AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054408


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054408.t1 MTR_7g112140 97.681 1035 24 0 2 1036 47 1081 0.0 2086
MS.gene054408.t1 MTR_7g112140 95.749 1035 22 1 2 1036 47 1059 0.0 2035
MS.gene054408.t1 MTR_4g091060 43.000 100 57 0 115 214 32 131 3.54e-17 84.3
MS.gene054408.t1 MTR_4g022660 44.231 104 51 2 543 641 119 220 1.19e-16 85.1
MS.gene054408.t1 MTR_4g091060 39.496 119 64 1 115 225 91 209 1.25e-16 81.6
MS.gene054408.t1 MTR_4g022660 44.231 104 51 2 543 641 245 346 1.66e-16 84.7
MS.gene054408.t1 MTR_4g091060 39.496 119 64 1 115 225 91 209 1.74e-16 83.2
MS.gene054408.t1 MTR_7g026915 44.231 104 51 2 543 641 246 347 1.90e-16 84.7
MS.gene054408.t1 MTR_4g022660 44.231 104 51 2 543 641 245 346 1.96e-16 84.7
MS.gene054408.t1 MTR_7g026915 44.231 104 51 2 543 641 246 347 2.27e-16 84.7
MS.gene054408.t1 MTR_0937s0020 29.954 217 133 6 18 219 519 731 7.34e-14 76.6
MS.gene054408.t1 MTR_2g091220 25.641 195 126 4 28 214 11 194 2.22e-12 68.9
MS.gene054408.t1 MTR_2g091220 25.641 195 126 4 28 214 11 194 3.06e-12 68.6
MS.gene054408.t1 MTR_2g091220 25.641 195 126 4 28 214 11 194 5.35e-12 69.3
MS.gene054408.t1 MTR_8g090025 26.820 261 148 9 30 253 65 319 1.25e-11 67.8
MS.gene054408.t1 MTR_5g013910 26.754 228 152 6 15 234 5 225 1.70e-11 65.9
MS.gene054408.t1 MTR_8g090025 26.432 227 127 7 30 221 65 286 6.59e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054408.t1 AT1G56500 70.525 1028 265 5 10 1032 56 1050 0.0 1515
MS.gene054408.t1 AT1G56500 72.438 849 199 3 10 854 56 873 0.0 1291
MS.gene054408.t1 AT1G56500 69.580 881 230 5 157 1032 1 848 0.0 1285
MS.gene054408.t1 AT4G21470 36.719 128 73 2 87 214 74 193 8.50e-15 78.2
MS.gene054408.t1 AT3G07060 36.842 95 58 1 547 641 269 361 2.22e-13 75.1
MS.gene054408.t1 AT3G48420 32.599 227 128 9 29 236 77 297 7.88e-12 68.2
MS.gene054408.t1 AT2G38740 25.664 226 157 5 24 244 18 237 5.05e-11 64.7

Find 247 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTTGTTCTGCTCGATTTC+TGG 0.136427 7.4:-4374937 MS.gene054408:CDS
CGTTTGAAAGTTCTTGATTT+TGG 0.158237 7.4:+4365206 None:intergenic
CTTCTCGGATAATTTGTTTA+AGG 0.191811 7.4:-4368786 MS.gene054408:intron
TAAGCTGTTGGTCGGACTTT+TGG 0.209931 7.4:+4364427 None:intergenic
CTTCGTACCTTGGAGCTTAA+AGG 0.214578 7.4:-4365245 MS.gene054408:CDS
GAAGACTGAGCAAAATTAAT+TGG 0.214918 7.4:+4377280 None:intergenic
TTCTCTAAATTTAATGTAAT+CGG 0.266502 7.4:+4372876 None:intergenic
CTTTATACTCCATGGGTGGC+TGG 0.283856 7.4:+4375821 None:intergenic
CAGTATGCAAAGCCTGATTC+TGG 0.290339 7.4:-4379334 MS.gene054408:CDS
GGAACAGGAAAAGCTGGTTT+TGG 0.293269 7.4:-4367355 MS.gene054408:CDS
TTTCTACAGTTCATTGTTGT+TGG 0.299741 7.4:-4374583 MS.gene054408:intron
TTCTGCAGTCTTGTTTGATA+TGG 0.300718 7.4:-4380438 MS.gene054408:CDS
TTAACGTGCTACGGGGAAAT+AGG 0.300758 7.4:+4364398 None:intergenic
GGGAGGTGTGGCCTCTGTTA+AGG 0.301116 7.4:-4379503 MS.gene054408:CDS
TTGTACCTTCCAGTTATTTA+CGG 0.306796 7.4:+4376013 None:intergenic
GAGAAAGTGCGTACGCTTGC+TGG 0.306844 7.4:-4371151 MS.gene054408:CDS
ATAATTTGTGGGCAGGTTGC+AGG 0.310254 7.4:-4376099 MS.gene054408:intron
ACATCACCGTTGAAGTTTCC+TGG 0.311445 7.4:-4372831 MS.gene054408:CDS
TGAAGTGTTGCAGATCCTTC+TGG 0.313913 7.4:+4364881 None:intergenic
TGGCTGGTCAACATCAGATT+TGG 0.324358 7.4:-4370842 MS.gene054408:CDS
AGACATCCCAAGGTGAATTA+AGG 0.325544 7.4:+4370901 None:intergenic
GGAGGTGTGGCCTCTGTTAA+GGG 0.325635 7.4:-4379502 MS.gene054408:CDS
TTGATATTCACAGCGTCTTC+AGG 0.327974 7.4:+4364926 None:intergenic
GAAATGGCGTCAACGGTAAT+TGG 0.328936 7.4:+4365152 None:intergenic
AAGCTCCTTGCCCAACTTGC+TGG 0.329090 7.4:-4373811 MS.gene054408:CDS
ACATCAATAGCTAGCTTTCC+AGG 0.336128 7.4:+4372813 None:intergenic
GTGCGTACGCTTGCTGGAAA+TGG 0.336999 7.4:-4371145 MS.gene054408:CDS
TGCTGCAAAATCACAAGAAT+GGG 0.339591 7.4:-4380468 MS.gene054408:CDS
TTGTACCTGAGGGCGATTAA+AGG 0.345950 7.4:+4372127 None:intergenic
TTGCCTTTACCGTAAATAAC+TGG 0.347699 7.4:-4376022 MS.gene054408:CDS
TCAAGTTTAGACGGAAATTC+CGG 0.349119 7.4:+4375093 None:intergenic
GATTCTGGAATAGGATTTCC+AGG 0.351548 7.4:-4379319 MS.gene054408:CDS
AATTTCCGTCTAAACTTGAT+TGG 0.355599 7.4:-4375089 MS.gene054408:CDS
GTGAATATCAATCCTCTAGA+TGG 0.357226 7.4:-4364914 MS.gene054408:CDS
CTATTGATGTCCTCAATAAT+AGG 0.358030 7.4:-4372800 MS.gene054408:CDS
GAGGTTCTTTGAAATATATC+TGG 0.365815 7.4:-4379446 MS.gene054408:CDS
TGGCCAACGTTTGCTATCAT+TGG 0.368345 7.4:-4373844 MS.gene054408:CDS
TCTTCATCTGATGTGCTTGC+GGG 0.369857 7.4:-4377262 MS.gene054408:CDS
ACCAAGGGCTCTGATTATAT+TGG 0.372374 7.4:-4371121 MS.gene054408:CDS
TTACCTCATTTGTGCAGCTT+TGG 0.375564 7.4:+4378194 None:intergenic
ATACAAATCCTTGCTGTTTG+AGG 0.375894 7.4:-4364516 MS.gene054408:CDS
TCAAATCTAGATATCGAATT+AGG 0.376796 7.4:+4365285 None:intergenic
AAACTGTATGCACGTGTTGC+CGG 0.377886 7.4:-4374900 MS.gene054408:CDS
GTGACCTTCTCCAGCAAGTT+GGG 0.388540 7.4:+4373801 None:intergenic
TCAGCTCCTTAATTCACCTT+GGG 0.388541 7.4:-4370907 MS.gene054408:intron
AAAAGAGTTAGCACTGTTGC+AGG 0.390616 7.4:-4367376 MS.gene054408:CDS
TTTCGGTGTCTGCAACATAA+AGG 0.391925 7.4:+4371951 None:intergenic
GTTACCTGCTTTATACTCCA+TGG 0.392458 7.4:+4375813 None:intergenic
GACGCAGCTAAGAAAATATC+AGG 0.393270 7.4:+4378695 None:intergenic
GCAAAGCCTGATTCTGGAAT+AGG 0.395030 7.4:-4379328 MS.gene054408:CDS
CGAGCTGTTGATCTGAAAAC+TGG 0.395223 7.4:-4368842 MS.gene054408:CDS
CACATTATCAGATGAAGCTT+TGG 0.396438 7.4:-4378010 MS.gene054408:CDS
TTAGAGAAATGATACTCATT+TGG 0.399558 7.4:+4365092 None:intergenic
GGCTGGTCAACATCAGATTT+GGG 0.402391 7.4:-4370841 MS.gene054408:CDS
GTTTCCTTCCTCTGATGAAA+TGG 0.405938 7.4:+4365136 None:intergenic
AAATGAGTATCATTTCTCTA+AGG 0.407509 7.4:-4365090 MS.gene054408:intron
ACATCCTTTGCACAACCTTC+TGG 0.408088 7.4:-4369015 MS.gene054408:CDS
ATGATGGAGACATGTACTTT+TGG 0.409962 7.4:-4373888 MS.gene054408:CDS
GCCTCTGTTAAGGGAGTTGA+AGG 0.412303 7.4:-4379493 MS.gene054408:CDS
GGAAAATGCTCAGCTTGTTC+CGG 0.413307 7.4:-4375112 MS.gene054408:CDS
TTCAGCTCCTTAATTCACCT+TGG 0.413650 7.4:-4370908 MS.gene054408:intron
TTGCAGCTTTCTGAACCATC+TGG 0.415730 7.4:-4366570 MS.gene054408:intron
CTTCCAGTTATTTACGGTAA+AGG 0.416867 7.4:+4376019 None:intergenic
CGGCGAGATATACTGCGATA+TGG 0.417596 7.4:-4376071 MS.gene054408:CDS
GTTAGCACTGTTGCAGGAAC+AGG 0.418618 7.4:-4367370 MS.gene054408:CDS
GTGCTTGCGGGAGGAGTAGA+TGG 0.420611 7.4:-4377250 MS.gene054408:CDS
CCTTTGTAGGTTGTCAATGA+TGG 0.421594 7.4:-4373904 MS.gene054408:intron
TGGGCAGGTTGCAGGGTTCA+CGG 0.425732 7.4:-4376091 MS.gene054408:intron
CAAGAACTTTCAAACGTCTT+CGG 0.427605 7.4:-4365199 MS.gene054408:CDS
TGGTGGTGATTCCATCTTCT+CGG 0.428707 7.4:-4368801 MS.gene054408:CDS
GGAAATTAGGCATAAATTCA+TGG 0.433212 7.4:-4373864 MS.gene054408:CDS
ATACTCTAACTCTGCTTCAA+TGG 0.433470 7.4:-4364849 MS.gene054408:CDS
GGAAATCCTATTCCAGAATC+AGG 0.433726 7.4:+4379322 None:intergenic
TGCCCTTGAACTCATTTCTC+AGG 0.434684 7.4:-4379296 MS.gene054408:intron
CAACAGATTCCAAATAGCTT+GGG 0.435407 7.4:+4375855 None:intergenic
ATCTAGTGCTGATCGTATAA+AGG 0.436152 7.4:-4379150 MS.gene054408:CDS
ACTTCAACGGTGATGTCAAT+AGG 0.436537 7.4:+4372838 None:intergenic
TTTGTTCCGTTCATGGGAAC+TGG 0.438002 7.4:-4380326 MS.gene054408:intron
CAGGTGGTCACCAACCTTGA+TGG 0.438097 7.4:-4372218 MS.gene054408:CDS
GATGAGGAAACTCCCTCAAC+TGG 0.438708 7.4:-4377202 MS.gene054408:CDS
GTTGCCGGACCTAGATGCTT+TGG 0.439053 7.4:-4374885 MS.gene054408:CDS
TTCTCCAAAGCATCTAGGTC+CGG 0.444068 7.4:+4374881 None:intergenic
GGCTATGAAAGAAATTTAAA+CGG 0.444425 7.4:-4370774 MS.gene054408:CDS
GTAAAATAAAATTCCCATCA+AGG 0.450783 7.4:+4372204 None:intergenic
TGAATTTGAACTTCGTACCT+TGG 0.451826 7.4:-4365255 MS.gene054408:CDS
GAACCATCTGGAATTGTTGA+AGG 0.452001 7.4:-4366558 MS.gene054408:CDS
TACTCTAACTCTGCTTCAAT+GGG 0.455668 7.4:-4364848 MS.gene054408:CDS
TGTGAACTACATAGCTGATC+TGG 0.455967 7.4:-4375395 MS.gene054408:CDS
TTGCTGCAAAATCACAAGAA+TGG 0.459753 7.4:-4380469 MS.gene054408:CDS
AATATTTATATTGCCATGGC+TGG 0.461723 7.4:-4370858 MS.gene054408:CDS
CAGCTCCGCTTCAGTTTCGC+AGG 0.461808 7.4:-4375059 MS.gene054408:CDS
TTACCTGCTTTATACTCCAT+GGG 0.462328 7.4:+4375814 None:intergenic
TCAACACCAGCTCTTCTAGA+AGG 0.463790 7.4:+4380389 None:intergenic
CGTTATATCATATACCTCAC+TGG 0.464098 7.4:+4378652 None:intergenic
GCGACCAACCTGAGCTGTTA+CGG 0.464305 7.4:+4367321 None:intergenic
ATACTGCGATATGGAAGTCT+TGG 0.464950 7.4:-4376062 MS.gene054408:CDS
CAGGCAACTCAAGATCTGAT+AGG 0.466719 7.4:-4375429 MS.gene054408:CDS
TGCGTACGCTTGCTGGAAAT+GGG 0.467276 7.4:-4371144 MS.gene054408:CDS
TTTGGTGATCAAGATGGAAT+AGG 0.469149 7.4:-4368282 MS.gene054408:CDS
TGGAAATTCCGTAACAGCTC+AGG 0.475022 7.4:-4367329 MS.gene054408:intron
TTGGGCAAGGAGCTTACCAT+TGG 0.475782 7.4:+4373819 None:intergenic
GTCTTCATCTGATGTGCTTG+CGG 0.479613 7.4:-4377263 MS.gene054408:CDS
AAACAAATTATCCGAGAAGA+TGG 0.485529 7.4:+4368790 None:intergenic
GCTATTTGGAATCTGTTGTT+CGG 0.488411 7.4:-4375850 MS.gene054408:CDS
AAAGAAATTTAAACGGATCA+AGG 0.488545 7.4:-4370767 MS.gene054408:intron
GGAGGATCTCGTTTGCTAGC+TGG 0.488849 7.4:-4368821 MS.gene054408:CDS
TGTGACCTTCTCCAGCAAGT+TGG 0.489428 7.4:+4373800 None:intergenic
GATTATATTGGAGGACGAAA+AGG 0.491443 7.4:-4371109 MS.gene054408:CDS
ATGTCATCTCGGATAAAAGT+TGG 0.492160 7.4:+4377976 None:intergenic
ACAAGAGCATTTAGTGGTGA+TGG 0.493714 7.4:-4370795 MS.gene054408:CDS
GCAGTCTTGTTTGATATGGA+TGG 0.493899 7.4:-4380434 MS.gene054408:CDS
CTCTGATGAAATGGCGTCAA+CGG 0.496804 7.4:+4365145 None:intergenic
CTATGTAGTTCACAAATTGC+GGG 0.496956 7.4:+4375404 None:intergenic
TAAGGATCTTGATGATTTCG+TGG 0.497481 7.4:-4372946 MS.gene054408:intron
TTTGACAGTGTAAAAGCAAA+GGG 0.500128 7.4:-4379190 MS.gene054408:intron
GGGGAGGAAGGTTTGCAAGA+TGG 0.500129 7.4:-4372167 MS.gene054408:CDS
TGGGCAAGGAGCTTACCATT+GGG 0.501381 7.4:+4373820 None:intergenic
TACTGCGATATGGAAGTCTT+GGG 0.502130 7.4:-4376061 MS.gene054408:CDS
GGAGTTACAAGAGCATTTAG+TGG 0.505239 7.4:-4370801 MS.gene054408:CDS
TTTATACTCCATGGGTGGCT+GGG 0.505614 7.4:+4375822 None:intergenic
GTTATAGAAGATGCGCTAGC+TGG 0.505695 7.4:-4378228 MS.gene054408:CDS
ACAACAGATTCCAAATAGCT+TGG 0.507408 7.4:+4375854 None:intergenic
AGAAAATATTTATATTGCCA+TGG 0.509264 7.4:-4370862 MS.gene054408:CDS
CTTTCAAACGTCTTCGGAGA+CGG 0.512742 7.4:-4365193 MS.gene054408:CDS
TCCAATATAATCAGAGCCCT+TGG 0.514305 7.4:+4371120 None:intergenic
CTGCCAAAGCTGCACAAATG+AGG 0.518532 7.4:-4378197 MS.gene054408:intron
GATGAAGCTTTGGAGTCTGC+TGG 0.518796 7.4:-4378000 MS.gene054408:CDS
CTGTCTTACCCTCCAGTTGA+GGG 0.520258 7.4:+4377190 None:intergenic
ATTCTCAATGGTGACTCCGT+TGG 0.520285 7.4:-4377931 MS.gene054408:CDS
ATTGGGAGCAGTGGGGAGGA+AGG 0.521702 7.4:-4372179 MS.gene054408:CDS
TCACTTGATGAAATTCTCAA+TGG 0.522031 7.4:-4377943 MS.gene054408:CDS
CTGCAGTTTGGTGATCAAGA+TGG 0.523474 7.4:-4368288 MS.gene054408:intron
AAGGGCTCTGATTATATTGG+AGG 0.523970 7.4:-4371118 MS.gene054408:CDS
CGGTGTCACCCAGCCACCCA+TGG 0.524903 7.4:-4375830 MS.gene054408:CDS
AGGTGGTCACCAACCTTGAT+GGG 0.525804 7.4:-4372217 MS.gene054408:CDS
ATACCTGAGAAATGAGTTCA+AGG 0.526854 7.4:+4379293 None:intergenic
GTTGATGTCTTCGCCGAGAT+CGG 0.529311 7.4:-4380371 MS.gene054408:CDS
TGTCATCTCGGATAAAAGTT+GGG 0.529776 7.4:+4377977 None:intergenic
CTTGCCCAACTTGCTGGAGA+AGG 0.529836 7.4:-4373805 MS.gene054408:CDS
GTTGCAGGAACAGGAAAAGC+TGG 0.530145 7.4:-4367361 MS.gene054408:CDS
GAAGAACCTTCTAGAAGAGC+TGG 0.531004 7.4:-4380395 MS.gene054408:CDS
CATTGCAGAGAAGAAGATGC+AGG 0.532548 7.4:-4377314 MS.gene054408:intron
GAAATGAGTTCAAGGGCACC+TGG 0.538905 7.4:+4379301 None:intergenic
CTCCCTTCAACAATTCCAGA+TGG 0.539826 7.4:+4366555 None:intergenic
ACACCGAAAACCATGCTTTG+AGG 0.540508 7.4:-4371937 MS.gene054408:intron
TTTGCTATCATTGGCCCCAA+TGG 0.541547 7.4:-4373835 MS.gene054408:CDS
TTTGCAGATTTACTATTGCA+AGG 0.543329 7.4:-4364555 MS.gene054408:intron
TACTTCTTCAACATCCACTA+GGG 0.543728 7.4:-4368251 MS.gene054408:CDS
TAATTTGTGGGCAGGTTGCA+GGG 0.544516 7.4:-4376098 MS.gene054408:intron
AATAAAATTCCCATCAAGGT+TGG 0.546000 7.4:+4372208 None:intergenic
ATTGGTATTGTGTCAGCTGT+TGG 0.546760 7.4:+4365170 None:intergenic
GATGCAAATCTAGCTGCCGC+TGG 0.548047 7.4:-4379125 MS.gene054408:CDS
GGTGACATGAACACCGATCT+CGG 0.552364 7.4:+4380358 None:intergenic
GCTATGTAGTTCACAAATTG+CGG 0.554198 7.4:+4375403 None:intergenic
AATCTGATGTTGACCAGCCA+TGG 0.554563 7.4:+4370845 None:intergenic
ATTAAAGGTGGCTTCATCAA+AGG 0.555617 7.4:+4372142 None:intergenic
AATGGGAAGAATTAGTTGCA+AGG 0.558118 7.4:-4364831 MS.gene054408:intron
GCTAAGAAAATATCAGGAGC+AGG 0.560650 7.4:+4378701 None:intergenic
TTTGCAGATGCATAGCTGTA+CGG 0.561772 7.4:-4378035 MS.gene054408:intron
ACATAGCTGATCTGGAGAGC+AGG 0.563538 7.4:-4375387 MS.gene054408:intron
CTTTGAAATATATCTGGACA+AGG 0.564662 7.4:-4379440 MS.gene054408:intron
TTAATTTGGCAGGATCTGAA+AGG 0.567281 7.4:-4374962 MS.gene054408:intron
TTCACAGCAAGTCGTCTCAT+CGG 0.567450 7.4:+4380524 None:intergenic
GCGGGAGGAGTAGATGGAGT+TGG 0.569157 7.4:-4377244 MS.gene054408:CDS
CTGAAATCCTTTAAGCTCCA+AGG 0.569426 7.4:+4365238 None:intergenic
GCGTAGAACCGCATTGCGGA+TGG 0.570655 7.4:+4374519 None:intergenic
TTAAGCCAATCAAGTTTAGA+CGG 0.571747 7.4:+4375084 None:intergenic
TTTGAGGTCCCCTTCCGAGA+GGG 0.572222 7.4:-4364500 MS.gene054408:CDS
CCACCCATGGAGTATAAAGC+AGG 0.576140 7.4:-4375817 MS.gene054408:intron
CAAAGCTTCATCTGATAATG+TGG 0.576474 7.4:+4378011 None:intergenic
CTTCTCCAGCAAGTTGGGCA+AGG 0.578136 7.4:+4373806 None:intergenic
GATGGACTGCTTAGTCCAGA+AGG 0.579118 7.4:-4364896 MS.gene054408:CDS
AGCCACCTTTAATCGCCCTC+AGG 0.579887 7.4:-4372132 MS.gene054408:intron
GTACTTCTTCAACATCCACT+AGG 0.580216 7.4:-4368252 MS.gene054408:CDS
GGGGTTGTGTGTGGAAAGGA+TGG 0.580280 7.4:-4368231 MS.gene054408:CDS
CGTTGACGCCATTTCATCAG+AGG 0.581890 7.4:-4365144 MS.gene054408:CDS
AGTTTCCTCATCGGTGACAC+TGG 0.583146 7.4:+4377213 None:intergenic
TTACTATTGCAAGGAAGATG+AGG 0.584554 7.4:-4364546 MS.gene054408:CDS
TACCTACCAGTTCCCATGAA+CGG 0.584984 7.4:+4380320 None:intergenic
GTTTGACAGTGTAAAAGCAA+AGG 0.586314 7.4:-4379191 MS.gene054408:intron
AAACACTTCCTATGTCATCT+CGG 0.587605 7.4:+4377965 None:intergenic
TCTGGTCTTTCACTGTCTCA+AGG 0.589020 7.4:-4368997 MS.gene054408:intron
TCATCTGATGTGCTTGCGGG+AGG 0.589101 7.4:-4377259 MS.gene054408:CDS
AATAGGTTGCAGTAAGCTGT+TGG 0.593052 7.4:+4364415 None:intergenic
GACGCCATTTCATCAGAGGA+AGG 0.593544 7.4:-4365140 MS.gene054408:CDS
TACCTGAGGGCGATTAAAGG+TGG 0.594033 7.4:+4372130 None:intergenic
CTGTCCTGTACCTCAAAGCA+TGG 0.594180 7.4:+4371927 None:intergenic
ATACTGAAGCTGCAAAGAAG+AGG 0.595416 7.4:-4379465 MS.gene054408:CDS
AACAGATTCCAAATAGCTTG+GGG 0.596731 7.4:+4375856 None:intergenic
GTTATATCATATACCTCACT+GGG 0.598357 7.4:+4378653 None:intergenic
AGCTTTCCAGGAAACTTCAA+CGG 0.599712 7.4:+4372825 None:intergenic
TGGGAGCACAATATATTGAG+TGG 0.601024 7.4:-4370822 MS.gene054408:CDS
AGTTATTTACGGTAAAGGCA+AGG 0.602071 7.4:+4376024 None:intergenic
AACCATCTGGAATTGTTGAA+GGG 0.603613 7.4:-4366557 MS.gene054408:CDS
GGATGGCATAATCTATATCA+CGG 0.604260 7.4:-4368214 MS.gene054408:CDS
CAGATTCCAAATAGCTTGGG+GGG 0.604289 7.4:+4375858 None:intergenic
ACTGTCTTACCCTCCAGTTG+AGG 0.606876 7.4:+4377189 None:intergenic
TTATGGAAAACAGAACATGC+TGG 0.607413 7.4:-4372907 MS.gene054408:CDS
AACGGTGATGTCAATAGGCG+AGG 0.608281 7.4:+4372843 None:intergenic
CTTTACCGTAAATAACTGGA+AGG 0.611149 7.4:-4376018 MS.gene054408:intron
CCTGCTTTATACTCCATGGG+TGG 0.614206 7.4:+4375817 None:intergenic
CTTGCTGGAAATGGGACCAA+GGG 0.614260 7.4:-4371136 MS.gene054408:CDS
GGATGAAAACAGACATCCCA+AGG 0.615951 7.4:+4370891 None:intergenic
AGTACCCTGCGAAACTGAAG+CGG 0.617207 7.4:+4375054 None:intergenic
TACCTGAGAAATGAGTTCAA+GGG 0.617449 7.4:+4379294 None:intergenic
GGTTGCAGTAAGCTGTTGGT+CGG 0.618227 7.4:+4364419 None:intergenic
ATGTTAACTTACATTGACAA+TGG 0.627047 7.4:+4379098 None:intergenic
AGTTGAGGGAGTTTCCTCAT+CGG 0.629408 7.4:+4377204 None:intergenic
CACGGATAGCTACAATCACA+AGG 0.630926 7.4:-4368196 MS.gene054408:intron
GCTGTTGATCTGAAAACTGG+AGG 0.630976 7.4:-4368839 MS.gene054408:CDS
GGGCAAGGAGCTTACCATTG+GGG 0.632152 7.4:+4373821 None:intergenic
TGCTGGAGAAGGTCACAAGA+AGG 0.632317 7.4:-4373794 MS.gene054408:intron
TTTCCACACACAACCCCTAG+TGG 0.632321 7.4:+4368237 None:intergenic
AGCTCCGCTTCAGTTTCGCA+GGG 0.634708 7.4:-4375058 MS.gene054408:intron
GGAATTGTTGAAGGGAGCAA+CGG 0.642052 7.4:-4366549 MS.gene054408:intron
ATTGCAGAGAAGAAGATGCA+GGG 0.644100 7.4:-4377313 MS.gene054408:intron
ACAAATTGGGAGCAGTGGGG+AGG 0.645632 7.4:-4372183 MS.gene054408:CDS
AGGAAACTCCCTCAACTGGA+GGG 0.646451 7.4:-4377198 MS.gene054408:intron
GAGGAAACTCCCTCAACTGG+AGG 0.646514 7.4:-4377199 MS.gene054408:CDS
GGACTAAGCAGTCCATCTAG+AGG 0.647221 7.4:+4364902 None:intergenic
GCTTGCTGGAAATGGGACCA+AGG 0.647884 7.4:-4371137 MS.gene054408:CDS
GTTTGAGGTCCCCTTCCGAG+AGG 0.652879 7.4:-4364501 MS.gene054408:CDS
TGAGACAGTGAAAGACCAGA+AGG 0.653112 7.4:+4369000 None:intergenic
CATCCACTAGGGGTTGTGTG+TGG 0.653615 7.4:-4368240 MS.gene054408:CDS
AGACTACATACTATATCCAA+CGG 0.657267 7.4:+4377915 None:intergenic
TATCATATACCTCACTGGGG+GGG 0.657276 7.4:+4378657 None:intergenic
GAAGGGGACCTCAAACAGCA+AGG 0.663016 7.4:+4364508 None:intergenic
CATAGCGTAGAACCGCATTG+CGG 0.663396 7.4:+4374515 None:intergenic
ACTTCTTCAACATCCACTAG+GGG 0.670361 7.4:-4368250 MS.gene054408:CDS
GAACGGAACAAAATCGTCGA+CGG 0.671642 7.4:+4380337 None:intergenic
AGGACGAAAAGGAGACACTC+AGG 0.673775 7.4:-4371098 MS.gene054408:intron
GGATCTCGTTTGCTAGCTGG+TGG 0.674323 7.4:-4368818 MS.gene054408:CDS
ATATCATATACCTCACTGGG+GGG 0.675769 7.4:+4378656 None:intergenic
AACTACCAGTGTCACCGATG+AGG 0.676041 7.4:-4377218 MS.gene054408:CDS
ACTAGGGGTTGTGTGTGGAA+AGG 0.678812 7.4:-4368235 MS.gene054408:CDS
ACAGATTCCAAATAGCTTGG+GGG 0.682419 7.4:+4375857 None:intergenic
TCCTTCAACTCCCTTAACAG+AGG 0.684080 7.4:+4379492 None:intergenic
GCTGCAAAATCACAAGAATG+GGG 0.685213 7.4:-4380467 MS.gene054408:CDS
CTCTGAAGCCATCCGCAATG+CGG 0.685669 7.4:-4374527 MS.gene054408:CDS
AAGACCAGAAGGTTGTGCAA+AGG 0.686543 7.4:+4369011 None:intergenic
ACCTGGTTTAACGTGCTACG+GGG 0.686808 7.4:+4364391 None:intergenic
TATATCATATACCTCACTGG+GGG 0.696224 7.4:+4378655 None:intergenic
GGGCCAATGATAGCAAACGT+TGG 0.697969 7.4:+4373841 None:intergenic
GGATCTTGATGATTTCGTGG+CGG 0.703870 7.4:-4372943 MS.gene054408:CDS
CATTGACAATGGCAAACCAG+CGG 0.716232 7.4:+4379109 None:intergenic
TTTACAAATTGGGAGCAGTG+GGG 0.716694 7.4:-4372186 MS.gene054408:CDS
TTATATCATATACCTCACTG+GGG 0.764533 7.4:+4378654 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.4 gene 4364406 4380543 4364406 ID=MS.gene054408
chr7.4 mRNA 4364406 4380543 4364406 ID=MS.gene054408.t1;Parent=MS.gene054408
chr7.4 exon 4380327 4380543 4380327 ID=MS.gene054408.t1.exon1;Parent=MS.gene054408.t1
chr7.4 CDS 4380327 4380543 4380327 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4379441 4379541 4379441 ID=MS.gene054408.t1.exon2;Parent=MS.gene054408.t1
chr7.4 CDS 4379441 4379541 4379441 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4379297 4379353 4379297 ID=MS.gene054408.t1.exon3;Parent=MS.gene054408.t1
chr7.4 CDS 4379297 4379353 4379297 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4379110 4379204 4379110 ID=MS.gene054408.t1.exon4;Parent=MS.gene054408.t1
chr7.4 CDS 4379110 4379204 4379110 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4378667 4378766 4378667 ID=MS.gene054408.t1.exon5;Parent=MS.gene054408.t1
chr7.4 CDS 4378667 4378766 4378667 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4378198 4378256 4378198 ID=MS.gene054408.t1.exon6;Parent=MS.gene054408.t1
chr7.4 CDS 4378198 4378256 4378198 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4377926 4378050 4377926 ID=MS.gene054408.t1.exon7;Parent=MS.gene054408.t1
chr7.4 CDS 4377926 4378050 4377926 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4377199 4377328 4377199 ID=MS.gene054408.t1.exon8;Parent=MS.gene054408.t1
chr7.4 CDS 4377199 4377328 4377199 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4376019 4376106 4376019 ID=MS.gene054408.t1.exon9;Parent=MS.gene054408.t1
chr7.4 CDS 4376019 4376106 4376019 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4375818 4375896 4375818 ID=MS.gene054408.t1.exon10;Parent=MS.gene054408.t1
chr7.4 CDS 4375818 4375896 4375818 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4375388 4375448 4375388 ID=MS.gene054408.t1.exon11;Parent=MS.gene054408.t1
chr7.4 CDS 4375388 4375448 4375388 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4375059 4375134 4375059 ID=MS.gene054408.t1.exon12;Parent=MS.gene054408.t1
chr7.4 CDS 4375059 4375134 4375059 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4374862 4374972 4374862 ID=MS.gene054408.t1.exon13;Parent=MS.gene054408.t1
chr7.4 CDS 4374862 4374972 4374862 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4374501 4374596 4374501 ID=MS.gene054408.t1.exon14;Parent=MS.gene054408.t1
chr7.4 CDS 4374501 4374596 4374501 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4373795 4373917 4373795 ID=MS.gene054408.t1.exon15;Parent=MS.gene054408.t1
chr7.4 CDS 4373795 4373917 4373795 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4372767 4372964 4372767 ID=MS.gene054408.t1.exon16;Parent=MS.gene054408.t1
chr7.4 CDS 4372767 4372964 4372767 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4372133 4372237 4372133 ID=MS.gene054408.t1.exon17;Parent=MS.gene054408.t1
chr7.4 CDS 4372133 4372237 4372133 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4371938 4372002 4371938 ID=MS.gene054408.t1.exon18;Parent=MS.gene054408.t1
chr7.4 CDS 4371938 4372002 4371938 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4371099 4371192 4371099 ID=MS.gene054408.t1.exon19;Parent=MS.gene054408.t1
chr7.4 CDS 4371099 4371192 4371099 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4370768 4370925 4370768 ID=MS.gene054408.t1.exon20;Parent=MS.gene054408.t1
chr7.4 CDS 4370768 4370925 4370768 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4368998 4369047 4368998 ID=MS.gene054408.t1.exon21;Parent=MS.gene054408.t1
chr7.4 CDS 4368998 4369047 4368998 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4368787 4368908 4368787 ID=MS.gene054408.t1.exon22;Parent=MS.gene054408.t1
chr7.4 CDS 4368787 4368908 4368787 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4368197 4368304 4368197 ID=MS.gene054408.t1.exon23;Parent=MS.gene054408.t1
chr7.4 CDS 4368197 4368304 4368197 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4367330 4367422 4367330 ID=MS.gene054408.t1.exon24;Parent=MS.gene054408.t1
chr7.4 CDS 4367330 4367422 4367330 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4366550 4366586 4366550 ID=MS.gene054408.t1.exon25;Parent=MS.gene054408.t1
chr7.4 CDS 4366550 4366586 4366550 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4365091 4365338 4365091 ID=MS.gene054408.t1.exon26;Parent=MS.gene054408.t1
chr7.4 CDS 4365091 4365338 4365091 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4364832 4364981 4364832 ID=MS.gene054408.t1.exon27;Parent=MS.gene054408.t1
chr7.4 CDS 4364832 4364981 4364832 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
chr7.4 exon 4364406 4364570 4364406 ID=MS.gene054408.t1.exon28;Parent=MS.gene054408.t1
chr7.4 CDS 4364406 4364570 4364406 ID=cds.MS.gene054408.t1;Parent=MS.gene054408.t1
Gene Sequence

>MS.gene054408

ATGAGACGACTTGCTGTGAAAGCTTGCGCGATTAACCTTGAAGAAAAGAGCGTTGCTGCAAAATCACAAGAATGGGGAAAAGTTTCTGCAGTCTTGTTTGATATGGATGGTGTTCTCTGCAACAGTGAAGAACCTTCTAGAAGAGCTGGTGTTGATGTCTTCGCCGAGATCGGTGTTCATGTCACCGTCGACGATTTTGTTCCGTTCATGGGAACTGGTAGGTACACTTCATATTCAACACTTGTTCAAAGAAATTAATAATTACTTAGGTTCAGAGATATTAGTTAACACGAACCATTACATTAAATTAAATGTGCTAGCATTTACTAATATCATGAAACCAGATAAAAACGGTTATCATGTAGTAATTCTATTTCATTAAATGTGGTATAGTAGATGTAACAAGAAGTGTGAATGATTGTGTTGATCGATTTATCTGATCTTATCTACCGACATAAGTTTTGTAAGATTGTTTGGGAGAACTTCTGATTACAACTTATGACATTGTTCATAAGCTGTTTTTAGCTTAGTTTCATAAGTTCTTAAAGATAAATAATGAAAACAGTTTATAGCTTATACAAAAACAATTTAGCTTTATTTTATCTTTTACTATAAGCTATAAGTAAGTTGTTTATCCAAACAGGATGGTCTTACCACTTTGTTTGCGTTTATCTAATTTTGTTATGTTTGAACTTACTTTTTTGAGCTTATCTACCGTCATAAACTCTTGTGATATTGTTTGGGATAGATTATGAAAACAGCTTATGACATGTCAATAAAATGTTTTCAGCTTATTTTCATAAGCTCTTCAGGATAGCTTATGAAAACAACTCATAGCTTATATGAAAACTATTTGTCTTTATTTTACCTTTTCTTATTGAAATATCTTATAGATAAGCACCTATGCTATCAACGCTTAATTAAGCTATATATTAATTTATTGAGTTGCTTATTTGATTATTAAGCTTATAATATTTCATTGCTTCATTTTAAACATGTAAGGAGAAGCTAACTTTTTGGGAGGTGTGGCCTCTGTTAAGGGAGTTGAAGGATTCAATACTGAAGCTGCAAAGAAGAGGTTCTTTGAAATATATCTGGACAAGGTATAAGGTGTATATTTCGCTTGATGCTACTTTTGATTTCTTTTACTCTATTTTGCCTAAATACTAAAGTGTTTTCATTTATTTCAGTATGCAAAGCCTGATTCTGGAATAGGATTTCCAGGTGCCCTTGAACTCATTTCTCAGGTATGTAAGATTTATCATGATCTGATTACCTTGCTGATTCATGGAGGGATTAATATAGTAATATAGGGGATGCTGGCATTTGAGTTTGACAGTGTAAAAGCAAAGGGCTTAAAGTCGCTGTTGCATCTAGTGCTGATCGTATAAAGGTTGATGCAAATCTAGCTGCCGCTGGTTTGCCATTGTCAATGTAAGTTAACATTCTGAGTGACTTGTTGAATGTGCCTGAAGATATGGACCTTTAATTGTTATTGATAATATGTACTATATATTATTGGCATTTTCTTCTGAAATTTTTTATGCAATTTCTTCATTTAATTATGACCACACCGAGACATTAAAACAAAATAATCCAAGACGAGTTGTAAGTCCGCTGCATATTATATACTAAACTGTTAGATGTTTATTTTAAATTAAGTGCAAACAGCACCTATTACATTTTATGCCTGGCTTCATAAGATTGACTTCAACTGTAATCTGTTGTCTATCAAGGTTGTTAAAATTACGCAGTTGTATTTTTTTTTTTTTATCAGGTTCGATGCAATAGTTTCTGCAGATGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTCTTAGCTGCGTCAAGGATATTGAATGTCCCCCCCAGTGAGGTATATGATATAACGATACTAGACTGAGCATGTGAGAGGGCTAAGTTGTAATTTTTAGGTGATTGACTTTGTAGAGTAGCAATGTTTTATTGTTGTTGGTTATTTAGGTTAACAGCAACATGTAGATAATAATTGACAAGCATGCACGTAAAAAATTTCTTGAATGTTTGCTAGTGCTACTATGCAGAAAGTTGACTTGAATTTCTTTCATGTTAACCTAAAACCATTTCTGCTTCTCTAACTATATATGGCAATGCATCTGGATTATGTAATAACTTATGGGAGACTCCGAGTTTAATTCACCCAGTCCCATAAGTAACTTATCATGCCCACTTTGAATTTCTTATACAAAAGAACTGTTGCATTTCCACTTAAATGTCACAAAGTGATCTCCTTATATGTTGTCCCAGTGTATTGTTATAGAAGATGCGCTAGCTGGAGTGCAAGCTGCCAAAGCTGCACAAATGAGGTAAGCACTGGTGAAAAATGGATTTATAATGGCTGCTTGAACTTACCAACCCTGACTAATTTCTAAACTCTAAAATGACTTTTTGTTTATGGACTATTGAGAATAGAAATAAAAAAATATGTATGCTTTCAATCTTATTATTTGCAGATGCATAGCTGTACGGACCACATTATCAGATGAAGCTTTGGAGTCTGCTGGCCCAACTTTTATCCGAGATGACATAGGAAGTGTTTCACTTGATGAAATTCTCAATGGTGACTCCGTTGGATATAGTATGTAGTCTTGGGAGTTTGTTGTAAATCTATCATTTTCTTTTAAATTTTCTTTGTTGTCTTTGATGTAAAATGTTAAACTATATTGTTGTTTAAATAAAAAACTATGAGCAATGGGTACTCTGGGTATTACAAATCCTTCTCCCTTATTGCAATGTATGCCTTCTTACTTGATACTTCACATTATATTTTAGTTTCTTTAATAAAGTATACTCCCACTTGACTCACGTATAACGGTATAAGCAAAAAAAAGTCATGTTTGGTGAACCCGAATATAAGGAAATTCCAACTAACTTCACGATATTGAATTCCAAAATTACCCTTCAATTAATGTTCTTATGAAACAAGTTTCCATAGTAAATTAAATCAAGCGAGATAGTTGTTTGGGGCATACAACTTTTTTATTACATCAAGAAAGTTATATGAGATTAACTAATATCATTAATTAGTGTGTATTTGGTTACTTTTGTTTATATTTGAGTCCAGAGGGAGTACCTTTTATTCAGAATAGTTATTTACCTGACAATTGTTGTTTGATAATGCTCTAGAGTACATATATTATGTTGCATGAGGTCTTATCTAGAAATGCCATTGCAGAGAAGAAGATGCAGGGCTCCGAAAATCCAATTAATTTTGCTCAGTCTTCATCTGATGTGCTTGCGGGAGGAGTAGATGGAGTTGGAAGAACTACCAGTGTCACCGATGAGGAAACTCCCTCAACTGGAGGGTAAGACAGTTTTTTGTTGTCTACCTTTTTCTTTTCATTCTATCTTCTGAAATCTAAACATTTTCTTGAATTACGGGTTTTAAGGTAAGCAATCTTAGGATGATTGTCATTGCTTTTTAATCAACTATTTTGGTGTTGGCAATGCATACATAAATACTAGCAGATAATCGAAGCTTAGCTTGCAAAGTTACAACATTAGTTCAACTAACTTTTTTGAGGGTTTATGTTTAACTTGGTCCTCTTCTTTTAAATTATCATGCCAGAACTCATTGACCATTCAAAAGGAAAATGTTGCTAATAATGTGCCGGCATTTGGTGCATAATTAGAAAATTGAGTTCACTTTTCCCTTGAATGTAATAACAGGGATTGGTTAAGACAATTTGGAGTTTAGTCCCTGAACTGAACTGGGATTGGCTTTTAATATATATTTTTCACATTTTAAAAAAGAGATAATATTACGAAATATATAAAAGTCTAAGGTTTACTATTTGGGAAGGAGGAAACAAGTTGTCATGAAATAGTAGTGTTATGCAGTGCTCTCACCACCCTTATTTGATAGGGAAATTACACACACCTCCACTCAGTTCTGTATAAATGGCACACACACCCCTCCTTTACTTTTACATATCAGGTGATATGTATATAACAGAGGGGAACTCAATATCTGTGTCACTGCCATTTAAACACACCTCAGATGAGTGCAATTCCTCCTTTTTAATTGAGTTGAATTTTAAAAAAAAAATAATATTATATATCACATGCAATATGAAAGAGTGTAAAATATGCTCGGAAGCGATTATTTTATATAAATATTATTTATATAATTATAAAGTTAATATTGTATTTTCATTTTTTATGTTGTTAAAAAAGTGATTAATGAACTACCTATTGGAGAATTCCCATACAAGCTATTTTGACGTTAGTCATGTTATAACAAGTTGATGCCATTCTCCTATTTGATGAATAATTGCTTTTCCATGTATGTAATTTTGTACCATGAAAATATTTATCATTTCAATATTTGGTCCATGCAACATGCAGAGTTTTTGTTGATTTACTATTGTGAGGGTGCAGAAATAATTTGTGGGCAGGTTGCAGGGTTCACGGCGAGATATACTGCGATATGGAAGTCTTGGGATTGCTATCTCTTGCCTTGCCTTTACCGTAAATAACTGGAAGGTACAATAATATTGTAAGAATATGCTGCAAATTATATGTTCTACATCTCTATATTGAACCTTAATTTAATTTTTTTATAAAGAAAGTCGGTCATGTTTAACGAGCTAACTACTATACTACAGGCAATGCAATATACTTCCCCCCAAGCTATTTGGAATCTGTTGTTCGGTGTCACCCAGCCACCCATGGAGTATAAAGCAGGTAACAAACCAATGATGTGCTGGGAAATCAGTCTTCCCTGCTGTTATATACTTCCTGCATTTATCTACTTTCCTATCTTATGGCTGTTTTCTGTTGATGGTGCTATGTATAATTATTAATCTTAAAAGGACTGCTCAATCCAAAACTTTAGCATGTTAGATAACTTTATGGTCATGACAAAAAAAGTCATTCAGAGAACTTAATCTGCTAGGTAGCACAGATGAAACTTTTTTTATACTATAATTAGTGCATAAGTTGAGACTCTGATCAATTATGCTGGTATTGACGCTCTTGGGTTATTTTCATCAATAATTTGGGGTCATGCTTAGAGATGAAATAAGAGTCAGAGTATTTTCCTTTTATTCTCAGGCAACTCAAGATCTGATAGGATCCCGCAATTTGTGAACTACATAGCTGATCTGGAGAGCAGGTAGTACTTTGATACATTTCTTTCTTTATAACTATTTTATGATGATTTTAAGTTTAACCCTATACTCTAGTTTTATAATATTTAACTGTTTTATCGATGTTCTCCAATGATATAGCAAAAAGGGAGTATTTTCTGTTTGTGAGTGTGAAATTATATGTATTACCTCCTCTCTGGAGAGAGAAACAATTGTAGCTTGTAAGCAAGTTGTAATTTGTTATTAAAATACTATGGTAAAATCCTTTTCACTGTTAAGGGAAAATGCTCAGCTTGTTCCGGAATTTCCGTCTAAACTTGATTGGCTTAATACAGCTCCGCTTCAGTTTCGCAGGGTACTTTTATTCTTGCATTCTGTTTTAATTTTAATCTGATGAAAACATCTGTGCTCATTAGATTTGTATTTCTTTTAATTTGGCAGGATCTGAAAGGAAAAGTTGTTCTGCTCGATTTCTGGACTTATTGTTGTATAAACTGTATGCACGTGTTGCCGGACCTAGATGCTTTGGAGAAAAAATACAAAGATATGCCGGTAATTTCATCTATGAATATTTTGATTATCAAATGTAGCTTGATGTGTGGCTCTGCTTTATAAAATGTTGTCATACCTATCAGATGGTACTTTAGTGCATGAACGTCAAATTTTTGTATATTTGTCTTGTTTATTGAATATTCTTCTGTATGAAAAATAATTTAGTTGTCCAGATAACATTTGTGACATAAGTAATGGGTTTATATCATATCCCCCAGCAAAAAGGATTAAAAAATATATTTTGATGTAAGTTTTGTTTCTACAGTTCATTGTTGTTGGTGTTCATTCTGCAAAGTTCGATAATGAAAAAGACTCTGAAGCCATCCGCAATGCGGTTCTACGCTATGACATTACTCACCCAGTAAGCTCAAAGCTACAACTCAACCAATATTTTAAATTGGATTTTTTTTTTCTGGAATTTTTTTACATTTGTAAGTATTTTCAATTTTCCTTCTCTTCGGTTATTGACGAGCACATACACTTTTGGTCAGATGGTTTAGGATAGGAAAGTTATTTTATTCTGTAGTTAGGCTTGGAGGACAATTATATATATATGGTTACACCGAGACAGTTATTTTATCAGGTAGCTAGATAAGAAGACAGTTATGCATGTTTTATATTTTAATTTCTAAATGTATGGGTGTCAGTTATTTTTATTAGTAGGCAGTTTTATGAGTTATGATTGTATGTTTGAGAGAGAACTCTCTGTTAGGGCATAGGCCTGTGACTTGTGTTGCTGAACTCTAAATCTGGTTTAATCCACACCTGCTATCAATGAAACTATCTTATTTATCTGCACAATCTCTCATGGTATAATAGTTATGGAATTTTGTTTGTATGATTGTGTTCTTTACTTTGATTTTTAAATTTATTGACGGTTTAGGGCTCTTGAACCCTTGCTTAATAAACTCTGCTTGATCAGATCTCTTATGCATCCTTTGTAGGTTGTCAATGATGGAGACATGTACTTTTGGCGGAAATTAGGCATAAATTCATGGCCAACGTTTGCTATCATTGGCCCCAATGGTAAGCTCCTTGCCCAACTTGCTGGAGAAGGTCACAAGAAGGTACTGATGACAACCTCTAGTATCATCTGCATGTTTCTTATTTTAAAAATCATTGTGATATTATAAAATTAATTCAAGACTATTCTGGGATTATATGCATTAATTGTCATGTATATTATAGCATTTACACTGTGTTTATATTTTTTTCTAAAAATTTAAAACCAACACTGAGGCATTAGAGATACGGTGTGGATGAAAAGGAACATGCTCCATAGCCATATGATGAAAATTTCCCATTCTCCTAAAAGTGAGCAAGGTTTATGCGCCTACAAAACTGTCTTTGGGAGTGATAATTTTGGGCACATGAAATCATCTTCAACAGAATAATACCCACTACCATATTTGAATTTGTGTTGGACCTAACTCAAAGTTTTCAGGCATATCACATTCAATTCATTGTGGGTCTCTCAAAACCCCCTCATGCTCAAAACTTTTTATCTGGAGCATGACCTGAATGACCATATAGTGGGTGCCCAACAGATCTTTGATAGGCTCATGTCTGGCACATTTCTTATTCACGAAGATATATAAAAGGACTAAACTATATTCATGTGATTATGGTTATTCATGTTTTGATTTTTGTCAACTTAGAAAATAGTTGTTCTTCTTAGAATGTATTTGACAAGTGCATAATAAATATATTTTCAATTTTTGTTGCTTCATTTTTTCTATCTAATTTGATTATAATTTGATTTTTGAATGATGCCCAATTATGTTTTTTGATGCATGTAACCATAAATGATGCCCAATTATGCCATATTCATTGTAGCCATAAATTAGTGTGGTGATTAAATTTAAAACAAGACTTTTATTGTTCCTGTTTTTATAAGGATCTTGATGATTTCGTGGCGGCAGCACTTCAATTTTATGGAAAACAGAACATGCTGGACAATACACCGATTACATTAAATTTAGAGAAAGATAATGATCCTCGCCTATTGACATCACCGTTGAAGTTTCCTGGAAAGCTAGCTATTGATGTCCTCAATAATAGGCTTTTTATTTCTGATAGCAATCACAACCGTATAGTGAGTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCATGATCATGAGCACGTGGTGCATAACTGTACAGGTTTTACCTAATACAATAATGAATTAATTAGGCTATGAAATTTCTAGATTACATCTCATTTTAACTATGTGGAACATGAATGCTGGAATCATTGACCAATAACCAAAATATTCTTATCTGAATTAGATGACTCAAAGAACTCTACCAGCACAAACAATTAATCCTAATCCATAATGGGAAATGAAATCCTGACAGAACTATTAACAATTGATACAATATTCCAAGAGCTGATAAACTAAACACAACTTTCCCGAATTGCTGACAATTCAAACCTGAATTCCCAAACAAAACCAATTTAAATCTAAAGCTCTAAATCCCAAGTTGCCATGTATTATAGTTCTAATTTCATTCACCACACTTCATTTTGACAATACATGCATAATTTATTTTCCTTTTGATTGTAAAAGTAAGTTGCATTTGTTTACGCTGGCCATGTTTGGTATTCAGGTGGTCACCAACCTTGATGGGAATTTTATTTTACAAATTGGGAGCAGTGGGGAGGAAGGTTTGCAAGATGGTTCCTTTGATGAAGCCACCTTTAATCGCCCTCAGGTACAACATAAATAAGATCGCGTTTGAGCTTCCAGTGTACTTCGTTTGTGCCTAATTGTGGCATTCATCATATGAGGATTGCAATCACTTTAACACACTCTATACTTATTTGTGGTTCTTGGTTCTCCAGGGCCTTGCTTATAATGCAAAGAAAAATATCCTTTATGTTGCAGACACCGAAAACCATGCTTTGAGGTACAGGACAGCTTCAATCAGTAGTCTGATTTTCATTGTTGTGATCTATGTGACAGCATAGATGTTTCATTGGTAGGTTTAATTAATCATGGAAAATTTTGCAAGTTCCACATCAACTAGAGCTATGAGCTAGTAGTGCTTAGAGTTTGGACCTTTAAATCTCAGTTTTGTGGGGATGCGTTAGGCCCTAAATCCATATTCTAAGATAAAACAGTTAAGTTTCCTTTTACGTGAACTGTATGCTTTGTCCTGTGAGGCTTCAGGATTTAGTTGGTCCATTCCAACTTCGCACGGGCCTTGGGTCTGGAAGACCTATAGCAGAAGAAATGGAAAAGGGTTGGGTCAAAAATGGGAATAAGATTTAGAGATCCCACACATTTTTTCATTATAGGGAGAAAAAAAAACTAGTAAATTAGTGGCGGAGGAGGGGTAAGTTTTTTTGACATTTTATTAGTTGTGGACAAGGAGCTTTGCTCTGGGGTATTACATATTCCATCTTTTGTAATACATTTTCTTTCTTCAATAATACACCATTTTTGAGTTCCTTATTTTTCTGATCTCTGACATGTTTGTTTCAGAATAAAAATTACTAATTGCCATGTGATTACATCCGTAGAAAGTCAAAAAAATCCTGCTTGATTTGATAAAAGCAGAATTTTGGTGCAGTAGTCATTAACTATGTGACAAGCTGTTCTACATATGAGAAATGGATCAAATCATCAACCTATTTATTTATGTTCTGAAGGGAAATTGATTTTGCTAATGAGAAAGTGCGTACGCTTGCTGGAAATGGGACCAAGGGCTCTGATTATATTGGAGGACGAAAAGGAGACACTCAGGTAATTAAATTAATTTGTAAGTTTTGAGGATGAGTGACATTCGTATACTATATAGCTACAATCTAAGATGGGCCACAATTTTTTTTAATCATGGTCTTTTACATCATATATGATCTCGTTAGGCTCCTTAATGGACCACAAAGTTAAACTCCTCGATTTTCTCCCTTTTTCAGCTCCTTAATTCACCTTGGGATGTCTGTTTTCATCCATCCAAAGAAAATATTTATATTGCCATGGCTGGTCAACATCAGATTTGGGAGCACAATATATTGAGTGGAGTTACAAGAGCATTTAGTGGTGATGGCTATGAAAGAAATTTAAACGGATCAAGGTATCACTTCAAGTGACGATATGCCCAACTGTTGTCAAACTTCATTTACATTTCAAGTGTTCTTTTGTGGAGTGTATTCAGTGACCTTTGACTACCGTGTTGCTCAGGATATATCTTACTATTTTACAATCCTTATGTATATCTATAATGCTATATCATTATCAACACTGACAGATTTGAAATTGAACTCAAAGTATTCAAACCGATGAAAATGCTAGGAATACACTCTCTTTGATGTATTCTTGAATGCATTCTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTCTTTACAAGTCAGCTCATTTTTTTTGAAAAGAGATCAGTTAAAAAATAAACAATTCATAGACTGTTTTCAAGAGTGTGTCAAACAAGCATGTCACCGGTATTCCTTTTTTCACATTCAATTTTATCATGTATTGTCTTTTACTGCTTCTCTTATGCTTCCATGTTTATCTCTGCTCTTGGCTACAGATACTGATTCAACATTTTTCACTGTGATTGTATGATCTTTATTTTAAACATTCCTTATTTTATAGAGGTATCTGGAATGAATCTGAGAGATTGTGTCATGGTTATCAATGCTGACAATGTCATAATTTACTTGCTCTTGAATTTCATTTGATTGTTCTCTAATATGTTGGGGATGTTGGCTTGGCATACTTCTTTTCTTGATGCACTTTCAGTAACTATAGATTTTGAAACTCTCGCTCTAAGGAATTTCTGTTGCTGATCTTAAATATGGCAGTTAATAATGTGATTTAAATAGTTCTCCTTTTCTCTAAATTTCTAAGAAAAATAAAAATGTTGAGTTTAAGCATTACATTTTGAAGTAATAAGATACAAATGTGTTTATTTGTGTTTGGTTGCATTATGGTTTGGAAATAACAAGTCCAGTTTACTCCATGTGTTTTATTTGTTGACTTTTTAACTAGAATATCTGAAAAACTTCTGATTATTTATCTTTATCATTTTTTATTTGAGATAGTTCTACAAGCACATCCTTTGCACAACCTTCTGGTCTTTCACTGTCTCAAGGTAATACATGGTGATACTTCTCTTGAACTTTGATTTAAATCAATTTCCATTCAAACTGATAAATGTTTCACATGATTTTGCATGATAAGATCTAATGGAGATATACGTCGCTGATAGTGAGAGTAGTTCAATTCGAGCTGTTGATCTGAAAACTGGAGGATCTCGTTTGCTAGCTGGTGGTGATTCCATCTTCTCGGATAATTTGTTTAAGGTAGTTTTAATACTATTTGGGAAGCCTTTTTATGCATTTTTTTGCTTCATCTTGTAGTACTATTTTTCTTCTAATAATTAAATTTCGTTATCATTGTCAACAAGAAAACCGTTTGGTACAAGATGGGCTCTATAGCTCAATTTGTACCAATTAAGTCTTGTTATGTATTAGGTCCAAATTAAATCTCTCTTAAAGGATTGAGTTTTCTTTGGTCTCCATCTACCTCTAACTATTGACCATCCTCTATTTGGTCAACCCTCCTTACCTGTGCTTTTATAGGTCTTATCCATGCATGCCATAACCACTTAAGAGGGGATTCAATCATCTTTTTCACAATTGGGGGTTACCCCATTTTTCTCTCTAATAACCAATTTTATCTTGTGTAACTACTCATGAATCATTAAGAATTTGTCATATTTATAACCCTTCTCTTTAGAACTCCTTTTTCCTGATAATGTAACTCTGCTCTCAAACTTCTGCAGTTTGGTGATCAAGATGGAATAGGCTCTGAAGTACTTCTTCAACATCCACTAGGGGTTGTGTGTGGAAAGGATGGCATAATCTATATCACGGATAGCTACAATCACAAGGTAGACAATTCAGACCAAATCACTTTTGGAATCATTATAGCCTTTGCATCTTGTGTATCATTAGAGAGAACATCAATTGATTGTGTCTAGCACGCATACAACCTTACTACTTAAAAGGGGAATTATTTGTTATAATAATCTATATGTTCCTTTTGTCTTTATGTCATTTTCCAACCTGTCATTGTTGAAGTTTCTGAAAATTCTCTCCTCATTCTTATTTATGTATGGTTCTTGTGACATTAAGATTGACTGGTCAACGTGTCAGTTTCTGTTAGGACTCAATATTAAAGGTTTAAACTTTTGTATGTATCAGATACTATAGTTAATTTGCCTTTCAAAAAAACAGGGAAATGCTAACGAGTGCCCCCCGGGCACTCTTTAAGGACCTTAAATGGTAAGTTTTTTTATGAAAATTTGTGTATTCAATTCATTGGTAATTGAAGTATTCGACTTTTTTAAAGAATAATTTTTTAATATCTTGCCCCGGGGGCACTCATTAGCAAGACCAAAAAAAAAAGATATAGCAGTTACCCTTTTCTGTGAAATCTTGCAAAGAACATAATTCTTTTCCCATTTACTTGGTTAGGACTTGTACTGGAAATTTTATTTTTTGCAGTTAGGTTGTCTTCAAACTTGTCTAATGAATGTTTGGATGCATGCATGATACGACCAACTTAGAAAGTAACAAGTTAATTGGACAGCCAGGCCTTAGCTCCAATATTTGCAGTAACTGAGTTTCCTAGTCTTCTTCTCATTTTTGATAATATATTTCAGATCAAGAAGTTAGATCCGACCAGTAAAAGAGTTAGCACTGTTGCAGGAACAGGAAAAGCTGGTTTTGGGGATGGAAATTCCGTAACAGCTCAGGTTGGTCGCCTCTTGCCAAAATCATCTCCACATTGTAAATGTAGGAATTTAAGTTTATATAATCTTTGGAAATGTTGAATCATCTATTCAAGACACTCTGTTGTTGATTCCATTTCACTTTCACATTAGTGCTGTAAGTGTGGAACTATCATTTATTTTAAAGGTAGAACAATATTTATGGGATACTTTTGGTGTTACAAGTTATAGTCCATAGGTTTGCATGGGCACAGGCTGATGAAGCGTTTTAAATGGAAATTCTCTAAAACGGCTTTAAAATTTTCTCTGTTTTGAATATCAGGTGTGCCTCTCTTGTTATCCTTCTTCAAGTTGTTTCATGACCATAGGAATGTGCAAGAGAAGCACTACAGATGCATTCATGTTGTATAACTATAGTTATGTTGATTTGGTTTACTTGCTTTTTTTTGTTCCATTTCCTATTGCTTCCTTCTAGAATATTTCCCCCCTAAAAGGTGGAAGTGGCGAAAGCTATGCTTTTTAAGATTGTAAATCTGACCCAGTCTTATTTCTTGTTCTTATATTTTGGACACCCATTATTTATTTGATAGAAAGCATTCACACATTTGCATGCTACTGTTTTCTCACACATTTGAAGAAATGTTTTGTATGCTCTTAATTTAAATGCTCATGCAAATTAATTTCAACATAACCAAGTAAAACAAATGAAGTCTTGCTTACCTAATAGCCACAGATATATGTTAACATATTTATCAATGTTTTTGCAGCTTTCTGAACCATCTGGAATTGTTGAAGGGAGCAACGGTAATGCTCTTTTTGCTTCAATCTATTTCATTATTTTTAAAATGTTTTCATACTACATCGATCTTGATGAATTTAAGAAAGGATCACATACATATAATACTTGTGTGCGCCGCACACATATGTAGACCACGTGTCTGTTGTGTGTGTTGATACATATAAACACTCACACATGCAGGCACACATATTATAGGCAGACAAATAGACACAAGTAGGTGTGTGTGTGTGTGTGCGCGCGCACGCGCAGGAAGCATATCAAATGAGAGCACCATATTATTATACCGTTTCTTTTACAGTTCATATTATTATGACGCACTTGTTAGAATATAAGAAAATATCTTAACTTTTGTAATATTCATGTATGTATGGTCAAGAATATAGCTCAAAATCATGACTTTAAAATAATCATCTGACTTATAAGTAACTTTTGATCTTGATCATCCATGCAAAACCAAATTGTCAAGATATTCTCTTCTTACGTCTCACAAGATAATCCATTCATCAAACTTGTTTCCTCTAGAATGCCTGTGGCATACATTCTCTGAGAAATGACAATGCCATCCTTGGATTGACCTCTATCCCCAATGACTACGAAGCCTGCCAATATCTTTTGTTTGAAAGTGGTGACAAAGATGTGCTTTATCCCTTTAGAACTACTTGTGATGTAAAAATTGGAAGCAAAACCTGGAACCTTATCCAGAAACACAATTTTTTAATCAAATTCAGTAGCAAGATTGAAAACCCTTAGATTACAGAATTTTTCTTACTCGAGTAAACATATTCCTTAATAAACTATTCTAACAAGATTGCTGAGACCCTAAAACTAGACCACAAATCAAATTACTCAACAATAAACCCTGACACCCCGTTAGAGTCCTACAACTTACACATATCAACTGCAACTGATAAAAGTAAAGAACACGTTCTCTTCTATTGGTTGAAATTTATATGGGTCATACTAAATTTATGTGGGACCCATATAATTTAGTGAGACTCATTTGAATTTCAACCAACAAGGATGAGTGTGTTTGAAAGAGTATGTTGCTAGCGCTCTTCTTGATATAATTGTCATCACAATCTACCTTTTGTCTTACAAGAATACATCTTATACATAGAATTTAGGGATGTTTATTCCTTGATCCAATTATTTGGTCTAAAATGAAATAAATTTGAAGTAAGCTCAGTCTTAGTATTATTGTTTATTCTTTTTACAGGGAGATTATTCATAGCAGATACAAACAACAGCCTAATTCGATATCTAGATTTGAACACGAATGAATTTGAACTTCGTACCTTGGAGCTTAAAGGATTTCAGCCTCCTAAACCAAAATCAAGAACTTTCAAACGTCTTCGGAGACGGCCAACAGCTGACACAATACCAATTACCGTTGACGCCATTTCATCAGAGGAAGGAAACTTATCTATTGATATATCATTACCAAATGAGTATCATTTCTCTAAGGTTCTCATCATTGTCCTCTCTTTCAAGCGCTCACTGTAATTTAATTATTTACATACACATGAGACTATTTCATCGACTGCCACCCTTATTCCCTTAAAATTCCTTGCAGGAGGCTCGCAGTAGATTCAGTGTTGATATTGAACCTGAAGACGCTGTGAATATCAATCCTCTAGATGGACTGCTTAGTCCAGAAGGATCTGCAACACTTCACTTTAAGAGATACTCTAACTCTGCTTCAATGGGAAGAATTAGTTGCAAGGTACGCCACATTATGGAACACAAGACTTGGGTGAATTCTGAACGAAAATAGTCTGCTCCTTCAATGAAAACAAACAAGGACGTTTTAATCAATGTCAAAATATTGATAGCTGCTTTATCCTTTGTTAATTCTGATATAGGAAGTGGCCCCATTCTAGTGAATTTACTCTATTTTGCCATAATTTGACATCCATGTCATATAGGCGGTAAAAAATCCAACAAGAATCATTGAAAAAGTAAACAATGTTTTCGCTCTTTGCAGATTTACTATTGCAAGGAAGATGAGGTTTGTTTATACAAATCCTTGCTGTTTGAGGTCCCCTTCCGAGAGGGAGTTTTTGACACTGCAAAAGCAGACGTCACTCTTGCCCATTTTGTGAAGCCCAAAAGTCCGACCAACAGCTTACTGCAACCTATTTCCCCGTAG

Protein sequence

>MS.gene054408.t1

MRRLAVKACAINLEEKSVAAKSQEWGKVSAVLFDMDGVLCNSEEPSRRAGVDVFAEIGVHVTVDDFVPFMGTGEANFLGGVASVKGVEGFNTEAAKKRFFEIYLDKYAKPDSGIGFPGALELISQCKSKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASRILNVPPSECIVIEDALAGVQAAKAAQMRCIAVRTTLSDEALESAGPTFIRDDIGSVSLDEILNGDSVGYKKKMQGSENPINFAQSSSDVLAGGVDGVGRTTSVTDEETPSTGGLQGSRRDILRYGSLGIAISCLAFTVNNWKAMQYTSPQAIWNLLFGVTQPPMEYKAGNSRSDRIPQFVNYIADLESRENAQLVPEFPSKLDWLNTAPLQFRRDLKGKVVLLDFWTYCCINCMHVLPDLDALEKKYKDMPFIVVGVHSAKFDNEKDSEAIRNAVLRYDITHPVVNDGDMYFWRKLGINSWPTFAIIGPNGKLLAQLAGEGHKKDLDDFVAAALQFYGKQNMLDNTPITLNLEKDNDPRLLTSPLKFPGKLAIDVLNNRLFISDSNHNRIVVTNLDGNFILQIGSSGEEGLQDGSFDEATFNRPQGLAYNAKKNILYVADTENHALREIDFANEKVRTLAGNGTKGSDYIGGRKGDTQLLNSPWDVCFHPSKENIYIAMAGQHQIWEHNILSGVTRAFSGDGYERNLNGSSSTSTSFAQPSGLSLSQDLMEIYVADSESSSIRAVDLKTGGSRLLAGGDSIFSDNLFKFGDQDGIGSEVLLQHPLGVVCGKDGIIYITDSYNHKIKKLDPTSKRVSTVAGTGKAGFGDGNSVTAQLSEPSGIVEGSNGRLFIADTNNSLIRYLDLNTNEFELRTLELKGFQPPKPKSRTFKRLRRRPTADTIPITVDAISSEEGNLSIDISLPNEYHFSKEARSRFSVDIEPEDAVNINPLDGLLSPEGSATLHFKRYSNSASMGRISCKIYYCKEDEVCLYKSLLFEVPFREGVFDTAKADVTLAHFVKPKSPTNSLLQPISP