron | 40.0% | |
| CTAACCAGCAACATAAGCAT+CGG | + | chr1.3:57489796-57489815 | None:intergenic | 40.0% | |
| CTCAAGGTTTAGAAGTGACT+TGG | - | chr1.3:57491535-57491554 | MS.gene44019:CDS | 40.0% | |
| CTCTATCTGTGATGTACTTC+CGG | + | chr1.3:57489478-57489497 | None:intergenic | 40.0% | |
| GAAGTACATCACAGATAGAG+GGG | - | chr1.3:57489478-57489497 | MS.gene44019:CDS | 40.0% | |
| GAATTGTTAAGGGATCTTGC+TGG | - | chr1.3:57487655-57487674 | MS.gene44019:intron | 40.0% | |
| GATTACATAGACAGCATGGA+AGG | - | chr1.3:57492487-57492506 | MS.gene44019:intron | 40.0% | |
| GCCGTTCAAATACAAAGCTA+AGG | + | chr1.3:57489036-57489055 | None:intergenic | 40.0% | |
| GGCTACTGAGAAGAAAATTG+TGG | - | chr1.3:57489767-57489786 | MS.gene44019:CDS | 40.0% | |
| GGTCTAAATGGATCTTTACC+AGG | + | chr1.3:57491603-57491622 | None:intergenic | 40.0% | |
| GTAAACAAAGGGGGTCAAAT+TGG | - | chr1.3:57488505-57488524 | MS.gene44019:intron | 40.0% | |
| TACAAAGGAGCAAGTGGAAA+TGG | - | chr1.3:57489115-57489134 | MS.gene44019:CDS | 40.0% | |
| TACAGGACTTTCCTTGTCAA+AGG | - | chr1.3:57489655-57489674 | MS.gene44019:intron | 40.0% | |
| TCAGGATTACATAGACAGCA+TGG | - | chr1.3:57492483-57492502 | MS.gene44019:intron | 40.0% | |
| TCATAAAAGTAGCGCTCTCA+TGG | + | chr1.3:57488606-57488625 | None:intergenic | 40.0% | |
| TCCTGAAGACTATTACATCG+AGG | - | chr1.3:57490279-57490298 | MS.gene44019:intron | 40.0% | |
| TCTAAAGATTGCTGTGACAC+TGG | + | chr1.3:57492393-57492412 | None:intergenic | 40.0% | |
| TGGAAATTGGACATGTCATG+AGG | - | chr1.3:57487053-57487072 | MS.gene44019:intron | 40.0% | |
| TGTATCTTTGCGAAACGTGT+GGG | + | chr1.3:57486859-57486878 | None:intergenic | 40.0% | |
| TGTGAGAGAAAAGTTGGAGA+GGG | + | chr1.3:57490560-57490579 | None:intergenic | 40.0% | |
| TGTGCTTTCTTGTGTAGTCA+TGG | - | chr1.3:57488076-57488095 | MS.gene44019:CDS | 40.0% | |
| TTAACAATTCAGTGGACGGT+GGG | - | chr1.3:57487266-57487285 | MS.gene44019:intron | 40.0% | |
| TTACAATATGAAACCCCCAG+AGG | - | chr1.3:57487179-57487198 | MS.gene44019:intron | 40.0% | |
| TTCAGCCTATATCTGTGATG+CGG | - | chr1.3:57492534-57492553 | MS.gene44019:CDS | 40.0% | |
| TTGAAGTTGAGACCTAAGAG+AGG | + | chr1.3:57487234-57487253 | None:intergenic | 40.0% | |
| TTGCATCGTCAGTTCAACAT+AGG | - | chr1.3:57491193-57491212 | MS.gene44019:CDS | 40.0% | |
| TTGTAAGACTTGGGACTTAC+CGG | - | chr1.3:57487202-57487221 | MS.gene44019:intron | 40.0% | |
| ! | AAACAGGTTCCATCTAAGGT+GGG | - | chr1.3:57489583-57489602 | MS.gene44019:intron | 40.0% |
| ! | ATTTTCTTCTCAGTAGCCTG+AGG | + | chr1.3:57489765-57489784 | None:intergenic | 40.0% |
| ! | GAGCGCTTCTAAAAAAGTTG+AGG | + | chr1.3:57490965-57490984 | None:intergenic | 40.0% |
| ! | GGAAGTACATCACAGATAGA+GGG | - | chr1.3:57489477-57489496 | MS.gene44019:CDS | 40.0% |
| ! | GTCTTTTGGTCAGGTCTAAA+TGG | + | chr1.3:57491615-57491634 | None:intergenic | 40.0% |
| ! | TAGATTTTCGCTTCCCAGTT+GGG | - | chr1.3:57488680-57488699 | MS.gene44019:intron | 40.0% |
| ! | TCAATTTTCTCTCATCCAGG+TGG | - | chr1.3:57488145-57488164 | MS.gene44019:intron | 40.0% |
| ! | TTGACCCCCTTTGTTTACAA+AGG | + | chr1.3:57488503-57488522 | None:intergenic | 40.0% |
| ! | TTGACTCGTATATATCCACC+TGG | + | chr1.3:57488163-57488182 | None:intergenic | 40.0% |
| !! | GGGAGTAACCTTTTAATTCC+AGG | + | chr1.3:57489915-57489934 | None:intergenic | 40.0% |
| !! | TCAGACTGGTTTATGTCCAA+AGG | - | chr1.3:57489269-57489288 | MS.gene44019:intron | 40.0% |
| !! | TTCTGGCTCTTACACAAAAC+AGG | - | chr1.3:57491656-57491675 | MS.gene44019:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1.3:57490700-57490719 | MS.gene44019:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1.3:57490719-57490700 | None:intergenic | 40.0% |
| !!! | GCAGCTGCTGATATTTTTTG+TGG | - | chr1.3:57491750-57491769 | MS.gene44019:intron | 40.0% |
| AAAGGTTACTCCCATCAGAG+TGG | - | chr1.3:57489922-57489941 | MS.gene44019:intron | 45.0% | |
| AAAGTTGGAAGCTCTGTCCA+CGG | + | chr1.3:57492301-57492320 | None:intergenic | 45.0% | |
| AACAAAGGGGGTCAAATTGG+AGG | - | chr1.3:57488508-57488527 | MS.gene44019:intron | 45.0% | |
| ACTCTTGGATCAAGGACATG+AGG | - | chr1.3:57487929-57487948 | MS.gene44019:intron | 45.0% | |
| AGAGCTCTTGTTGATCCAGA+TGG | - | chr1.3:57488923-57488942 | MS.gene44019:intron | 45.0% | |
| AGGCAACTGAAGAAAGCTAC+CGG | - | chr1.3:57490190-57490209 | MS.gene44019:intron | 45.0% | |
| ATGAACCCTTACATTCCGGA+TGG | - | chr1.3:57490166-57490185 | MS.gene44019:intron | 45.0% | |
| ATGCGTAAACAAGCTCAGTC+AGG | - | chr1.3:57487115-57487134 | MS.gene44019:intron | 45.0% | |
| ATTCATCTGCCAGCACCAAA+AGG | - | chr1.3:57487813-57487832 | MS.gene44019:CDS | 45.0% | |
| CAACTTTCAACTTCGGTCCT+CGG | + | chr1.3:57487866-57487885 | None:intergenic | 45.0% | |
| CAAGTTGCTTGATGAACCGA+TGG | + | chr1.3:57490809-57490828 | None:intergenic | 45.0% | |
| CCACTTGCTCCTTTGTATGT+GGG | + | chr1.3:57489112-57489131 | None:intergenic | 45.0% | |
| CCCTCGATGTAATAGTCTTC+AGG | + | chr1.3:57490283-57490302 | None:intergenic | 45.0% | |
| CGCAAAGATACATAGCCACA+AGG | - | chr1.3:57486867-57486886 | MS.gene44019:CDS | 45.0% | |
| CTAACCGTTGGTACTCATGT+CGG | + | chr1.3:57486926-57486945 | None:intergenic | 45.0% | |
| CTCTTATCAGTGCTCGATCA+TGG | + | chr1.3:57491001-57491020 | None:intergenic | 45.0% | |
| CTGTGATGTACTTCCGGATA+GGG | + | chr1.3:57489472-57489491 | None:intergenic | 45.0% | |
| GAAACAGGTTCCATCTAAGG+TGG | - | chr1.3:57489582-57489601 | MS.gene44019:intron | 45.0% | |
| GACTATTACATCGAGGGACA+AGG | - | chr1.3:57490286-57490305 | MS.gene44019:intron | 45.0% | |
| GCAAGAAAAATCTGCATCGG+GGG | + | chr1.3:57490236-57490255 | None:intergenic | 45.0% | |
| GCGATGTCCCTGGAATTAAA+AGG | - | chr1.3:57489904-57489923 | MS.gene44019:intron | 45.0% | |
| GCTGAAACAGGTTCCATCTA+AGG | - | chr1.3:57489579-57489598 | MS.gene44019:intron | 45.0% | |
| GCTTAAGGTAATTGCGTGAC+TGG | - | chr1.3:57488744-57488763 | MS.gene44019:intron | 45.0% | |
| GTGTGAGAGAAAAGTTGGAG+AGG | + | chr1.3:57490561-57490580 | None:intergenic | 45.0% | |
| GTTAACAATTCAGTGGACGG+TGG | - | chr1.3:57487265-57487284 | MS.gene44019:intron | 45.0% | |
| GTTTCCGACATGAGTACCAA+CGG | - | chr1.3:57486919-57486938 | MS.gene44019:CDS | 45.0% | |
| TAGAGGGGGCAGGTATAATT+CGG | - | chr1.3:57489493-57489512 | MS.gene44019:CDS | 45.0% | |
| TATCAGCAGCTGCAAACTTG+AGG | + | chr1.3:57491743-57491762 | None:intergenic | 45.0% | |
| TCAGCCTATATCTGTGATGC+GGG | - | chr1.3:57492535-57492554 | MS.gene44019:CDS | 45.0% | |
| TCCACGGTAGTCAAAAGGAA+AGG | + | chr1.3:57492285-57492304 | None:intergenic | 45.0% | |
| TCCACTTGCTCCTTTGTATG+TGG | + | chr1.3:57489113-57489132 | None:intergenic | 45.0% | |
| TCCCAAGTCTTACAACCTCT+GGG | + | chr1.3:57487197-57487216 | None:intergenic | 45.0% | |
| TCGTTGTTCCCATCATCTCA+AGG | - | chr1.3:57491519-57491538 | MS.gene44019:CDS | 45.0% | |
| TCTGTGATGTACTTCCGGAT+AGG | + | chr1.3:57489473-57489492 | None:intergenic | 45.0% | |
| TGATAAGGCTAGAAATGCCG+TGG | - | chr1.3:57488877-57488896 | MS.gene44019:intron | 45.0% | |
| TGATCCAGATGGTGCATTGA+GGG | - | chr1.3:57488934-57488953 | MS.gene44019:intron | 45.0% | |
| TGCAAATGACATCCTCAAGG+AGG | + | chr1.3:57488823-57488842 | None:intergenic | 45.0% | |
| TGGTATACTAAGTGCCCATC+TGG | + | chr1.3:57487553-57487572 | None:intergenic | 45.0% | |
| TTGATCCAGATGGTGCATTG+AGG | - | chr1.3:57488933-57488952 | MS.gene44019:intron | 45.0% | |
| TTGGAGAGGGTAAAGTTGGA+AGG | + | chr1.3:57490547-57490566 | None:intergenic | 45.0% | |
| TTTAATTCCAGGGACATCGC+AGG | + | chr1.3:57489904-57489923 | None:intergenic | 45.0% | |
| TTTATTTGAGCGGCCCTATC+CGG | - | chr1.3:57489456-57489475 | MS.gene44019:CDS | 45.0% | |
| ! | AACAGGTTCCATCTAAGGTG+GGG | - | chr1.3:57489584-57489603 | MS.gene44019:intron | 45.0% |
| ! | AATGGGGTATCAAATGTCGG+TGG | - | chr1.3:57491927-57491946 | MS.gene44019:intron | 45.0% |
| ! | AGATTAGTTAGTCCTTGGGC+AGG | - | chr1.3:57487299-57487318 | MS.gene44019:intron | 45.0% |
| ! | AGATTTTCGCTTCCCAGTTG+GGG | - | chr1.3:57488681-57488700 | MS.gene44019:intron | 45.0% |
| ! | ATGGAAGGTGCAACCTTATC+CGG | - | chr1.3:57492502-57492521 | MS.gene44019:CDS | 45.0% |
| ! | CGGAAGTACATCACAGATAG+AGG | - | chr1.3:57489476-57489495 | MS.gene44019:CDS | 45.0% |
| ! | CTAGATTTTCGCTTCCCAGT+TGG | - | chr1.3:57488679-57488698 | MS.gene44019:intron | 45.0% |
| ! | GTCAATAAACCCAAGGGCAT+AGG | + | chr1.3:57489336-57489355 | None:intergenic | 45.0% |
| ! | TCAACAAGAGCTCTGACAAC+TGG | + | chr1.3:57488917-57488936 | None:intergenic | 45.0% |
| ! | TCATTTGGCAAGGGCATGTA+TGG | + | chr1.3:57491352-57491371 | None:intergenic | 45.0% |
| ! | TCCGGAGGAAATAGTCCTTT+TGG | + | chr1.3:57487831-57487850 | None:intergenic | 45.0% |
| ! | TTCACTGGTGTCTTTTGGTC+AGG | + | chr1.3:57491624-57491643 | None:intergenic | 45.0% |
| !! | ACCTTTCCTTTTGACTACCG+TGG | - | chr1.3:57492281-57492300 | MS.gene44019:intron | 45.0% |
| !! | ATGAGTGTCGCTTTAGGCTT+TGG | + | chr1.3:57490689-57490708 | None:intergenic | 45.0% |
| !! | GACTGGTTTATGTCCAAAGG+TGG | - | chr1.3:57489272-57489291 | MS.gene44019:intron | 45.0% |
| !! | GATGGGAGCACTTATGTTAC+AGG | - | chr1.3:57489638-57489657 | MS.gene44019:CDS | 45.0% |
| !! | GGAAATAGTCCTTTTGGTGC+TGG | + | chr1.3:57487825-57487844 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1.3:57490699-57490718 | MS.gene44019:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr1.3:57490718-57490699 | None:intergenic | 45.0% |
| !!! | TGCGCTTTTTTACCTCCTTG+AGG | - | chr1.3:57488808-57488827 | MS.gene44019:intron | 45.0% |
| AAACTACGGTATCCTGCCCA+AGG | + | chr1.3:57487314-57487333 | None:intergenic | 50.0% | |
| AACCCTTCAGCATCCGCAAA+AGG | + | chr1.3:57489427-57489446 | None:intergenic | 50.0% | |
| AAGGGAAGCCTCAGTCTTTG+TGG | + | chr1.3:57489408-57489427 | None:intergenic | 50.0% | |
| AATTCAGTGGACGGTGGGAT+TGG | - | chr1.3:57487271-57487290 | MS.gene44019:intron | 50.0% | |
| ACCCTTCAGCATCCGCAAAA+GGG | + | chr1.3:57489426-57489445 | None:intergenic | 50.0% | |
| ACTCGTGCTGGAGATTCTGT+TGG | - | chr1.3:57486823-57486842 | MS.gene44019:CDS | 50.0% | |
| AGCCTATATCTGTGATGCGG+GGG | - | chr1.3:57492537-57492556 | MS.gene44019:CDS | 50.0% | |
| AGGTTCTACATGGGTCGTGT+GGG | - | chr1.3:57487708-57487727 | MS.gene44019:intron | 50.0% | |
| ATAGGCTGAAGTTTGCCTGC+CGG | + | chr1.3:57492524-57492543 | None:intergenic | 50.0% | |
| ATCAGATGTGTTCTGACGCC+AGG | - | chr1.3:57491322-57491341 | MS.gene44019:intron | 50.0% | |
| ATCCAGTTGCCTATGCCCTT+GGG | - | chr1.3:57489324-57489343 | MS.gene44019:intron | 50.0% | |
| ATGTCCCTCAATGCACCATC+TGG | + | chr1.3:57488941-57488960 | None:intergenic | 50.0% | |
| CAAACTCGTTGGAGTTCCTG+TGG | - | chr1.3:57489974-57489993 | MS.gene44019:CDS | 50.0% | |
| CAGCCTATATCTGTGATGCG+GGG | - | chr1.3:57492536-57492555 | MS.gene44019:CDS | 50.0% | |
| CCAAGTCTTACAACCTCTGG+GGG | + | chr1.3:57487195-57487214 | None:intergenic | 50.0% | |
| CCCAAGTCTTACAACCTCTG+GGG | + | chr1.3:57487196-57487215 | None:intergenic | 50.0% | |
| CCCACATACAAAGGAGCAAG+TGG | - | chr1.3:57489109-57489128 | MS.gene44019:CDS | 50.0% | |
| CCCCAGAGGTTGTAAGACTT+GGG | - | chr1.3:57487193-57487212 | MS.gene44019:intron | 50.0% | |
| CTCTGTCCACGGTAGTCAAA+AGG | + | chr1.3:57492290-57492309 | None:intergenic | 50.0% | |
| CTGAGTTGTACTGTGACCAC+AGG | + | chr1.3:57489993-57490012 | None:intergenic | 50.0% | |
| GAAGCCGATGCTTATGTTGC+TGG | - | chr1.3:57489789-57489808 | MS.gene44019:CDS | 50.0% | |
| GATCTTTACCAGGTCCCTCA+CGG | + | chr1.3:57491593-57491612 | None:intergenic | 50.0% | |
| GCTCTACCCACAGTTGAAAG+TGG | + | chr1.3:57492235-57492254 | None:intergenic | 50.0% | |
| GGCAACTGAAGAAAGCTACC+GGG | - | chr1.3:57490191-57490210 | MS.gene44019:intron | 50.0% | |
| GGGCCGCTCAAATAAACATC+TGG | + | chr1.3:57489452-57489471 | None:intergenic | 50.0% | |
| GTAGCAGAGAGTGAAGTTGC+CGG | + | chr1.3:57486805-57486824 | None:intergenic | 50.0% | |
| GTCCCAAGTCTTACAACCTC+TGG | + | chr1.3:57487198-57487217 | None:intergenic | 50.0% | |
| GTTACTCCCATCAGAGTGGA+GGG | - | chr1.3:57489926-57489945 | MS.gene44019:CDS | 50.0% | |
| TGAAGTTTGCCTGCCGGATA+AGG | + | chr1.3:57492518-57492537 | None:intergenic | 50.0% | |
| TTCCCCCGCATCACAGATAT+AGG | + | chr1.3:57492542-57492561 | None:intergenic | 50.0% | |
| TTCGGTCCTCGGTAATGTTC+CGG | + | chr1.3:57487855-57487874 | None:intergenic | 50.0% | |
| TTCTTCAGTTGCCTGCCATC+CGG | + | chr1.3:57490184-57490203 | None:intergenic | 50.0% | |
| ! | AAGGGCATGTATGGATCTCC+TGG | + | chr1.3:57491343-57491362 | None:intergenic | 50.0% |
| ! | AGAATTGGTGGCATTGCGGA+AGG | - | chr1.3:57492561-57492580 | MS.gene44019:CDS | 50.0% |
| ! | AGACTGAGGCTTCCCTTTTG+CGG | - | chr1.3:57489411-57489430 | MS.gene44019:CDS | 50.0% |
| ! | CCTTTTCCCTCCACTCTGAT+GGG | + | chr1.3:57489935-57489954 | None:intergenic | 50.0% |
| ! | GGGAAGAATTGGTGGCATTG+CGG | - | chr1.3:57492557-57492576 | MS.gene44019:CDS | 50.0% |
| ! | TCCCTTTTGCGGATGCTGAA+GGG | - | chr1.3:57489422-57489441 | MS.gene44019:CDS | 50.0% |
| ! | TCCTTTTCCCTCCACTCTGA+TGG | + | chr1.3:57489936-57489955 | None:intergenic | 50.0% |
| ! | TTCCCTTTTGCGGATGCTGA+AGG | - | chr1.3:57489421-57489440 | MS.gene44019:CDS | 50.0% |
| ! | TTCTTCGCCTTGTTGGGTCT+AGG | - | chr1.3:57488435-57488454 | MS.gene44019:intron | 50.0% |
| !! | GGTTAGTAGTTTGCTTGCCC+TGG | - | chr1.3:57489810-57489829 | MS.gene44019:CDS | 50.0% |
| AAGGTGCAACCTTATCCGGC+AGG | - | chr1.3:57492506-57492525 | MS.gene44019:CDS | 55.0% | |
| ACATCACAGATAGAGGGGGC+AGG | - | chr1.3:57489483-57489502 | MS.gene44019:CDS | 55.0% | |
| ACCCTTACATTCCGGATGGC+AGG | - | chr1.3:57490170-57490189 | MS.gene44019:intron | 55.0% | |
| AGCAACGAAGCCGAACCTTG+TGG | + | chr1.3:57486885-57486904 | None:intergenic | 55.0% | |
| AGGACTATTTCCTCCGGAGC+CGG | - | chr1.3:57487833-57487852 | MS.gene44019:CDS | 55.0% | |
| ATATCAGCCTGCGATGTCCC+TGG | - | chr1.3:57489894-57489913 | MS.gene44019:intron | 55.0% | |
| ATCATTGGAGCTGGGCTTGC+CGG | - | chr1.3:57487888-57487907 | MS.gene44019:CDS | 55.0% | |
| CAGGTTCTACATGGGTCGTG+TGG | - | chr1.3:57487707-57487726 | MS.gene44019:intron | 55.0% | |
| CCCATCAGAGTGGAGGGAAA+AGG | - | chr1.3:57489932-57489951 | MS.gene44019:CDS | 55.0% | |
| CCCCCAGAGGTTGTAAGACT+TGG | - | chr1.3:57487192-57487211 | MS.gene44019:intron | 55.0% | |
| CTCTGCATCCCCACCTTAGA+TGG | + | chr1.3:57489595-57489614 | None:intergenic | 55.0% | |
| CTGTGATGCGGGGGAAGAAT+TGG | - | chr1.3:57492546-57492565 | MS.gene44019:CDS | 55.0% | |
| GATCCAGTTGCCTATGCCCT+TGG | - | chr1.3:57489323-57489342 | MS.gene44019:intron | 55.0% | |
| GCAGCTGCAAACTTGAGGTC+TGG | + | chr1.3:57491738-57491757 | None:intergenic | 55.0% | |
| GCCTGCCATCCGGAATGTAA+GGG | + | chr1.3:57490174-57490193 | None:intergenic | 55.0% | |
| GCGGTCGAACTCTTGGATCA+AGG | - | chr1.3:57487921-57487940 | MS.gene44019:intron | 55.0% | |
| GGATCTTGCTGGGTGAGAAC+TGG | - | chr1.3:57487666-57487685 | MS.gene44019:intron | 55.0% | |
| GGCCAATCTCTGTACCGTGA+GGG | - | chr1.3:57491576-57491595 | MS.gene44019:CDS | 55.0% | |
| GGGAATGCGCATGTGCAATG+TGG | + | chr1.3:57489069-57489088 | None:intergenic | 55.0% | |
| GGTTACTCCCATCAGAGTGG+AGG | - | chr1.3:57489925-57489944 | MS.gene44019:CDS | 55.0% | |
| GGTTCGGCTTCGTTGCTCTT+TGG | - | chr1.3:57486888-57486907 | MS.gene44019:CDS | 55.0% | |
| GTCAACTGCGGTCGAACTCT+TGG | - | chr1.3:57487914-57487933 | MS.gene44019:intron | 55.0% | |
| GTCCCTCACGGTACAGAGAT+TGG | + | chr1.3:57491581-57491600 | None:intergenic | 55.0% | |
| TACCGGTGTGCTCCTCTCTT+AGG | - | chr1.3:57487219-57487238 | MS.gene44019:intron | 55.0% | |
| TCACTCTCTGCTACTCGTGC+TGG | - | chr1.3:57486811-57486830 | MS.gene44019:CDS | 55.0% | |
| TGATGCGGGGGAAGAATTGG+TGG | - | chr1.3:57492549-57492568 | MS.gene44019:CDS | 55.0% | |
| TGCCTGCCATCCGGAATGTA+AGG | + | chr1.3:57490175-57490194 | None:intergenic | 55.0% | |
| TGGACTCAGTGCAAGAGCCA+CGG | + | chr1.3:57488897-57488916 | None:intergenic | 55.0% | |
| TTCGACCGCAGTTGACATGC+CGG | + | chr1.3:57487910-57487929 | None:intergenic | 55.0% | |
| TTGTTGGGTCTAGGTGGGTG+CGG | - | chr1.3:57488444-57488463 | MS.gene44019:intron | 55.0% | |
| ! | AACCCAAGGGCATAGGCAAC+TGG | + | chr1.3:57489329-57489348 | None:intergenic | 55.0% |
| ! | CTGCATCGGGGGTATAGAGA+AGG | + | chr1.3:57490225-57490244 | None:intergenic | 55.0% |
| ! | GACCTAAGAGAGGAGCACAC+CGG | + | chr1.3:57487224-57487243 | None:intergenic | 55.0% |
| ! | TCGCCTTGTTGGGTCTAGGT+GGG | - | chr1.3:57488439-57488458 | MS.gene44019:intron | 55.0% |
| ! | TTCGCCTTGTTGGGTCTAGG+TGG | - | chr1.3:57488438-57488457 | MS.gene44019:intron | 55.0% |
| ACTCGTGCGTGTGCCACCTT+TGG | + | chr1.3:57489288-57489307 | None:intergenic | 60.0% | |
| CCTCGGTAATGTTCCGGCTC+CGG | + | chr1.3:57487849-57487868 | None:intergenic | 60.0% | |
| CGGCCAATCTCTGTACCGTG+AGG | - | chr1.3:57491575-57491594 | MS.gene44019:CDS | 60.0% | |
| CGTGTAATGGCGCCCCAACT+GGG | + | chr1.3:57488696-57488715 | None:intergenic | 60.0% | |
| GCACCCACCTAGACCCAACA+AGG | + | chr1.3:57488445-57488464 | None:intergenic | 60.0% | |
| GCTTGCCGGCATGTCAACTG+CGG | - | chr1.3:57487902-57487921 | MS.gene44019:intron | 60.0% | |
| TCTCTGTACCGTGAGGGACC+TGG | - | chr1.3:57491582-57491601 | MS.gene44019:CDS | 60.0% | |
| ! | CAGTTGGGGCGCCATTACAC+GGG | - | chr1.3:57488695-57488714 | MS.gene44019:intron | 60.0% |
| ! | CCAGTTGGGGCGCCATTACA+CGG | - | chr1.3:57488694-57488713 | MS.gene44019:intron | 60.0% |
| CCGGAGCCGGAACATTACCG+AGG | - | chr1.3:57487846-57487865 | MS.gene44019:CDS | 65.0% | |
| CCGTGTAATGGCGCCCCAAC+TGG | + | chr1.3:57488697-57488716 | None:intergenic | 65.0% | |
| CGGTAATGTTCCGGCTCCGG+AGG | + | chr1.3:57487846-57487865 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57486778 | 57492651 | 57486778 | ID=MS.gene44019 |
| chr1.3 | mRNA | 57486778 | 57492651 | 57486778 | ID=MS.gene44019.t1;Parent=MS.gene44019 |
| chr1.3 | exon | 57492489 | 57492651 | 57492489 | ID=MS.gene44019.t1.exon1;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57492489 | 57492651 | 57492489 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57491479 | 57491603 | 57491479 | ID=MS.gene44019.t1.exon2;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57491479 | 57491603 | 57491479 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57491131 | 57491265 | 57491131 | ID=MS.gene44019.t1.exon3;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57491131 | 57491265 | 57491131 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57490900 | 57490972 | 57490900 | ID=MS.gene44019.t1.exon4;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57490900 | 57490972 | 57490900 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57490679 | 57490752 | 57490679 | ID=MS.gene44019.t1.exon5;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57490679 | 57490752 | 57490679 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57490453 | 57490557 | 57490453 | ID=MS.gene44019.t1.exon6;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57490453 | 57490557 | 57490453 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57489925 | 57490169 | 57489925 | ID=MS.gene44019.t1.exon7;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57489925 | 57490169 | 57489925 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57489753 | 57489840 | 57489753 | ID=MS.gene44019.t1.exon8;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57489753 | 57489840 | 57489753 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57489619 | 57489661 | 57489619 | ID=MS.gene44019.t1.exon9;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57489619 | 57489661 | 57489619 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57489372 | 57489528 | 57489372 | ID=MS.gene44019.t1.exon10;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57489372 | 57489528 | 57489372 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57489109 | 57489237 | 57489109 | ID=MS.gene44019.t1.exon11;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57489109 | 57489237 | 57489109 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57488030 | 57488102 | 57488030 | ID=MS.gene44019.t1.exon12;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57488030 | 57488102 | 57488030 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57487752 | 57487916 | 57487752 | ID=MS.gene44019.t1.exon13;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57487752 | 57487916 | 57487752 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| chr1.3 | exon | 57486778 | 57486942 | 57486778 | ID=MS.gene44019.t1.exon14;Parent=MS.gene44019.t1 |
| chr1.3 | CDS | 57486778 | 57486942 | 57486778 | ID=cds.MS.gene44019.t1;Parent=MS.gene44019.t1 |
| Gene Sequence |
| Protein sequence |
