Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056035.t1 | XP_003591102.1 | 89 | 901 | 97 | 2 | 1 | 901 | 1 | 899 | 0.00E+00 | 1500.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056035.t1 | G7I832 | 89.0 | 901 | 97 | 2 | 1 | 901 | 1 | 899 | 0.0e+00 | 1500.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055572 | MS.gene056035 | 0.856215 | 3.74E-62 | -1.69E-46 |
| MS.gene056035 | MS.gene39937 | 0.810131 | 1.34E-50 | -1.69E-46 |
| MS.gene056035 | MS.gene44094 | 0.921615 | 2.85E-88 | -1.69E-46 |
| MS.gene056035 | MS.gene49370 | 0.824111 | 9.64E-54 | -1.69E-46 |
| MS.gene056035 | MS.gene50553 | 0.803628 | 3.18E-49 | -1.69E-46 |
| MS.gene056035 | MS.gene57382 | 0.808699 | 2.72E-50 | -1.69E-46 |
| MS.gene056035 | MS.gene60550 | 0.820046 | 8.43E-53 | -1.69E-46 |
| MS.gene056035 | MS.gene81037 | 0.801426 | 9.05E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056035.t1 | MTR_1g082840 | 93.245 | 903 | 55 | 3 | 1 | 901 | 1 | 899 | 0.0 | 1650 |
| MS.gene056035.t1 | MTR_1g082840 | 92.802 | 903 | 53 | 4 | 1 | 901 | 1 | 893 | 0.0 | 1635 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056035.t1 | AT1G54920 | 31.624 | 936 | 493 | 24 | 30 | 900 | 26 | 879 | 1.02e-94 | 318 |
| MS.gene056035.t1 | AT1G54920 | 31.257 | 947 | 493 | 26 | 30 | 900 | 26 | 890 | 1.35e-90 | 307 |
| MS.gene056035.t1 | AT1G54920 | 29.672 | 792 | 418 | 22 | 30 | 756 | 26 | 743 | 1.07e-52 | 197 |
| MS.gene056035.t1 | AT1G54920 | 27.994 | 718 | 378 | 22 | 30 | 682 | 26 | 669 | 2.97e-29 | 125 |
Find 203 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATGTTGCGGCTCTTTC+GGG | 0.148308 | 1.1:+61338802 | MS.gene056035:CDS |
| TCCTGGGCGAATTGGGTTTC+AGG | 0.163962 | 1.1:-61338387 | None:intergenic |
| AGATGATTCGTGGGAATTTA+AGG | 0.176449 | 1.1:+61338521 | MS.gene056035:CDS |
| ACAATCAGACTGTTCTAATT+TGG | 0.181469 | 1.1:-61338619 | None:intergenic |
| TCAAGATGTTGCGGCTCTTT+CGG | 0.214221 | 1.1:+61338801 | MS.gene056035:CDS |
| AAATTCATGAATGTACTTAA+TGG | 0.215583 | 1.1:-61340267 | None:intergenic |
| ATCATCACTGTTATCCAAAT+TGG | 0.216054 | 1.1:-61338328 | None:intergenic |
| TGGCTTCTGATAATATAAAT+TGG | 0.221125 | 1.1:-61336071 | None:intergenic |
| TTATTCATCAGGGCTAAATT+TGG | 0.229118 | 1.1:+61340884 | MS.gene056035:intron |
| AATATGTTCAACCAAACTTT+TGG | 0.236762 | 1.1:+61337333 | MS.gene056035:CDS |
| GCTACCAATCCAAAGATTAA+TGG | 0.255549 | 1.1:+61336145 | MS.gene056035:CDS |
| CCAAAGGTTGATTCTCAAAA+TGG | 0.264749 | 1.1:+61336091 | MS.gene056035:CDS |
| CGAATTATCAGGCTCCAATT+TGG | 0.267630 | 1.1:+61338314 | MS.gene056035:CDS |
| AAATAAACTTGTACAATCTA+TGG | 0.286314 | 1.1:-61340126 | None:intergenic |
| TTCTCCAGTCCATTAATCTT+TGG | 0.286528 | 1.1:-61336154 | None:intergenic |
| CTCTTCTACCTCCGTTGATT+GGG | 0.286826 | 1.1:+61335772 | MS.gene056035:CDS |
| GATTTCGGCGTGATTGTTTC+CGG | 0.289334 | 1.1:-61337701 | None:intergenic |
| AGCTCTTGAGGTGGAAATTC+AGG | 0.290361 | 1.1:+61338843 | MS.gene056035:CDS |
| GTGCAGATTCCTGGGCGAAT+TGG | 0.293549 | 1.1:-61338395 | None:intergenic |
| CAAATTGGAGCCTGATAATT+CGG | 0.308500 | 1.1:-61338313 | None:intergenic |
| TATCTATCAATGACTTGATA+TGG | 0.312764 | 1.1:+61338211 | MS.gene056035:CDS |
| GGTTGGTGTTGGTGCTTTGT+TGG | 0.320033 | 1.1:+61337182 | MS.gene056035:CDS |
| GTAGAAGAGAATTGTTGATT+TGG | 0.320795 | 1.1:-61335758 | None:intergenic |
| AATCAACATTTGTATTGGTT+GGG | 0.322862 | 1.1:-61337741 | None:intergenic |
| CAATCTAACGGGCGGGGCTT+TGG | 0.332122 | 1.1:+61337616 | MS.gene056035:CDS |
| TGCAGATTCCTGGGCGAATT+GGG | 0.334647 | 1.1:-61338394 | None:intergenic |
| TCACTAACTTCCCAAAAGTT+TGG | 0.335594 | 1.1:-61337344 | None:intergenic |
| AAGGATGCAGACACAGAAAT+AGG | 0.349705 | 1.1:+61337787 | MS.gene056035:CDS |
| AACTAAATCAACATTTGTAT+TGG | 0.351274 | 1.1:-61337746 | None:intergenic |
| TCTCTTCTACCTCCGTTGAT+TGG | 0.357644 | 1.1:+61335771 | MS.gene056035:CDS |
| AAAAGTGAATCAAATGAAAC+TGG | 0.362054 | 1.1:+61337300 | MS.gene056035:CDS |
| TCATCAAAGTTCACATTTCT+CGG | 0.362746 | 1.1:-61339337 | None:intergenic |
| AGAATTCTGCAGTTGGGATC+AGG | 0.372531 | 1.1:+61339770 | MS.gene056035:CDS |
| TGAAACATGGTGCTTATATC+TGG | 0.372799 | 1.1:+61339855 | MS.gene056035:CDS |
| AATCTAATTATCTTACTATA+TGG | 0.375362 | 1.1:+61339801 | MS.gene056035:CDS |
| GCTATTCCTCTTTCAATCTT+CGG | 0.380199 | 1.1:+61335920 | MS.gene056035:CDS |
| GATTGGGGAGGTTTCGTCAA+TGG | 0.387060 | 1.1:+61335788 | MS.gene056035:CDS |
| GGCTATTACACTCGTTCAAA+AGG | 0.387490 | 1.1:-61340151 | None:intergenic |
| CAGTTGTCAGCCTTGCCTGC+TGG | 0.391026 | 1.1:+61340341 | MS.gene056035:CDS |
| AGAACAAACAAAGGCAATCT+TGG | 0.393277 | 1.1:-61339825 | None:intergenic |
| AATAGCCTATGGTTGGCTTC+AGG | 0.393711 | 1.1:+61340167 | MS.gene056035:CDS |
| AAATCAACATTTGTATTGGT+TGG | 0.396398 | 1.1:-61337742 | None:intergenic |
| TTTATTTCCCACTGATATAG+AGG | 0.398047 | 1.1:+61337528 | MS.gene056035:CDS |
| CAAGTCATTGATAGATAAGT+TGG | 0.399134 | 1.1:-61338205 | None:intergenic |
| GGCAGAAATTGTTGGAGCTT+CGG | 0.400669 | 1.1:+61340070 | MS.gene056035:CDS |
| GGGCTGTGAGATGCAGAAAT+AGG | 0.402417 | 1.1:-61337264 | None:intergenic |
| GCTTTGTTGGATTCATCCCC+TGG | 0.403640 | 1.1:+61337195 | MS.gene056035:CDS |
| ATTAGAACAGTCTGATTGTA+TGG | 0.404879 | 1.1:+61338623 | MS.gene056035:CDS |
| ACTAGCATCAAGGTTGTCTA+TGG | 0.404944 | 1.1:+61339414 | MS.gene056035:CDS |
| TTCGTTTACACGTTTCTGAA+TGG | 0.409186 | 1.1:-61335858 | None:intergenic |
| CCAACTTTGTCAGAAATTCC+AGG | 0.410193 | 1.1:-61337213 | None:intergenic |
| TCGTTTACACGTTTCTGAAT+GGG | 0.412749 | 1.1:-61335857 | None:intergenic |
| TTGCCTGCTGGTTGCATACC+AGG | 0.414091 | 1.1:+61340353 | MS.gene056035:CDS |
| TTGTTCTGCATTGGAGATAC+TGG | 0.416629 | 1.1:-61338165 | None:intergenic |
| GAATTTAAGGATGCTATATC+TGG | 0.416934 | 1.1:+61338534 | MS.gene056035:CDS |
| CTTAGAATGTTCATTTGTAT+CGG | 0.418872 | 1.1:-61338118 | None:intergenic |
| CTATTAAAGTTGTTCTGCAT+TGG | 0.422521 | 1.1:-61338174 | None:intergenic |
| TCAGAGTCATACTTCAAAAC+CGG | 0.430690 | 1.1:+61337682 | MS.gene056035:CDS |
| AAACAATAACTTGAATGTTA+AGG | 0.431274 | 1.1:+61336270 | MS.gene056035:CDS |
| CAGCAGGCAAGGCTGACAAC+TGG | 0.432697 | 1.1:-61340340 | None:intergenic |
| ACCACACTATTACCATGCTT+TGG | 0.434136 | 1.1:-61337162 | None:intergenic |
| CTACCTTGAGGTTCTGAAGA+TGG | 0.435237 | 1.1:-61338692 | None:intergenic |
| GATTCAAGAGGTAGGAACTT+TGG | 0.435348 | 1.1:-61339382 | None:intergenic |
| TATAGAGTGGCAGAAATTGT+TGG | 0.443132 | 1.1:+61340062 | MS.gene056035:CDS |
| TGAACGAGTGTAATAGCCTA+TGG | 0.450578 | 1.1:+61340156 | MS.gene056035:CDS |
| GGATGGATTGCAGACTTCCT+TGG | 0.450987 | 1.1:+61338455 | MS.gene056035:CDS |
| TTAGAATGTTCATTTGTATC+GGG | 0.452314 | 1.1:-61338117 | None:intergenic |
| CACAAACCATGGATGTTGTC+AGG | 0.458854 | 1.1:+61340101 | MS.gene056035:CDS |
| TGTCAATCTGTTTGAATCAA+AGG | 0.459005 | 1.1:+61337768 | MS.gene056035:CDS |
| CAGAACAACTTTAATAGTCC+TGG | 0.459181 | 1.1:+61338180 | MS.gene056035:CDS |
| CACAATCTCATCAATCTAAC+GGG | 0.463317 | 1.1:+61337605 | MS.gene056035:CDS |
| AGAGAATTGTTGATTTGGAA+AGG | 0.463565 | 1.1:-61335753 | None:intergenic |
| ATCAACATTTGTATTGGTTG+GGG | 0.467933 | 1.1:-61337740 | None:intergenic |
| AGTTAGTGAATGCACATTCA+TGG | 0.471958 | 1.1:+61337358 | MS.gene056035:CDS |
| GAATGCGAATGATTTGAATC+AGG | 0.472340 | 1.1:+61336180 | MS.gene056035:CDS |
| GCCAGGATCAAATCAAACTT+TGG | 0.472722 | 1.1:+61337380 | MS.gene056035:CDS |
| GGAATTCAAGTCTGCAGAAT+GGG | 0.474278 | 1.1:+61336240 | MS.gene056035:CDS |
| AAATTGGAGCCTGATAATTC+GGG | 0.478972 | 1.1:-61338312 | None:intergenic |
| TTTGCGAGATTGACGAAGTA+GGG | 0.480307 | 1.1:-61340924 | None:intergenic |
| GTGGGTCAATCTAATAAGTT+CGG | 0.480516 | 1.1:+61340950 | MS.gene056035:CDS |
| CACAATAACTTTGACGCGGA+TGG | 0.480863 | 1.1:+61340221 | MS.gene056035:CDS |
| GGGGAGGTTTCGTCAATGGC+GGG | 0.481648 | 1.1:+61335792 | MS.gene056035:CDS |
| CTTCAGAGCTATGTCATCTC+AGG | 0.482897 | 1.1:+61340302 | MS.gene056035:CDS |
| AACATTAAGAATTCTGCAGT+TGG | 0.483366 | 1.1:+61339763 | MS.gene056035:CDS |
| ACCAAAGTTTGATTTGATCC+TGG | 0.483430 | 1.1:-61337381 | None:intergenic |
| CGTCAATCTCGCAAACTTGT+GGG | 0.483461 | 1.1:+61340932 | MS.gene056035:CDS |
| TCTCTCAGCTATGGCGGAAG+AGG | 0.485033 | 1.1:+61335691 | None:intergenic |
| GAAACTGTGAATGGATCAAA+GGG | 0.488889 | 1.1:-61335827 | None:intergenic |
| CCTGGAATTTCTGACAAAGT+TGG | 0.490882 | 1.1:+61337213 | MS.gene056035:CDS |
| GAATCAAATGAAACTGGAGC+TGG | 0.494381 | 1.1:+61337306 | MS.gene056035:CDS |
| ATCTCATCAATCTAACGGGC+GGG | 0.495036 | 1.1:+61337609 | MS.gene056035:CDS |
| GCATCTCACAGCCCGCAGCC+AGG | 0.495531 | 1.1:+61337273 | MS.gene056035:CDS |
| CGATCCTCTGAAGTTATTAG+CGG | 0.496712 | 1.1:-61338054 | None:intergenic |
| CTAAATTTGGCAACATGGAA+CGG | 0.497359 | 1.1:+61340897 | MS.gene056035:CDS |
| TAAATTTGGCAACATGGAAC+GGG | 0.497987 | 1.1:+61340898 | MS.gene056035:CDS |
| TTGGAAGAAGCAGAAACAAC+AGG | 0.502353 | 1.1:-61335959 | None:intergenic |
| ACATTAAGAATTCTGCAGTT+GGG | 0.503211 | 1.1:+61339764 | MS.gene056035:CDS |
| TGATCCATTCACAGTTTCAT+CGG | 0.503274 | 1.1:+61335832 | MS.gene056035:CDS |
| TGAGGTTCTGAAGATGGAAC+AGG | 0.503569 | 1.1:-61338686 | None:intergenic |
| AAATAGACTGTCTTCACCCT+TGG | 0.503812 | 1.1:-61337659 | None:intergenic |
| TCAGGATGAGGACGAGGATG+AGG | 0.505723 | 1.1:+61336198 | MS.gene056035:CDS |
| TGGGGAGGTTTCGTCAATGG+CGG | 0.508646 | 1.1:+61335791 | MS.gene056035:CDS |
| TGATTTCAATTCTAGTTCCA+AGG | 0.509844 | 1.1:+61337642 | MS.gene056035:CDS |
| GTTTGCGAGATTGACGAAGT+AGG | 0.511121 | 1.1:-61340925 | None:intergenic |
| GTGAATGCACATTCATGGCC+AGG | 0.512403 | 1.1:+61337363 | MS.gene056035:CDS |
| GGTAATAGTGTGGTTGGTGT+TGG | 0.516722 | 1.1:+61337171 | MS.gene056035:CDS |
| CAAAGTTGGTGAGTGGCACT+TGG | 0.517021 | 1.1:+61337227 | MS.gene056035:CDS |
| CATTGGAGATACTGGTGCAT+AGG | 0.517979 | 1.1:-61338157 | None:intergenic |
| AACATTTGTATTGGTTGGGG+AGG | 0.522086 | 1.1:-61337737 | None:intergenic |
| TCGTCAATCTCGCAAACTTG+TGG | 0.523955 | 1.1:+61340931 | MS.gene056035:CDS |
| TCCTCACCGAAGATTGAAAG+AGG | 0.524124 | 1.1:-61335926 | None:intergenic |
| AAGTCTGCAGAATGGGAAGC+TGG | 0.524246 | 1.1:+61336247 | MS.gene056035:CDS |
| CAGTCCATTAATCTTTGGAT+TGG | 0.525856 | 1.1:-61336149 | None:intergenic |
| CAATCCAAAGATTAATGGAC+TGG | 0.527757 | 1.1:+61336150 | MS.gene056035:CDS |
| CCTACAGAATTCAATGAGGA+TGG | 0.530052 | 1.1:+61338438 | MS.gene056035:CDS |
| GAATTCTGCAGTTGGGATCA+GGG | 0.531440 | 1.1:+61339771 | MS.gene056035:CDS |
| ATAGAGGCATTCAATGGTAA+TGG | 0.532182 | 1.1:+61337544 | MS.gene056035:CDS |
| TGAAACTGTGAATGGATCAA+AGG | 0.533660 | 1.1:-61335828 | None:intergenic |
| GAAGAAGACGATGAAAGCTT+CGG | 0.535152 | 1.1:+61335713 | MS.gene056035:CDS |
| TTGCATTTGGTAGGCCGGGA+CGG | 0.535886 | 1.1:+61339700 | MS.gene056035:intron |
| GGATAGATAATAACTGGTCA+TGG | 0.537539 | 1.1:-61339901 | None:intergenic |
| CAGGGCTAAATTTGGCAACA+TGG | 0.539384 | 1.1:+61340892 | MS.gene056035:intron |
| TAGACAACCTTGATGCTAGT+TGG | 0.539608 | 1.1:-61339411 | None:intergenic |
| TCTGATTTGAATGGTGGTGT+TGG | 0.540670 | 1.1:+61336031 | MS.gene056035:CDS |
| ATCAGAATTTAAAACTTCCA+AGG | 0.541914 | 1.1:-61338472 | None:intergenic |
| GGTTGATTCTCAAAATGGAT+CGG | 0.543893 | 1.1:+61336096 | MS.gene056035:CDS |
| GCTATTACACTCGTTCAAAA+GGG | 0.544947 | 1.1:-61340150 | None:intergenic |
| TCACAATCTCATCAATCTAA+CGG | 0.545941 | 1.1:+61337604 | MS.gene056035:CDS |
| GATTTCAATTCTAGTTCCAA+GGG | 0.546352 | 1.1:+61337643 | MS.gene056035:CDS |
| ATTGGAGATACTGGTGCATA+GGG | 0.548698 | 1.1:-61338156 | None:intergenic |
| TCTTCTACCTCCGTTGATTG+GGG | 0.551291 | 1.1:+61335773 | MS.gene056035:CDS |
| TTGACGCGGATGGCATCTCA+AGG | 0.553383 | 1.1:+61340231 | MS.gene056035:CDS |
| TAATAACTTCAGAGGATCGT+AGG | 0.553389 | 1.1:+61338058 | MS.gene056035:CDS |
| CAGTTATTATCTATCCCAAA+AGG | 0.553845 | 1.1:+61339908 | MS.gene056035:CDS |
| TTGAATTGTCAGGTATCACT+GGG | 0.557539 | 1.1:-61340979 | None:intergenic |
| CAGAATACCAACTAGCATCA+AGG | 0.559469 | 1.1:+61339404 | MS.gene056035:CDS |
| CAACTTTGTCAGAAATTCCA+GGG | 0.561317 | 1.1:-61337212 | None:intergenic |
| GGGAATTCAAGTCTGCAGAA+TGG | 0.561502 | 1.1:+61336239 | MS.gene056035:CDS |
| TGCAAAAGTAAAAGCTCTTG+AGG | 0.561816 | 1.1:+61338831 | MS.gene056035:CDS |
| TCTACCTCCGTTGATTGGGG+AGG | 0.565034 | 1.1:+61335776 | MS.gene056035:CDS |
| GATGAGGATGATGATGATGA+TGG | 0.566372 | 1.1:+61336214 | MS.gene056035:CDS |
| ACTGATATAGAGGCATTCAA+TGG | 0.566687 | 1.1:+61337538 | MS.gene056035:CDS |
| TGGTATGCAACCAGCAGGCA+AGG | 0.566761 | 1.1:-61340351 | None:intergenic |
| CGGCAAAACTTCACAAACCA+TGG | 0.571804 | 1.1:+61340090 | MS.gene056035:CDS |
| ACCTGAAACCCAATTCGCCC+AGG | 0.572774 | 1.1:+61338386 | MS.gene056035:CDS |
| TCTCATCAATCTAACGGGCG+GGG | 0.575170 | 1.1:+61337610 | MS.gene056035:CDS |
| AAGGTTGAAGCGCCAAAGCA+TGG | 0.575855 | 1.1:+61337150 | MS.gene056035:intron |
| TTAGAAAGCTCAAGATGTTG+CGG | 0.576556 | 1.1:+61338792 | MS.gene056035:intron |
| CAAGTCCTGAAGCCAACCAT+AGG | 0.577926 | 1.1:-61340172 | None:intergenic |
| AAAGTTGGTGAGTGGCACTT+GGG | 0.578107 | 1.1:+61337228 | MS.gene056035:CDS |
| GGTATTCTGATTCAAGAGGT+AGG | 0.584472 | 1.1:-61339390 | None:intergenic |
| GACGGATATAAAATCTGCCA+TGG | 0.585582 | 1.1:+61339718 | MS.gene056035:CDS |
| GTTCAGTATATCTATGCACT+TGG | 0.587375 | 1.1:+61340032 | MS.gene056035:CDS |
| TCGAATAAAAGTAACGGTGG+TGG | 0.588049 | 1.1:+61335992 | MS.gene056035:CDS |
| TGCTTCAACAGAAACACCGT+TGG | 0.588377 | 1.1:-61335882 | None:intergenic |
| GAATGATTTGAATCAGGATG+AGG | 0.589134 | 1.1:+61336186 | MS.gene056035:CDS |
| CGAGTGTAATAGCCTATGGT+TGG | 0.589432 | 1.1:+61340160 | MS.gene056035:CDS |
| AATGGATCTGATTTGAATGG+TGG | 0.590637 | 1.1:+61336025 | MS.gene056035:CDS |
| AATAACTTCAGAGGATCGTA+GGG | 0.591425 | 1.1:+61338059 | MS.gene056035:CDS |
| TTGAATGCCTCTATATCAGT+GGG | 0.594268 | 1.1:-61337535 | None:intergenic |
| TGCATCTTTCAAGAGTTCCA+TGG | 0.595324 | 1.1:-61339735 | None:intergenic |
| GACGAAACCTCCCCAATCAA+CGG | 0.595714 | 1.1:-61335783 | None:intergenic |
| CCATCCTCATTGAATTCTGT+AGG | 0.598152 | 1.1:-61338438 | None:intergenic |
| TTTATATTATCAGAAGCCAA+AGG | 0.598560 | 1.1:+61336075 | MS.gene056035:CDS |
| TGCTTATATCTGGAAGGAAG+CGG | 0.599222 | 1.1:+61339865 | MS.gene056035:CDS |
| AAGTTGGTGAGTGGCACTTG+GGG | 0.599730 | 1.1:+61337229 | MS.gene056035:CDS |
| AATTCTGCAGTTGGGATCAG+GGG | 0.600189 | 1.1:+61339772 | MS.gene056035:CDS |
| ACATGGTGCTTATATCTGGA+AGG | 0.601445 | 1.1:+61339859 | MS.gene056035:CDS |
| TTCTCGAATAAAAGTAACGG+TGG | 0.603271 | 1.1:+61335989 | MS.gene056035:CDS |
| GAGGCATTCAATGGTAATGG+TGG | 0.603637 | 1.1:+61337547 | MS.gene056035:CDS |
| TTTGAATCAGGATGAGGACG+AGG | 0.604085 | 1.1:+61336192 | MS.gene056035:CDS |
| GGATCCGATGAAACTGTGAA+TGG | 0.604883 | 1.1:-61335836 | None:intergenic |
| ATACCTGGTATGCAACCAGC+AGG | 0.606123 | 1.1:-61340356 | None:intergenic |
| AATCAAATGAAACTGGAGCT+GGG | 0.607360 | 1.1:+61337307 | MS.gene056035:CDS |
| ATGGAACCTGACAACATCCA+TGG | 0.607890 | 1.1:-61340107 | None:intergenic |
| TCCTCTTTCAATCTTCGGTG+AGG | 0.609164 | 1.1:+61335925 | MS.gene056035:CDS |
| AAGCATGGTAATAGTGTGGT+TGG | 0.611801 | 1.1:+61337165 | MS.gene056035:CDS |
| AGTTGGTATTCTGATTCAAG+AGG | 0.614131 | 1.1:-61339394 | None:intergenic |
| TGAGATTGTGATGCAAGAGA+TGG | 0.614358 | 1.1:-61337592 | None:intergenic |
| ACTTGGAGAAATTTATAGAG+TGG | 0.614816 | 1.1:+61340049 | MS.gene056035:CDS |
| ATTGAATGCCTCTATATCAG+TGG | 0.615157 | 1.1:-61337536 | None:intergenic |
| TTGATAGATAAGTTGGAACC+AGG | 0.617944 | 1.1:-61338198 | None:intergenic |
| GAGATTGTGATGCAAGAGAT+GGG | 0.622825 | 1.1:-61337591 | None:intergenic |
| GAAGCCGCTAATAACTTCAG+AGG | 0.638128 | 1.1:+61338050 | MS.gene056035:intron |
| AATCTCATCAATCTAACGGG+CGG | 0.638987 | 1.1:+61337608 | MS.gene056035:CDS |
| TTTCTGACAAAGTTGGTGAG+TGG | 0.643801 | 1.1:+61337220 | MS.gene056035:CDS |
| GTTCCATCTTCAGAACCTCA+AGG | 0.648354 | 1.1:+61338689 | MS.gene056035:CDS |
| TGTTCTCAAGAGCTGAAACA+TGG | 0.648620 | 1.1:+61339842 | MS.gene056035:CDS |
| TGACGCGGATGGCATCTCAA+GGG | 0.655838 | 1.1:+61340232 | MS.gene056035:CDS |
| CAGCTCTTGAGAACAAACAA+AGG | 0.655927 | 1.1:-61339834 | None:intergenic |
| GTTGAAGCAAACAAAGCTCG+TGG | 0.662321 | 1.1:+61335896 | MS.gene056035:CDS |
| GCCAAAGCATGGTAATAGTG+TGG | 0.663121 | 1.1:+61337161 | MS.gene056035:CDS |
| ATTGTCAGGTATCACTGGGG+AGG | 0.668154 | 1.1:-61340975 | None:intergenic |
| AGAAATAGGAATAAAACATG+AGG | 0.673697 | 1.1:+61337801 | MS.gene056035:CDS |
| AAAAGTAAAAGCTCTTGAGG+TGG | 0.678052 | 1.1:+61338834 | MS.gene056035:CDS |
| AACTTTGTCAGAAATTCCAG+GGG | 0.681708 | 1.1:-61337211 | None:intergenic |
| AATTGGAGCCTGATAATTCG+GGG | 0.683728 | 1.1:-61338311 | None:intergenic |
| ATTGGAGCCTGATAATTCGG+GGG | 0.708699 | 1.1:-61338310 | None:intergenic |
| TCATCCTACAGAATTCAATG+AGG | 0.717858 | 1.1:+61338434 | MS.gene056035:CDS |
| AAACGTGTAAACGAAACCAA+CGG | 0.720160 | 1.1:+61335866 | MS.gene056035:CDS |
| AAATCACAATAACTTTGACG+CGG | 0.726332 | 1.1:+61340217 | MS.gene056035:CDS |
| GAAACCTCCCCAATCAACGG+AGG | 0.747802 | 1.1:-61335780 | None:intergenic |
| TGAATTGTCAGGTATCACTG+GGG | 0.820446 | 1.1:-61340978 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATGATTTGTTAAA+TGG | + | chr1.1:61336398-61336417 | MS.gene056035:intron | 10.0% |
| !! | AATCTAATTATCTTACTATA+TGG | + | chr1.1:61339801-61339820 | MS.gene056035:CDS | 15.0% |
| !! | ATACTAAATCATATGTAAAT+TGG | - | chr1.1:61340712-61340731 | None:intergenic | 15.0% |
| !! | CATAATTAGCATATAAATTT+AGG | - | chr1.1:61339201-61339220 | None:intergenic | 15.0% |
| !! | CTAAATTTATATGCTAATTA+TGG | + | chr1.1:61339199-61339218 | MS.gene056035:intron | 15.0% |
| !!! | TAATCTGTGTTTATTTTTAA+AGG | + | chr1.1:61337131-61337150 | MS.gene056035:intron | 15.0% |
| !!! | TCATGTAATTAATTTTCATT+TGG | + | chr1.1:61336565-61336584 | MS.gene056035:intron | 15.0% |
| !!! | TTATGTTTTAGTAATATATG+AGG | + | chr1.1:61336998-61337017 | MS.gene056035:intron | 15.0% |
| !!! | TTCATCTTTTCATTTAAAAA+CGG | + | chr1.1:61340798-61340817 | MS.gene056035:intron | 15.0% |
| !!! | TTGAAAGTTATGTTTTTAAT+AGG | + | chr1.1:61340428-61340447 | MS.gene056035:intron | 15.0% |
| !!! | TTTTTTATGAATCAATCTTA+TGG | + | chr1.1:61337948-61337967 | MS.gene056035:intron | 15.0% |
| !! | AAAAATTGGATAATACTTAC+TGG | + | chr1.1:61338741-61338760 | MS.gene056035:intron | 20.0% |
| !! | AAACAATAACTTGAATGTTA+AGG | + | chr1.1:61336270-61336289 | MS.gene056035:CDS | 20.0% |
| !! | AAATAAACTTGTACAATCTA+TGG | - | chr1.1:61340129-61340148 | None:intergenic | 20.0% |
| !! | AAATTCATGAATGTACTTAA+TGG | - | chr1.1:61340270-61340289 | None:intergenic | 20.0% |
| !! | AACTAAATCAACATTTGTAT+TGG | - | chr1.1:61337749-61337768 | None:intergenic | 20.0% |
| !! | ATATATTCAGACATAAAGTA+TGG | + | chr1.1:61336747-61336766 | MS.gene056035:intron | 20.0% |
| !! | ATATGCTAATTATGGTTTAT+AGG | + | chr1.1:61339207-61339226 | MS.gene056035:intron | 20.0% |
| !! | CATATGATTTAGTATCTATT+TGG | + | chr1.1:61340717-61340736 | MS.gene056035:intron | 20.0% |
| !! | GCTAATTGACAAAAAAAAAA+TGG | + | chr1.1:61336504-61336523 | MS.gene056035:intron | 20.0% |
| !! | GTTCTTTCTTTCATAAAAAT+TGG | + | chr1.1:61338727-61338746 | MS.gene056035:intron | 20.0% |
| !! | TTCATAATAGCTTAAGAAAA+CGG | - | chr1.1:61336800-61336819 | None:intergenic | 20.0% |
| !! | TTTATTCGAGAAAAAATCAT+TGG | - | chr1.1:61335981-61336000 | None:intergenic | 20.0% |
| !!! | AAAAAATGGAAACTAGTTTT+AGG | + | chr1.1:61336518-61336537 | MS.gene056035:intron | 20.0% |
| !!! | AAAATTTGATAACCATAAAC+CGG | - | chr1.1:61338881-61338900 | None:intergenic | 20.0% |
| !!! | ACTAAACATAACTGATTTTA+GGG | + | chr1.1:61339542-61339561 | MS.gene056035:intron | 20.0% |
| !!! | ATGATTTTGATGATGATTTT+GGG | + | chr1.1:61338346-61338365 | MS.gene056035:CDS | 20.0% |
| !!! | CTTTTGTTTTTTATCGTAAT+GGG | + | chr1.1:61337094-61337113 | MS.gene056035:intron | 20.0% |
| !!! | GGAAATAAATTATCCTTTTT+TGG | - | chr1.1:61337517-61337536 | None:intergenic | 20.0% |
| !!! | GTCATATTTTATATATCGTA+GGG | + | chr1.1:61337841-61337860 | MS.gene056035:intron | 20.0% |
| !!! | GTGTCTAATATTTTTTGTTA+GGG | + | chr1.1:61338901-61338920 | MS.gene056035:intron | 20.0% |
| !!! | TAAAGCATAAAGCATTTATA+GGG | - | chr1.1:61336954-61336973 | None:intergenic | 20.0% |
| !!! | TACTAAACATAACTGATTTT+AGG | + | chr1.1:61339541-61339560 | MS.gene056035:intron | 20.0% |
| !!! | TCAAGACATATTTTATCAAT+GGG | - | chr1.1:61340412-61340431 | None:intergenic | 20.0% |
| !!! | TGTAATTAATTTTCATTTGG+AGG | + | chr1.1:61336568-61336587 | MS.gene056035:intron | 20.0% |
| !!! | TGTCATATTTTATATATCGT+AGG | + | chr1.1:61337840-61337859 | MS.gene056035:intron | 20.0% |
| !!! | TGTGTCTAATATTTTTTGTT+AGG | + | chr1.1:61338900-61338919 | MS.gene056035:intron | 20.0% |
| !!! | TTCAAGACATATTTTATCAA+TGG | - | chr1.1:61340413-61340432 | None:intergenic | 20.0% |
| !!! | TTGGTTTGATTTTTTAAAAG+AGG | + | chr1.1:61337870-61337889 | MS.gene056035:intron | 20.0% |
| !!! | TTTTTCTCGAATAAAAGTAA+CGG | + | chr1.1:61335986-61336005 | MS.gene056035:CDS | 20.0% |
| ! | AAAAGTGAATCAAATGAAAC+TGG | + | chr1.1:61337300-61337319 | MS.gene056035:CDS | 25.0% |
| ! | AATACTTGTCGAAAAATGTA+TGG | - | chr1.1:61340518-61340537 | None:intergenic | 25.0% |
| ! | AATTAGCTAAAAATAGCTCA+TGG | + | chr1.1:61336831-61336850 | MS.gene056035:intron | 25.0% |
| ! | ACTTGAATGTTAAGGTAAAT+TGG | + | chr1.1:61336278-61336297 | MS.gene056035:intron | 25.0% |
| ! | AGAAATAGGAATAAAACATG+AGG | + | chr1.1:61337801-61337820 | MS.gene056035:CDS | 25.0% |
| ! | AGTTAATGTTGTTGTGAAAT+TGG | + | chr1.1:61339137-61339156 | MS.gene056035:intron | 25.0% |
| ! | CAAAACACCTCTAATATATA+AGG | + | chr1.1:61340624-61340643 | MS.gene056035:intron | 25.0% |
| ! | CCATTACGATAAAAAACAAA+AGG | - | chr1.1:61337096-61337115 | None:intergenic | 25.0% |
| ! | CTGTAAAAGATAAGATTAGT+AGG | - | chr1.1:61339248-61339267 | None:intergenic | 25.0% |
| ! | CTTAGAATGTTCATTTGTAT+CGG | - | chr1.1:61338121-61338140 | None:intergenic | 25.0% |
| ! | TATCTATCAATGACTTGATA+TGG | + | chr1.1:61338211-61338230 | MS.gene056035:CDS | 25.0% |
| ! | TGGCTTCTGATAATATAAAT+TGG | - | chr1.1:61336074-61336093 | None:intergenic | 25.0% |
| ! | TTAGAATGTTCATTTGTATC+GGG | - | chr1.1:61338120-61338139 | None:intergenic | 25.0% |
| ! | TTCACAACAACATTAACTAA+TGG | - | chr1.1:61339135-61339154 | None:intergenic | 25.0% |
| ! | TTTATATTATCAGAAGCCAA+AGG | + | chr1.1:61336075-61336094 | MS.gene056035:CDS | 25.0% |
| !! | AAAAATGGATCTGATTTGAA+TGG | + | chr1.1:61336022-61336041 | MS.gene056035:CDS | 25.0% |
| !! | AAATCAACATTTGTATTGGT+TGG | - | chr1.1:61337745-61337764 | None:intergenic | 25.0% |
| !! | AATATGTTCAACCAAACTTT+TGG | + | chr1.1:61337333-61337352 | MS.gene056035:CDS | 25.0% |
| !! | AATTTTCATTTGGAGGAAAA+AGG | + | chr1.1:61336575-61336594 | MS.gene056035:intron | 25.0% |
| !! | ACAATCTGATTGTGAATTTT+TGG | + | chr1.1:61337479-61337498 | MS.gene056035:intron | 25.0% |
| !! | ATATGTTCAACCAAACTTTT+GGG | + | chr1.1:61337334-61337353 | MS.gene056035:CDS | 25.0% |
| !! | ATCAGAATTTAAAACTTCCA+AGG | - | chr1.1:61338475-61338494 | None:intergenic | 25.0% |
| !! | CAAGACATATTTTATCAATG+GGG | - | chr1.1:61340411-61340430 | None:intergenic | 25.0% |
| !! | CAAGCATTAACTTTTAACAT+AGG | - | chr1.1:61339109-61339128 | None:intergenic | 25.0% |
| !! | CTACTAATCTTATCTTTTAC+AGG | + | chr1.1:61339246-61339265 | MS.gene056035:intron | 25.0% |
| !! | GTAAAGCATAAAGCATTTAT+AGG | - | chr1.1:61336955-61336974 | None:intergenic | 25.0% |
| !! | TCTCTGATTTTTATTCATCA+GGG | + | chr1.1:61340874-61340893 | MS.gene056035:intron | 25.0% |
| !! | TTCTCTGATTTTTATTCATC+AGG | + | chr1.1:61340873-61340892 | MS.gene056035:intron | 25.0% |
| !!! | AATCAACATTTGTATTGGTT+GGG | - | chr1.1:61337744-61337763 | None:intergenic | 25.0% |
| !!! | ATGATATTTTTGAGCTCTTA+AGG | + | chr1.1:61339571-61339590 | MS.gene056035:intron | 25.0% |
| !!! | CAAGTTTTATTCTTTTGTGT+GGG | + | chr1.1:61339471-61339490 | MS.gene056035:intron | 25.0% |
| !!! | CCTTTTGTTTTTTATCGTAA+TGG | + | chr1.1:61337093-61337112 | MS.gene056035:intron | 25.0% |
| !!! | GATGATTTTGATGATGATTT+TGG | + | chr1.1:61338345-61338364 | MS.gene056035:CDS | 25.0% |
| !!! | GATTGTGAATTTTTGGTATT+AGG | + | chr1.1:61337486-61337505 | MS.gene056035:intron | 25.0% |
| !!! | GTTTCATTTGATTCACTTTT+CGG | - | chr1.1:61337300-61337319 | None:intergenic | 25.0% |
| !!! | TCAAGTTTTATTCTTTTGTG+TGG | + | chr1.1:61339470-61339489 | MS.gene056035:intron | 25.0% |
| !!! | TGATTTTGATGATGATTTTG+GGG | + | chr1.1:61338347-61338366 | MS.gene056035:CDS | 25.0% |
| !!! | TTTTTTTGTCAATTAGCTAG+TGG | - | chr1.1:61336501-61336520 | None:intergenic | 25.0% |
| AAATCACAATAACTTTGACG+CGG | + | chr1.1:61340217-61340236 | MS.gene056035:CDS | 30.0% | |
| AACACCTCTAATATATAAGG+TGG | + | chr1.1:61340627-61340646 | MS.gene056035:intron | 30.0% | |
| AACATTAAGAATTCTGCAGT+TGG | + | chr1.1:61339763-61339782 | MS.gene056035:CDS | 30.0% | |
| AAGCTTATTGAACAAATACC+TGG | - | chr1.1:61340374-61340393 | None:intergenic | 30.0% | |
| ACAATCAGACTGTTCTAATT+TGG | - | chr1.1:61338622-61338641 | None:intergenic | 30.0% | |
| ACATTAAGAATTCTGCAGTT+GGG | + | chr1.1:61339764-61339783 | MS.gene056035:CDS | 30.0% | |
| ACTTGGAGAAATTTATAGAG+TGG | + | chr1.1:61340049-61340068 | MS.gene056035:CDS | 30.0% | |
| AGATAAGATTAGTAGGAACA+AGG | - | chr1.1:61339241-61339260 | None:intergenic | 30.0% | |
| AGTATTGTGTGAATTACTGT+CGG | + | chr1.1:61339503-61339522 | MS.gene056035:intron | 30.0% | |
| ATCATCACTGTTATCCAAAT+TGG | - | chr1.1:61338331-61338350 | None:intergenic | 30.0% | |
| ATTAGAACAGTCTGATTGTA+TGG | + | chr1.1:61338623-61338642 | MS.gene056035:CDS | 30.0% | |
| CAAAGTTTAAGAACTCAAGA+TGG | - | chr1.1:61337901-61337920 | None:intergenic | 30.0% | |
| CAACATTGTTCAGATTATCA+AGG | + | chr1.1:61337443-61337462 | MS.gene056035:intron | 30.0% | |
| CAAGTCATTGATAGATAAGT+TGG | - | chr1.1:61338208-61338227 | None:intergenic | 30.0% | |
| CAGTTATTATCTATCCCAAA+AGG | + | chr1.1:61339908-61339927 | MS.gene056035:CDS | 30.0% | |
| CTATTAAAGTTGTTCTGCAT+TGG | - | chr1.1:61338177-61338196 | None:intergenic | 30.0% | |
| GAACAATGTTGCATAAAATG+AGG | - | chr1.1:61337434-61337453 | None:intergenic | 30.0% | |
| GAATTTAAGGATGCTATATC+TGG | + | chr1.1:61338534-61338553 | MS.gene056035:CDS | 30.0% | |
| GTAGTGAAATGAGAAGAAAA+GGG | + | chr1.1:61336614-61336633 | MS.gene056035:intron | 30.0% | |
| TAAGGTGGAACAAAATAAGT+TGG | + | chr1.1:61340642-61340661 | MS.gene056035:intron | 30.0% | |
| TCACAATCTCATCAATCTAA+CGG | + | chr1.1:61337604-61337623 | MS.gene056035:CDS | 30.0% | |
| TCATCAAAGTTCACATTTCT+CGG | - | chr1.1:61339340-61339359 | None:intergenic | 30.0% | |
| TCTTGTGACTTCAAATAATG+TGG | + | chr1.1:61336369-61336388 | MS.gene056035:intron | 30.0% | |
| TGATCATATTTGCATTTGGT+AGG | + | chr1.1:61339691-61339710 | MS.gene056035:intron | 30.0% | |
| TGCATGATCATATTTGCATT+TGG | + | chr1.1:61339687-61339706 | MS.gene056035:intron | 30.0% | |
| TGTAGTGAAATGAGAAGAAA+AGG | + | chr1.1:61336613-61336632 | MS.gene056035:intron | 30.0% | |
| TGTCAATCTGTTTGAATCAA+AGG | + | chr1.1:61337768-61337787 | MS.gene056035:CDS | 30.0% | |
| TGTTCCACCTTATATATTAG+AGG | - | chr1.1:61340634-61340653 | None:intergenic | 30.0% | |
| TTATTCATCAGGGCTAAATT+TGG | + | chr1.1:61340884-61340903 | MS.gene056035:intron | 30.0% | |
| TTGTAGAGTTGCAATTGTTA+GGG | - | chr1.1:61338939-61338958 | None:intergenic | 30.0% | |
| TTTATTTCCCACTGATATAG+AGG | + | chr1.1:61337528-61337547 | MS.gene056035:CDS | 30.0% | |
| ! | GGAACAAAATAAGTTGGAAT+GGG | + | chr1.1:61340648-61340667 | MS.gene056035:intron | 30.0% |
| ! | GTAGAAGAGAATTGTTGATT+TGG | - | chr1.1:61335761-61335780 | None:intergenic | 30.0% |
| ! | TGGAACAAAATAAGTTGGAA+TGG | + | chr1.1:61340647-61340666 | MS.gene056035:intron | 30.0% |
| !! | AGAGAATTGTTGATTTGGAA+AGG | - | chr1.1:61335756-61335775 | None:intergenic | 30.0% |
| !! | AGAGGCTATGCTTTTTATTA+AGG | + | chr1.1:61340751-61340770 | MS.gene056035:intron | 30.0% |
| !! | ATCAACATTTGTATTGGTTG+GGG | - | chr1.1:61337743-61337762 | None:intergenic | 30.0% |
| !! | ATGATTTTGAAGATGATTCG+TGG | + | chr1.1:61338511-61338530 | MS.gene056035:CDS | 30.0% |
| !! | ATGCTTTTTATTAAGGGAAG+TGG | + | chr1.1:61340758-61340777 | MS.gene056035:intron | 30.0% |
| !! | GAGGCTATGCTTTTTATTAA+GGG | + | chr1.1:61340752-61340771 | MS.gene056035:intron | 30.0% |
| !! | GATTTCAATTCTAGTTCCAA+GGG | + | chr1.1:61337643-61337662 | MS.gene056035:CDS | 30.0% |
| !! | TGAGCTTCTTAAAGTTTTGA+AGG | + | chr1.1:61339357-61339376 | MS.gene056035:CDS | 30.0% |
| !! | TGATAATTGCTTTTCCACTA+AGG | - | chr1.1:61336701-61336720 | None:intergenic | 30.0% |
| !! | TGATTTCAATTCTAGTTCCA+AGG | + | chr1.1:61337642-61337661 | MS.gene056035:CDS | 30.0% |
| !! | TGATTTTGAAGATGATTCGT+GGG | + | chr1.1:61338512-61338531 | MS.gene056035:CDS | 30.0% |
| !! | TGCTTTTTATTAAGGGAAGT+GGG | + | chr1.1:61340759-61340778 | MS.gene056035:intron | 30.0% |
| !! | TTTTCTGAGAGATATTCAAC+AGG | - | chr1.1:61339310-61339329 | None:intergenic | 30.0% |
| !!! | CTTTTGGGATAGATAATAAC+TGG | - | chr1.1:61339910-61339929 | None:intergenic | 30.0% |
| !!! | GGAATTGCTTTTGTTGATTT+CGG | - | chr1.1:61337719-61337738 | None:intergenic | 30.0% |
| !!! | GGAGTTTTTTAGCAAATTGA+AGG | + | chr1.1:61338644-61338663 | MS.gene056035:CDS | 30.0% |
| !!! | TTATGCTTTACTTTTTGTGC+TGG | + | chr1.1:61336964-61336983 | MS.gene056035:intron | 30.0% |
| AAAAGTAAAAGCTCTTGAGG+TGG | + | chr1.1:61338834-61338853 | MS.gene056035:CDS | 35.0% | |
| AAACGTGTAAACGAAACCAA+CGG | + | chr1.1:61335866-61335885 | MS.gene056035:CDS | 35.0% | |
| AAATGGTCCAGTAAGAAAGA+AGG | - | chr1.1:61339647-61339666 | None:intergenic | 35.0% | |
| AAATTGGAGCCTGATAATTC+GGG | - | chr1.1:61338315-61338334 | None:intergenic | 35.0% | |
| AACATTGTGTTTGAGAGAGT+TGG | - | chr1.1:61336879-61336898 | None:intergenic | 35.0% | |
| AACTTTGTCAGAAATTCCAG+GGG | - | chr1.1:61337214-61337233 | None:intergenic | 35.0% | |
| AATAACTTCAGAGGATCGTA+GGG | + | chr1.1:61338059-61338078 | MS.gene056035:CDS | 35.0% | |
| AATCAAATGAAACTGGAGCT+GGG | + | chr1.1:61337307-61337326 | MS.gene056035:CDS | 35.0% | |
| AATCTCAAGGTAGATTTCTC+AGG | + | chr1.1:61339009-61339028 | MS.gene056035:intron | 35.0% | |
| AATGGTCCAGTAAGAAAGAA+GGG | - | chr1.1:61339646-61339665 | None:intergenic | 35.0% | |
| AATTGCAACTCTACAACCTT+GGG | + | chr1.1:61338943-61338962 | MS.gene056035:intron | 35.0% | |
| ACAAAAGATTACCTACCTTG+AGG | - | chr1.1:61338707-61338726 | None:intergenic | 35.0% | |
| AGAACAAACAAAGGCAATCT+TGG | - | chr1.1:61339828-61339847 | None:intergenic | 35.0% | |
| AGATGATTCGTGGGAATTTA+AGG | + | chr1.1:61338521-61338540 | MS.gene056035:CDS | 35.0% | |
| AGTTAGTGAATGCACATTCA+TGG | + | chr1.1:61337358-61337377 | MS.gene056035:CDS | 35.0% | |
| ATATATCGTAGGGATTGTCT+TGG | + | chr1.1:61337851-61337870 | MS.gene056035:intron | 35.0% | |
| ATTCAGGTCAGTATATGTAC+CGG | + | chr1.1:61338859-61338878 | MS.gene056035:intron | 35.0% | |
| ATTGAATGCCTCTATATCAG+TGG | - | chr1.1:61337539-61337558 | None:intergenic | 35.0% | |
| CAAATTGGAGCCTGATAATT+CGG | - | chr1.1:61338316-61338335 | None:intergenic | 35.0% | |
| CAACTTTGTCAGAAATTCCA+GGG | - | chr1.1:61337215-61337234 | None:intergenic | 35.0% | |
| CACAATCTCATCAATCTAAC+GGG | + | chr1.1:61337605-61337624 | MS.gene056035:CDS | 35.0% | |
| CAGAACAACTTTAATAGTCC+TGG | + | chr1.1:61338180-61338199 | MS.gene056035:CDS | 35.0% | |
| CAGAGAAGACAAAAGATTAC+AGG | - | chr1.1:61340860-61340879 | None:intergenic | 35.0% | |
| CAGGTCAAATCTCTACTATA+CGG | - | chr1.1:61340590-61340609 | None:intergenic | 35.0% | |
| CAGTCCATTAATCTTTGGAT+TGG | - | chr1.1:61336152-61336171 | None:intergenic | 35.0% | |
| CTAAATTTGGCAACATGGAA+CGG | + | chr1.1:61340897-61340916 | MS.gene056035:CDS | 35.0% | |
| GAAACTGTGAATGGATCAAA+GGG | - | chr1.1:61335830-61335849 | None:intergenic | 35.0% | |
| GAATGATTTGAATCAGGATG+AGG | + | chr1.1:61336186-61336205 | MS.gene056035:CDS | 35.0% | |
| GAATGCGAATGATTTGAATC+AGG | + | chr1.1:61336180-61336199 | MS.gene056035:CDS | 35.0% | |
| GAGAGAATTGGAAAATCTCA+AGG | + | chr1.1:61338996-61339015 | MS.gene056035:intron | 35.0% | |
| GCTACCAATCCAAAGATTAA+TGG | + | chr1.1:61336145-61336164 | MS.gene056035:CDS | 35.0% | |
| GCTATTACACTCGTTCAAAA+GGG | - | chr1.1:61340153-61340172 | None:intergenic | 35.0% | |
| GCTATTCCTCTTTCAATCTT+CGG | + | chr1.1:61335920-61335939 | MS.gene056035:CDS | 35.0% | |
| GGATAGATAATAACTGGTCA+TGG | - | chr1.1:61339904-61339923 | None:intergenic | 35.0% | |
| GGATCAAATCAAACTTTGGT+TGG | + | chr1.1:61337384-61337403 | MS.gene056035:intron | 35.0% | |
| GTATAGTAGAGATTTGACCT+GGG | + | chr1.1:61340589-61340608 | MS.gene056035:intron | 35.0% | |
| GTGGGTCAATCTAATAAGTT+CGG | + | chr1.1:61340950-61340969 | MS.gene056035:CDS | 35.0% | |
| GTTCAGTATATCTATGCACT+TGG | + | chr1.1:61340032-61340051 | MS.gene056035:CDS | 35.0% | |
| GTTGAAGCTGAATTGATTGA+TGG | + | chr1.1:61336300-61336319 | MS.gene056035:intron | 35.0% | |
| GTTGTAGAGTTGCAATTGTT+AGG | - | chr1.1:61338940-61338959 | None:intergenic | 35.0% | |
| TAAATTTGGCAACATGGAAC+GGG | + | chr1.1:61340898-61340917 | MS.gene056035:CDS | 35.0% | |
| TAATAACTTCAGAGGATCGT+AGG | + | chr1.1:61338058-61338077 | MS.gene056035:CDS | 35.0% | |
| TATAGAGTGGCAGAAATTGT+TGG | + | chr1.1:61340062-61340081 | MS.gene056035:CDS | 35.0% | |
| TATAGTAGAGATTTGACCTG+GGG | + | chr1.1:61340590-61340609 | MS.gene056035:intron | 35.0% | |
| TCACTAACTTCCCAAAAGTT+TGG | - | chr1.1:61337347-61337366 | None:intergenic | 35.0% | |
| TCAGAGTCATACTTCAAAAC+CGG | + | chr1.1:61337682-61337701 | MS.gene056035:CDS | 35.0% | |
| TCATCCTACAGAATTCAATG+AGG | + | chr1.1:61338434-61338453 | MS.gene056035:CDS | 35.0% | |
| TCGTTTACACGTTTCTGAAT+GGG | - | chr1.1:61335860-61335879 | None:intergenic | 35.0% | |
| TGAAACATGGTGCTTATATC+TGG | + | chr1.1:61339855-61339874 | MS.gene056035:CDS | 35.0% | |
| TGAAACTGTGAATGGATCAA+AGG | - | chr1.1:61335831-61335850 | None:intergenic | 35.0% | |
| TGAAATGAGAAGAAAAGGGT+TGG | + | chr1.1:61336618-61336637 | MS.gene056035:intron | 35.0% | |
| TGATCCATTCACAGTTTCAT+CGG | + | chr1.1:61335832-61335851 | MS.gene056035:CDS | 35.0% | |
| TGCAAAAGTAAAAGCTCTTG+AGG | + | chr1.1:61338831-61338850 | MS.gene056035:CDS | 35.0% | |
| TGTAGAGTTGCAATTGTTAG+GGG | - | chr1.1:61338938-61338957 | None:intergenic | 35.0% | |
| TTAGAAAGCTCAAGATGTTG+CGG | + | chr1.1:61338792-61338811 | MS.gene056035:intron | 35.0% | |
| TTAGGCAAGAGATTCATTTC+AGG | + | chr1.1:61337032-61337051 | MS.gene056035:intron | 35.0% | |
| TTCGTTTACACGTTTCTGAA+TGG | - | chr1.1:61335861-61335880 | None:intergenic | 35.0% | |
| TTCTCCAGTCCATTAATCTT+TGG | - | chr1.1:61336157-61336176 | None:intergenic | 35.0% | |
| TTCTCGAATAAAAGTAACGG+TGG | + | chr1.1:61335989-61336008 | MS.gene056035:CDS | 35.0% | |
| TTGAATGCCTCTATATCAGT+GGG | - | chr1.1:61337538-61337557 | None:intergenic | 35.0% | |
| TTTCCTTGAGCATAGTTAGT+TGG | + | chr1.1:61336430-61336449 | MS.gene056035:intron | 35.0% | |
| ! | AATGGATCTGATTTGAATGG+TGG | + | chr1.1:61336025-61336044 | MS.gene056035:CDS | 35.0% |
| ! | ACTTGTGTTTGTCGTTTCAA+AGG | + | chr1.1:61339083-61339102 | MS.gene056035:intron | 35.0% |
| ! | AGTTGGTATTCTGATTCAAG+AGG | - | chr1.1:61339397-61339416 | None:intergenic | 35.0% |
| ! | CAATCCAAAGATTAATGGAC+TGG | + | chr1.1:61336150-61336169 | MS.gene056035:CDS | 35.0% |
| ! | CCAAAGGTTGATTCTCAAAA+TGG | + | chr1.1:61336091-61336110 | MS.gene056035:CDS | 35.0% |
| ! | GAGATTTTCCAATTCTCTCA+TGG | - | chr1.1:61338995-61339014 | None:intergenic | 35.0% |
| ! | GGCTAAAAGTTTTCCCTTTA+AGG | - | chr1.1:61336480-61336499 | None:intergenic | 35.0% |
| ! | GGTTGATTCTCAAAATGGAT+CGG | + | chr1.1:61336096-61336115 | MS.gene056035:CDS | 35.0% |
| ! | TATCAAGTGGCTTACCTTTT+GGG | - | chr1.1:61339925-61339944 | None:intergenic | 35.0% |
| ! | TATGAGGAAGCTATGCTTTT+AGG | + | chr1.1:61337014-61337033 | MS.gene056035:intron | 35.0% |
| ! | TTATCAAGTGGCTTACCTTT+TGG | - | chr1.1:61339926-61339945 | None:intergenic | 35.0% |
| ! | TTGATAGATAAGTTGGAACC+AGG | - | chr1.1:61338201-61338220 | None:intergenic | 35.0% |
| ! | TTTGGATTGACTTACGAACA+TGG | - | chr1.1:61336926-61336945 | None:intergenic | 35.0% |
| !! | ACCAAAGTTTGATTTGATCC+TGG | - | chr1.1:61337384-61337403 | None:intergenic | 35.0% |
| !! | ACTGATATAGAGGCATTCAA+TGG | + | chr1.1:61337538-61337557 | MS.gene056035:CDS | 35.0% |
| !! | ATAGAGGCATTCAATGGTAA+TGG | + | chr1.1:61337544-61337563 | MS.gene056035:CDS | 35.0% |
| !! | CCATTTTGAGAATCAACCTT+TGG | - | chr1.1:61336094-61336113 | None:intergenic | 35.0% |
| !! | GTATTAGGAAGCACCAAAAA+AGG | + | chr1.1:61337501-61337520 | MS.gene056035:intron | 35.0% |
| !! | TCAGTATATGTACCGGTTTA+TGG | + | chr1.1:61338866-61338885 | MS.gene056035:intron | 35.0% |
| !! | TGATGATTTTGGGGACTTTA+AGG | + | chr1.1:61338356-61338375 | MS.gene056035:CDS | 35.0% |
| !! | TTTCGACAAGTATTGATGCA+TGG | + | chr1.1:61340524-61340543 | MS.gene056035:intron | 35.0% |
| !!! | ATGTCGTTTTCACTTGCTTT+TGG | - | chr1.1:61338282-61338301 | None:intergenic | 35.0% |
| AAATAGACTGTCTTCACCCT+TGG | - | chr1.1:61337662-61337681 | None:intergenic | 40.0% | |
| AAGCATGGTAATAGTGTGGT+TGG | + | chr1.1:61337165-61337184 | MS.gene056035:CDS | 40.0% | |
| AAGGATGCAGACACAGAAAT+AGG | + | chr1.1:61337787-61337806 | MS.gene056035:CDS | 40.0% | |
| AATCTCATCAATCTAACGGG+CGG | + | chr1.1:61337608-61337627 | MS.gene056035:CDS | 40.0% | |
| AATCTCTACTATACGGCAGA+TGG | - | chr1.1:61340583-61340602 | None:intergenic | 40.0% | |
| AATTGGAGCCTGATAATTCG+GGG | - | chr1.1:61338314-61338333 | None:intergenic | 40.0% | |
| ACAACTCGACTAATCCTTAG+TGG | + | chr1.1:61336684-61336703 | MS.gene056035:intron | 40.0% | |
| ACATGGTGCTTATATCTGGA+AGG | + | chr1.1:61339859-61339878 | MS.gene056035:CDS | 40.0% | |
| ACCACACTATTACCATGCTT+TGG | - | chr1.1:61337165-61337184 | None:intergenic | 40.0% | |
| ACTAGCATCAAGGTTGTCTA+TGG | + | chr1.1:61339414-61339433 | MS.gene056035:CDS | 40.0% | |
| AGCATTTATAGGGCTGCATT+TGG | - | chr1.1:61336944-61336963 | None:intergenic | 40.0% | |
| AGCTTTCTCCATGAGAGAAT+TGG | + | chr1.1:61338984-61339003 | MS.gene056035:intron | 40.0% | |
| ATAGTAGAGATTTGACCTGG+GGG | + | chr1.1:61340591-61340610 | MS.gene056035:intron | 40.0% | |
| ATATTTGCATTTGGTAGGCC+GGG | + | chr1.1:61339696-61339715 | MS.gene056035:intron | 40.0% | |
| ATTGGAGATACTGGTGCATA+GGG | - | chr1.1:61338159-61338178 | None:intergenic | 40.0% | |
| CAAAAGATTACAGGCTGAAC+AGG | - | chr1.1:61340851-61340870 | None:intergenic | 40.0% | |
| CAATATGCAGGGTCCTTAAA+GGG | + | chr1.1:61336464-61336483 | MS.gene056035:intron | 40.0% | |
| CAATTGCAACTCTACAACCT+TGG | + | chr1.1:61338942-61338961 | MS.gene056035:intron | 40.0% | |
| CAGAATACCAACTAGCATCA+AGG | + | chr1.1:61339404-61339423 | MS.gene056035:CDS | 40.0% | |
| CAGCTCTTGAGAACAAACAA+AGG | - | chr1.1:61339837-61339856 | None:intergenic | 40.0% | |
| CATATTTGCATTTGGTAGGC+CGG | + | chr1.1:61339695-61339714 | MS.gene056035:intron | 40.0% | |
| CCAACTTTGTCAGAAATTCC+AGG | - | chr1.1:61337216-61337235 | None:intergenic | 40.0% | |
| CCATCCTCATTGAATTCTGT+AGG | - | chr1.1:61338441-61338460 | None:intergenic | 40.0% | |
| CCTACAGAATTCAATGAGGA+TGG | + | chr1.1:61338438-61338457 | MS.gene056035:CDS | 40.0% | |
| CCTGGAATTTCTGACAAAGT+TGG | + | chr1.1:61337213-61337232 | MS.gene056035:CDS | 40.0% | |
| CGAATTATCAGGCTCCAATT+TGG | + | chr1.1:61338314-61338333 | MS.gene056035:CDS | 40.0% | |
| CGTATAGTAGAGATTTGACC+TGG | + | chr1.1:61340588-61340607 | MS.gene056035:intron | 40.0% | |
| CTACCAACTAACTATGCTCA+AGG | - | chr1.1:61336436-61336455 | None:intergenic | 40.0% | |
| GAAGAAGACGATGAAAGCTT+CGG | + | chr1.1:61335713-61335732 | MS.gene056035:CDS | 40.0% | |
| GAATCAAATGAAACTGGAGC+TGG | + | chr1.1:61337306-61337325 | MS.gene056035:CDS | 40.0% | |
| GACGGATATAAAATCTGCCA+TGG | + | chr1.1:61339718-61339737 | MS.gene056035:CDS | 40.0% | |
| GAGATTGTGATGCAAGAGAT+GGG | - | chr1.1:61337594-61337613 | None:intergenic | 40.0% | |
| GATTCAAGAGGTAGGAACTT+TGG | - | chr1.1:61339385-61339404 | None:intergenic | 40.0% | |
| GCCAGGATCAAATCAAACTT+TGG | + | chr1.1:61337380-61337399 | MS.gene056035:CDS | 40.0% | |
| GGAATTCAAGTCTGCAGAAT+GGG | + | chr1.1:61336240-61336259 | MS.gene056035:CDS | 40.0% | |
| GGCTATTACACTCGTTCAAA+AGG | - | chr1.1:61340154-61340173 | None:intergenic | 40.0% | |
| GGTATTCTGATTCAAGAGGT+AGG | - | chr1.1:61339393-61339412 | None:intergenic | 40.0% | |
| GGTTGGAAAGAAATGCAAGT+GGG | + | chr1.1:61336635-61336654 | MS.gene056035:intron | 40.0% | |
| TAGACAACCTTGATGCTAGT+TGG | - | chr1.1:61339414-61339433 | None:intergenic | 40.0% | |
| TAGAGACACTGCAATATGCA+GGG | + | chr1.1:61336453-61336472 | MS.gene056035:intron | 40.0% | |
| TATTTGGATCGATAGCTCAG+AGG | + | chr1.1:61340733-61340752 | MS.gene056035:intron | 40.0% | |
| TCATCGCCAAAAATTGACAG+AGG | - | chr1.1:61338093-61338112 | None:intergenic | 40.0% | |
| TCGAATAAAAGTAACGGTGG+TGG | + | chr1.1:61335992-61336011 | MS.gene056035:CDS | 40.0% | |
| TCGATACCCTTCTTTCTTAC+TGG | + | chr1.1:61339637-61339656 | MS.gene056035:intron | 40.0% | |
| TCTCTTCAACTTGACTCCTT+TGG | + | chr1.1:61340557-61340576 | MS.gene056035:intron | 40.0% | |
| TGAACGAGTGTAATAGCCTA+TGG | + | chr1.1:61340156-61340175 | MS.gene056035:CDS | 40.0% | |
| TGAGATTGTGATGCAAGAGA+TGG | - | chr1.1:61337595-61337614 | None:intergenic | 40.0% | |
| TGCATCTTTCAAGAGTTCCA+TGG | - | chr1.1:61339738-61339757 | None:intergenic | 40.0% | |
| TGCTTATATCTGGAAGGAAG+CGG | + | chr1.1:61339865-61339884 | MS.gene056035:CDS | 40.0% | |
| TGTTCTCAAGAGCTGAAACA+TGG | + | chr1.1:61339842-61339861 | MS.gene056035:CDS | 40.0% | |
| TTGGAAGAAGCAGAAACAAC+AGG | - | chr1.1:61335962-61335981 | None:intergenic | 40.0% | |
| TTGTTCTGCATTGGAGATAC+TGG | - | chr1.1:61338168-61338187 | None:intergenic | 40.0% | |
| TTTGCGAGATTGACGAAGTA+GGG | - | chr1.1:61340927-61340946 | None:intergenic | 40.0% | |
| ! | AAGTGTTTTGTGCAGATTCC+TGG | - | chr1.1:61338407-61338426 | None:intergenic | 40.0% |
| ! | ACAAGTGCTGTCAAGCTAAA+TGG | - | chr1.1:61339664-61339683 | None:intergenic | 40.0% |
| ! | AGTGTTTTGTGCAGATTCCT+GGG | - | chr1.1:61338406-61338425 | None:intergenic | 40.0% |
| ! | CTGGGCATGATTTTATCAAG+TGG | - | chr1.1:61339938-61339957 | None:intergenic | 40.0% |
| ! | GATGAGGATGATGATGATGA+TGG | + | chr1.1:61336214-61336233 | MS.gene056035:CDS | 40.0% |
| ! | GTGTTGATCAATTCACTGTC+TGG | + | chr1.1:61336657-61336676 | MS.gene056035:intron | 40.0% |
| ! | TCTGATTTGAATGGTGGTGT+TGG | + | chr1.1:61336031-61336050 | MS.gene056035:CDS | 40.0% |
| !! | AACATTTGTATTGGTTGGGG+AGG | - | chr1.1:61337740-61337759 | None:intergenic | 40.0% |
| !! | AGGATGATGATGATGATGGA+TGG | + | chr1.1:61336218-61336237 | MS.gene056035:CDS | 40.0% |
| !! | CGATCCTCTGAAGTTATTAG+CGG | - | chr1.1:61338057-61338076 | None:intergenic | 40.0% |
| !! | GGATGATGATGATGATGGAT+GGG | + | chr1.1:61336219-61336238 | MS.gene056035:CDS | 40.0% |
| !! | TTTCTGACAAAGTTGGTGAG+TGG | + | chr1.1:61337220-61337239 | MS.gene056035:CDS | 40.0% |
| !! | TTTGATTCACTTTTCGGACC+TGG | - | chr1.1:61337294-61337313 | None:intergenic | 40.0% |
| !! | TTTTGATAGTTTACTCCCCC+AGG | - | chr1.1:61340609-61340628 | None:intergenic | 40.0% |
| AACCATACCACACTAGGCTT+GGG | - | chr1.1:61339060-61339079 | None:intergenic | 45.0% | |
| AACTCTACAACCTTGGGAAG+GGG | + | chr1.1:61338949-61338968 | MS.gene056035:intron | 45.0% | |
| AATTCTGCAGTTGGGATCAG+GGG | + | chr1.1:61339772-61339791 | MS.gene056035:CDS | 45.0% | |
| AGAATTCTGCAGTTGGGATC+AGG | + | chr1.1:61339770-61339789 | MS.gene056035:CDS | 45.0% | |
| AGCTCTTGAGGTGGAAATTC+AGG | + | chr1.1:61338843-61338862 | MS.gene056035:CDS | 45.0% | |
| AGTCACAACCATACCACACT+AGG | - | chr1.1:61339066-61339085 | None:intergenic | 45.0% | |
| ATGGAACCTGACAACATCCA+TGG | - | chr1.1:61340110-61340129 | None:intergenic | 45.0% | |
| ATTGGAGCCTGATAATTCGG+GGG | - | chr1.1:61338313-61338332 | None:intergenic | 45.0% | |
| CAACTCTACAACCTTGGGAA+GGG | + | chr1.1:61338948-61338967 | MS.gene056035:intron | 45.0% | |
| CACAAACCATGGATGTTGTC+AGG | + | chr1.1:61340101-61340120 | MS.gene056035:CDS | 45.0% | |
| CACAATAACTTTGACGCGGA+TGG | + | chr1.1:61340221-61340240 | MS.gene056035:CDS | 45.0% | |
| CAGGGCTAAATTTGGCAACA+TGG | + | chr1.1:61340892-61340911 | MS.gene056035:intron | 45.0% | |
| CATCTTCAGAACCTCAAGGT+AGG | + | chr1.1:61338693-61338712 | MS.gene056035:intron | 45.0% | |
| CATTGGAGATACTGGTGCAT+AGG | - | chr1.1:61338160-61338179 | None:intergenic | 45.0% | |
| CGAGTGTAATAGCCTATGGT+TGG | + | chr1.1:61340160-61340179 | MS.gene056035:CDS | 45.0% | |
| CGGCAAAACTTCACAAACCA+TGG | + | chr1.1:61340090-61340109 | MS.gene056035:CDS | 45.0% | |
| CGTCAATCTCGCAAACTTGT+GGG | + | chr1.1:61340932-61340951 | MS.gene056035:CDS | 45.0% | |
| CTGAAGTTATTAGCGGCTTC+TGG | - | chr1.1:61338050-61338069 | None:intergenic | 45.0% | |
| CTTCAGAGCTATGTCATCTC+AGG | + | chr1.1:61340302-61340321 | MS.gene056035:CDS | 45.0% | |
| GAAGCCGCTAATAACTTCAG+AGG | + | chr1.1:61338050-61338069 | MS.gene056035:intron | 45.0% | |
| GAATTCTGCAGTTGGGATCA+GGG | + | chr1.1:61339771-61339790 | MS.gene056035:CDS | 45.0% | |
| GATTTCGGCGTGATTGTTTC+CGG | - | chr1.1:61337704-61337723 | None:intergenic | 45.0% | |
| GCAATATGCAGGGTCCTTAA+AGG | + | chr1.1:61336463-61336482 | MS.gene056035:intron | 45.0% | |
| GCCAAAAATTGACAGAGGCA+AGG | - | chr1.1:61338088-61338107 | None:intergenic | 45.0% | |
| GCCAAAGCATGGTAATAGTG+TGG | + | chr1.1:61337161-61337180 | MS.gene056035:CDS | 45.0% | |
| GGATCCGATGAAACTGTGAA+TGG | - | chr1.1:61335839-61335858 | None:intergenic | 45.0% | |
| GGCAGAAATTGTTGGAGCTT+CGG | + | chr1.1:61340070-61340089 | MS.gene056035:CDS | 45.0% | |
| GGGAATTCAAGTCTGCAGAA+TGG | + | chr1.1:61336239-61336258 | MS.gene056035:CDS | 45.0% | |
| GGGTTGGAAAGAAATGCAAG+TGG | + | chr1.1:61336634-61336653 | MS.gene056035:intron | 45.0% | |
| GTAGAGACACTGCAATATGC+AGG | + | chr1.1:61336452-61336471 | MS.gene056035:intron | 45.0% | |
| GTTCCATCTTCAGAACCTCA+AGG | + | chr1.1:61338689-61338708 | MS.gene056035:CDS | 45.0% | |
| GTTGAAGCAAACAAAGCTCG+TGG | + | chr1.1:61335896-61335915 | MS.gene056035:CDS | 45.0% | |
| GTTTGCGAGATTGACGAAGT+AGG | - | chr1.1:61340928-61340947 | None:intergenic | 45.0% | |
| TCAAGATGTTGCGGCTCTTT+CGG | + | chr1.1:61338801-61338820 | MS.gene056035:CDS | 45.0% | |
| TCCTCACCGAAGATTGAAAG+AGG | - | chr1.1:61335929-61335948 | None:intergenic | 45.0% | |
| TCCTCTTTCAATCTTCGGTG+AGG | + | chr1.1:61335925-61335944 | MS.gene056035:CDS | 45.0% | |
| TCGTCAATCTCGCAAACTTG+TGG | + | chr1.1:61340931-61340950 | MS.gene056035:CDS | 45.0% | |
| TCTCTTCTACCTCCGTTGAT+TGG | + | chr1.1:61335771-61335790 | MS.gene056035:CDS | 45.0% | |
| TGCTTCAACAGAAACACCGT+TGG | - | chr1.1:61335885-61335904 | None:intergenic | 45.0% | |
| TTTGAATCAGGATGAGGACG+AGG | + | chr1.1:61336192-61336211 | MS.gene056035:CDS | 45.0% | |
| ! | ATCTCATCAATCTAACGGGC+GGG | + | chr1.1:61337609-61337628 | MS.gene056035:CDS | 45.0% |
| ! | CTCTTCTACCTCCGTTGATT+GGG | + | chr1.1:61335772-61335791 | MS.gene056035:CDS | 45.0% |
| ! | GCCTTGCCTCTGTCAATTTT+TGG | + | chr1.1:61338084-61338103 | MS.gene056035:CDS | 45.0% |
| ! | GGCAGATTTTATATCCGTCC+CGG | - | chr1.1:61339717-61339736 | None:intergenic | 45.0% |
| ! | GGTAATAGTGTGGTTGGTGT+TGG | + | chr1.1:61337171-61337190 | MS.gene056035:CDS | 45.0% |
| ! | TCTTCTACCTCCGTTGATTG+GGG | + | chr1.1:61335773-61335792 | MS.gene056035:CDS | 45.0% |
| !! | AAAGTTGGTGAGTGGCACTT+GGG | + | chr1.1:61337228-61337247 | MS.gene056035:CDS | 45.0% |
| !! | AATAGCCTATGGTTGGCTTC+AGG | + | chr1.1:61340167-61340186 | MS.gene056035:CDS | 45.0% |
| !! | CTACCTTGAGGTTCTGAAGA+TGG | - | chr1.1:61338695-61338714 | None:intergenic | 45.0% |
| !! | GAGGCATTCAATGGTAATGG+TGG | + | chr1.1:61337547-61337566 | MS.gene056035:CDS | 45.0% |
| !! | TGAGGTTCTGAAGATGGAAC+AGG | - | chr1.1:61338689-61338708 | None:intergenic | 45.0% |
| !!! | CTTGCTTTTGGTGTCACATC+AGG | - | chr1.1:61338270-61338289 | None:intergenic | 45.0% |
| AAGTCTGCAGAATGGGAAGC+TGG | + | chr1.1:61336247-61336266 | MS.gene056035:CDS | 50.0% | |
| ACAACCTTGGGAAGGGGATA+GGG | + | chr1.1:61338955-61338974 | MS.gene056035:intron | 50.0% | |
| ACCATACCACACTAGGCTTG+GGG | - | chr1.1:61339059-61339078 | None:intergenic | 50.0% | |
| ACTATACGGCAGATGGCCAA+AGG | - | chr1.1:61340576-61340595 | None:intergenic | 50.0% | |
| ATACCTGGTATGCAACCAGC+AGG | - | chr1.1:61340359-61340378 | None:intergenic | 50.0% | |
| CAACCATACCACACTAGGCT+TGG | - | chr1.1:61339061-61339080 | None:intergenic | 50.0% | |
| CAAGATGTTGCGGCTCTTTC+GGG | + | chr1.1:61338802-61338821 | MS.gene056035:CDS | 50.0% | |
| CAAGTCCTGAAGCCAACCAT+AGG | - | chr1.1:61340175-61340194 | None:intergenic | 50.0% | |
| CATGTCTCCCCCGAATTATC+AGG | + | chr1.1:61338303-61338322 | MS.gene056035:CDS | 50.0% | |
| CTGAACACCTATGTCAACCC+AGG | - | chr1.1:61340018-61340037 | None:intergenic | 50.0% | |
| GACGAAACCTCCCCAATCAA+CGG | - | chr1.1:61335786-61335805 | None:intergenic | 50.0% | |
| GATTGGGGAGGTTTCGTCAA+TGG | + | chr1.1:61335788-61335807 | MS.gene056035:CDS | 50.0% | |
| GCAACTCTACAACCTTGGGA+AGG | + | chr1.1:61338947-61338966 | MS.gene056035:intron | 50.0% | |
| GGGCTGTGAGATGCAGAAAT+AGG | - | chr1.1:61337267-61337286 | None:intergenic | 50.0% | |
| GTGAATGCACATTCATGGCC+AGG | + | chr1.1:61337363-61337382 | MS.gene056035:CDS | 50.0% | |
| TACAACCTTGGGAAGGGGAT+AGG | + | chr1.1:61338954-61338973 | MS.gene056035:intron | 50.0% | |
| TACAGGCTGAACAGGATGCT+AGG | - | chr1.1:61340843-61340862 | None:intergenic | 50.0% | |
| TGCAGATTCCTGGGCGAATT+GGG | - | chr1.1:61338397-61338416 | None:intergenic | 50.0% | |
| ! | AAGGTTGAAGCGCCAAAGCA+TGG | + | chr1.1:61337150-61337169 | MS.gene056035:intron | 50.0% |
| ! | GCTTTGTTGGATTCATCCCC+TGG | + | chr1.1:61337195-61337214 | MS.gene056035:CDS | 50.0% |
| ! | TCTCATCAATCTAACGGGCG+GGG | + | chr1.1:61337610-61337629 | MS.gene056035:CDS | 50.0% |
| !! | AAGTTGGTGAGTGGCACTTG+GGG | + | chr1.1:61337229-61337248 | MS.gene056035:CDS | 50.0% |
| !! | ATGTGCTGCTGTGCTGCTTA+TGG | + | chr1.1:61339960-61339979 | MS.gene056035:intron | 50.0% |
| !! | CAAAGTTGGTGAGTGGCACT+TGG | + | chr1.1:61337227-61337246 | MS.gene056035:CDS | 50.0% |
| !! | GGATGGATTGCAGACTTCCT+TGG | + | chr1.1:61338455-61338474 | MS.gene056035:CDS | 50.0% |
| !! | GGTGGTGGTGCTGTGAAAAA+TGG | + | chr1.1:61336007-61336026 | MS.gene056035:CDS | 50.0% |
| !! | GGTTGGTGTTGGTGCTTTGT+TGG | + | chr1.1:61337182-61337201 | MS.gene056035:CDS | 50.0% |
| ACCCCAAGCCTAGTGTGGTA+TGG | + | chr1.1:61339055-61339074 | MS.gene056035:intron | 55.0% | |
| ACCTGAAACCCAATTCGCCC+AGG | + | chr1.1:61338386-61338405 | MS.gene056035:CDS | 55.0% | |
| ATTCCCCTATCCCCTTCCCA+AGG | - | chr1.1:61338962-61338981 | None:intergenic | 55.0% | |
| CAACCCAGGACCGCAGAAAA+AGG | - | chr1.1:61340004-61340023 | None:intergenic | 55.0% | |
| CAACCTTGGGAAGGGGATAG+GGG | + | chr1.1:61338956-61338975 | MS.gene056035:intron | 55.0% | |
| CAGCACAGCAGCACATGACT+GGG | - | chr1.1:61339956-61339975 | None:intergenic | 55.0% | |
| GAAACCTCCCCAATCAACGG+AGG | - | chr1.1:61335783-61335802 | None:intergenic | 55.0% | |
| GTGCAGATTCCTGGGCGAAT+TGG | - | chr1.1:61338398-61338417 | None:intergenic | 55.0% | |
| TCAGGATGAGGACGAGGATG+AGG | + | chr1.1:61336198-61336217 | MS.gene056035:CDS | 55.0% | |
| TCCTGGGCGAATTGGGTTTC+AGG | - | chr1.1:61338390-61338409 | None:intergenic | 55.0% | |
| TGACGCGGATGGCATCTCAA+GGG | + | chr1.1:61340232-61340251 | MS.gene056035:CDS | 55.0% | |
| TGGGGAGGTTTCGTCAATGG+CGG | + | chr1.1:61335791-61335810 | MS.gene056035:CDS | 55.0% | |
| TGGTATGCAACCAGCAGGCA+AGG | - | chr1.1:61340354-61340373 | None:intergenic | 55.0% | |
| TTGACGCGGATGGCATCTCA+AGG | + | chr1.1:61340231-61340250 | MS.gene056035:CDS | 55.0% | |
| TTGCATTTGGTAGGCCGGGA+CGG | + | chr1.1:61339700-61339719 | MS.gene056035:intron | 55.0% | |
| ! | TCTACCTCCGTTGATTGGGG+AGG | + | chr1.1:61335776-61335795 | MS.gene056035:CDS | 55.0% |
| ! | TTGCCTGCTGGTTGCATACC+AGG | + | chr1.1:61340353-61340372 | MS.gene056035:CDS | 55.0% |
| !! | TCACTTTTCGGACCTGGCTG+CGG | - | chr1.1:61337288-61337307 | None:intergenic | 55.0% |
| CAGCAGGCAAGGCTGACAAC+TGG | - | chr1.1:61340343-61340362 | None:intergenic | 60.0% | |
| CAGTTGTCAGCCTTGCCTGC+TGG | + | chr1.1:61340341-61340360 | MS.gene056035:CDS | 60.0% | |
| CCACACTAGGCTTGGGGTTC+TGG | - | chr1.1:61339053-61339072 | None:intergenic | 60.0% | |
| CCAGAACCCCAAGCCTAGTG+TGG | + | chr1.1:61339050-61339069 | MS.gene056035:intron | 60.0% | |
| GCAGCACAGCAGCACATGAC+TGG | - | chr1.1:61339957-61339976 | None:intergenic | 60.0% | |
| GGGGAGGTTTCGTCAATGGC+GGG | + | chr1.1:61335792-61335811 | MS.gene056035:CDS | 60.0% | |
| ! | CAATCTAACGGGCGGGGCTT+TGG | + | chr1.1:61337616-61337635 | MS.gene056035:CDS | 60.0% |
| ! | CACTTTTCGGACCTGGCTGC+GGG | - | chr1.1:61337287-61337306 | None:intergenic | 60.0% |
| ! | CTGCGGTCCTGGGTTGACAT+AGG | + | chr1.1:61340008-61340027 | MS.gene056035:intron | 60.0% |
| GCATCTCACAGCCCGCAGCC+AGG | + | chr1.1:61337273-61337292 | MS.gene056035:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 61335701 | 61340986 | 61335701 | ID=MS.gene056035 |
| chr1.1 | mRNA | 61335701 | 61340986 | 61335701 | ID=MS.gene056035.t1;Parent=MS.gene056035 |
| chr1.1 | exon | 61335701 | 61336291 | 61335701 | ID=MS.gene056035.t1.exon1;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61335701 | 61336291 | 61335701 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61337153 | 61337401 | 61337153 | ID=MS.gene056035.t1.exon2;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61337153 | 61337401 | 61337153 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61337508 | 61337822 | 61337508 | ID=MS.gene056035.t1.exon3;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61337508 | 61337822 | 61337508 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61338051 | 61338710 | 61338051 | ID=MS.gene056035.t1.exon4;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61338051 | 61338710 | 61338051 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61338796 | 61338864 | 61338796 | ID=MS.gene056035.t1.exon5;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61338796 | 61338864 | 61338796 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61339268 | 61339435 | 61339268 | ID=MS.gene056035.t1.exon6;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61339268 | 61339435 | 61339268 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61339713 | 61339929 | 61339713 | ID=MS.gene056035.t1.exon7;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61339713 | 61339929 | 61339713 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61340030 | 61340374 | 61340030 | ID=MS.gene056035.t1.exon8;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61340030 | 61340374 | 61340030 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| chr1.1 | exon | 61340895 | 61340986 | 61340895 | ID=MS.gene056035.t1.exon9;Parent=MS.gene056035.t1 |
| chr1.1 | CDS | 61340895 | 61340986 | 61340895 | ID=cds.MS.gene056035.t1;Parent=MS.gene056035.t1 |
| Gene Sequence |
| Protein sequence |
