Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44094.t1 | XP_003591102.1 | 87.9 | 904 | 104 | 2 | 1 | 904 | 1 | 899 | 0.00E+00 | 1494.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44094.t1 | G7I832 | 87.9 | 904 | 104 | 2 | 1 | 904 | 1 | 899 | 0.0e+00 | 1494.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055572 | MS.gene44094 | 0.93489 | 2.00E-96 | -1.69E-46 |
| MS.gene056035 | MS.gene44094 | 0.921615 | 2.85E-88 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44094.t1 | MTR_1g082840 | 92.826 | 906 | 56 | 3 | 1 | 904 | 1 | 899 | 0.0 | 1644 |
| MS.gene44094.t1 | MTR_1g082840 | 92.384 | 906 | 54 | 4 | 1 | 904 | 1 | 893 | 0.0 | 1629 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44094.t1 | AT1G54920 | 31.410 | 936 | 498 | 24 | 30 | 903 | 26 | 879 | 3.82e-95 | 320 |
| MS.gene44094.t1 | AT1G54920 | 31.045 | 947 | 498 | 26 | 30 | 903 | 26 | 890 | 9.64e-91 | 308 |
| MS.gene44094.t1 | AT1G54920 | 29.419 | 792 | 423 | 22 | 30 | 759 | 26 | 743 | 4.49e-53 | 199 |
| MS.gene44094.t1 | AT1G54920 | 27.716 | 718 | 383 | 22 | 30 | 685 | 26 | 669 | 1.33e-29 | 126 |
Find 203 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATGTTGCGGCTCTTTC+GGG | 0.148308 | 1.3:+58407155 | MS.gene44094:CDS |
| TCCTGGGCGAATTGGGTTTC+AGG | 0.163962 | 1.3:-58406740 | None:intergenic |
| AGATGATTCGTGGGAATTTA+AGG | 0.176449 | 1.3:+58406874 | MS.gene44094:CDS |
| ACAATCAGACTGTTCTAATT+TGG | 0.181469 | 1.3:-58406972 | None:intergenic |
| TCAAGATGTTGCGGCTCTTT+CGG | 0.214221 | 1.3:+58407154 | MS.gene44094:CDS |
| ATCATCACTGTTATCCAAAT+TGG | 0.216054 | 1.3:-58406681 | None:intergenic |
| TGGCTTCTGATAATATAAAT+TGG | 0.221125 | 1.3:-58404414 | None:intergenic |
| TTATTCATCAGGGCTAAATT+TGG | 0.229118 | 1.3:+58409237 | MS.gene44094:intron |
| AATATGTTCAACCAAACTTT+TGG | 0.236762 | 1.3:+58405685 | MS.gene44094:CDS |
| AAACTCATGAATGTACTTAA+TGG | 0.236872 | 1.3:-58408620 | None:intergenic |
| GCTACCAATCCAAAGATTAA+TGG | 0.255549 | 1.3:+58404488 | MS.gene44094:CDS |
| CCAAAGGTTGATTCTCAAAA+TGG | 0.264749 | 1.3:+58404434 | MS.gene44094:CDS |
| CGAATTATCAGGCTCCAATT+TGG | 0.267630 | 1.3:+58406667 | MS.gene44094:CDS |
| AAATAAACTTGTACAATCTA+TGG | 0.286314 | 1.3:-58408479 | None:intergenic |
| TTCTCCAGTCCATTAATCTT+TGG | 0.286528 | 1.3:-58404497 | None:intergenic |
| CTCTTCTACCTCCGTTGATT+GGG | 0.286826 | 1.3:+58404115 | MS.gene44094:CDS |
| CCAATGCAGAACAACTTTAA+TGG | 0.287356 | 1.3:+58406527 | MS.gene44094:CDS |
| GATTTCGGCGTGATTGTTTC+CGG | 0.289334 | 1.3:-58406053 | None:intergenic |
| AGCTCTTGAGGTGGAAATTC+AGG | 0.290361 | 1.3:+58407196 | MS.gene44094:CDS |
| GTGCAGATTCCTGGGCGAAT+TGG | 0.293549 | 1.3:-58406748 | None:intergenic |
| CAAATTGGAGCCTGATAATT+CGG | 0.308500 | 1.3:-58406666 | None:intergenic |
| TATCTATCAATGACTTGATA+TGG | 0.312764 | 1.3:+58406564 | MS.gene44094:CDS |
| GGTTGGTGTTGGTGCTTTGT+TGG | 0.320033 | 1.3:+58405534 | MS.gene44094:CDS |
| GTAGAAGAGAATTGTTGATT+TGG | 0.320795 | 1.3:-58404101 | None:intergenic |
| AATCAACATTTGTATTGGTT+GGG | 0.322862 | 1.3:-58406093 | None:intergenic |
| CAATCTAACGGGCGGGGCTT+TGG | 0.332122 | 1.3:+58405968 | MS.gene44094:CDS |
| TGCAGATTCCTGGGCGAATT+GGG | 0.334647 | 1.3:-58406747 | None:intergenic |
| TCACTAACTTCCCAAAAGTT+TGG | 0.335594 | 1.3:-58405696 | None:intergenic |
| AAGGATGCAGACACAGAAAT+AGG | 0.349705 | 1.3:+58406139 | MS.gene44094:CDS |
| AACTAAATCAACATTTGTAT+TGG | 0.351274 | 1.3:-58406098 | None:intergenic |
| TCTCTTCTACCTCCGTTGAT+TGG | 0.357644 | 1.3:+58404114 | MS.gene44094:CDS |
| AAAAGTGAATCAAATGAAAC+TGG | 0.362054 | 1.3:+58405652 | MS.gene44094:CDS |
| TCATCAAAGTTCACATTTCT+CGG | 0.362746 | 1.3:-58407690 | None:intergenic |
| AGAATTCTGCAGTTGGGATC+AGG | 0.372531 | 1.3:+58408123 | MS.gene44094:CDS |
| TGAAACATGGTGCTTATATC+TGG | 0.372799 | 1.3:+58408208 | MS.gene44094:CDS |
| AATCTAATTATCTTACTATA+TGG | 0.375362 | 1.3:+58408154 | MS.gene44094:CDS |
| GCTATTCCTCTTTCAATCTT+CGG | 0.380199 | 1.3:+58404263 | MS.gene44094:CDS |
| GATTGGGGAGGTTTCGTCAA+TGG | 0.387060 | 1.3:+58404131 | MS.gene44094:CDS |
| GGCTATTACACTCGTTCAAA+AGG | 0.387490 | 1.3:-58408504 | None:intergenic |
| CAGTTGTCAGCCTTGCCTGC+TGG | 0.391026 | 1.3:+58408694 | MS.gene44094:CDS |
| AGAACAAACAAAGGCAATCT+TGG | 0.393277 | 1.3:-58408178 | None:intergenic |
| AATAGCCTATGGTTGGCTTC+AGG | 0.393711 | 1.3:+58408520 | MS.gene44094:CDS |
| AAATCAACATTTGTATTGGT+TGG | 0.396398 | 1.3:-58406094 | None:intergenic |
| TTTATTTCCCACTGATATAG+AGG | 0.398047 | 1.3:+58405880 | MS.gene44094:CDS |
| CAAGTCATTGATAGATAAGT+TGG | 0.399134 | 1.3:-58406558 | None:intergenic |
| GGCAGAAATTGTTGGAGCTT+CGG | 0.400669 | 1.3:+58408423 | MS.gene44094:CDS |
| GGGCTGTGAGATGCAGAAAT+AGG | 0.402417 | 1.3:-58405616 | None:intergenic |
| GCTTTGTTGGATTCATCCCC+TGG | 0.403640 | 1.3:+58405547 | MS.gene44094:CDS |
| ATTAGAACAGTCTGATTGTA+TGG | 0.404879 | 1.3:+58406976 | MS.gene44094:CDS |
| ACTAGCATCAAGGTTGTCTA+TGG | 0.404944 | 1.3:+58407767 | MS.gene44094:CDS |
| TTCGTTTACACGTTTCTGAA+TGG | 0.409186 | 1.3:-58404201 | None:intergenic |
| CCAACTTTGTCAGAAATTCC+AGG | 0.410193 | 1.3:-58405565 | None:intergenic |
| TCGTTTACACGTTTCTGAAT+GGG | 0.412749 | 1.3:-58404200 | None:intergenic |
| TTGCCTGCTGGTTGCATACC+AGG | 0.414091 | 1.3:+58408706 | MS.gene44094:CDS |
| TTGTTCTGCATTGGAGATAC+TGG | 0.416629 | 1.3:-58406518 | None:intergenic |
| GAATTTAAGGATGCTATATC+TGG | 0.416934 | 1.3:+58406887 | MS.gene44094:CDS |
| CTTAGAATGTTCATTTGTAT+CGG | 0.418872 | 1.3:-58406471 | None:intergenic |
| TCAGAGTCATACTTCAAAAC+CGG | 0.430690 | 1.3:+58406034 | MS.gene44094:CDS |
| AAACAATAACTTGAATGTTA+AGG | 0.431274 | 1.3:+58404622 | MS.gene44094:CDS |
| CAGCAGGCAAGGCTGACAAC+TGG | 0.432697 | 1.3:-58408693 | None:intergenic |
| CCATTAAAGTTGTTCTGCAT+TGG | 0.433339 | 1.3:-58406527 | None:intergenic |
| ACCACACTATTACCATGCTT+TGG | 0.434136 | 1.3:-58405514 | None:intergenic |
| CTACCTTGAGGTTCTGAAGA+TGG | 0.435237 | 1.3:-58407045 | None:intergenic |
| GATTCAAGAGGTAGGAACTT+TGG | 0.435348 | 1.3:-58407735 | None:intergenic |
| TATAGAGTGGCAGAAATTGT+TGG | 0.443132 | 1.3:+58408415 | MS.gene44094:CDS |
| CAGAACAACTTTAATGGTCC+TGG | 0.445681 | 1.3:+58406533 | MS.gene44094:CDS |
| TGAACGAGTGTAATAGCCTA+TGG | 0.450578 | 1.3:+58408509 | MS.gene44094:CDS |
| GGATGGATTGCAGACTTCCT+TGG | 0.450987 | 1.3:+58406808 | MS.gene44094:CDS |
| CACAAACCATGGATGTTGTC+AGG | 0.458854 | 1.3:+58408454 | MS.gene44094:CDS |
| TGTCAATCTGTTTGAATCAA+AGG | 0.459005 | 1.3:+58406120 | MS.gene44094:CDS |
| TTAGAATGTTCATTTGTATC+GGG | 0.459346 | 1.3:-58406470 | None:intergenic |
| CACAATCTCATCAATCTAAC+GGG | 0.463317 | 1.3:+58405957 | MS.gene44094:CDS |
| AGAGAATTGTTGATTTGGAA+AGG | 0.463565 | 1.3:-58404096 | None:intergenic |
| ATCAACATTTGTATTGGTTG+GGG | 0.467933 | 1.3:-58406092 | None:intergenic |
| AGTTAGTGAATGCACATTCA+TGG | 0.471958 | 1.3:+58405710 | MS.gene44094:CDS |
| GAATGCGAATGATTTGAATC+AGG | 0.472340 | 1.3:+58404523 | MS.gene44094:CDS |
| GCCAGGATCAAATCAAACTT+TGG | 0.472722 | 1.3:+58405732 | MS.gene44094:CDS |
| GGAATTCAAGTCTGCAGAAT+GGG | 0.474278 | 1.3:+58404592 | MS.gene44094:CDS |
| AAATTGGAGCCTGATAATTC+GGG | 0.478972 | 1.3:-58406665 | None:intergenic |
| TTTGCGAGATTGACGAAGTA+GGG | 0.480307 | 1.3:-58409277 | None:intergenic |
| GTGGGTCAATCTAATAAGTT+CGG | 0.480516 | 1.3:+58409303 | MS.gene44094:CDS |
| CACAATAACTTTGACGCGGA+TGG | 0.480863 | 1.3:+58408574 | MS.gene44094:CDS |
| GGGGAGGTTTCGTCAATGGC+GGG | 0.481648 | 1.3:+58404135 | MS.gene44094:CDS |
| CTTCAGAGCTATGTCATCTC+AGG | 0.482897 | 1.3:+58408655 | MS.gene44094:CDS |
| AACATTAAGAATTCTGCAGT+TGG | 0.483366 | 1.3:+58408116 | MS.gene44094:CDS |
| ACCAAAGTTTGATTTGATCC+TGG | 0.483430 | 1.3:-58405733 | None:intergenic |
| CGTCAATCTCGCAAACTTGT+GGG | 0.483461 | 1.3:+58409285 | MS.gene44094:CDS |
| GAAGAAGACGATGAAAGCTT+TGG | 0.484351 | 1.3:+58404056 | MS.gene44094:CDS |
| TCTCTCAGCTATGGCGGAAG+AGG | 0.485033 | 1.3:+58404034 | None:intergenic |
| GAAACTGTGAATGGATCAAA+GGG | 0.488889 | 1.3:-58404170 | None:intergenic |
| CCTGGAATTTCTGACAAAGT+TGG | 0.490882 | 1.3:+58405565 | MS.gene44094:CDS |
| GAATCAAATGAAACTGGAGC+TGG | 0.494381 | 1.3:+58405658 | MS.gene44094:CDS |
| ATCTCATCAATCTAACGGGC+GGG | 0.495036 | 1.3:+58405961 | MS.gene44094:CDS |
| GCATCTCACAGCCCGCAGCC+AGG | 0.495531 | 1.3:+58405625 | MS.gene44094:CDS |
| CGATCCTCTGAAGTTATTAG+CGG | 0.496712 | 1.3:-58406407 | None:intergenic |
| CTAAATTTGGCAACATGGAA+CGG | 0.497359 | 1.3:+58409250 | MS.gene44094:CDS |
| TAAATTTGGCAACATGGAAC+GGG | 0.497987 | 1.3:+58409251 | MS.gene44094:CDS |
| TTGGAAGAAGCAGAAACAAC+AGG | 0.502353 | 1.3:-58404302 | None:intergenic |
| ACATTAAGAATTCTGCAGTT+GGG | 0.503211 | 1.3:+58408117 | MS.gene44094:CDS |
| TGATCCATTCACAGTTTCAT+CGG | 0.503274 | 1.3:+58404175 | MS.gene44094:CDS |
| TGAGGTTCTGAAGATGGAAC+AGG | 0.503569 | 1.3:-58407039 | None:intergenic |
| TCAGGATGAGGACGAGGATG+AGG | 0.505723 | 1.3:+58404541 | MS.gene44094:CDS |
| TGGGGAGGTTTCGTCAATGG+CGG | 0.508646 | 1.3:+58404134 | MS.gene44094:CDS |
| TGATTTCAATTCTAGTTCCA+AGG | 0.509844 | 1.3:+58405994 | MS.gene44094:CDS |
| GTTTGCGAGATTGACGAAGT+AGG | 0.511121 | 1.3:-58409278 | None:intergenic |
| GTGAATGCACATTCATGGCC+AGG | 0.512403 | 1.3:+58405715 | MS.gene44094:CDS |
| GGTAATAGTGTGGTTGGTGT+TGG | 0.516722 | 1.3:+58405523 | MS.gene44094:CDS |
| CAAAGTTGGTGAGTGGCACT+TGG | 0.517021 | 1.3:+58405579 | MS.gene44094:CDS |
| CATTGGAGATACTGGTGCAT+AGG | 0.517979 | 1.3:-58406510 | None:intergenic |
| AACATTTGTATTGGTTGGGG+AGG | 0.522086 | 1.3:-58406089 | None:intergenic |
| TCGTCAATCTCGCAAACTTG+TGG | 0.523955 | 1.3:+58409284 | MS.gene44094:CDS |
| TCCTCACCGAAGATTGAAAG+AGG | 0.524124 | 1.3:-58404269 | None:intergenic |
| AAGTCTGCAGAATGGGAAGC+TGG | 0.524246 | 1.3:+58404599 | MS.gene44094:CDS |
| CAGTCCATTAATCTTTGGAT+TGG | 0.525856 | 1.3:-58404492 | None:intergenic |
| CAATCCAAAGATTAATGGAC+TGG | 0.527757 | 1.3:+58404493 | MS.gene44094:CDS |
| CCTACAGAATTCAATGAGGA+TGG | 0.530052 | 1.3:+58406791 | MS.gene44094:CDS |
| GAATTCTGCAGTTGGGATCA+GGG | 0.531440 | 1.3:+58408124 | MS.gene44094:CDS |
| ATAGAGGCATTCAATGGTAA+TGG | 0.532182 | 1.3:+58405896 | MS.gene44094:CDS |
| TGAAACTGTGAATGGATCAA+AGG | 0.533660 | 1.3:-58404171 | None:intergenic |
| AAATAGACAGTCTTCACCCT+TGG | 0.534540 | 1.3:-58406011 | None:intergenic |
| TTGCATTTGGTAGGCCGGGA+CGG | 0.535886 | 1.3:+58408053 | MS.gene44094:intron |
| GGATAGATAATAACTGGTCA+TGG | 0.537539 | 1.3:-58408254 | None:intergenic |
| CAGGGCTAAATTTGGCAACA+TGG | 0.539384 | 1.3:+58409245 | MS.gene44094:intron |
| TAGACAACCTTGATGCTAGT+TGG | 0.539608 | 1.3:-58407764 | None:intergenic |
| TCTGATTTGAATGGTGGTGT+TGG | 0.540670 | 1.3:+58404374 | MS.gene44094:CDS |
| ATCAGAATTTAAAACTTCCA+AGG | 0.541914 | 1.3:-58406825 | None:intergenic |
| GGTTGATTCTCAAAATGGAT+CGG | 0.543893 | 1.3:+58404439 | MS.gene44094:CDS |
| TTGAATTGTCAGTTATCACT+GGG | 0.544353 | 1.3:-58409332 | None:intergenic |
| GCTATTACACTCGTTCAAAA+GGG | 0.544947 | 1.3:-58408503 | None:intergenic |
| TCACAATCTCATCAATCTAA+CGG | 0.545941 | 1.3:+58405956 | MS.gene44094:CDS |
| GATTTCAATTCTAGTTCCAA+GGG | 0.546352 | 1.3:+58405995 | MS.gene44094:CDS |
| ATTGGAGATACTGGTGCATA+GGG | 0.548698 | 1.3:-58406509 | None:intergenic |
| TCTTCTACCTCCGTTGATTG+GGG | 0.551291 | 1.3:+58404116 | MS.gene44094:CDS |
| TTGACGCGGATGGCATCTCA+AGG | 0.553383 | 1.3:+58408584 | MS.gene44094:CDS |
| TAATAACTTCAGAGGATCGT+AGG | 0.553389 | 1.3:+58406411 | MS.gene44094:CDS |
| CAGTTATTATCTATCCCAAA+AGG | 0.553845 | 1.3:+58408261 | MS.gene44094:CDS |
| CAGAATACCAACTAGCATCA+AGG | 0.559469 | 1.3:+58407757 | MS.gene44094:CDS |
| CAACTTTGTCAGAAATTCCA+GGG | 0.561317 | 1.3:-58405564 | None:intergenic |
| GGGAATTCAAGTCTGCAGAA+TGG | 0.561502 | 1.3:+58404591 | MS.gene44094:CDS |
| TGCAAAAGTAAAAGCTCTTG+AGG | 0.561816 | 1.3:+58407184 | MS.gene44094:CDS |
| TCTACCTCCGTTGATTGGGG+AGG | 0.565034 | 1.3:+58404119 | MS.gene44094:CDS |
| ACTGATATAGAGGCATTCAA+TGG | 0.566687 | 1.3:+58405890 | MS.gene44094:CDS |
| TGGTATGCAACCAGCAGGCA+AGG | 0.566761 | 1.3:-58408704 | None:intergenic |
| CGGCAAAACTTCACAAACCA+TGG | 0.571804 | 1.3:+58408443 | MS.gene44094:CDS |
| ACCTGAAACCCAATTCGCCC+AGG | 0.572774 | 1.3:+58406739 | MS.gene44094:CDS |
| TCTCATCAATCTAACGGGCG+GGG | 0.575170 | 1.3:+58405962 | MS.gene44094:CDS |
| AAGGTTGAAGCGCCAAAGCA+TGG | 0.575855 | 1.3:+58405502 | MS.gene44094:intron |
| TTAGAAAGCTCAAGATGTTG+CGG | 0.576556 | 1.3:+58407145 | MS.gene44094:intron |
| CAAGTCCTGAAGCCAACCAT+AGG | 0.577926 | 1.3:-58408525 | None:intergenic |
| AAAGTTGGTGAGTGGCACTT+GGG | 0.578107 | 1.3:+58405580 | MS.gene44094:CDS |
| GGTATTCTGATTCAAGAGGT+AGG | 0.584472 | 1.3:-58407743 | None:intergenic |
| GACGGATATAAAATCTGCCA+TGG | 0.585582 | 1.3:+58408071 | MS.gene44094:CDS |
| GTTCAGTATATCTATGCACT+TGG | 0.587375 | 1.3:+58408385 | MS.gene44094:CDS |
| TCGAATAAAAGTAACGGTGG+TGG | 0.588049 | 1.3:+58404335 | MS.gene44094:CDS |
| TGCTTCAACAGAAACACCGT+TGG | 0.588377 | 1.3:-58404225 | None:intergenic |
| GAATGATTTGAATCAGGATG+AGG | 0.589134 | 1.3:+58404529 | MS.gene44094:CDS |
| CGAGTGTAATAGCCTATGGT+TGG | 0.589432 | 1.3:+58408513 | MS.gene44094:CDS |
| AATGGATCTGATTTGAATGG+TGG | 0.590637 | 1.3:+58404368 | MS.gene44094:CDS |
| AATAACTTCAGAGGATCGTA+GGG | 0.591425 | 1.3:+58406412 | MS.gene44094:CDS |
| TTGAATGCCTCTATATCAGT+GGG | 0.594268 | 1.3:-58405887 | None:intergenic |
| TGCATCTTTCAAGAGTTCCA+TGG | 0.595324 | 1.3:-58408088 | None:intergenic |
| GACGAAACCTCCCCAATCAA+CGG | 0.595714 | 1.3:-58404126 | None:intergenic |
| CCATCCTCATTGAATTCTGT+AGG | 0.598152 | 1.3:-58406791 | None:intergenic |
| TTTATATTATCAGAAGCCAA+AGG | 0.598560 | 1.3:+58404418 | MS.gene44094:CDS |
| TGCTTATATCTGGAAGGAAG+CGG | 0.599222 | 1.3:+58408218 | MS.gene44094:CDS |
| AAGTTGGTGAGTGGCACTTG+GGG | 0.599730 | 1.3:+58405581 | MS.gene44094:CDS |
| AATTCTGCAGTTGGGATCAG+GGG | 0.600189 | 1.3:+58408125 | MS.gene44094:CDS |
| ACATGGTGCTTATATCTGGA+AGG | 0.601445 | 1.3:+58408212 | MS.gene44094:CDS |
| TTCTCGAATAAAAGTAACGG+TGG | 0.603271 | 1.3:+58404332 | MS.gene44094:CDS |
| GAGGCATTCAATGGTAATGG+TGG | 0.603637 | 1.3:+58405899 | MS.gene44094:CDS |
| TTTGAATCAGGATGAGGACG+AGG | 0.604085 | 1.3:+58404535 | MS.gene44094:CDS |
| GGATCCGATGAAACTGTGAA+TGG | 0.604883 | 1.3:-58404179 | None:intergenic |
| ATACCTGGTATGCAACCAGC+AGG | 0.606123 | 1.3:-58408709 | None:intergenic |
| AATCAAATGAAACTGGAGCT+GGG | 0.607360 | 1.3:+58405659 | MS.gene44094:CDS |
| ATGGAACCTGACAACATCCA+TGG | 0.607890 | 1.3:-58408460 | None:intergenic |
| TCCTCTTTCAATCTTCGGTG+AGG | 0.609164 | 1.3:+58404268 | MS.gene44094:CDS |
| AAGCATGGTAATAGTGTGGT+TGG | 0.611801 | 1.3:+58405517 | MS.gene44094:CDS |
| AGTTGGTATTCTGATTCAAG+AGG | 0.614131 | 1.3:-58407747 | None:intergenic |
| TGAGATTGTGATGCAAGAGA+TGG | 0.614358 | 1.3:-58405944 | None:intergenic |
| ACTTGGAGAAATTTATAGAG+TGG | 0.614816 | 1.3:+58408402 | MS.gene44094:CDS |
| ATTGAATGCCTCTATATCAG+TGG | 0.615157 | 1.3:-58405888 | None:intergenic |
| TTGATAGATAAGTTGGAACC+AGG | 0.617944 | 1.3:-58406551 | None:intergenic |
| GAGATTGTGATGCAAGAGAT+GGG | 0.622825 | 1.3:-58405943 | None:intergenic |
| ATTGTCAGTTATCACTGGGG+AGG | 0.624111 | 1.3:-58409328 | None:intergenic |
| GAAGCCGCTAATAACTTCAG+AGG | 0.638128 | 1.3:+58406403 | MS.gene44094:intron |
| AATCTCATCAATCTAACGGG+CGG | 0.638987 | 1.3:+58405960 | MS.gene44094:CDS |
| TTTCTGACAAAGTTGGTGAG+TGG | 0.643801 | 1.3:+58405572 | MS.gene44094:CDS |
| GTTCCATCTTCAGAACCTCA+AGG | 0.648354 | 1.3:+58407042 | MS.gene44094:CDS |
| TGTTCTCAAGAGCTGAAACA+TGG | 0.648620 | 1.3:+58408195 | MS.gene44094:CDS |
| TGACGCGGATGGCATCTCAA+GGG | 0.655838 | 1.3:+58408585 | MS.gene44094:CDS |
| CAGCTCTTGAGAACAAACAA+AGG | 0.655927 | 1.3:-58408187 | None:intergenic |
| GTTGAAGCAAACAAAGCTCG+TGG | 0.662321 | 1.3:+58404239 | MS.gene44094:CDS |
| GCCAAAGCATGGTAATAGTG+TGG | 0.663121 | 1.3:+58405513 | MS.gene44094:CDS |
| AGAAATAGGAATAAAACATG+AGG | 0.673697 | 1.3:+58406153 | MS.gene44094:CDS |
| AAAAGTAAAAGCTCTTGAGG+TGG | 0.678052 | 1.3:+58407187 | MS.gene44094:CDS |
| AACTTTGTCAGAAATTCCAG+GGG | 0.681708 | 1.3:-58405563 | None:intergenic |
| AATTGGAGCCTGATAATTCG+GGG | 0.683728 | 1.3:-58406664 | None:intergenic |
| ATTGGAGCCTGATAATTCGG+GGG | 0.708699 | 1.3:-58406663 | None:intergenic |
| TCATCCTACAGAATTCAATG+AGG | 0.717858 | 1.3:+58406787 | MS.gene44094:CDS |
| AAACGTGTAAACGAAACCAA+CGG | 0.720160 | 1.3:+58404209 | MS.gene44094:CDS |
| AAATCACAATAACTTTGACG+CGG | 0.726332 | 1.3:+58408570 | MS.gene44094:CDS |
| GAAACCTCCCCAATCAACGG+AGG | 0.747802 | 1.3:-58404123 | None:intergenic |
| TGAATTGTCAGTTATCACTG+GGG | 0.762934 | 1.3:-58409331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATGATTTGTTAAA+TGG | + | chr1.3:58404750-58404769 | MS.gene44094:intron | 10.0% |
| !! | AATCTAATTATCTTACTATA+TGG | + | chr1.3:58408154-58408173 | MS.gene44094:CDS | 15.0% |
| !! | ATACTAAATCATATGTAAAT+TGG | - | chr1.3:58409065-58409084 | None:intergenic | 15.0% |
| !! | CATAATTAGCATATAAATTT+AGG | - | chr1.3:58407554-58407573 | None:intergenic | 15.0% |
| !! | CTAAATTTATATGCTAATTA+TGG | + | chr1.3:58407552-58407571 | MS.gene44094:intron | 15.0% |
| !!! | TAATCTGTGTTTATTTTTAA+AGG | + | chr1.3:58405483-58405502 | MS.gene44094:intron | 15.0% |
| !!! | TCATGTAATTAATTTTCATT+TGG | + | chr1.3:58404917-58404936 | MS.gene44094:intron | 15.0% |
| !!! | TTATGTTTTAGTAATATATG+AGG | + | chr1.3:58405350-58405369 | MS.gene44094:intron | 15.0% |
| !!! | TTCATCTTTTCATTTAAAAA+CGG | + | chr1.3:58409151-58409170 | MS.gene44094:intron | 15.0% |
| !!! | TTGAAAGTTATGTTTTTAAT+AGG | + | chr1.3:58408781-58408800 | MS.gene44094:intron | 15.0% |
| !!! | TTTTTTATGAATCAATCTTA+TGG | + | chr1.3:58406301-58406320 | MS.gene44094:intron | 15.0% |
| !! | AAAAATTGGATAATACTTAC+TGG | + | chr1.3:58407094-58407113 | MS.gene44094:intron | 20.0% |
| !! | AAACAATAACTTGAATGTTA+AGG | + | chr1.3:58404622-58404641 | MS.gene44094:CDS | 20.0% |
| !! | AAATAAACTTGTACAATCTA+TGG | - | chr1.3:58408482-58408501 | None:intergenic | 20.0% |
| !! | AACTAAATCAACATTTGTAT+TGG | - | chr1.3:58406101-58406120 | None:intergenic | 20.0% |
| !! | ATATATTCAGACATAAAGTA+TGG | + | chr1.3:58405099-58405118 | MS.gene44094:intron | 20.0% |
| !! | ATATGCTAATTATGGTTTAT+AGG | + | chr1.3:58407560-58407579 | MS.gene44094:intron | 20.0% |
| !! | CATATGATTTAGTATCTATT+TGG | + | chr1.3:58409070-58409089 | MS.gene44094:intron | 20.0% |
| !! | GCTAATTGACAAAAAAAAAA+TGG | + | chr1.3:58404856-58404875 | MS.gene44094:intron | 20.0% |
| !! | GTTCTTTCTTTCATAAAAAT+TGG | + | chr1.3:58407080-58407099 | MS.gene44094:intron | 20.0% |
| !! | TTCATAATAGCTTAAGAAAA+CGG | - | chr1.3:58405152-58405171 | None:intergenic | 20.0% |
| !! | TTTATTCGAGAAAAAATCAT+TGG | - | chr1.3:58404324-58404343 | None:intergenic | 20.0% |
| !!! | AAAAAATGGAAACTAGTTTT+AGG | + | chr1.3:58404870-58404889 | MS.gene44094:intron | 20.0% |
| !!! | AAAATTTGATAACCATAAAC+CGG | - | chr1.3:58407234-58407253 | None:intergenic | 20.0% |
| !!! | ACTAAACATAACTGATTTTA+GGG | + | chr1.3:58407895-58407914 | MS.gene44094:intron | 20.0% |
| !!! | ATGATTTTGATGATGATTTT+GGG | + | chr1.3:58406699-58406718 | MS.gene44094:CDS | 20.0% |
| !!! | CTTTTGTTTTTTATCGTAAT+GGG | + | chr1.3:58405446-58405465 | MS.gene44094:intron | 20.0% |
| !!! | GGAAATAAATTATCCTTTTT+TGG | - | chr1.3:58405869-58405888 | None:intergenic | 20.0% |
| !!! | GTCATATTTTATATATCGTA+GGG | + | chr1.3:58406193-58406212 | MS.gene44094:intron | 20.0% |
| !!! | GTGTCTAATATTTTTTGTTA+GGG | + | chr1.3:58407254-58407273 | MS.gene44094:intron | 20.0% |
| !!! | TAAAGCATAAAGCATTTATA+GGG | - | chr1.3:58405306-58405325 | None:intergenic | 20.0% |
| !!! | TACTAAACATAACTGATTTT+AGG | + | chr1.3:58407894-58407913 | MS.gene44094:intron | 20.0% |
| !!! | TCAAGACATATTTTATCAAT+GGG | - | chr1.3:58408765-58408784 | None:intergenic | 20.0% |
| !!! | TGTAATTAATTTTCATTTGG+AGG | + | chr1.3:58404920-58404939 | MS.gene44094:intron | 20.0% |
| !!! | TGTCATATTTTATATATCGT+AGG | + | chr1.3:58406192-58406211 | MS.gene44094:intron | 20.0% |
| !!! | TGTGTCTAATATTTTTTGTT+AGG | + | chr1.3:58407253-58407272 | MS.gene44094:intron | 20.0% |
| !!! | TTCAAGACATATTTTATCAA+TGG | - | chr1.3:58408766-58408785 | None:intergenic | 20.0% |
| !!! | TTGGTTTGATTTTTTAAAAG+AGG | + | chr1.3:58406222-58406241 | MS.gene44094:intron | 20.0% |
| !!! | TTTTTCTCGAATAAAAGTAA+CGG | + | chr1.3:58404329-58404348 | MS.gene44094:CDS | 20.0% |
| ! | AAAAGTGAATCAAATGAAAC+TGG | + | chr1.3:58405652-58405671 | MS.gene44094:CDS | 25.0% |
| ! | AAACTCATGAATGTACTTAA+TGG | - | chr1.3:58408623-58408642 | None:intergenic | 25.0% |
| ! | AATACTTGTCGAAAAATGTA+TGG | - | chr1.3:58408871-58408890 | None:intergenic | 25.0% |
| ! | AATTAGCTAAAAATAGCTCA+TGG | + | chr1.3:58405183-58405202 | MS.gene44094:intron | 25.0% |
| ! | ACTTGAATGTTAAGGTAAAT+TGG | + | chr1.3:58404630-58404649 | MS.gene44094:intron | 25.0% |
| ! | AGAAATAGGAATAAAACATG+AGG | + | chr1.3:58406153-58406172 | MS.gene44094:CDS | 25.0% |
| ! | AGTTAATGTTGTTGTGAAAT+TGG | + | chr1.3:58407490-58407509 | MS.gene44094:intron | 25.0% |
| ! | CAAAACACCTCTAATATATA+AGG | + | chr1.3:58408977-58408996 | MS.gene44094:intron | 25.0% |
| ! | CCATTACGATAAAAAACAAA+AGG | - | chr1.3:58405448-58405467 | None:intergenic | 25.0% |
| ! | CTGTAAAAGATAAGATTAGT+AGG | - | chr1.3:58407601-58407620 | None:intergenic | 25.0% |
| ! | CTTAGAATGTTCATTTGTAT+CGG | - | chr1.3:58406474-58406493 | None:intergenic | 25.0% |
| ! | TATCTATCAATGACTTGATA+TGG | + | chr1.3:58406564-58406583 | MS.gene44094:CDS | 25.0% |
| ! | TGGCTTCTGATAATATAAAT+TGG | - | chr1.3:58404417-58404436 | None:intergenic | 25.0% |
| ! | TTAGAATGTTCATTTGTATC+GGG | - | chr1.3:58406473-58406492 | None:intergenic | 25.0% |
| ! | TTCACAACAACATTAACTAA+TGG | - | chr1.3:58407488-58407507 | None:intergenic | 25.0% |
| ! | TTTATATTATCAGAAGCCAA+AGG | + | chr1.3:58404418-58404437 | MS.gene44094:CDS | 25.0% |
| !! | AAAAATGGATCTGATTTGAA+TGG | + | chr1.3:58404365-58404384 | MS.gene44094:CDS | 25.0% |
| !! | AAATCAACATTTGTATTGGT+TGG | - | chr1.3:58406097-58406116 | None:intergenic | 25.0% |
| !! | AATATGTTCAACCAAACTTT+TGG | + | chr1.3:58405685-58405704 | MS.gene44094:CDS | 25.0% |
| !! | AATTTTCATTTGGAGGAAAA+AGG | + | chr1.3:58404927-58404946 | MS.gene44094:intron | 25.0% |
| !! | ACAATCTGATTGTGAATTTT+TGG | + | chr1.3:58405831-58405850 | MS.gene44094:intron | 25.0% |
| !! | ATATGTTCAACCAAACTTTT+GGG | + | chr1.3:58405686-58405705 | MS.gene44094:CDS | 25.0% |
| !! | ATCAGAATTTAAAACTTCCA+AGG | - | chr1.3:58406828-58406847 | None:intergenic | 25.0% |
| !! | CAAGACATATTTTATCAATG+GGG | - | chr1.3:58408764-58408783 | None:intergenic | 25.0% |
| !! | CAAGCATTAACTTTTAACAT+AGG | - | chr1.3:58407462-58407481 | None:intergenic | 25.0% |
| !! | CTACTAATCTTATCTTTTAC+AGG | + | chr1.3:58407599-58407618 | MS.gene44094:intron | 25.0% |
| !! | GTAAAGCATAAAGCATTTAT+AGG | - | chr1.3:58405307-58405326 | None:intergenic | 25.0% |
| !! | TCTCTGATTTTTATTCATCA+GGG | + | chr1.3:58409227-58409246 | MS.gene44094:intron | 25.0% |
| !! | TTCTCTGATTTTTATTCATC+AGG | + | chr1.3:58409226-58409245 | MS.gene44094:intron | 25.0% |
| !!! | AATCAACATTTGTATTGGTT+GGG | - | chr1.3:58406096-58406115 | None:intergenic | 25.0% |
| !!! | ATGATATTTTTGAGCTCTTA+AGG | + | chr1.3:58407924-58407943 | MS.gene44094:intron | 25.0% |
| !!! | CAAGTTTTATTCTTTTGTGT+GGG | + | chr1.3:58407824-58407843 | MS.gene44094:intron | 25.0% |
| !!! | CCTTTTGTTTTTTATCGTAA+TGG | + | chr1.3:58405445-58405464 | MS.gene44094:intron | 25.0% |
| !!! | GATGATTTTGATGATGATTT+TGG | + | chr1.3:58406698-58406717 | MS.gene44094:CDS | 25.0% |
| !!! | GATTGTGAATTTTTGGTATT+AGG | + | chr1.3:58405838-58405857 | MS.gene44094:intron | 25.0% |
| !!! | GTTTCATTTGATTCACTTTT+CGG | - | chr1.3:58405652-58405671 | None:intergenic | 25.0% |
| !!! | TCAAGTTTTATTCTTTTGTG+TGG | + | chr1.3:58407823-58407842 | MS.gene44094:intron | 25.0% |
| !!! | TGATTTTGATGATGATTTTG+GGG | + | chr1.3:58406700-58406719 | MS.gene44094:CDS | 25.0% |
| !!! | TTTTTTTGTCAATTAGCTAG+TGG | - | chr1.3:58404853-58404872 | None:intergenic | 25.0% |
| AAATCACAATAACTTTGACG+CGG | + | chr1.3:58408570-58408589 | MS.gene44094:CDS | 30.0% | |
| AACACCTCTAATATATAAGG+TGG | + | chr1.3:58408980-58408999 | MS.gene44094:intron | 30.0% | |
| AACATTAAGAATTCTGCAGT+TGG | + | chr1.3:58408116-58408135 | MS.gene44094:CDS | 30.0% | |
| AAGCTTATTGAACAAATACC+TGG | - | chr1.3:58408727-58408746 | None:intergenic | 30.0% | |
| ACAATCAGACTGTTCTAATT+TGG | - | chr1.3:58406975-58406994 | None:intergenic | 30.0% | |
| ACATTAAGAATTCTGCAGTT+GGG | + | chr1.3:58408117-58408136 | MS.gene44094:CDS | 30.0% | |
| ACTTGGAGAAATTTATAGAG+TGG | + | chr1.3:58408402-58408421 | MS.gene44094:CDS | 30.0% | |
| AGATAAGATTAGTAGGAACA+AGG | - | chr1.3:58407594-58407613 | None:intergenic | 30.0% | |
| AGTATTGTGTGAATTACTGT+CGG | + | chr1.3:58407856-58407875 | MS.gene44094:intron | 30.0% | |
| ATCATCACTGTTATCCAAAT+TGG | - | chr1.3:58406684-58406703 | None:intergenic | 30.0% | |
| ATTAGAACAGTCTGATTGTA+TGG | + | chr1.3:58406976-58406995 | MS.gene44094:CDS | 30.0% | |
| CAAAGTTTAAGAACTCAAGA+TGG | - | chr1.3:58406253-58406272 | None:intergenic | 30.0% | |
| CAACATTGTTCAGATTATCA+AGG | + | chr1.3:58405795-58405814 | MS.gene44094:intron | 30.0% | |
| CAAGTCATTGATAGATAAGT+TGG | - | chr1.3:58406561-58406580 | None:intergenic | 30.0% | |
| CAGTTATTATCTATCCCAAA+AGG | + | chr1.3:58408261-58408280 | MS.gene44094:CDS | 30.0% | |
| GAACAATGTTGCATAAAATG+AGG | - | chr1.3:58405786-58405805 | None:intergenic | 30.0% | |
| GAATTTAAGGATGCTATATC+TGG | + | chr1.3:58406887-58406906 | MS.gene44094:CDS | 30.0% | |
| GTAGTGAAATGAGAAGAAAA+GGG | + | chr1.3:58404966-58404985 | MS.gene44094:intron | 30.0% | |
| TAAGGTGGAACAAAATAAGT+TGG | + | chr1.3:58408995-58409014 | MS.gene44094:intron | 30.0% | |
| TCACAATCTCATCAATCTAA+CGG | + | chr1.3:58405956-58405975 | MS.gene44094:CDS | 30.0% | |
| TCATCAAAGTTCACATTTCT+CGG | - | chr1.3:58407693-58407712 | None:intergenic | 30.0% | |
| TCTTGTGACTTCAAATAATG+TGG | + | chr1.3:58404721-58404740 | MS.gene44094:intron | 30.0% | |
| TGATCATATTTGCATTTGGT+AGG | + | chr1.3:58408044-58408063 | MS.gene44094:intron | 30.0% | |
| TGCATGATCATATTTGCATT+TGG | + | chr1.3:58408040-58408059 | MS.gene44094:intron | 30.0% | |
| TGTAGTGAAATGAGAAGAAA+AGG | + | chr1.3:58404965-58404984 | MS.gene44094:intron | 30.0% | |
| TGTCAATCTGTTTGAATCAA+AGG | + | chr1.3:58406120-58406139 | MS.gene44094:CDS | 30.0% | |
| TGTTCCACCTTATATATTAG+AGG | - | chr1.3:58408987-58409006 | None:intergenic | 30.0% | |
| TTATTCATCAGGGCTAAATT+TGG | + | chr1.3:58409237-58409256 | MS.gene44094:intron | 30.0% | |
| TTGTAGAGTTGCAATTGTTA+GGG | - | chr1.3:58407292-58407311 | None:intergenic | 30.0% | |
| TTTATTTCCCACTGATATAG+AGG | + | chr1.3:58405880-58405899 | MS.gene44094:CDS | 30.0% | |
| ! | GGAACAAAATAAGTTGGAAT+GGG | + | chr1.3:58409001-58409020 | MS.gene44094:intron | 30.0% |
| ! | GTAGAAGAGAATTGTTGATT+TGG | - | chr1.3:58404104-58404123 | None:intergenic | 30.0% |
| ! | TGGAACAAAATAAGTTGGAA+TGG | + | chr1.3:58409000-58409019 | MS.gene44094:intron | 30.0% |
| ! | TTAACTTCTTCCTTTTTCTG+CGG | + | chr1.3:58408344-58408363 | MS.gene44094:intron | 30.0% |
| !! | AGAGAATTGTTGATTTGGAA+AGG | - | chr1.3:58404099-58404118 | None:intergenic | 30.0% |
| !! | AGAGGCTATGCTTTTTATTA+AGG | + | chr1.3:58409104-58409123 | MS.gene44094:intron | 30.0% |
| !! | ATCAACATTTGTATTGGTTG+GGG | - | chr1.3:58406095-58406114 | None:intergenic | 30.0% |
| !! | ATGATTTTGAAGATGATTCG+TGG | + | chr1.3:58406864-58406883 | MS.gene44094:CDS | 30.0% |
| !! | ATGCTTTTTATTAAGGGAAG+TGG | + | chr1.3:58409111-58409130 | MS.gene44094:intron | 30.0% |
| !! | GAGGCTATGCTTTTTATTAA+GGG | + | chr1.3:58409105-58409124 | MS.gene44094:intron | 30.0% |
| !! | GATTTCAATTCTAGTTCCAA+GGG | + | chr1.3:58405995-58406014 | MS.gene44094:CDS | 30.0% |
| !! | TGAGCTTCTTAAAGTTTTGA+AGG | + | chr1.3:58407710-58407729 | MS.gene44094:CDS | 30.0% |
| !! | TGATAATTGCTTTTCCACTA+AGG | - | chr1.3:58405053-58405072 | None:intergenic | 30.0% |
| !! | TGATTTCAATTCTAGTTCCA+AGG | + | chr1.3:58405994-58406013 | MS.gene44094:CDS | 30.0% |
| !! | TGATTTTGAAGATGATTCGT+GGG | + | chr1.3:58406865-58406884 | MS.gene44094:CDS | 30.0% |
| !! | TGCTTTTTATTAAGGGAAGT+GGG | + | chr1.3:58409112-58409131 | MS.gene44094:intron | 30.0% |
| !! | TTTTCTGAGAGATATTCAAC+AGG | - | chr1.3:58407663-58407682 | None:intergenic | 30.0% |
| !!! | CTTTTGGGATAGATAATAAC+TGG | - | chr1.3:58408263-58408282 | None:intergenic | 30.0% |
| !!! | GGAATTGCTTTTGTTGATTT+CGG | - | chr1.3:58406071-58406090 | None:intergenic | 30.0% |
| !!! | GGAGTTTTTTAGCAAATTGA+AGG | + | chr1.3:58406997-58407016 | MS.gene44094:CDS | 30.0% |
| !!! | TTATGCTTTACTTTTTGTGC+TGG | + | chr1.3:58405316-58405335 | MS.gene44094:intron | 30.0% |
| AAAAGTAAAAGCTCTTGAGG+TGG | + | chr1.3:58407187-58407206 | MS.gene44094:CDS | 35.0% | |
| AAACGTGTAAACGAAACCAA+CGG | + | chr1.3:58404209-58404228 | MS.gene44094:CDS | 35.0% | |
| AAATGGTCCAGTAAGAAAGA+AGG | - | chr1.3:58408000-58408019 | None:intergenic | 35.0% | |
| AAATTGGAGCCTGATAATTC+GGG | - | chr1.3:58406668-58406687 | None:intergenic | 35.0% | |
| AACATTGTGTTTGAGAGAGT+TGG | - | chr1.3:58405231-58405250 | None:intergenic | 35.0% | |
| AACTTTGTCAGAAATTCCAG+GGG | - | chr1.3:58405566-58405585 | None:intergenic | 35.0% | |
| AATAACTTCAGAGGATCGTA+GGG | + | chr1.3:58406412-58406431 | MS.gene44094:CDS | 35.0% | |
| AATCAAATGAAACTGGAGCT+GGG | + | chr1.3:58405659-58405678 | MS.gene44094:CDS | 35.0% | |
| AATCTCAAGGTAGATTTCTC+AGG | + | chr1.3:58407362-58407381 | MS.gene44094:intron | 35.0% | |
| AATGGTCCAGTAAGAAAGAA+GGG | - | chr1.3:58407999-58408018 | None:intergenic | 35.0% | |
| AATTGCAACTCTACAACCTT+GGG | + | chr1.3:58407296-58407315 | MS.gene44094:intron | 35.0% | |
| ACAAAAGATTACCTACCTTG+AGG | - | chr1.3:58407060-58407079 | None:intergenic | 35.0% | |
| AGAACAAACAAAGGCAATCT+TGG | - | chr1.3:58408181-58408200 | None:intergenic | 35.0% | |
| AGATGATTCGTGGGAATTTA+AGG | + | chr1.3:58406874-58406893 | MS.gene44094:CDS | 35.0% | |
| AGTTAGTGAATGCACATTCA+TGG | + | chr1.3:58405710-58405729 | MS.gene44094:CDS | 35.0% | |
| ATATATCGTAGGGATTGTCT+TGG | + | chr1.3:58406203-58406222 | MS.gene44094:intron | 35.0% | |
| ATTCAGGTCAGTATATGTAC+CGG | + | chr1.3:58407212-58407231 | MS.gene44094:intron | 35.0% | |
| ATTGAATGCCTCTATATCAG+TGG | - | chr1.3:58405891-58405910 | None:intergenic | 35.0% | |
| CAAATTGGAGCCTGATAATT+CGG | - | chr1.3:58406669-58406688 | None:intergenic | 35.0% | |
| CAACTTTGTCAGAAATTCCA+GGG | - | chr1.3:58405567-58405586 | None:intergenic | 35.0% | |
| CACAATCTCATCAATCTAAC+GGG | + | chr1.3:58405957-58405976 | MS.gene44094:CDS | 35.0% | |
| CAGAGAAGACAAAAGATTAC+AGG | - | chr1.3:58409213-58409232 | None:intergenic | 35.0% | |
| CAGGTCAAATCTCTACTATA+CGG | - | chr1.3:58408943-58408962 | None:intergenic | 35.0% | |
| CAGTCCATTAATCTTTGGAT+TGG | - | chr1.3:58404495-58404514 | None:intergenic | 35.0% | |
| CCAATGCAGAACAACTTTAA+TGG | + | chr1.3:58406527-58406546 | MS.gene44094:CDS | 35.0% | |
| CCATTAAAGTTGTTCTGCAT+TGG | - | chr1.3:58406530-58406549 | None:intergenic | 35.0% | |
| CTAAATTTGGCAACATGGAA+CGG | + | chr1.3:58409250-58409269 | MS.gene44094:CDS | 35.0% | |
| GAAACTGTGAATGGATCAAA+GGG | - | chr1.3:58404173-58404192 | None:intergenic | 35.0% | |
| GAATGATTTGAATCAGGATG+AGG | + | chr1.3:58404529-58404548 | MS.gene44094:CDS | 35.0% | |
| GAATGCGAATGATTTGAATC+AGG | + | chr1.3:58404523-58404542 | MS.gene44094:CDS | 35.0% | |
| GAGAGAATTGGAAAATCTCA+AGG | + | chr1.3:58407349-58407368 | MS.gene44094:intron | 35.0% | |
| GCTACCAATCCAAAGATTAA+TGG | + | chr1.3:58404488-58404507 | MS.gene44094:CDS | 35.0% | |
| GCTATTACACTCGTTCAAAA+GGG | - | chr1.3:58408506-58408525 | None:intergenic | 35.0% | |
| GCTATTCCTCTTTCAATCTT+CGG | + | chr1.3:58404263-58404282 | MS.gene44094:CDS | 35.0% | |
| GGATAGATAATAACTGGTCA+TGG | - | chr1.3:58408257-58408276 | None:intergenic | 35.0% | |
| GGATCAAATCAAACTTTGGT+TGG | + | chr1.3:58405736-58405755 | MS.gene44094:intron | 35.0% | |
| GTATAGTAGAGATTTGACCT+GGG | + | chr1.3:58408942-58408961 | MS.gene44094:intron | 35.0% | |
| GTGGGTCAATCTAATAAGTT+CGG | + | chr1.3:58409303-58409322 | MS.gene44094:CDS | 35.0% | |
| GTTCAGTATATCTATGCACT+TGG | + | chr1.3:58408385-58408404 | MS.gene44094:CDS | 35.0% | |
| GTTGAAGCTGAATTGATTGA+TGG | + | chr1.3:58404652-58404671 | MS.gene44094:intron | 35.0% | |
| GTTGTAGAGTTGCAATTGTT+AGG | - | chr1.3:58407293-58407312 | None:intergenic | 35.0% | |
| TAAATTTGGCAACATGGAAC+GGG | + | chr1.3:58409251-58409270 | MS.gene44094:CDS | 35.0% | |
| TAATAACTTCAGAGGATCGT+AGG | + | chr1.3:58406411-58406430 | MS.gene44094:CDS | 35.0% | |
| TATAGAGTGGCAGAAATTGT+TGG | + | chr1.3:58408415-58408434 | MS.gene44094:CDS | 35.0% | |
| TATAGTAGAGATTTGACCTG+GGG | + | chr1.3:58408943-58408962 | MS.gene44094:intron | 35.0% | |
| TCACTAACTTCCCAAAAGTT+TGG | - | chr1.3:58405699-58405718 | None:intergenic | 35.0% | |
| TCAGAGTCATACTTCAAAAC+CGG | + | chr1.3:58406034-58406053 | MS.gene44094:CDS | 35.0% | |
| TCATCCTACAGAATTCAATG+AGG | + | chr1.3:58406787-58406806 | MS.gene44094:CDS | 35.0% | |
| TCGTTTACACGTTTCTGAAT+GGG | - | chr1.3:58404203-58404222 | None:intergenic | 35.0% | |
| TGAAACATGGTGCTTATATC+TGG | + | chr1.3:58408208-58408227 | MS.gene44094:CDS | 35.0% | |
| TGAAACTGTGAATGGATCAA+AGG | - | chr1.3:58404174-58404193 | None:intergenic | 35.0% | |
| TGAAATGAGAAGAAAAGGGT+TGG | + | chr1.3:58404970-58404989 | MS.gene44094:intron | 35.0% | |
| TGATCCATTCACAGTTTCAT+CGG | + | chr1.3:58404175-58404194 | MS.gene44094:CDS | 35.0% | |
| TGCAAAAGTAAAAGCTCTTG+AGG | + | chr1.3:58407184-58407203 | MS.gene44094:CDS | 35.0% | |
| TGTAGAGTTGCAATTGTTAG+GGG | - | chr1.3:58407291-58407310 | None:intergenic | 35.0% | |
| TTAGAAAGCTCAAGATGTTG+CGG | + | chr1.3:58407145-58407164 | MS.gene44094:intron | 35.0% | |
| TTAGGCAAGAGATTCATTTC+AGG | + | chr1.3:58405384-58405403 | MS.gene44094:intron | 35.0% | |
| TTCGTTTACACGTTTCTGAA+TGG | - | chr1.3:58404204-58404223 | None:intergenic | 35.0% | |
| TTCTCCAGTCCATTAATCTT+TGG | - | chr1.3:58404500-58404519 | None:intergenic | 35.0% | |
| TTCTCGAATAAAAGTAACGG+TGG | + | chr1.3:58404332-58404351 | MS.gene44094:CDS | 35.0% | |
| TTGAATGCCTCTATATCAGT+GGG | - | chr1.3:58405890-58405909 | None:intergenic | 35.0% | |
| TTTCCTTGAGCATAGTTAGT+TGG | + | chr1.3:58404782-58404801 | MS.gene44094:intron | 35.0% | |
| ! | AATGGATCTGATTTGAATGG+TGG | + | chr1.3:58404368-58404387 | MS.gene44094:CDS | 35.0% |
| ! | ACTTGTGTTTGTCGTTTCAA+AGG | + | chr1.3:58407436-58407455 | MS.gene44094:intron | 35.0% |
| ! | AGTTGGTATTCTGATTCAAG+AGG | - | chr1.3:58407750-58407769 | None:intergenic | 35.0% |
| ! | CAATCCAAAGATTAATGGAC+TGG | + | chr1.3:58404493-58404512 | MS.gene44094:CDS | 35.0% |
| ! | CCAAAGGTTGATTCTCAAAA+TGG | + | chr1.3:58404434-58404453 | MS.gene44094:CDS | 35.0% |
| ! | GAGATTTTCCAATTCTCTCA+TGG | - | chr1.3:58407348-58407367 | None:intergenic | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr1.3:58404563-58404582 | MS.gene44094:CDS | 35.0% |
| ! | GGCTAAAAGTTTTCCCTTTA+AGG | - | chr1.3:58404832-58404851 | None:intergenic | 35.0% |
| ! | GGTTGATTCTCAAAATGGAT+CGG | + | chr1.3:58404439-58404458 | MS.gene44094:CDS | 35.0% |
| ! | TATCAAGTGGCTTACCTTTT+GGG | - | chr1.3:58408278-58408297 | None:intergenic | 35.0% |
| ! | TATGAGGAAGCTATGCTTTT+AGG | + | chr1.3:58405366-58405385 | MS.gene44094:intron | 35.0% |
| ! | TTATCAAGTGGCTTACCTTT+TGG | - | chr1.3:58408279-58408298 | None:intergenic | 35.0% |
| ! | TTGATAGATAAGTTGGAACC+AGG | - | chr1.3:58406554-58406573 | None:intergenic | 35.0% |
| ! | TTTGGATTGACTTACGAACA+TGG | - | chr1.3:58405278-58405297 | None:intergenic | 35.0% |
| !! | ACCAAAGTTTGATTTGATCC+TGG | - | chr1.3:58405736-58405755 | None:intergenic | 35.0% |
| !! | ACTGATATAGAGGCATTCAA+TGG | + | chr1.3:58405890-58405909 | MS.gene44094:CDS | 35.0% |
| !! | ATAGAGGCATTCAATGGTAA+TGG | + | chr1.3:58405896-58405915 | MS.gene44094:CDS | 35.0% |
| !! | ATGATGATGATGATGATGGA+TGG | + | chr1.3:58404570-58404589 | MS.gene44094:CDS | 35.0% |
| !! | CCATTTTGAGAATCAACCTT+TGG | - | chr1.3:58404437-58404456 | None:intergenic | 35.0% |
| !! | GTATTAGGAAGCACCAAAAA+AGG | + | chr1.3:58405853-58405872 | MS.gene44094:intron | 35.0% |
| !! | TCAGTATATGTACCGGTTTA+TGG | + | chr1.3:58407219-58407238 | MS.gene44094:intron | 35.0% |
| !! | TGATGATGATGATGATGGAT+GGG | + | chr1.3:58404571-58404590 | MS.gene44094:CDS | 35.0% |
| !! | TGATGATTTTGGGGACTTTA+AGG | + | chr1.3:58406709-58406728 | MS.gene44094:CDS | 35.0% |
| !! | TTTCGACAAGTATTGATGCA+TGG | + | chr1.3:58408877-58408896 | MS.gene44094:intron | 35.0% |
| !!! | ATGTCGTTTTCACTTGCTTT+TGG | - | chr1.3:58406635-58406654 | None:intergenic | 35.0% |
| AAATAGACAGTCTTCACCCT+TGG | - | chr1.3:58406014-58406033 | None:intergenic | 40.0% | |
| AAGCATGGTAATAGTGTGGT+TGG | + | chr1.3:58405517-58405536 | MS.gene44094:CDS | 40.0% | |
| AAGGATGCAGACACAGAAAT+AGG | + | chr1.3:58406139-58406158 | MS.gene44094:CDS | 40.0% | |
| AATCTCATCAATCTAACGGG+CGG | + | chr1.3:58405960-58405979 | MS.gene44094:CDS | 40.0% | |
| AATCTCTACTATACGGCAGA+TGG | - | chr1.3:58408936-58408955 | None:intergenic | 40.0% | |
| AATTGGAGCCTGATAATTCG+GGG | - | chr1.3:58406667-58406686 | None:intergenic | 40.0% | |
| ACAACTCGACTAATCCTTAG+TGG | + | chr1.3:58405036-58405055 | MS.gene44094:intron | 40.0% | |
| ACATGGTGCTTATATCTGGA+AGG | + | chr1.3:58408212-58408231 | MS.gene44094:CDS | 40.0% | |
| ACCACACTATTACCATGCTT+TGG | - | chr1.3:58405517-58405536 | None:intergenic | 40.0% | |
| ACTAGCATCAAGGTTGTCTA+TGG | + | chr1.3:58407767-58407786 | MS.gene44094:CDS | 40.0% | |
| AGCATTTATAGGGCTGCATT+TGG | - | chr1.3:58405296-58405315 | None:intergenic | 40.0% | |
| AGCTTTCTCCATGAGAGAAT+TGG | + | chr1.3:58407337-58407356 | MS.gene44094:intron | 40.0% | |
| ATAGTAGAGATTTGACCTGG+GGG | + | chr1.3:58408944-58408963 | MS.gene44094:intron | 40.0% | |
| ATATTTGCATTTGGTAGGCC+GGG | + | chr1.3:58408049-58408068 | MS.gene44094:intron | 40.0% | |
| ATTGGAGATACTGGTGCATA+GGG | - | chr1.3:58406512-58406531 | None:intergenic | 40.0% | |
| CAAAAGATTACAGGCTGAAC+AGG | - | chr1.3:58409204-58409223 | None:intergenic | 40.0% | |
| CAATATGCAGGGTCCTTAAA+GGG | + | chr1.3:58404816-58404835 | MS.gene44094:intron | 40.0% | |
| CAATTGCAACTCTACAACCT+TGG | + | chr1.3:58407295-58407314 | MS.gene44094:intron | 40.0% | |
| CAGAACAACTTTAATGGTCC+TGG | + | chr1.3:58406533-58406552 | MS.gene44094:CDS | 40.0% | |
| CAGAATACCAACTAGCATCA+AGG | + | chr1.3:58407757-58407776 | MS.gene44094:CDS | 40.0% | |
| CAGCTCTTGAGAACAAACAA+AGG | - | chr1.3:58408190-58408209 | None:intergenic | 40.0% | |
| CATATTTGCATTTGGTAGGC+CGG | + | chr1.3:58408048-58408067 | MS.gene44094:intron | 40.0% | |
| CCAACTTTGTCAGAAATTCC+AGG | - | chr1.3:58405568-58405587 | None:intergenic | 40.0% | |
| CCATCCTCATTGAATTCTGT+AGG | - | chr1.3:58406794-58406813 | None:intergenic | 40.0% | |
| CCTACAGAATTCAATGAGGA+TGG | + | chr1.3:58406791-58406810 | MS.gene44094:CDS | 40.0% | |
| CCTGGAATTTCTGACAAAGT+TGG | + | chr1.3:58405565-58405584 | MS.gene44094:CDS | 40.0% | |
| CGAATTATCAGGCTCCAATT+TGG | + | chr1.3:58406667-58406686 | MS.gene44094:CDS | 40.0% | |
| CGTATAGTAGAGATTTGACC+TGG | + | chr1.3:58408941-58408960 | MS.gene44094:intron | 40.0% | |
| CTACCAACTAACTATGCTCA+AGG | - | chr1.3:58404788-58404807 | None:intergenic | 40.0% | |
| GAAGAAGACGATGAAAGCTT+TGG | + | chr1.3:58404056-58404075 | MS.gene44094:CDS | 40.0% | |
| GAATCAAATGAAACTGGAGC+TGG | + | chr1.3:58405658-58405677 | MS.gene44094:CDS | 40.0% | |
| GACGGATATAAAATCTGCCA+TGG | + | chr1.3:58408071-58408090 | MS.gene44094:CDS | 40.0% | |
| GAGATTGTGATGCAAGAGAT+GGG | - | chr1.3:58405946-58405965 | None:intergenic | 40.0% | |
| GATTCAAGAGGTAGGAACTT+TGG | - | chr1.3:58407738-58407757 | None:intergenic | 40.0% | |
| GCCAGGATCAAATCAAACTT+TGG | + | chr1.3:58405732-58405751 | MS.gene44094:CDS | 40.0% | |
| GGAATTCAAGTCTGCAGAAT+GGG | + | chr1.3:58404592-58404611 | MS.gene44094:CDS | 40.0% | |
| GGCTATTACACTCGTTCAAA+AGG | - | chr1.3:58408507-58408526 | None:intergenic | 40.0% | |
| GGTATTCTGATTCAAGAGGT+AGG | - | chr1.3:58407746-58407765 | None:intergenic | 40.0% | |
| GGTTGGAAAGAAATGCAAGT+GGG | + | chr1.3:58404987-58405006 | MS.gene44094:intron | 40.0% | |
| TAGACAACCTTGATGCTAGT+TGG | - | chr1.3:58407767-58407786 | None:intergenic | 40.0% | |
| TAGAGACACTGCAATATGCA+GGG | + | chr1.3:58404805-58404824 | MS.gene44094:intron | 40.0% | |
| TATTTGGATCGATAGCTCAG+AGG | + | chr1.3:58409086-58409105 | MS.gene44094:intron | 40.0% | |
| TCATCGCCAAAAATTGACAG+AGG | - | chr1.3:58406446-58406465 | None:intergenic | 40.0% | |
| TCGAATAAAAGTAACGGTGG+TGG | + | chr1.3:58404335-58404354 | MS.gene44094:CDS | 40.0% | |
| TCGATACCCTTCTTTCTTAC+TGG | + | chr1.3:58407990-58408009 | MS.gene44094:intron | 40.0% | |
| TCTCTTCAACTTGACTCCTT+TGG | + | chr1.3:58408910-58408929 | MS.gene44094:intron | 40.0% | |
| TGAACGAGTGTAATAGCCTA+TGG | + | chr1.3:58408509-58408528 | MS.gene44094:CDS | 40.0% | |
| TGAGATTGTGATGCAAGAGA+TGG | - | chr1.3:58405947-58405966 | None:intergenic | 40.0% | |
| TGCATCTTTCAAGAGTTCCA+TGG | - | chr1.3:58408091-58408110 | None:intergenic | 40.0% | |
| TGCTTATATCTGGAAGGAAG+CGG | + | chr1.3:58408218-58408237 | MS.gene44094:CDS | 40.0% | |
| TGTTCTCAAGAGCTGAAACA+TGG | + | chr1.3:58408195-58408214 | MS.gene44094:CDS | 40.0% | |
| TTGGAAGAAGCAGAAACAAC+AGG | - | chr1.3:58404305-58404324 | None:intergenic | 40.0% | |
| TTGTTCTGCATTGGAGATAC+TGG | - | chr1.3:58406521-58406540 | None:intergenic | 40.0% | |
| TTTGCGAGATTGACGAAGTA+GGG | - | chr1.3:58409280-58409299 | None:intergenic | 40.0% | |
| ! | AAGTGTTTTGTGCAGATTCC+TGG | - | chr1.3:58406760-58406779 | None:intergenic | 40.0% |
| ! | ACAAGTGCTGTCAAGCTAAA+TGG | - | chr1.3:58408017-58408036 | None:intergenic | 40.0% |
| ! | AGTGTTTTGTGCAGATTCCT+GGG | - | chr1.3:58406759-58406778 | None:intergenic | 40.0% |
| ! | CTGGGCATGATTTTATCAAG+TGG | - | chr1.3:58408291-58408310 | None:intergenic | 40.0% |
| ! | GTGTTGATCAATTCACTGTC+TGG | + | chr1.3:58405009-58405028 | MS.gene44094:intron | 40.0% |
| ! | TCTGATTTGAATGGTGGTGT+TGG | + | chr1.3:58404374-58404393 | MS.gene44094:CDS | 40.0% |
| !! | AACATTTGTATTGGTTGGGG+AGG | - | chr1.3:58406092-58406111 | None:intergenic | 40.0% |
| !! | CGATCCTCTGAAGTTATTAG+CGG | - | chr1.3:58406410-58406429 | None:intergenic | 40.0% |
| !! | TTTCTGACAAAGTTGGTGAG+TGG | + | chr1.3:58405572-58405591 | MS.gene44094:CDS | 40.0% |
| !! | TTTGATTCACTTTTCGGACC+TGG | - | chr1.3:58405646-58405665 | None:intergenic | 40.0% |
| !! | TTTTGATAGTTTACTCCCCC+AGG | - | chr1.3:58408962-58408981 | None:intergenic | 40.0% |
| AACCATACCACACTAGGCTT+GGG | - | chr1.3:58407413-58407432 | None:intergenic | 45.0% | |
| AACTCTACAACCTTGGGAAG+GGG | + | chr1.3:58407302-58407321 | MS.gene44094:intron | 45.0% | |
| AATTCTGCAGTTGGGATCAG+GGG | + | chr1.3:58408125-58408144 | MS.gene44094:CDS | 45.0% | |
| AGAATTCTGCAGTTGGGATC+AGG | + | chr1.3:58408123-58408142 | MS.gene44094:CDS | 45.0% | |
| AGCTCTTGAGGTGGAAATTC+AGG | + | chr1.3:58407196-58407215 | MS.gene44094:CDS | 45.0% | |
| AGTCACAACCATACCACACT+AGG | - | chr1.3:58407419-58407438 | None:intergenic | 45.0% | |
| ATGGAACCTGACAACATCCA+TGG | - | chr1.3:58408463-58408482 | None:intergenic | 45.0% | |
| ATTGGAGCCTGATAATTCGG+GGG | - | chr1.3:58406666-58406685 | None:intergenic | 45.0% | |
| CAACTCTACAACCTTGGGAA+GGG | + | chr1.3:58407301-58407320 | MS.gene44094:intron | 45.0% | |
| CACAAACCATGGATGTTGTC+AGG | + | chr1.3:58408454-58408473 | MS.gene44094:CDS | 45.0% | |
| CACAATAACTTTGACGCGGA+TGG | + | chr1.3:58408574-58408593 | MS.gene44094:CDS | 45.0% | |
| CAGGGCTAAATTTGGCAACA+TGG | + | chr1.3:58409245-58409264 | MS.gene44094:intron | 45.0% | |
| CATCTTCAGAACCTCAAGGT+AGG | + | chr1.3:58407046-58407065 | MS.gene44094:intron | 45.0% | |
| CATTGGAGATACTGGTGCAT+AGG | - | chr1.3:58406513-58406532 | None:intergenic | 45.0% | |
| CGAGTGTAATAGCCTATGGT+TGG | + | chr1.3:58408513-58408532 | MS.gene44094:CDS | 45.0% | |
| CGGCAAAACTTCACAAACCA+TGG | + | chr1.3:58408443-58408462 | MS.gene44094:CDS | 45.0% | |
| CGTCAATCTCGCAAACTTGT+GGG | + | chr1.3:58409285-58409304 | MS.gene44094:CDS | 45.0% | |
| CTGAAGTTATTAGCGGCTTC+TGG | - | chr1.3:58406403-58406422 | None:intergenic | 45.0% | |
| CTTCAGAGCTATGTCATCTC+AGG | + | chr1.3:58408655-58408674 | MS.gene44094:CDS | 45.0% | |
| GAAGCCGCTAATAACTTCAG+AGG | + | chr1.3:58406403-58406422 | MS.gene44094:intron | 45.0% | |
| GAATTCTGCAGTTGGGATCA+GGG | + | chr1.3:58408124-58408143 | MS.gene44094:CDS | 45.0% | |
| GATTTCGGCGTGATTGTTTC+CGG | - | chr1.3:58406056-58406075 | None:intergenic | 45.0% | |
| GCAATATGCAGGGTCCTTAA+AGG | + | chr1.3:58404815-58404834 | MS.gene44094:intron | 45.0% | |
| GCCAAAAATTGACAGAGGCA+AGG | - | chr1.3:58406441-58406460 | None:intergenic | 45.0% | |
| GCCAAAGCATGGTAATAGTG+TGG | + | chr1.3:58405513-58405532 | MS.gene44094:CDS | 45.0% | |
| GGATCCGATGAAACTGTGAA+TGG | - | chr1.3:58404182-58404201 | None:intergenic | 45.0% | |
| GGCAGAAATTGTTGGAGCTT+CGG | + | chr1.3:58408423-58408442 | MS.gene44094:CDS | 45.0% | |
| GGGAATTCAAGTCTGCAGAA+TGG | + | chr1.3:58404591-58404610 | MS.gene44094:CDS | 45.0% | |
| GGGTTGGAAAGAAATGCAAG+TGG | + | chr1.3:58404986-58405005 | MS.gene44094:intron | 45.0% | |
| GTAGAGACACTGCAATATGC+AGG | + | chr1.3:58404804-58404823 | MS.gene44094:intron | 45.0% | |
| GTTCCATCTTCAGAACCTCA+AGG | + | chr1.3:58407042-58407061 | MS.gene44094:CDS | 45.0% | |
| GTTGAAGCAAACAAAGCTCG+TGG | + | chr1.3:58404239-58404258 | MS.gene44094:CDS | 45.0% | |
| GTTTGCGAGATTGACGAAGT+AGG | - | chr1.3:58409281-58409300 | None:intergenic | 45.0% | |
| TCAAGATGTTGCGGCTCTTT+CGG | + | chr1.3:58407154-58407173 | MS.gene44094:CDS | 45.0% | |
| TCCTCACCGAAGATTGAAAG+AGG | - | chr1.3:58404272-58404291 | None:intergenic | 45.0% | |
| TCCTCTTTCAATCTTCGGTG+AGG | + | chr1.3:58404268-58404287 | MS.gene44094:CDS | 45.0% | |
| TCGTCAATCTCGCAAACTTG+TGG | + | chr1.3:58409284-58409303 | MS.gene44094:CDS | 45.0% | |
| TCTCTTCTACCTCCGTTGAT+TGG | + | chr1.3:58404114-58404133 | MS.gene44094:CDS | 45.0% | |
| TGCTTCAACAGAAACACCGT+TGG | - | chr1.3:58404228-58404247 | None:intergenic | 45.0% | |
| TTTGAATCAGGATGAGGACG+AGG | + | chr1.3:58404535-58404554 | MS.gene44094:CDS | 45.0% | |
| ! | ATCTCATCAATCTAACGGGC+GGG | + | chr1.3:58405961-58405980 | MS.gene44094:CDS | 45.0% |
| ! | CTCTTCTACCTCCGTTGATT+GGG | + | chr1.3:58404115-58404134 | MS.gene44094:CDS | 45.0% |
| ! | GCCTTGCCTCTGTCAATTTT+TGG | + | chr1.3:58406437-58406456 | MS.gene44094:CDS | 45.0% |
| ! | GGCAGATTTTATATCCGTCC+CGG | - | chr1.3:58408070-58408089 | None:intergenic | 45.0% |
| ! | GGTAATAGTGTGGTTGGTGT+TGG | + | chr1.3:58405523-58405542 | MS.gene44094:CDS | 45.0% |
| ! | TCTTCTACCTCCGTTGATTG+GGG | + | chr1.3:58404116-58404135 | MS.gene44094:CDS | 45.0% |
| !! | AAAGTTGGTGAGTGGCACTT+GGG | + | chr1.3:58405580-58405599 | MS.gene44094:CDS | 45.0% |
| !! | AATAGCCTATGGTTGGCTTC+AGG | + | chr1.3:58408520-58408539 | MS.gene44094:CDS | 45.0% |
| !! | CTACCTTGAGGTTCTGAAGA+TGG | - | chr1.3:58407048-58407067 | None:intergenic | 45.0% |
| !! | GAGGCATTCAATGGTAATGG+TGG | + | chr1.3:58405899-58405918 | MS.gene44094:CDS | 45.0% |
| !! | TGAGGTTCTGAAGATGGAAC+AGG | - | chr1.3:58407042-58407061 | None:intergenic | 45.0% |
| !!! | CTTGCTTTTGGTGTCACATC+AGG | - | chr1.3:58406623-58406642 | None:intergenic | 45.0% |
| AAGTCTGCAGAATGGGAAGC+TGG | + | chr1.3:58404599-58404618 | MS.gene44094:CDS | 50.0% | |
| ACAACCTTGGGAAGGGGATA+GGG | + | chr1.3:58407308-58407327 | MS.gene44094:intron | 50.0% | |
| ACCATACCACACTAGGCTTG+GGG | - | chr1.3:58407412-58407431 | None:intergenic | 50.0% | |
| ACTATACGGCAGATGGCCAA+AGG | - | chr1.3:58408929-58408948 | None:intergenic | 50.0% | |
| ATACCTGGTATGCAACCAGC+AGG | - | chr1.3:58408712-58408731 | None:intergenic | 50.0% | |
| CAACCATACCACACTAGGCT+TGG | - | chr1.3:58407414-58407433 | None:intergenic | 50.0% | |
| CAAGATGTTGCGGCTCTTTC+GGG | + | chr1.3:58407155-58407174 | MS.gene44094:CDS | 50.0% | |
| CAAGTCCTGAAGCCAACCAT+AGG | - | chr1.3:58408528-58408547 | None:intergenic | 50.0% | |
| CATGTCTCCCCCGAATTATC+AGG | + | chr1.3:58406656-58406675 | MS.gene44094:CDS | 50.0% | |
| CTGAACACCTATGTCAACCC+AGG | - | chr1.3:58408371-58408390 | None:intergenic | 50.0% | |
| GACGAAACCTCCCCAATCAA+CGG | - | chr1.3:58404129-58404148 | None:intergenic | 50.0% | |
| GATTGGGGAGGTTTCGTCAA+TGG | + | chr1.3:58404131-58404150 | MS.gene44094:CDS | 50.0% | |
| GCAACTCTACAACCTTGGGA+AGG | + | chr1.3:58407300-58407319 | MS.gene44094:intron | 50.0% | |
| GGGCTGTGAGATGCAGAAAT+AGG | - | chr1.3:58405619-58405638 | None:intergenic | 50.0% | |
| GTGAATGCACATTCATGGCC+AGG | + | chr1.3:58405715-58405734 | MS.gene44094:CDS | 50.0% | |
| TACAACCTTGGGAAGGGGAT+AGG | + | chr1.3:58407307-58407326 | MS.gene44094:intron | 50.0% | |
| TACAGGCTGAACAGGATGCT+AGG | - | chr1.3:58409196-58409215 | None:intergenic | 50.0% | |
| TGCAGATTCCTGGGCGAATT+GGG | - | chr1.3:58406750-58406769 | None:intergenic | 50.0% | |
| ! | AAGGTTGAAGCGCCAAAGCA+TGG | + | chr1.3:58405502-58405521 | MS.gene44094:intron | 50.0% |
| ! | CTTCCTTTTTCTGCGGTCCT+GGG | + | chr1.3:58408351-58408370 | MS.gene44094:intron | 50.0% |
| ! | GCTTTGTTGGATTCATCCCC+TGG | + | chr1.3:58405547-58405566 | MS.gene44094:CDS | 50.0% |
| ! | TCTCATCAATCTAACGGGCG+GGG | + | chr1.3:58405962-58405981 | MS.gene44094:CDS | 50.0% |
| ! | TCTTCCTTTTTCTGCGGTCC+TGG | + | chr1.3:58408350-58408369 | MS.gene44094:intron | 50.0% |
| !! | AAGTTGGTGAGTGGCACTTG+GGG | + | chr1.3:58405581-58405600 | MS.gene44094:CDS | 50.0% |
| !! | ATGTGCTGCTGTGCTGCTTA+TGG | + | chr1.3:58408313-58408332 | MS.gene44094:intron | 50.0% |
| !! | CAAAGTTGGTGAGTGGCACT+TGG | + | chr1.3:58405579-58405598 | MS.gene44094:CDS | 50.0% |
| !! | GGATGGATTGCAGACTTCCT+TGG | + | chr1.3:58406808-58406827 | MS.gene44094:CDS | 50.0% |
| !! | GGTGGTGGTGCTGTGAAAAA+TGG | + | chr1.3:58404350-58404369 | MS.gene44094:CDS | 50.0% |
| !! | GGTTGGTGTTGGTGCTTTGT+TGG | + | chr1.3:58405534-58405553 | MS.gene44094:CDS | 50.0% |
| ACCCCAAGCCTAGTGTGGTA+TGG | + | chr1.3:58407408-58407427 | MS.gene44094:intron | 55.0% | |
| ACCTGAAACCCAATTCGCCC+AGG | + | chr1.3:58406739-58406758 | MS.gene44094:CDS | 55.0% | |
| ATTCCCCTATCCCCTTCCCA+AGG | - | chr1.3:58407315-58407334 | None:intergenic | 55.0% | |
| CAACCCAGGACCGCAGAAAA+AGG | - | chr1.3:58408357-58408376 | None:intergenic | 55.0% | |
| CAACCTTGGGAAGGGGATAG+GGG | + | chr1.3:58407309-58407328 | MS.gene44094:intron | 55.0% | |
| CAGCACAGCAGCACATGACT+GGG | - | chr1.3:58408309-58408328 | None:intergenic | 55.0% | |
| GAAACCTCCCCAATCAACGG+AGG | - | chr1.3:58404126-58404145 | None:intergenic | 55.0% | |
| GTGCAGATTCCTGGGCGAAT+TGG | - | chr1.3:58406751-58406770 | None:intergenic | 55.0% | |
| TCAGGATGAGGACGAGGATG+AGG | + | chr1.3:58404541-58404560 | MS.gene44094:CDS | 55.0% | |
| TCCTGGGCGAATTGGGTTTC+AGG | - | chr1.3:58406743-58406762 | None:intergenic | 55.0% | |
| TGACGCGGATGGCATCTCAA+GGG | + | chr1.3:58408585-58408604 | MS.gene44094:CDS | 55.0% | |
| TGGGGAGGTTTCGTCAATGG+CGG | + | chr1.3:58404134-58404153 | MS.gene44094:CDS | 55.0% | |
| TGGTATGCAACCAGCAGGCA+AGG | - | chr1.3:58408707-58408726 | None:intergenic | 55.0% | |
| TTGACGCGGATGGCATCTCA+AGG | + | chr1.3:58408584-58408603 | MS.gene44094:CDS | 55.0% | |
| TTGCATTTGGTAGGCCGGGA+CGG | + | chr1.3:58408053-58408072 | MS.gene44094:intron | 55.0% | |
| ! | TCTACCTCCGTTGATTGGGG+AGG | + | chr1.3:58404119-58404138 | MS.gene44094:CDS | 55.0% |
| ! | TTGCCTGCTGGTTGCATACC+AGG | + | chr1.3:58408706-58408725 | MS.gene44094:CDS | 55.0% |
| !! | TCACTTTTCGGACCTGGCTG+CGG | - | chr1.3:58405640-58405659 | None:intergenic | 55.0% |
| CAGCAGGCAAGGCTGACAAC+TGG | - | chr1.3:58408696-58408715 | None:intergenic | 60.0% | |
| CAGTTGTCAGCCTTGCCTGC+TGG | + | chr1.3:58408694-58408713 | MS.gene44094:CDS | 60.0% | |
| CCACACTAGGCTTGGGGTTC+TGG | - | chr1.3:58407406-58407425 | None:intergenic | 60.0% | |
| CCAGAACCCCAAGCCTAGTG+TGG | + | chr1.3:58407403-58407422 | MS.gene44094:intron | 60.0% | |
| GCAGCACAGCAGCACATGAC+TGG | - | chr1.3:58408310-58408329 | None:intergenic | 60.0% | |
| GGGGAGGTTTCGTCAATGGC+GGG | + | chr1.3:58404135-58404154 | MS.gene44094:CDS | 60.0% | |
| ! | CAATCTAACGGGCGGGGCTT+TGG | + | chr1.3:58405968-58405987 | MS.gene44094:CDS | 60.0% |
| ! | CACTTTTCGGACCTGGCTGC+GGG | - | chr1.3:58405639-58405658 | None:intergenic | 60.0% |
| ! | CTGCGGTCCTGGGTTGACAT+AGG | + | chr1.3:58408361-58408380 | MS.gene44094:intron | 60.0% |
| GCATCTCACAGCCCGCAGCC+AGG | + | chr1.3:58405625-58405644 | MS.gene44094:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58404044 | 58409339 | 58404044 | ID=MS.gene44094 |
| chr1.3 | mRNA | 58404044 | 58409339 | 58404044 | ID=MS.gene44094.t1;Parent=MS.gene44094 |
| chr1.3 | exon | 58404044 | 58404643 | 58404044 | ID=MS.gene44094.t1.exon1;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58404044 | 58404643 | 58404044 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58405505 | 58405753 | 58405505 | ID=MS.gene44094.t1.exon2;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58405505 | 58405753 | 58405505 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58405860 | 58406174 | 58405860 | ID=MS.gene44094.t1.exon3;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58405860 | 58406174 | 58405860 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58406404 | 58407063 | 58406404 | ID=MS.gene44094.t1.exon4;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58406404 | 58407063 | 58406404 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58407149 | 58407217 | 58407149 | ID=MS.gene44094.t1.exon5;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58407149 | 58407217 | 58407149 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58407621 | 58407788 | 58407621 | ID=MS.gene44094.t1.exon6;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58407621 | 58407788 | 58407621 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58408066 | 58408282 | 58408066 | ID=MS.gene44094.t1.exon7;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58408066 | 58408282 | 58408066 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58408383 | 58408727 | 58408383 | ID=MS.gene44094.t1.exon8;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58408383 | 58408727 | 58408383 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| chr1.3 | exon | 58409248 | 58409339 | 58409248 | ID=MS.gene44094.t1.exon9;Parent=MS.gene44094.t1 |
| chr1.3 | CDS | 58409248 | 58409339 | 58409248 | ID=cds.MS.gene44094.t1;Parent=MS.gene44094.t1 |
| Gene Sequence |
| Protein sequence |
