Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44039.t1 | XP_013469014.1 | 97.6 | 631 | 15 | 0 | 1 | 631 | 1 | 631 | 0.00E+00 | 1137.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44039.t1 | Q8W0Y9 | 57.9 | 604 | 247 | 4 | 32 | 630 | 23 | 624 | 7.4e-179 | 628.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44039.t1 | A0A072VN40 | 97.6 | 631 | 15 | 0 | 1 | 631 | 1 | 631 | 0.0e+00 | 1137.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052863 | MS.gene44039 | 0.800639 | 1.31E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene44039 | MS.gene041504 | PPI |
MS.gene035276 | MS.gene44039 | PPI |
MS.gene036544 | MS.gene44039 | PPI |
MS.gene060354 | MS.gene44039 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44039.t1 | MTR_1g081800 | 97.623 | 631 | 15 | 0 | 1 | 631 | 1 | 631 | 0.0 | 1262 |
MS.gene44039.t1 | MTR_7g113520 | 44.208 | 423 | 207 | 12 | 53 | 460 | 89 | 497 | 1.39e-92 | 301 |
MS.gene44039.t1 | MTR_1g082920 | 43.980 | 407 | 204 | 9 | 66 | 460 | 123 | 517 | 9.20e-91 | 298 |
MS.gene44039.t1 | MTR_5g049620 | 39.636 | 439 | 225 | 11 | 39 | 458 | 327 | 744 | 2.82e-83 | 280 |
MS.gene44039.t1 | MTR_5g031470 | 39.863 | 439 | 224 | 11 | 39 | 458 | 352 | 769 | 5.02e-83 | 282 |
MS.gene44039.t1 | MTR_5g049820 | 39.636 | 439 | 225 | 11 | 39 | 458 | 327 | 744 | 5.01e-82 | 278 |
MS.gene44039.t1 | MTR_2g069950 | 39.408 | 439 | 220 | 10 | 62 | 465 | 314 | 741 | 1.30e-79 | 272 |
MS.gene44039.t1 | MTR_4g081390 | 39.494 | 395 | 221 | 7 | 37 | 414 | 380 | 773 | 6.57e-77 | 261 |
MS.gene44039.t1 | MTR_2g082570 | 37.795 | 381 | 219 | 6 | 51 | 414 | 362 | 741 | 2.85e-73 | 250 |
MS.gene44039.t1 | MTR_8g072430 | 41.547 | 349 | 180 | 8 | 75 | 413 | 862 | 1196 | 1.49e-71 | 251 |
MS.gene44039.t1 | MTR_2g010760 | 38.832 | 394 | 211 | 9 | 36 | 414 | 387 | 765 | 2.06e-71 | 246 |
MS.gene44039.t1 | MTR_7g109130 | 41.292 | 356 | 189 | 7 | 69 | 414 | 80 | 425 | 4.85e-71 | 243 |
MS.gene44039.t1 | MTR_7g109130 | 41.292 | 356 | 189 | 7 | 69 | 414 | 159 | 504 | 9.95e-71 | 244 |
MS.gene44039.t1 | MTR_7g112420 | 39.716 | 423 | 218 | 12 | 49 | 446 | 229 | 639 | 3.54e-70 | 244 |
MS.gene44039.t1 | MTR_1g087880 | 42.978 | 356 | 183 | 8 | 69 | 414 | 377 | 722 | 5.70e-70 | 245 |
MS.gene44039.t1 | MTR_5g025100 | 42.274 | 343 | 186 | 4 | 75 | 413 | 876 | 1210 | 7.06e-70 | 246 |
MS.gene44039.t1 | MTR_7g109130 | 41.292 | 356 | 189 | 7 | 69 | 414 | 381 | 726 | 3.05e-69 | 243 |
MS.gene44039.t1 | MTR_7g109130 | 41.292 | 356 | 192 | 8 | 69 | 414 | 381 | 729 | 3.18e-69 | 243 |
MS.gene44039.t1 | MTR_7g112420 | 38.824 | 425 | 217 | 12 | 47 | 446 | 357 | 763 | 1.38e-67 | 238 |
MS.gene44039.t1 | MTR_4g092140 | 36.292 | 383 | 223 | 6 | 49 | 413 | 278 | 657 | 1.75e-67 | 233 |
MS.gene44039.t1 | MTR_5g096570 | 39.659 | 411 | 199 | 13 | 44 | 428 | 394 | 781 | 3.02e-67 | 239 |
MS.gene44039.t1 | MTR_1g083770 | 40.669 | 359 | 190 | 10 | 69 | 414 | 391 | 739 | 2.24e-65 | 232 |
MS.gene44039.t1 | MTR_8g098230 | 41.779 | 371 | 168 | 12 | 76 | 418 | 471 | 821 | 3.77e-65 | 232 |
MS.gene44039.t1 | MTR_8g098230 | 41.287 | 373 | 175 | 11 | 76 | 418 | 471 | 829 | 3.40e-64 | 229 |
MS.gene44039.t1 | MTR_4g081390 | 38.202 | 356 | 202 | 7 | 37 | 375 | 382 | 736 | 3.60e-64 | 225 |
MS.gene44039.t1 | MTR_3g060900 | 36.629 | 445 | 227 | 16 | 32 | 448 | 379 | 796 | 9.01e-63 | 225 |
MS.gene44039.t1 | MTR_7g091290 | 35.396 | 404 | 232 | 8 | 44 | 428 | 345 | 738 | 2.76e-61 | 221 |
MS.gene44039.t1 | MTR_8g104200 | 37.313 | 402 | 222 | 12 | 76 | 455 | 503 | 896 | 1.46e-56 | 207 |
MS.gene44039.t1 | MTR_7g091290 | 34.988 | 403 | 194 | 10 | 44 | 428 | 342 | 694 | 5.26e-56 | 205 |
MS.gene44039.t1 | MTR_1g067630 | 35.219 | 389 | 213 | 10 | 84 | 441 | 50 | 430 | 9.22e-54 | 199 |
MS.gene44039.t1 | MTR_7g075060 | 34.236 | 406 | 222 | 10 | 85 | 458 | 49 | 441 | 2.19e-53 | 197 |
MS.gene44039.t1 | MTR_5g011500 | 33.663 | 404 | 222 | 10 | 85 | 455 | 54 | 444 | 3.53e-53 | 196 |
MS.gene44039.t1 | MTR_8g471180 | 34.752 | 423 | 234 | 12 | 71 | 473 | 130 | 530 | 7.72e-53 | 196 |
MS.gene44039.t1 | MTR_4g112350 | 36.148 | 379 | 201 | 12 | 89 | 440 | 124 | 488 | 9.26e-51 | 188 |
MS.gene44039.t1 | MTR_2g055910 | 35.181 | 415 | 219 | 16 | 30 | 413 | 1 | 396 | 8.85e-50 | 183 |
MS.gene44039.t1 | MTR_7g105030 | 35.598 | 368 | 209 | 11 | 88 | 430 | 9 | 373 | 1.05e-49 | 186 |
MS.gene44039.t1 | MTR_7g105030 | 35.598 | 368 | 209 | 11 | 88 | 430 | 9 | 373 | 1.05e-49 | 186 |
MS.gene44039.t1 | MTR_1g059730 | 34.877 | 367 | 203 | 10 | 88 | 425 | 13 | 372 | 1.41e-49 | 186 |
MS.gene44039.t1 | MTR_2g096010 | 34.492 | 374 | 214 | 9 | 88 | 437 | 49 | 415 | 3.12e-49 | 185 |
MS.gene44039.t1 | MTR_3g100270 | 35.227 | 352 | 202 | 10 | 84 | 415 | 5 | 350 | 7.20e-49 | 184 |
MS.gene44039.t1 | MTR_4g094882 | 36.043 | 369 | 195 | 13 | 88 | 419 | 12 | 376 | 2.96e-48 | 182 |
MS.gene44039.t1 | MTR_6g084490 | 34.066 | 364 | 202 | 8 | 69 | 414 | 458 | 801 | 5.34e-48 | 181 |
MS.gene44039.t1 | MTR_3g102170 | 34.615 | 390 | 205 | 16 | 89 | 435 | 9 | 391 | 4.26e-47 | 179 |
MS.gene44039.t1 | MTR_1g017540 | 34.242 | 330 | 188 | 6 | 128 | 439 | 46 | 364 | 1.57e-46 | 176 |
MS.gene44039.t1 | MTR_2g087840 | 36.695 | 357 | 182 | 10 | 88 | 416 | 88 | 428 | 2.75e-46 | 177 |
MS.gene44039.t1 | MTR_2g082570 | 34.098 | 305 | 183 | 6 | 51 | 338 | 362 | 665 | 8.08e-46 | 173 |
MS.gene44039.t1 | MTR_1g018940 | 34.367 | 387 | 210 | 15 | 89 | 435 | 9 | 391 | 1.22e-45 | 174 |
MS.gene44039.t1 | MTR_5g066320 | 34.301 | 379 | 210 | 15 | 89 | 438 | 18 | 386 | 2.80e-45 | 174 |
MS.gene44039.t1 | MTR_4g087040 | 34.734 | 357 | 195 | 9 | 85 | 416 | 190 | 533 | 1.69e-44 | 172 |
MS.gene44039.t1 | MTR_1g484960 | 36.486 | 296 | 164 | 5 | 128 | 410 | 39 | 323 | 3.15e-44 | 170 |
MS.gene44039.t1 | MTR_7g061020 | 32.258 | 341 | 200 | 6 | 89 | 413 | 26 | 351 | 6.16e-44 | 167 |
MS.gene44039.t1 | MTR_3g084790 | 34.722 | 360 | 197 | 8 | 89 | 423 | 99 | 445 | 6.87e-44 | 169 |
MS.gene44039.t1 | MTR_8g080910 | 33.426 | 359 | 192 | 8 | 126 | 458 | 89 | 426 | 5.48e-43 | 167 |
MS.gene44039.t1 | MTR_4g071210 | 34.615 | 364 | 213 | 10 | 86 | 437 | 87 | 437 | 5.74e-43 | 166 |
MS.gene44039.t1 | MTR_4g071210 | 34.615 | 364 | 213 | 10 | 86 | 437 | 87 | 437 | 5.85e-43 | 166 |
MS.gene44039.t1 | MTR_4g123730 | 34.969 | 326 | 182 | 6 | 114 | 419 | 177 | 492 | 1.09e-41 | 163 |
MS.gene44039.t1 | MTR_3g117330 | 34.615 | 364 | 209 | 11 | 88 | 437 | 99 | 447 | 1.21e-41 | 162 |
MS.gene44039.t1 | MTR_6g082470 | 31.793 | 368 | 206 | 7 | 128 | 465 | 77 | 429 | 1.24e-39 | 156 |
MS.gene44039.t1 | MTR_6g086735 | 33.431 | 341 | 193 | 10 | 125 | 449 | 162 | 484 | 2.42e-38 | 151 |
MS.gene44039.t1 | MTR_6g086735 | 33.431 | 341 | 193 | 10 | 125 | 449 | 162 | 484 | 2.87e-38 | 150 |
MS.gene44039.t1 | MTR_7g093720 | 33.929 | 336 | 202 | 9 | 86 | 414 | 71 | 393 | 1.52e-37 | 150 |
MS.gene44039.t1 | MTR_4g124650 | 32.544 | 338 | 192 | 7 | 128 | 445 | 188 | 509 | 2.12e-37 | 149 |
MS.gene44039.t1 | MTR_5g094310 | 30.534 | 393 | 217 | 14 | 83 | 444 | 69 | 436 | 7.68e-37 | 148 |
MS.gene44039.t1 | MTR_4g119980 | 34.754 | 305 | 165 | 9 | 125 | 413 | 253 | 539 | 1.09e-36 | 147 |
MS.gene44039.t1 | MTR_2g101990 | 33.529 | 340 | 194 | 8 | 89 | 413 | 186 | 508 | 1.49e-36 | 146 |
MS.gene44039.t1 | MTR_2g436650 | 33.550 | 307 | 168 | 8 | 125 | 413 | 165 | 453 | 3.62e-36 | 145 |
MS.gene44039.t1 | MTR_3g055940 | 31.250 | 384 | 205 | 14 | 89 | 438 | 76 | 434 | 5.53e-36 | 145 |
MS.gene44039.t1 | MTR_2g436650 | 33.550 | 307 | 168 | 8 | 125 | 413 | 245 | 533 | 9.15e-36 | 144 |
MS.gene44039.t1 | MTR_3g113110 | 28.780 | 410 | 231 | 10 | 89 | 455 | 20 | 411 | 4.14e-34 | 139 |
MS.gene44039.t1 | MTR_5g021650 | 29.948 | 384 | 229 | 10 | 89 | 450 | 21 | 386 | 1.40e-33 | 137 |
MS.gene44039.t1 | MTR_8g076190 | 30.462 | 325 | 199 | 7 | 128 | 441 | 68 | 376 | 3.93e-31 | 130 |
MS.gene44039.t1 | MTR_8g076190 | 30.462 | 325 | 199 | 7 | 128 | 441 | 68 | 376 | 4.06e-31 | 130 |
MS.gene44039.t1 | MTR_8g076190 | 29.518 | 332 | 200 | 7 | 128 | 441 | 68 | 383 | 2.97e-30 | 127 |
MS.gene44039.t1 | MTR_4g071900 | 30.650 | 323 | 197 | 6 | 128 | 439 | 71 | 377 | 7.11e-29 | 123 |
MS.gene44039.t1 | MTR_1g075680 | 28.650 | 363 | 214 | 11 | 89 | 422 | 59 | 405 | 1.24e-26 | 115 |
MS.gene44039.t1 | MTR_3g113630 | 28.049 | 328 | 201 | 10 | 114 | 429 | 134 | 438 | 1.11e-23 | 107 |
MS.gene44039.t1 | MTR_3g113630 | 28.049 | 328 | 201 | 10 | 114 | 429 | 134 | 438 | 1.16e-23 | 107 |
MS.gene44039.t1 | MTR_6g053680 | 29.014 | 355 | 206 | 16 | 89 | 426 | 6 | 331 | 2.17e-23 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene44039.t1 | AT5G27950 | 59.603 | 604 | 237 | 4 | 32 | 630 | 23 | 624 | 0.0 | 679 |
MS.gene44039.t1 | AT5G27950 | 58.568 | 461 | 182 | 5 | 176 | 630 | 1 | 458 | 1.35e-168 | 489 |
MS.gene44039.t1 | AT1G55550 | 42.688 | 506 | 266 | 11 | 47 | 547 | 46 | 532 | 1.15e-125 | 392 |
MS.gene44039.t1 | AT5G27550 | 41.919 | 396 | 208 | 6 | 74 | 459 | 118 | 501 | 1.11e-86 | 286 |
MS.gene44039.t1 | AT5G27550 | 41.919 | 396 | 208 | 6 | 74 | 459 | 118 | 501 | 1.11e-86 | 286 |
MS.gene44039.t1 | AT2G22610 | 38.462 | 494 | 240 | 14 | 7 | 476 | 349 | 802 | 3.79e-82 | 280 |
MS.gene44039.t1 | AT2G22610 | 38.462 | 494 | 240 | 14 | 7 | 476 | 349 | 802 | 4.87e-82 | 280 |
MS.gene44039.t1 | AT2G22610 | 38.462 | 494 | 240 | 14 | 7 | 476 | 350 | 803 | 5.78e-82 | 280 |
MS.gene44039.t1 | AT1G72250 | 40.389 | 463 | 216 | 13 | 49 | 465 | 454 | 902 | 7.80e-81 | 278 |
MS.gene44039.t1 | AT1G72250 | 40.389 | 463 | 216 | 13 | 49 | 465 | 445 | 893 | 9.45e-81 | 277 |
MS.gene44039.t1 | AT1G72250 | 40.389 | 463 | 216 | 13 | 49 | 465 | 466 | 914 | 1.11e-80 | 277 |
MS.gene44039.t1 | AT1G72250 | 40.389 | 463 | 216 | 13 | 49 | 465 | 465 | 913 | 1.14e-80 | 277 |
MS.gene44039.t1 | AT1G09170 | 39.803 | 407 | 201 | 12 | 69 | 453 | 415 | 799 | 5.62e-74 | 254 |
MS.gene44039.t1 | AT1G09170 | 39.803 | 407 | 201 | 12 | 69 | 453 | 415 | 799 | 1.30e-73 | 254 |
MS.gene44039.t1 | AT4G21270 | 38.642 | 383 | 217 | 5 | 49 | 414 | 392 | 773 | 1.92e-73 | 251 |
MS.gene44039.t1 | AT1G09170 | 41.144 | 367 | 175 | 10 | 69 | 414 | 415 | 761 | 1.96e-73 | 252 |
MS.gene44039.t1 | AT1G09170 | 41.144 | 367 | 175 | 10 | 69 | 414 | 415 | 761 | 1.96e-73 | 252 |
MS.gene44039.t1 | AT1G09170 | 39.803 | 407 | 201 | 12 | 69 | 453 | 415 | 799 | 7.27e-73 | 254 |
MS.gene44039.t1 | AT5G54670 | 39.305 | 374 | 213 | 6 | 54 | 414 | 302 | 674 | 1.63e-72 | 247 |
MS.gene44039.t1 | AT4G05190 | 40.896 | 357 | 193 | 6 | 75 | 414 | 402 | 757 | 2.03e-72 | 248 |
MS.gene44039.t1 | AT4G05190 | 40.896 | 357 | 193 | 6 | 75 | 414 | 415 | 770 | 2.71e-72 | 248 |
MS.gene44039.t1 | AT5G54670 | 39.305 | 374 | 213 | 6 | 54 | 414 | 362 | 734 | 4.39e-72 | 247 |
MS.gene44039.t1 | AT5G54670 | 39.305 | 374 | 213 | 6 | 54 | 414 | 362 | 734 | 4.39e-72 | 247 |
MS.gene44039.t1 | AT4G27180 | 39.840 | 374 | 211 | 6 | 54 | 414 | 353 | 725 | 2.22e-71 | 245 |
MS.gene44039.t1 | AT4G27180 | 39.840 | 374 | 211 | 6 | 54 | 414 | 353 | 725 | 2.22e-71 | 245 |
MS.gene44039.t1 | AT5G65930 | 39.572 | 374 | 211 | 6 | 46 | 413 | 845 | 1209 | 2.49e-71 | 251 |
MS.gene44039.t1 | AT5G65930 | 39.572 | 374 | 211 | 6 | 46 | 413 | 844 | 1208 | 2.51e-71 | 251 |
MS.gene44039.t1 | AT5G65930 | 39.840 | 374 | 210 | 6 | 46 | 413 | 851 | 1215 | 2.72e-71 | 251 |
MS.gene44039.t1 | AT5G27000 | 41.799 | 378 | 189 | 10 | 69 | 426 | 375 | 741 | 6.80e-70 | 244 |
MS.gene44039.t1 | AT2G47500 | 40.102 | 394 | 211 | 10 | 70 | 448 | 381 | 764 | 9.01e-67 | 235 |
MS.gene44039.t1 | AT2G47500 | 40.102 | 394 | 211 | 10 | 70 | 448 | 381 | 764 | 1.12e-66 | 236 |
MS.gene44039.t1 | AT3G44730 | 37.500 | 416 | 232 | 9 | 44 | 442 | 335 | 739 | 1.51e-64 | 230 |
MS.gene44039.t1 | AT3G44730 | 37.500 | 416 | 232 | 9 | 44 | 442 | 335 | 739 | 1.51e-64 | 230 |
MS.gene44039.t1 | AT3G44730 | 37.500 | 416 | 232 | 9 | 44 | 442 | 380 | 784 | 2.01e-64 | 230 |
MS.gene44039.t1 | AT3G44730 | 37.500 | 416 | 232 | 9 | 44 | 442 | 380 | 784 | 2.01e-64 | 230 |
MS.gene44039.t1 | AT3G10310 | 36.867 | 415 | 214 | 11 | 47 | 428 | 312 | 711 | 8.77e-64 | 227 |
MS.gene44039.t1 | AT3G10310 | 36.867 | 415 | 214 | 11 | 47 | 428 | 312 | 711 | 1.53e-63 | 226 |
MS.gene44039.t1 | AT1G09170 | 40.841 | 333 | 156 | 10 | 69 | 380 | 415 | 727 | 3.79e-62 | 219 |
MS.gene44039.t1 | AT1G09170 | 40.841 | 333 | 156 | 10 | 69 | 380 | 415 | 727 | 3.79e-62 | 219 |
MS.gene44039.t1 | AT1G63640 | 39.888 | 356 | 193 | 9 | 71 | 414 | 445 | 791 | 2.39e-61 | 221 |
MS.gene44039.t1 | AT1G09170 | 36.098 | 410 | 176 | 11 | 69 | 453 | 415 | 763 | 2.91e-61 | 220 |
MS.gene44039.t1 | AT1G63640 | 39.888 | 356 | 193 | 9 | 71 | 414 | 455 | 801 | 3.28e-61 | 221 |
MS.gene44039.t1 | AT1G63640 | 39.888 | 356 | 193 | 9 | 71 | 414 | 455 | 801 | 3.30e-61 | 221 |
MS.gene44039.t1 | AT1G63640 | 39.888 | 356 | 193 | 9 | 71 | 414 | 455 | 801 | 3.30e-61 | 221 |
MS.gene44039.t1 | AT5G41310 | 36.813 | 364 | 171 | 9 | 73 | 414 | 407 | 733 | 8.37e-61 | 219 |
MS.gene44039.t1 | AT1G63640 | 39.326 | 356 | 188 | 9 | 71 | 414 | 455 | 794 | 1.22e-60 | 219 |
MS.gene44039.t1 | AT1G73860 | 38.000 | 350 | 199 | 8 | 76 | 414 | 414 | 756 | 4.24e-59 | 214 |
MS.gene44039.t1 | AT1G73860 | 38.000 | 350 | 199 | 8 | 76 | 414 | 497 | 839 | 1.06e-58 | 213 |
MS.gene44039.t1 | AT1G18410 | 36.311 | 347 | 202 | 6 | 79 | 414 | 480 | 818 | 1.16e-56 | 207 |
MS.gene44039.t1 | AT1G18410 | 36.311 | 347 | 202 | 6 | 79 | 414 | 480 | 818 | 1.16e-56 | 207 |
MS.gene44039.t1 | AT1G18410 | 36.311 | 347 | 202 | 6 | 79 | 414 | 623 | 961 | 4.10e-56 | 206 |
MS.gene44039.t1 | AT1G18410 | 35.735 | 347 | 196 | 5 | 79 | 414 | 470 | 800 | 4.89e-56 | 205 |
MS.gene44039.t1 | AT1G18410 | 35.817 | 349 | 193 | 6 | 79 | 414 | 623 | 953 | 1.69e-55 | 204 |
MS.gene44039.t1 | AT1G12430 | 33.498 | 406 | 211 | 10 | 89 | 455 | 71 | 456 | 2.58e-54 | 200 |
MS.gene44039.t1 | AT1G12430 | 33.498 | 406 | 211 | 10 | 89 | 455 | 71 | 456 | 2.69e-54 | 199 |
MS.gene44039.t1 | AT2G28620 | 33.258 | 442 | 237 | 12 | 88 | 481 | 50 | 481 | 3.55e-54 | 200 |
MS.gene44039.t1 | AT2G28620 | 33.258 | 442 | 237 | 12 | 88 | 481 | 50 | 481 | 3.55e-54 | 200 |
MS.gene44039.t1 | AT2G28620 | 33.258 | 442 | 237 | 12 | 88 | 481 | 50 | 481 | 4.16e-54 | 200 |
MS.gene44039.t1 | AT3G63480 | 36.877 | 301 | 167 | 6 | 128 | 416 | 48 | 337 | 9.28e-54 | 191 |
MS.gene44039.t1 | AT5G65460 | 37.356 | 348 | 192 | 9 | 71 | 411 | 122 | 450 | 3.63e-53 | 197 |
MS.gene44039.t1 | AT5G65460 | 37.356 | 348 | 192 | 9 | 71 | 411 | 122 | 450 | 3.79e-53 | 197 |
MS.gene44039.t1 | AT5G65460 | 37.356 | 348 | 192 | 9 | 71 | 411 | 122 | 450 | 5.08e-53 | 197 |
MS.gene44039.t1 | AT5G65460 | 37.356 | 348 | 192 | 9 | 71 | 411 | 122 | 450 | 6.53e-53 | 196 |
MS.gene44039.t1 | AT3G45850 | 34.759 | 374 | 213 | 9 | 88 | 437 | 55 | 421 | 1.18e-51 | 192 |
MS.gene44039.t1 | AT3G45850 | 34.759 | 374 | 213 | 9 | 88 | 437 | 55 | 421 | 1.18e-51 | 192 |
MS.gene44039.t1 | AT3G63480 | 36.393 | 305 | 167 | 7 | 128 | 416 | 48 | 341 | 1.46e-51 | 185 |
MS.gene44039.t1 | AT1G18550 | 39.016 | 305 | 160 | 9 | 115 | 413 | 197 | 481 | 5.92e-51 | 188 |
MS.gene44039.t1 | AT5G65460 | 36.620 | 355 | 192 | 10 | 71 | 411 | 122 | 457 | 1.26e-50 | 190 |
MS.gene44039.t1 | AT1G01950 | 33.251 | 403 | 224 | 10 | 85 | 455 | 57 | 446 | 1.48e-50 | 188 |
MS.gene44039.t1 | AT1G01950 | 33.251 | 403 | 224 | 10 | 85 | 455 | 57 | 446 | 1.58e-50 | 189 |
MS.gene44039.t1 | AT1G01950 | 33.251 | 403 | 224 | 10 | 85 | 455 | 57 | 446 | 1.63e-50 | 188 |
MS.gene44039.t1 | AT2G37420 | 36.061 | 330 | 194 | 5 | 128 | 441 | 95 | 423 | 2.85e-50 | 188 |
MS.gene44039.t1 | AT2G37420 | 36.061 | 330 | 194 | 5 | 128 | 441 | 95 | 423 | 2.85e-50 | 188 |
MS.gene44039.t1 | AT5G10470 | 35.263 | 380 | 213 | 10 | 39 | 411 | 101 | 454 | 5.08e-50 | 188 |
MS.gene44039.t1 | AT5G10470 | 35.263 | 380 | 213 | 10 | 39 | 411 | 101 | 454 | 5.62e-50 | 188 |
MS.gene44039.t1 | AT1G59540 | 35.227 | 352 | 199 | 8 | 130 | 464 | 46 | 385 | 3.21e-49 | 184 |
MS.gene44039.t1 | AT2G36200 | 34.530 | 362 | 211 | 8 | 88 | 425 | 12 | 371 | 8.52e-49 | 184 |
MS.gene44039.t1 | AT2G36200 | 34.530 | 362 | 211 | 8 | 88 | 425 | 12 | 371 | 1.36e-48 | 183 |
MS.gene44039.t1 | AT3G50240 | 35.676 | 370 | 189 | 14 | 89 | 419 | 26 | 385 | 4.30e-48 | 181 |
MS.gene44039.t1 | AT3G54870 | 33.978 | 362 | 195 | 9 | 128 | 462 | 150 | 494 | 1.10e-47 | 180 |
MS.gene44039.t1 | AT3G54870 | 33.978 | 362 | 195 | 9 | 128 | 462 | 150 | 494 | 1.14e-47 | 180 |
MS.gene44039.t1 | AT3G54870 | 33.518 | 361 | 198 | 8 | 128 | 462 | 150 | 494 | 1.41e-47 | 180 |
MS.gene44039.t1 | AT3G50240 | 35.676 | 370 | 189 | 14 | 89 | 419 | 26 | 385 | 2.82e-47 | 179 |
MS.gene44039.t1 | AT3G50240 | 35.676 | 370 | 189 | 14 | 89 | 419 | 26 | 385 | 2.98e-47 | 179 |
MS.gene44039.t1 | AT3G44050 | 35.311 | 354 | 191 | 8 | 88 | 416 | 93 | 433 | 9.72e-46 | 175 |
MS.gene44039.t1 | AT5G60930 | 34.615 | 364 | 200 | 13 | 89 | 419 | 7 | 365 | 1.27e-45 | 175 |
MS.gene44039.t1 | AT5G60930 | 34.615 | 364 | 200 | 13 | 89 | 419 | 7 | 365 | 1.70e-45 | 174 |
MS.gene44039.t1 | AT5G60930 | 34.615 | 364 | 200 | 13 | 89 | 419 | 7 | 365 | 2.64e-45 | 174 |
MS.gene44039.t1 | AT3G19050 | 33.618 | 351 | 201 | 7 | 88 | 416 | 193 | 533 | 1.13e-44 | 172 |
MS.gene44039.t1 | AT5G47820 | 33.151 | 365 | 200 | 11 | 88 | 413 | 11 | 370 | 5.71e-44 | 169 |
MS.gene44039.t1 | AT5G47820 | 33.151 | 365 | 200 | 11 | 88 | 413 | 11 | 370 | 5.71e-44 | 169 |
MS.gene44039.t1 | AT3G17360 | 34.463 | 354 | 200 | 7 | 88 | 419 | 168 | 511 | 8.01e-44 | 169 |
MS.gene44039.t1 | AT3G17360 | 34.463 | 354 | 200 | 7 | 88 | 419 | 168 | 511 | 9.99e-44 | 169 |
MS.gene44039.t1 | AT3G17360 | 34.463 | 354 | 200 | 7 | 88 | 419 | 168 | 511 | 1.07e-43 | 169 |
MS.gene44039.t1 | AT3G10180 | 35.119 | 336 | 189 | 8 | 89 | 410 | 4 | 324 | 1.86e-43 | 168 |
MS.gene44039.t1 | AT4G14150 | 37.072 | 321 | 166 | 8 | 128 | 423 | 126 | 435 | 2.03e-43 | 168 |
MS.gene44039.t1 | AT3G10180 | 35.119 | 336 | 189 | 8 | 89 | 410 | 4 | 324 | 2.27e-43 | 168 |
MS.gene44039.t1 | AT3G49650 | 31.988 | 347 | 210 | 5 | 126 | 467 | 64 | 389 | 3.59e-43 | 166 |
MS.gene44039.t1 | AT3G23670 | 36.196 | 326 | 162 | 8 | 128 | 423 | 131 | 440 | 7.90e-42 | 163 |
MS.gene44039.t1 | AT2G21380 | 33.249 | 394 | 229 | 11 | 86 | 459 | 102 | 481 | 8.70e-42 | 163 |
MS.gene44039.t1 | AT2G21380 | 33.249 | 394 | 229 | 11 | 86 | 459 | 102 | 481 | 8.70e-42 | 163 |
MS.gene44039.t1 | AT3G23670 | 36.196 | 326 | 162 | 8 | 128 | 423 | 131 | 440 | 1.82e-41 | 162 |
MS.gene44039.t1 | AT4G39050 | 33.791 | 364 | 216 | 9 | 86 | 437 | 96 | 446 | 6.74e-41 | 160 |
MS.gene44039.t1 | AT1G18370 | 33.043 | 345 | 203 | 8 | 128 | 461 | 78 | 405 | 1.39e-39 | 156 |
MS.gene44039.t1 | AT5G06670 | 32.746 | 397 | 235 | 10 | 81 | 458 | 59 | 442 | 1.75e-39 | 155 |
MS.gene44039.t1 | AT5G06670 | 32.746 | 397 | 235 | 10 | 81 | 458 | 59 | 442 | 1.78e-39 | 155 |
MS.gene44039.t1 | AT5G06670 | 32.746 | 397 | 235 | 10 | 81 | 458 | 59 | 442 | 1.78e-39 | 155 |
MS.gene44039.t1 | AT5G06670 | 32.746 | 397 | 235 | 10 | 81 | 458 | 59 | 442 | 1.78e-39 | 155 |
MS.gene44039.t1 | AT1G01950 | 33.962 | 318 | 172 | 7 | 163 | 455 | 1 | 305 | 1.96e-39 | 155 |
MS.gene44039.t1 | AT5G06670 | 32.746 | 397 | 235 | 10 | 81 | 458 | 59 | 442 | 6.34e-39 | 154 |
MS.gene44039.t1 | AT5G06670 | 32.746 | 397 | 235 | 10 | 81 | 458 | 59 | 442 | 6.34e-39 | 154 |
MS.gene44039.t1 | AT5G02370 | 33.333 | 291 | 171 | 5 | 128 | 416 | 74 | 343 | 3.89e-38 | 149 |
MS.gene44039.t1 | AT3G12020 | 33.824 | 340 | 205 | 9 | 86 | 418 | 67 | 393 | 4.86e-38 | 151 |
MS.gene44039.t1 | AT3G12020 | 33.824 | 340 | 205 | 9 | 86 | 418 | 67 | 393 | 4.86e-38 | 151 |
MS.gene44039.t1 | AT3G12020 | 32.615 | 371 | 225 | 11 | 86 | 444 | 67 | 424 | 8.99e-38 | 150 |
MS.gene44039.t1 | AT3G12020 | 32.615 | 371 | 225 | 11 | 86 | 444 | 67 | 424 | 8.99e-38 | 150 |
MS.gene44039.t1 | AT5G06670 | 32.266 | 406 | 234 | 11 | 81 | 458 | 59 | 451 | 1.69e-37 | 150 |
MS.gene44039.t1 | AT5G06670 | 32.266 | 406 | 234 | 11 | 81 | 458 | 59 | 451 | 1.69e-37 | 150 |
MS.gene44039.t1 | AT3G50240 | 37.500 | 288 | 140 | 10 | 167 | 420 | 3 | 284 | 2.05e-37 | 149 |
MS.gene44039.t1 | AT1G21730 | 33.432 | 338 | 203 | 9 | 85 | 414 | 72 | 395 | 6.97e-37 | 147 |
MS.gene44039.t1 | AT3G16630 | 32.571 | 350 | 194 | 10 | 89 | 413 | 194 | 526 | 3.86e-36 | 145 |
MS.gene44039.t1 | AT3G16630 | 32.571 | 350 | 194 | 10 | 89 | 413 | 194 | 526 | 3.86e-36 | 145 |
MS.gene44039.t1 | AT3G16060 | 32.059 | 340 | 199 | 8 | 89 | 413 | 170 | 492 | 1.09e-35 | 143 |
MS.gene44039.t1 | AT1G59540 | 33.770 | 305 | 174 | 7 | 176 | 464 | 1 | 293 | 4.41e-35 | 142 |
MS.gene44039.t1 | AT3G43210 | 34.328 | 335 | 174 | 9 | 128 | 442 | 74 | 382 | 6.00e-35 | 142 |
MS.gene44039.t1 | AT3G43210 | 34.328 | 335 | 174 | 9 | 128 | 442 | 74 | 382 | 6.00e-35 | 142 |
MS.gene44039.t1 | AT3G43210 | 34.328 | 335 | 174 | 9 | 128 | 442 | 74 | 382 | 6.00e-35 | 142 |
MS.gene44039.t1 | AT3G43210 | 34.328 | 335 | 174 | 9 | 128 | 442 | 74 | 382 | 6.00e-35 | 142 |
MS.gene44039.t1 | AT3G43210 | 34.328 | 335 | 174 | 9 | 128 | 442 | 74 | 382 | 6.00e-35 | 142 |
MS.gene44039.t1 | AT4G24170 | 31.099 | 373 | 226 | 11 | 89 | 449 | 7 | 360 | 1.09e-32 | 135 |
MS.gene44039.t1 | AT4G24170 | 31.099 | 373 | 226 | 11 | 89 | 449 | 7 | 360 | 1.09e-32 | 135 |
MS.gene44039.t1 | AT5G66310 | 30.663 | 362 | 220 | 8 | 89 | 435 | 19 | 364 | 1.99e-31 | 131 |
MS.gene44039.t1 | AT5G66310 | 30.663 | 362 | 220 | 8 | 89 | 435 | 19 | 364 | 1.99e-31 | 131 |
MS.gene44039.t1 | AT5G66310 | 30.663 | 362 | 220 | 8 | 89 | 435 | 19 | 364 | 1.99e-31 | 131 |
MS.gene44039.t1 | AT3G51150 | 30.636 | 346 | 209 | 7 | 89 | 419 | 18 | 347 | 4.21e-30 | 127 |
MS.gene44039.t1 | AT3G51150 | 30.636 | 346 | 209 | 7 | 89 | 419 | 18 | 347 | 4.40e-30 | 127 |
MS.gene44039.t1 | AT3G51150 | 30.636 | 346 | 209 | 7 | 89 | 419 | 18 | 347 | 4.40e-30 | 127 |
MS.gene44039.t1 | AT3G51150 | 30.636 | 346 | 209 | 7 | 89 | 419 | 18 | 347 | 4.40e-30 | 127 |
MS.gene44039.t1 | AT4G14330 | 30.372 | 349 | 203 | 13 | 89 | 420 | 49 | 374 | 6.31e-30 | 126 |
MS.gene44039.t1 | AT4G38950 | 28.424 | 387 | 248 | 7 | 128 | 503 | 60 | 428 | 1.03e-29 | 125 |
MS.gene44039.t1 | AT4G38950 | 28.424 | 387 | 248 | 7 | 128 | 503 | 60 | 428 | 1.03e-29 | 125 |
MS.gene44039.t1 | AT4G38950 | 28.424 | 387 | 248 | 7 | 128 | 503 | 60 | 428 | 1.03e-29 | 125 |
MS.gene44039.t1 | AT4G38950 | 28.424 | 387 | 248 | 7 | 128 | 503 | 60 | 428 | 1.03e-29 | 125 |
MS.gene44039.t1 | AT4G38950 | 28.424 | 387 | 248 | 7 | 128 | 503 | 60 | 428 | 1.03e-29 | 125 |
MS.gene44039.t1 | AT3G20150 | 28.954 | 373 | 209 | 14 | 118 | 460 | 126 | 472 | 1.38e-29 | 125 |
MS.gene44039.t1 | AT3G20150 | 28.954 | 373 | 209 | 14 | 118 | 460 | 126 | 472 | 1.77e-29 | 125 |
MS.gene44039.t1 | AT2G21300 | 26.992 | 389 | 250 | 9 | 128 | 503 | 71 | 438 | 8.18e-28 | 119 |
MS.gene44039.t1 | AT2G21300 | 26.992 | 389 | 250 | 9 | 128 | 503 | 71 | 438 | 8.18e-28 | 119 |
MS.gene44039.t1 | AT2G21300 | 26.992 | 389 | 250 | 9 | 128 | 503 | 71 | 438 | 8.18e-28 | 119 |
MS.gene44039.t1 | AT2G21300 | 26.992 | 389 | 250 | 9 | 128 | 503 | 71 | 438 | 8.18e-28 | 119 |
MS.gene44039.t1 | AT2G21300 | 26.992 | 389 | 250 | 9 | 128 | 503 | 71 | 438 | 8.18e-28 | 119 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 7.31e-22 | 101 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 7.64e-22 | 101 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 8.02e-22 | 101 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 8.89e-22 | 100 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 8.96e-22 | 100 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 9.06e-22 | 100 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 9.07e-22 | 100 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 9.30e-22 | 100 |
MS.gene44039.t1 | AT1G20060 | 30.769 | 286 | 168 | 7 | 130 | 400 | 165 | 435 | 9.42e-22 | 100 |
MS.gene44039.t1 | AT5G65460 | 35.238 | 210 | 120 | 5 | 202 | 411 | 11 | 204 | 1.20e-21 | 100 |
MS.gene44039.t1 | AT5G42490 | 30.565 | 301 | 174 | 8 | 89 | 375 | 10 | 289 | 6.70e-21 | 98.2 |
MS.gene44039.t1 | AT5G42490 | 30.565 | 301 | 174 | 8 | 89 | 375 | 10 | 289 | 7.23e-21 | 98.2 |
MS.gene44039.t1 | AT5G23910 | 25.000 | 308 | 201 | 10 | 108 | 409 | 35 | 318 | 1.92e-18 | 90.1 |
MS.gene44039.t1 | AT5G23910 | 25.000 | 308 | 201 | 10 | 108 | 409 | 31 | 314 | 2.07e-18 | 89.7 |
MS.gene44039.t1 | AT1G20060 | 28.667 | 300 | 168 | 10 | 130 | 400 | 165 | 447 | 5.30e-16 | 82.4 |
MS.gene44039.t1 | AT3G51150 | 34.270 | 178 | 111 | 3 | 247 | 419 | 18 | 194 | 8.97e-15 | 78.6 |
Find 129 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGAAACTGGATTGAATTTC+TGG | 0.187797 | 1.3:+57719064 | None:intergenic |
ATTGCTTCTGAGCAAGAAAT+TGG | 0.198491 | 1.3:-57719119 | MS.gene44039:CDS |
CTTTCTGTATGAATGGTATT+TGG | 0.211936 | 1.3:+57718942 | None:intergenic |
TACCATGGGTACTTCTTTAT+TGG | 0.215769 | 1.3:+57719530 | None:intergenic |
CAACTTACTTGTTTCGCTTT+TGG | 0.229066 | 1.3:+57720329 | None:intergenic |
GATTCCAATTCATTGCATTT+AGG | 0.255497 | 1.3:+57718918 | None:intergenic |
TGTATACATACTTTGCAAAT+TGG | 0.261698 | 1.3:+57721935 | None:intergenic |
TCAATTTCCACCAATCCTTT+TGG | 0.286801 | 1.3:+57720607 | None:intergenic |
AGGATGTCTAACCTGATCTA+AGG | 0.293439 | 1.3:-57718816 | None:intergenic |
GTAGACTTCTTAGATGCTTT+AGG | 0.304166 | 1.3:+57719209 | None:intergenic |
ACAAAAGGAGATGAAAATTA+TGG | 0.305383 | 1.3:-57719417 | MS.gene44039:CDS |
TTGCGAAGTTCAACTGGAAT+TGG | 0.308453 | 1.3:-57718996 | MS.gene44039:CDS |
CAGCTGGATCCGAGAGAATT+CGG | 0.314670 | 1.3:-57721570 | MS.gene44039:CDS |
AGAAGCATTGAGTAAGATAT+TGG | 0.315650 | 1.3:-57721764 | MS.gene44039:CDS |
ACCCTTGTTGTACCACCATT+TGG | 0.318022 | 1.3:+57720546 | None:intergenic |
TTCAGCCACATATAATCTTC+AGG | 0.331238 | 1.3:-57719294 | MS.gene44039:CDS |
GTGTGGTCTACAAGATTGTC+TGG | 0.340734 | 1.3:+57720995 | None:intergenic |
ACTGAATTGGAGACACTTCT+TGG | 0.340869 | 1.3:+57719185 | None:intergenic |
CTTAGATGCTTTAGGAGTTT+CGG | 0.345571 | 1.3:+57719217 | None:intergenic |
TTCAGTTGATGGGTCGTTAC+CGG | 0.348863 | 1.3:-57722027 | MS.gene44039:CDS |
ATGATTGAGAACATGGAAAC+TGG | 0.367464 | 1.3:+57719051 | None:intergenic |
AAGGCCTAAATGCAATGAAT+TGG | 0.377660 | 1.3:-57718922 | MS.gene44039:CDS |
GGAGCTCGAGGAAGACATTA+AGG | 0.379240 | 1.3:-57719396 | MS.gene44039:CDS |
CCTCTTTGAAATCATCTTTG+AGG | 0.380046 | 1.3:+57719243 | None:intergenic |
TTGCTTCTGAGCAAGAAATT+GGG | 0.388664 | 1.3:-57719118 | MS.gene44039:CDS |
GCAATATTGCGAAGTTCAAC+TGG | 0.391646 | 1.3:-57719002 | MS.gene44039:CDS |
TCTAAGTCAGATTCAGTTGA+TGG | 0.396983 | 1.3:-57722038 | MS.gene44039:CDS |
ACAACAAGGGTAGAAGATTC+AGG | 0.398057 | 1.3:-57720534 | MS.gene44039:CDS |
CATGAATCGAGGCACTGAAT+TGG | 0.401194 | 1.3:+57719172 | None:intergenic |
CCACACCAACCTCTGGCAAA+TGG | 0.409803 | 1.3:-57720978 | MS.gene44039:CDS |
AAGTTTACATGGGCAATGTC+AGG | 0.416052 | 1.3:-57721031 | MS.gene44039:CDS |
TTTAGGCCTTTCTGTATGAA+TGG | 0.421268 | 1.3:+57718935 | None:intergenic |
CAAGAGAATCTCTCAGTAGT+TGG | 0.422035 | 1.3:+57719844 | None:intergenic |
CTCTCGGATCCAGCTGATAC+AGG | 0.426118 | 1.3:+57721577 | None:intergenic |
AGAGGTGTCATGTACCTTAC+AGG | 0.432518 | 1.3:-57720176 | MS.gene44039:intron |
TCAGTGAAAACCGTCGAAAC+CGG | 0.432575 | 1.3:+57722008 | None:intergenic |
CAGTATAATACTTGCCTGTA+AGG | 0.434099 | 1.3:+57720162 | None:intergenic |
TTCATCAAGTGTTAGTCCTC+TGG | 0.444724 | 1.3:+57720260 | None:intergenic |
AAAAGGATTGGTGGAAATTG+AGG | 0.447521 | 1.3:-57720605 | MS.gene44039:CDS |
GGGCAATGTCAGGGATCTGC+TGG | 0.449148 | 1.3:-57721021 | MS.gene44039:CDS |
CACACCAACCTCTGGCAAAT+GGG | 0.458482 | 1.3:-57720977 | MS.gene44039:intron |
TGTCTTGTAACCCTTAGATC+AGG | 0.465647 | 1.3:+57718805 | None:intergenic |
GAGAGAATTCGGGTTAAGTT+CGG | 0.468912 | 1.3:-57721559 | MS.gene44039:CDS |
GAGTATGTTGGAAGTTTACA+TGG | 0.477657 | 1.3:-57721042 | MS.gene44039:CDS |
CTTGACGAAAGAGCTCTTCA+AGG | 0.480167 | 1.3:+57721102 | None:intergenic |
AAGAGAATCTCTCAGTAGTT+GGG | 0.488686 | 1.3:+57719845 | None:intergenic |
AATTCTGAACCTGTATCAGC+TGG | 0.489459 | 1.3:-57721586 | MS.gene44039:CDS |
TCCATTGCAGATCTTAGAAT+CGG | 0.500552 | 1.3:+57721344 | None:intergenic |
AGAGAAAAGTGGATGAAAAG+AGG | 0.507012 | 1.3:-57721789 | MS.gene44039:CDS |
GCAGGAATTGAAGAAACAAA+AGG | 0.507842 | 1.3:-57719432 | MS.gene44039:intron |
TTGCAGCTCTGAAGAGAAAG+AGG | 0.510843 | 1.3:-57720194 | MS.gene44039:CDS |
TTGTAGACCACACCAACCTC+TGG | 0.516366 | 1.3:-57720985 | MS.gene44039:CDS |
AAGTTGTGGATGGTTGATCT+TGG | 0.516461 | 1.3:-57720312 | MS.gene44039:CDS |
AGCTGGATCCGAGAGAATTC+GGG | 0.517131 | 1.3:-57721569 | MS.gene44039:CDS |
AACAGATCCAAAAGGATTGG+TGG | 0.517605 | 1.3:-57720614 | MS.gene44039:CDS |
AAAGGATTGGTGGAAATTGA+GGG | 0.519322 | 1.3:-57720604 | MS.gene44039:CDS |
AAAAGAAGATGAACCATCCA+TGG | 0.524875 | 1.3:+57721076 | None:intergenic |
GTTACCCATTTGCCAGAGGT+TGG | 0.526134 | 1.3:+57720973 | None:intergenic |
CGTTATGTCGTCATAGAAGA+AGG | 0.526735 | 1.3:-57718836 | MS.gene44039:CDS |
GCTCTTTCGTCAAGCATCCA+TGG | 0.528938 | 1.3:-57721093 | MS.gene44039:CDS |
TAGCCTTGGCTTGCTTCTTG+AGG | 0.531307 | 1.3:+57721499 | None:intergenic |
CCAAACAGATCCAAAAGGAT+TGG | 0.533010 | 1.3:-57720617 | MS.gene44039:CDS |
CGCAAACATCTTCTTCAGAC+GGG | 0.533713 | 1.3:+57719601 | None:intergenic |
CAAATACCATTCATACAGAA+AGG | 0.535907 | 1.3:-57718941 | MS.gene44039:CDS |
CCATTTGCCAGAGGTTGGTG+TGG | 0.540465 | 1.3:+57720978 | None:intergenic |
ACTTTCCTGAAGATTATATG+TGG | 0.545055 | 1.3:+57719289 | None:intergenic |
GGATTAGCATATTTAGACGT+GGG | 0.546465 | 1.3:-57720365 | MS.gene44039:CDS |
TCTTCAGGAAAGTGATGACT+TGG | 0.547011 | 1.3:-57719279 | MS.gene44039:CDS |
TGCTTCTGAGCAAGAAATTG+GGG | 0.547640 | 1.3:-57719117 | MS.gene44039:CDS |
CTGATTGTGCTAAAGCCAAA+TGG | 0.549838 | 1.3:-57720561 | MS.gene44039:CDS |
CTAAGTCAGATTCAGTTGAT+GGG | 0.551965 | 1.3:-57722037 | MS.gene44039:CDS |
GATGGTACAAATGAGCAGCC+AGG | 0.552457 | 1.3:-57721140 | MS.gene44039:CDS |
TTTCGTCAAGCATCCATGGA+TGG | 0.554699 | 1.3:-57721089 | MS.gene44039:CDS |
AACATCCAAACAGATCCAAA+AGG | 0.557163 | 1.3:-57720622 | MS.gene44039:CDS |
CAACTGTTGCTAGTCGGCAC+AGG | 0.558710 | 1.3:-57719145 | MS.gene44039:CDS |
GCCGATTCTAAGATCTGCAA+TGG | 0.560021 | 1.3:-57721345 | MS.gene44039:CDS |
GAACATTATTTGTTTCAGCA+TGG | 0.561579 | 1.3:+57718964 | None:intergenic |
TAACTTAATGATTGAGAACA+TGG | 0.561666 | 1.3:+57719044 | None:intergenic |
AGCCAAATGGTGGTACAACA+AGG | 0.566753 | 1.3:-57720548 | MS.gene44039:CDS |
TTGTGGATGGTTGATCTTGG+AGG | 0.567166 | 1.3:-57720309 | MS.gene44039:CDS |
ATGGTACAAATGAGCAGCCA+GGG | 0.567960 | 1.3:-57721139 | MS.gene44039:CDS |
TAATGAAGAAGAAAAGATTG+AGG | 0.571574 | 1.3:-57722087 | MS.gene44039:CDS |
CTCATTTACGTTAGTCCACG+AGG | 0.575693 | 1.3:+57720507 | None:intergenic |
GCTTACGGTCAAACAGGCAC+AGG | 0.575896 | 1.3:-57721299 | MS.gene44039:CDS |
GAACTTAACCCGAATTCTCT+CGG | 0.580661 | 1.3:+57721561 | None:intergenic |
TCGCAAACATCTTCTTCAGA+CGG | 0.582816 | 1.3:+57719600 | None:intergenic |
CTCGTGGACTAACGTAAATG+AGG | 0.583814 | 1.3:-57720506 | MS.gene44039:CDS |
CGAAACAAGTAAGTTGTGGA+TGG | 0.585082 | 1.3:-57720322 | MS.gene44039:CDS |
GGATGTCTAACCTGATCTAA+GGG | 0.588193 | 1.3:-57718815 | None:intergenic |
GAGGTAACCGTTGTACTTCG+AGG | 0.589043 | 1.3:+57718882 | None:intergenic |
AGTAAGATATTGGATATCAA+AGG | 0.589298 | 1.3:-57721754 | MS.gene44039:intron |
CAACTACTGAGAGATTCTCT+TGG | 0.590458 | 1.3:-57719843 | MS.gene44039:intron |
GTCCAATAAAGAAGTACCCA+TGG | 0.593300 | 1.3:-57719532 | MS.gene44039:intron |
TACGTAAGGTGATGGCTCGA+AGG | 0.593460 | 1.3:-57719646 | MS.gene44039:intron |
TGGGTCGTTACCGGTTTCGA+CGG | 0.594050 | 1.3:-57722018 | MS.gene44039:CDS |
AGTTTACATGGGCAATGTCA+GGG | 0.594144 | 1.3:-57721030 | MS.gene44039:CDS |
AAAGCGAAACAAGTAAGTTG+TGG | 0.596701 | 1.3:-57720326 | MS.gene44039:CDS |
GAGGCTGAAGCAGAGAAAAG+TGG | 0.597225 | 1.3:-57721800 | MS.gene44039:CDS |
ATCATCTTTGAGGCTAGTAG+AGG | 0.598803 | 1.3:+57719253 | None:intergenic |
AGGGCACGAGGAATAATCCC+TGG | 0.600870 | 1.3:+57721122 | None:intergenic |
TCTTTCTCTTCAGAGCTGCA+AGG | 0.605648 | 1.3:+57720196 | None:intergenic |
TCTCAGATTTGAATCTGATG+AGG | 0.606051 | 1.3:+57718863 | None:intergenic |
GATGAAAATTATGGAGCTCG+AGG | 0.607000 | 1.3:-57719408 | MS.gene44039:CDS |
GGGTTAAGTTCGGAGGAACA+AGG | 0.608001 | 1.3:-57721549 | MS.gene44039:CDS |
ATTTAGACGTGGGGATACCT+CGG | 0.610990 | 1.3:-57720355 | MS.gene44039:CDS |
CCTCAAAGATGATTTCAAAG+AGG | 0.614703 | 1.3:-57719243 | MS.gene44039:CDS |
TTTCCTCAAGAAGCAAGCCA+AGG | 0.615338 | 1.3:-57721502 | MS.gene44039:intron |
TGAGTTCAACTGTTGCTAGT+CGG | 0.615739 | 1.3:-57719151 | MS.gene44039:CDS |
TTGACGAAAGAGCTCTTCAA+GGG | 0.616469 | 1.3:+57721103 | None:intergenic |
TTTATATATCTAGCTTGACA+AGG | 0.624226 | 1.3:-57720386 | MS.gene44039:intron |
AGAATTCGGGTTAAGTTCGG+AGG | 0.625212 | 1.3:-57721556 | MS.gene44039:CDS |
AGAGGACTAACACTTGATGA+AGG | 0.627442 | 1.3:-57720258 | MS.gene44039:CDS |
ATTCTAAGATCTGCAATGGA+CGG | 0.633136 | 1.3:-57721341 | MS.gene44039:CDS |
AGGATTAGCATATTTAGACG+TGG | 0.635209 | 1.3:-57720366 | MS.gene44039:CDS |
GCCAAATGGTGGTACAACAA+GGG | 0.641344 | 1.3:-57720547 | MS.gene44039:CDS |
GAAGATTCAGGTCAACCTCG+TGG | 0.645529 | 1.3:-57720522 | MS.gene44039:CDS |
AAAGGTTACCCATTTGCCAG+AGG | 0.646031 | 1.3:+57720969 | None:intergenic |
TGTGGTCTACAAGATTGTCT+GGG | 0.650862 | 1.3:+57720996 | None:intergenic |
GATTAGCATATTTAGACGTG+GGG | 0.654200 | 1.3:-57720364 | MS.gene44039:CDS |
TTGATCTTGGAGGCAGTGAA+CGG | 0.664525 | 1.3:-57720299 | MS.gene44039:CDS |
AGTATGTTGGAAGTTTACAT+GGG | 0.668329 | 1.3:-57721041 | MS.gene44039:CDS |
AAGAGCTCTTCAAGGGCACG+AGG | 0.669234 | 1.3:+57721110 | None:intergenic |
AGGCATCAAGCAGATCACAT+TGG | 0.669754 | 1.3:-57720486 | MS.gene44039:intron |
CGTAGCTCCTCGAAGTACAA+CGG | 0.673103 | 1.3:-57718889 | MS.gene44039:CDS |
GCTTCTGAGCAAGAAATTGG+GGG | 0.685151 | 1.3:-57719116 | MS.gene44039:CDS |
ACAGTTGAACTCATGAATCG+AGG | 0.697011 | 1.3:+57719161 | None:intergenic |
CAGAAGAAGTTGAGGAACTG+AGG | 0.702266 | 1.3:-57721819 | MS.gene44039:CDS |
CACAGGAAAGACATTCACCA+TGG | 0.716563 | 1.3:-57721282 | MS.gene44039:intron |
ATTGTGCTAAAGCCAAATGG+TGG | 0.763149 | 1.3:-57720558 | MS.gene44039:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATCAAATATAATTAAAAT+TGG | + | chr1.3:57719469-57719488 | None:intergenic | 10.0% |
!! | ATATTATCTAATATGTATGT+TGG | - | chr1.3:57719731-57719750 | MS.gene44039:intron | 15.0% |
!! | GTAACATAAAATTATCAATT+TGG | + | chr1.3:57721026-57721045 | None:intergenic | 15.0% |
!!! | ATAATGTTATTTTCTTTCAA+GGG | - | chr1.3:57719225-57719244 | MS.gene44039:CDS | 15.0% |
!!! | ATCAGACATTTTAATATTAT+AGG | + | chr1.3:57721237-57721256 | None:intergenic | 15.0% |
!!! | TATTTCTTTTATCTTCATTT+TGG | - | chr1.3:57719024-57719043 | MS.gene44039:CDS | 15.0% |
!! | TAATATTATAGGAAAAAACC+AGG | + | chr1.3:57721226-57721245 | None:intergenic | 20.0% |
!! | TATGATGATTGAAATTCATA+GGG | - | chr1.3:57720222-57720241 | MS.gene44039:CDS | 20.0% |
!!! | AAGTTTTATTAAGTTTACCA+TGG | + | chr1.3:57721404-57721423 | None:intergenic | 20.0% |
!!! | ACAACAAATTATATTTTGCA+TGG | + | chr1.3:57720966-57720985 | None:intergenic | 20.0% |
!!! | AGTTTTATTAAGTTTACCAT+GGG | + | chr1.3:57721403-57721422 | None:intergenic | 20.0% |
!!! | GATAATGTTATTTTCTTTCA+AGG | - | chr1.3:57719224-57719243 | MS.gene44039:CDS | 20.0% |
! | AAATATATTCCTGTAAAGGT+GGG | - | chr1.3:57720100-57720119 | MS.gene44039:intron | 25.0% |
! | ACAAAAGGAGATGAAAATTA+TGG | - | chr1.3:57721499-57721518 | MS.gene44039:intron | 25.0% |
! | AGACTAAAAATCAATTGTAG+TGG | - | chr1.3:57720139-57720158 | MS.gene44039:intron | 25.0% |
! | AGTAAGATATTGGATATCAA+AGG | - | chr1.3:57719162-57719181 | MS.gene44039:CDS | 25.0% |
! | ATTTCCACATCAGTAAAATT+CGG | + | chr1.3:57719497-57719516 | None:intergenic | 25.0% |
! | GTATGATGATTGAAATTCAT+AGG | - | chr1.3:57720221-57720240 | MS.gene44039:CDS | 25.0% |
! | GTCTAAATATATTCCTGTAA+AGG | - | chr1.3:57720096-57720115 | MS.gene44039:intron | 25.0% |
! | GTTTAATTATGTCTCTTATG+CGG | - | chr1.3:57720792-57720811 | MS.gene44039:intron | 25.0% |
! | TAAATATATTCCTGTAAAGG+TGG | - | chr1.3:57720099-57720118 | MS.gene44039:intron | 25.0% |
! | TAACTTAATGATTGAGAACA+TGG | + | chr1.3:57721875-57721894 | None:intergenic | 25.0% |
! | TAAGTTCACAACTACTTTAA+AGG | - | chr1.3:57720940-57720959 | MS.gene44039:intron | 25.0% |
! | TAATGAAGAAGAAAAGATTG+AGG | - | chr1.3:57718829-57718848 | MS.gene44039:CDS | 25.0% |
! | TCAAAATCAATTCACTTTAC+AGG | - | chr1.3:57720188-57720207 | MS.gene44039:CDS | 25.0% |
! | TCTTTATCATGAAATACGTA+AGG | - | chr1.3:57721256-57721275 | MS.gene44039:intron | 25.0% |
! | TGTATACATACTTTGCAAAT+TGG | + | chr1.3:57718984-57719003 | None:intergenic | 25.0% |
! | TTGTTTAGATGTTCTCAATT+TGG | + | chr1.3:57720167-57720186 | None:intergenic | 25.0% |
!! | TTCAGAATTTCTTCTCTTTT+CGG | + | chr1.3:57719319-57719338 | None:intergenic | 25.0% |
!! | TTTATATATCTAGCTTGACA+AGG | - | chr1.3:57720530-57720549 | MS.gene44039:CDS | 25.0% |
!!! | GAAAGATTTTGAGTTTGATA+AGG | - | chr1.3:57719389-57719408 | MS.gene44039:CDS | 25.0% |
!!! | GAATTTCATTTTGATATCCA+GGG | - | chr1.3:57719253-57719272 | MS.gene44039:CDS | 25.0% |
!!! | TACTTTTTCAATGAGTATGT+TGG | - | chr1.3:57719862-57719881 | MS.gene44039:CDS | 25.0% |
!!! | TGCTATGATTAATTTTAGGA+TGG | - | chr1.3:57719758-57719777 | MS.gene44039:intron | 25.0% |
AATTATCAATTTGGATGCAG+TGG | + | chr1.3:57721017-57721036 | None:intergenic | 30.0% | |
ACTTTCCTGAAGATTATATG+TGG | + | chr1.3:57721630-57721649 | None:intergenic | 30.0% | |
AGTATGTTGGAAGTTTACAT+GGG | - | chr1.3:57719875-57719894 | MS.gene44039:intron | 30.0% | |
ATATCAAAGGTAGTTGTTGT+AGG | - | chr1.3:57719175-57719194 | MS.gene44039:CDS | 30.0% | |
CAAATACCATTCATACAGAA+AGG | - | chr1.3:57721975-57721994 | MS.gene44039:CDS | 30.0% | |
CTTTCTGTATGAATGGTATT+TGG | + | chr1.3:57721977-57721996 | None:intergenic | 30.0% | |
GAACATTATTTGTTTCAGCA+TGG | + | chr1.3:57721955-57721974 | None:intergenic | 30.0% | |
GATTCCAATTCATTGCATTT+AGG | + | chr1.3:57722001-57722020 | None:intergenic | 30.0% | |
GGTTTAGTGAAAATAGCAAA+AGG | + | chr1.3:57719968-57719987 | None:intergenic | 30.0% | |
TATCAAAGGTAGTTGTTGTA+GGG | - | chr1.3:57719176-57719195 | MS.gene44039:CDS | 30.0% | |
TTACTGCTTACATTTAATGC+AGG | - | chr1.3:57721466-57721485 | MS.gene44039:intron | 30.0% | |
! | ATTCATAGGGTAATTTGTCT+TGG | - | chr1.3:57720235-57720254 | MS.gene44039:CDS | 30.0% |
! | CTGCTGCTATGATTAATTTT+AGG | - | chr1.3:57719754-57719773 | MS.gene44039:intron | 30.0% |
! | GTTTTCAGAAAATGAAACTG+AGG | - | chr1.3:57718853-57718872 | MS.gene44039:CDS | 30.0% |
!! | AGAAGCATTGAGTAAGATAT+TGG | - | chr1.3:57719152-57719171 | MS.gene44039:CDS | 30.0% |
!! | ATGATTTTTGATACTAGCCT+TGG | + | chr1.3:57719434-57719453 | None:intergenic | 30.0% |
!! | CGAATTTCATTTTGATATCC+AGG | - | chr1.3:57719252-57719271 | MS.gene44039:CDS | 30.0% |
!!! | GATGCTCTAAAATGTTTTCA+CGG | - | chr1.3:57720472-57720491 | MS.gene44039:intron | 30.0% |
!!! | TTAAGCACACTTTTTTTTCC+TGG | - | chr1.3:57721205-57721224 | MS.gene44039:intron | 30.0% |
!!! | TTGTATGGATTGGAATTTTG+TGG | - | chr1.3:57719202-57719221 | MS.gene44039:CDS | 30.0% |
AAAAGAAGATGAACCATCCA+TGG | + | chr1.3:57719843-57719862 | None:intergenic | 35.0% | |
AAAGCGAAACAAGTAAGTTG+TGG | - | chr1.3:57720590-57720609 | MS.gene44039:CDS | 35.0% | |
AACATCCAAACAGATCCAAA+AGG | - | chr1.3:57720294-57720313 | MS.gene44039:CDS | 35.0% | |
AAGAGAATCTCTCAGTAGTT+GGG | + | chr1.3:57721074-57721093 | None:intergenic | 35.0% | |
AAGGCCTAAATGCAATGAAT+TGG | - | chr1.3:57721994-57722013 | MS.gene44039:CDS | 35.0% | |
AATATCAACATGACTGACCA+TGG | + | chr1.3:57719654-57719673 | None:intergenic | 35.0% | |
AGAGAAAAGTGGATGAAAAG+AGG | - | chr1.3:57719127-57719146 | MS.gene44039:CDS | 35.0% | |
ATGATTGAGAACATGGAAAC+TGG | + | chr1.3:57721868-57721887 | None:intergenic | 35.0% | |
ATTGCTTCTGAGCAAGAAAT+TGG | - | chr1.3:57721797-57721816 | MS.gene44039:CDS | 35.0% | |
CAGTATAATACTTGCCTGTA+AGG | + | chr1.3:57720757-57720776 | None:intergenic | 35.0% | |
CCTCAAAGATGATTTCAAAG+AGG | - | chr1.3:57721673-57721692 | MS.gene44039:intron | 35.0% | |
CTAAGTCAGATTCAGTTGAT+GGG | - | chr1.3:57718879-57718898 | MS.gene44039:CDS | 35.0% | |
CTTACAGGCAAGTATTATAC+TGG | - | chr1.3:57720755-57720774 | MS.gene44039:intron | 35.0% | |
GAAAAACAACGTCAGAGTTT+AGG | - | chr1.3:57721548-57721567 | MS.gene44039:CDS | 35.0% | |
GAGATTTCTGCAAAAGTAGT+TGG | + | chr1.3:57720274-57720293 | None:intergenic | 35.0% | |
GAGTATGTTGGAAGTTTACA+TGG | - | chr1.3:57719874-57719893 | MS.gene44039:intron | 35.0% | |
GATTAGCATATTTAGACGTG+GGG | - | chr1.3:57720552-57720571 | MS.gene44039:CDS | 35.0% | |
GCAGGAATTGAAGAAACAAA+AGG | - | chr1.3:57721484-57721503 | MS.gene44039:intron | 35.0% | |
GTAGACTTCTTAGATGCTTT+AGG | + | chr1.3:57721710-57721729 | None:intergenic | 35.0% | |
TACCATGGGTACTTCTTTAT+TGG | + | chr1.3:57721389-57721408 | None:intergenic | 35.0% | |
TCATGAAATACGTAAGGTGA+TGG | - | chr1.3:57721262-57721281 | MS.gene44039:intron | 35.0% | |
TCCATTGCAGATCTTAGAAT+CGG | + | chr1.3:57719575-57719594 | None:intergenic | 35.0% | |
TCTAAGTCAGATTCAGTTGA+TGG | - | chr1.3:57718878-57718897 | MS.gene44039:CDS | 35.0% | |
TCTCAGATTTGAATCTGATG+AGG | + | chr1.3:57722056-57722075 | None:intergenic | 35.0% | |
TGGAAACTGGATTGAATTTC+TGG | + | chr1.3:57721855-57721874 | None:intergenic | 35.0% | |
TTCAGCCACATATAATCTTC+AGG | - | chr1.3:57721622-57721641 | MS.gene44039:CDS | 35.0% | |
TTGCTTCTGAGCAAGAAATT+GGG | - | chr1.3:57721798-57721817 | MS.gene44039:CDS | 35.0% | |
TTTAATTGTCTAGCCGTCTT+AGG | + | chr1.3:57720824-57720843 | None:intergenic | 35.0% | |
TTTAGGCCTTTCTGTATGAA+TGG | + | chr1.3:57721984-57722003 | None:intergenic | 35.0% | |
! | AAAAGGATTGGTGGAAATTG+AGG | - | chr1.3:57720311-57720330 | MS.gene44039:CDS | 35.0% |
! | AAAGGATTGGTGGAAATTGA+GGG | - | chr1.3:57720312-57720331 | MS.gene44039:CDS | 35.0% |
! | AGGATTAGCATATTTAGACG+TGG | - | chr1.3:57720550-57720569 | MS.gene44039:CDS | 35.0% |
! | AGTGTTTTGTAGAATTCGAC+CGG | - | chr1.3:57719284-57719303 | MS.gene44039:CDS | 35.0% |
! | CAACTTACTTGTTTCGCTTT+TGG | + | chr1.3:57720590-57720609 | None:intergenic | 35.0% |
! | GGATTAGCATATTTAGACGT+GGG | - | chr1.3:57720551-57720570 | MS.gene44039:CDS | 35.0% |
! | TCAATTTCCACCAATCCTTT+TGG | + | chr1.3:57720312-57720331 | None:intergenic | 35.0% |
!! | ATTCTAAGATCTGCAATGGA+CGG | - | chr1.3:57719575-57719594 | MS.gene44039:CDS | 35.0% |
!! | CCTCTTTGAAATCATCTTTG+AGG | + | chr1.3:57721676-57721695 | None:intergenic | 35.0% |
!! | CTTAGATGCTTTAGGAGTTT+CGG | + | chr1.3:57721702-57721721 | None:intergenic | 35.0% |
AACAGATCCAAAAGGATTGG+TGG | - | chr1.3:57720302-57720321 | MS.gene44039:CDS | 40.0% | |
AAGTTGTGGATGGTTGATCT+TGG | - | chr1.3:57720604-57720623 | MS.gene44039:CDS | 40.0% | |
AAGTTTACATGGGCAATGTC+AGG | - | chr1.3:57719885-57719904 | MS.gene44039:intron | 40.0% | |
AATTCTGAACCTGTATCAGC+TGG | - | chr1.3:57719330-57719349 | MS.gene44039:CDS | 40.0% | |
ACAACAAGGGTAGAAGATTC+AGG | - | chr1.3:57720382-57720401 | MS.gene44039:intron | 40.0% | |
ACAGTTGAACTCATGAATCG+AGG | + | chr1.3:57721758-57721777 | None:intergenic | 40.0% | |
ACAGTTTCGACTGAGAAACT+TGG | + | chr1.3:57721435-57721454 | None:intergenic | 40.0% | |
ACTGAATTGGAGACACTTCT+TGG | + | chr1.3:57721734-57721753 | None:intergenic | 40.0% | |
AGAGGACTAACACTTGATGA+AGG | - | chr1.3:57720658-57720677 | MS.gene44039:intron | 40.0% | |
AGTGAACGGTTGCTAAAAAC+TGG | - | chr1.3:57720631-57720650 | MS.gene44039:CDS | 40.0% | |
AGTTTACATGGGCAATGTCA+GGG | - | chr1.3:57719886-57719905 | MS.gene44039:intron | 40.0% | |
ATATTCCTGTAAAGGTGGGT+TGG | - | chr1.3:57720104-57720123 | MS.gene44039:intron | 40.0% | |
ATTGTGCTAAAGCCAAATGG+TGG | - | chr1.3:57720358-57720377 | MS.gene44039:CDS | 40.0% | |
CAACTACTGAGAGATTCTCT+TGG | - | chr1.3:57721073-57721092 | MS.gene44039:CDS | 40.0% | |
CAAGAGAATCTCTCAGTAGT+TGG | + | chr1.3:57721075-57721094 | None:intergenic | 40.0% | |
CCAAACAGATCCAAAAGGAT+TGG | - | chr1.3:57720299-57720318 | MS.gene44039:CDS | 40.0% | |
CGAAACAAGTAAGTTGTGGA+TGG | - | chr1.3:57720594-57720613 | MS.gene44039:CDS | 40.0% | |
CGTTATGTCGTCATAGAAGA+AGG | - | chr1.3:57722080-57722099 | MS.gene44039:CDS | 40.0% | |
CTGATTGTGCTAAAGCCAAA+TGG | - | chr1.3:57720355-57720374 | MS.gene44039:CDS | 40.0% | |
GAACTTAACCCGAATTCTCT+CGG | + | chr1.3:57719358-57719377 | None:intergenic | 40.0% | |
GACGGCTAGACAATTAAAGT+AGG | - | chr1.3:57720826-57720845 | MS.gene44039:intron | 40.0% | |
GATGAAAATTATGGAGCTCG+AGG | - | chr1.3:57721508-57721527 | MS.gene44039:CDS | 40.0% | |
GCAATATTGCGAAGTTCAAC+TGG | - | chr1.3:57721914-57721933 | MS.gene44039:intron | 40.0% | |
GTGCATGTGCAAATGTGATA+TGG | - | chr1.3:57721170-57721189 | MS.gene44039:intron | 40.0% | |
GTTGTTGTAGGGTTGTTGTA+TGG | - | chr1.3:57719187-57719206 | MS.gene44039:CDS | 40.0% | |
TCGACTGAGAAACTTGGTTT+AGG | + | chr1.3:57721429-57721448 | None:intergenic | 40.0% | |
TCGCAAACATCTTCTTCAGA+CGG | + | chr1.3:57721319-57721338 | None:intergenic | 40.0% | |
TCTTCAGGAAAGTGATGACT+TGG | - | chr1.3:57721637-57721656 | MS.gene44039:CDS | 40.0% | |
TGAGTTCAACTGTTGCTAGT+CGG | - | chr1.3:57721765-57721784 | MS.gene44039:CDS | 40.0% | |
TGCTTCTGAGCAAGAAATTG+GGG | - | chr1.3:57721799-57721818 | MS.gene44039:CDS | 40.0% | |
TGTAGGGTTGTTGTATGGAT+TGG | - | chr1.3:57719192-57719211 | MS.gene44039:CDS | 40.0% | |
TGTGGTCTACAAGATTGTCT+GGG | + | chr1.3:57719923-57719942 | None:intergenic | 40.0% | |
TTCATCAAGTGTTAGTCCTC+TGG | + | chr1.3:57720659-57720678 | None:intergenic | 40.0% | |
TTGACGAAAGAGCTCTTCAA+GGG | + | chr1.3:57719816-57719835 | None:intergenic | 40.0% | |
TTGCGAAGTTCAACTGGAAT+TGG | - | chr1.3:57721920-57721939 | MS.gene44039:intron | 40.0% | |
! | AAAACAAATTTTGTCGCCGC+AGG | + | chr1.3:57720010-57720029 | None:intergenic | 40.0% |
! | AATGTGTGCGTTTTCGCTTA+CGG | - | chr1.3:57719602-57719621 | MS.gene44039:CDS | 40.0% |
! | AGCTCATTCTTTTGTTGCTC+AGG | + | chr1.3:57718947-57718966 | None:intergenic | 40.0% |
! | CCAATCCTTTTGGATCTGTT+TGG | + | chr1.3:57720302-57720321 | None:intergenic | 40.0% |
! | CTCTTTTCGGTCAAATGATC+CGG | + | chr1.3:57719306-57719325 | None:intergenic | 40.0% |
! | GAGAGAATTCGGGTTAAGTT+CGG | - | chr1.3:57719357-57719376 | MS.gene44039:CDS | 40.0% |
! | GTAATTTGTCTTGGAGACTC+TGG | - | chr1.3:57720244-57720263 | MS.gene44039:CDS | 40.0% |
! | GTTTTGTGCAGAAGAAGTTG+AGG | - | chr1.3:57719089-57719108 | MS.gene44039:CDS | 40.0% |
!! | AGCACCGAATTTTACTGATG+TGG | - | chr1.3:57719490-57719509 | MS.gene44039:intron | 40.0% |
!! | ATCATCTTTGAGGCTAGTAG+AGG | + | chr1.3:57721666-57721685 | None:intergenic | 40.0% |
!! | GTCCAATAAAGAAGTACCCA+TGG | - | chr1.3:57721384-57721403 | MS.gene44039:intron | 40.0% |
AAAGGTTACCCATTTGCCAG+AGG | + | chr1.3:57719950-57719969 | None:intergenic | 45.0% | |
AGCCAAATGGTGGTACAACA+AGG | - | chr1.3:57720368-57720387 | MS.gene44039:CDS | 45.0% | |
AGGCATCAAGCAGATCACAT+TGG | - | chr1.3:57720430-57720449 | MS.gene44039:intron | 45.0% | |
ATGGTACAAATGAGCAGCCA+GGG | - | chr1.3:57719777-57719796 | MS.gene44039:intron | 45.0% | |
ATTGTCCAACCCACCTTTAC+AGG | + | chr1.3:57720112-57720131 | None:intergenic | 45.0% | |
ATTTAGACGTGGGGATACCT+CGG | - | chr1.3:57720561-57720580 | MS.gene44039:CDS | 45.0% | |
CACAGGAAAGACATTCACCA+TGG | - | chr1.3:57719634-57719653 | MS.gene44039:CDS | 45.0% | |
CAGAAGAAGTTGAGGAACTG+AGG | - | chr1.3:57719097-57719116 | MS.gene44039:CDS | 45.0% | |
CGCAAACATCTTCTTCAGAC+GGG | + | chr1.3:57721318-57721337 | None:intergenic | 45.0% | |
CTCATTTACGTTAGTCCACG+AGG | + | chr1.3:57720412-57720431 | None:intergenic | 45.0% | |
CTTGACGAAAGAGCTCTTCA+AGG | + | chr1.3:57719817-57719836 | None:intergenic | 45.0% | |
GCCAAATGGTGGTACAACAA+GGG | - | chr1.3:57720369-57720388 | MS.gene44039:CDS | 45.0% | |
GCTTCTGAGCAAGAAATTGG+GGG | - | chr1.3:57721800-57721819 | MS.gene44039:CDS | 45.0% | |
GTGTGGTCTACAAGATTGTC+TGG | + | chr1.3:57719924-57719943 | None:intergenic | 45.0% | |
TATGCGGTTTACGCCTAAGA+CGG | - | chr1.3:57720808-57720827 | MS.gene44039:intron | 45.0% | |
TCAGTGAAAACCGTCGAAAC+CGG | + | chr1.3:57718911-57718930 | None:intergenic | 45.0% | |
TCTTTCTCTTCAGAGCTGCA+AGG | + | chr1.3:57720723-57720742 | None:intergenic | 45.0% | |
TTGATCTTGGAGGCAGTGAA+CGG | - | chr1.3:57720617-57720636 | MS.gene44039:CDS | 45.0% | |
TTGCTAAAAACTGGAGCCAG+AGG | - | chr1.3:57720640-57720659 | MS.gene44039:intron | 45.0% | |
TTGTGGATGGTTGATCTTGG+AGG | - | chr1.3:57720607-57720626 | MS.gene44039:CDS | 45.0% | |
TTTCCTCAAGAAGCAAGCCA+AGG | - | chr1.3:57719414-57719433 | MS.gene44039:CDS | 45.0% | |
TTTCGTCAAGCATCCATGGA+TGG | - | chr1.3:57719827-57719846 | MS.gene44039:intron | 45.0% | |
! | ACCCTTGTTGTACCACCATT+TGG | + | chr1.3:57720373-57720392 | None:intergenic | 45.0% |
! | AGAATTCGGGTTAAGTTCGG+AGG | - | chr1.3:57719360-57719379 | MS.gene44039:CDS | 45.0% |
! | CTCGTGGACTAACGTAAATG+AGG | - | chr1.3:57720410-57720429 | MS.gene44039:intron | 45.0% |
! | GTTTTCGCTTACGGTCAAAC+AGG | - | chr1.3:57719611-57719630 | MS.gene44039:CDS | 45.0% |
! | TCGACGGTTTTCACTGATGT+TGG | - | chr1.3:57718914-57718933 | MS.gene44039:CDS | 45.0% |
!! | AGAGGTGTCATGTACCTTAC+AGG | - | chr1.3:57720740-57720759 | MS.gene44039:intron | 45.0% |
!! | CATGAATCGAGGCACTGAAT+TGG | + | chr1.3:57721747-57721766 | None:intergenic | 45.0% |
!! | GCCGATTCTAAGATCTGCAA+TGG | - | chr1.3:57719571-57719590 | MS.gene44039:CDS | 45.0% |
!! | TTCAGTTGATGGGTCGTTAC+CGG | - | chr1.3:57718889-57718908 | MS.gene44039:CDS | 45.0% |
!! | TTGCAGCTCTGAAGAGAAAG+AGG | - | chr1.3:57720722-57720741 | MS.gene44039:intron | 45.0% |
!! | AATCAAATATAATTAAAATT+GGG | + | chr1.3:57719468-57719487 | None:intergenic | 5.0% |
AGCTGGATCCGAGAGAATTC+GGG | - | chr1.3:57719347-57719366 | MS.gene44039:CDS | 50.0% | |
CAAAACACTCGAATGCTCCC+TGG | + | chr1.3:57719273-57719292 | None:intergenic | 50.0% | |
CACACCAACCTCTGGCAAAT+GGG | - | chr1.3:57719939-57719958 | MS.gene44039:intron | 50.0% | |
CAGCTGGATCCGAGAGAATT+CGG | - | chr1.3:57719346-57719365 | MS.gene44039:CDS | 50.0% | |
CGTAGCTCCTCGAAGTACAA+CGG | - | chr1.3:57722027-57722046 | MS.gene44039:CDS | 50.0% | |
GAAGATTCAGGTCAACCTCG+TGG | - | chr1.3:57720394-57720413 | MS.gene44039:intron | 50.0% | |
GAGGCTGAAGCAGAGAAAAG+TGG | - | chr1.3:57719116-57719135 | MS.gene44039:CDS | 50.0% | |
GAGGTAACCGTTGTACTTCG+AGG | + | chr1.3:57722037-57722056 | None:intergenic | 50.0% | |
GATGGTACAAATGAGCAGCC+AGG | - | chr1.3:57719776-57719795 | MS.gene44039:intron | 50.0% | |
GCTCTTTCGTCAAGCATCCA+TGG | - | chr1.3:57719823-57719842 | MS.gene44039:intron | 50.0% | |
GGACAAAACGCGCACAGAAA+AGG | + | chr1.3:57719989-57720008 | None:intergenic | 50.0% | |
GGAGCTCGAGGAAGACATTA+AGG | - | chr1.3:57721520-57721539 | MS.gene44039:CDS | 50.0% | |
GGGTTAAGTTCGGAGGAACA+AGG | - | chr1.3:57719367-57719386 | MS.gene44039:CDS | 50.0% | |
GTTACCCATTTGCCAGAGGT+TGG | + | chr1.3:57719946-57719965 | None:intergenic | 50.0% | |
TTGTAGACCACACCAACCTC+TGG | - | chr1.3:57719931-57719950 | MS.gene44039:intron | 50.0% | |
! | TACGTAAGGTGATGGCTCGA+AGG | - | chr1.3:57721270-57721289 | MS.gene44039:intron | 50.0% |
!! | TAGCCTTGGCTTGCTTCTTG+AGG | + | chr1.3:57719420-57719439 | None:intergenic | 50.0% |
!!! | TGTTTCGCTTTTGGCTTCCG+AGG | + | chr1.3:57720581-57720600 | None:intergenic | 50.0% |
AGGGCACGAGGAATAATCCC+TGG | + | chr1.3:57719797-57719816 | None:intergenic | 55.0% | |
CAACTGTTGCTAGTCGGCAC+AGG | - | chr1.3:57721771-57721790 | MS.gene44039:CDS | 55.0% | |
CCACACCAACCTCTGGCAAA+TGG | - | chr1.3:57719938-57719957 | MS.gene44039:intron | 55.0% | |
CTCTCGGATCCAGCTGATAC+AGG | + | chr1.3:57719342-57719361 | None:intergenic | 55.0% | |
GCTTACGGTCAAACAGGCAC+AGG | - | chr1.3:57719617-57719636 | MS.gene44039:CDS | 55.0% | |
! | AAGAGCTCTTCAAGGGCACG+AGG | + | chr1.3:57719809-57719828 | None:intergenic | 55.0% |
! | TCTGTGCGCGTTTTGTCCTG+CGG | - | chr1.3:57719991-57720010 | MS.gene44039:intron | 55.0% |
!! | CCATTTGCCAGAGGTTGGTG+TGG | + | chr1.3:57719941-57719960 | None:intergenic | 55.0% |
!! | TGGGTCGTTACCGGTTTCGA+CGG | - | chr1.3:57718898-57718917 | MS.gene44039:CDS | 55.0% |
GGGCAATGTCAGGGATCTGC+TGG | - | chr1.3:57719895-57719914 | MS.gene44039:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 57718818 | 57722120 | 57718818 | ID=MS.gene44039 |
chr1.3 | mRNA | 57718818 | 57722120 | 57718818 | ID=MS.gene44039.t1;Parent=MS.gene44039 |
chr1.3 | exon | 57721946 | 57722120 | 57721946 | ID=MS.gene44039.t1.exon1;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57721946 | 57722120 | 57721946 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57721755 | 57721838 | 57721755 | ID=MS.gene44039.t1.exon2;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57721755 | 57721838 | 57721755 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57721503 | 57721664 | 57721503 | ID=MS.gene44039.t1.exon3;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57721503 | 57721664 | 57721503 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57721283 | 57721389 | 57721283 | ID=MS.gene44039.t1.exon4;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57721283 | 57721389 | 57721283 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57720978 | 57721162 | 57720978 | ID=MS.gene44039.t1.exon5;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57720978 | 57721162 | 57720978 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57720487 | 57720651 | 57720487 | ID=MS.gene44039.t1.exon6;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57720487 | 57720651 | 57720487 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57720177 | 57720395 | 57720177 | ID=MS.gene44039.t1.exon7;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57720177 | 57720395 | 57720177 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57719844 | 57719881 | 57719844 | ID=MS.gene44039.t1.exon8;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57719844 | 57719881 | 57719844 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57719533 | 57719660 | 57719533 | ID=MS.gene44039.t1.exon9;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57719533 | 57719660 | 57719533 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
chr1.3 | exon | 57718818 | 57719450 | 57718818 | ID=MS.gene44039.t1.exon10;Parent=MS.gene44039.t1 |
chr1.3 | CDS | 57718818 | 57719450 | 57718818 | ID=cds.MS.gene44039.t1;Parent=MS.gene44039.t1 |
Gene Sequence |
Protein sequence |