Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44379.t1 | XP_024640294.1 | 98 | 256 | 5 | 0 | 1 | 256 | 1 | 256 | 7.60E-142 | 513.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44379.t1 | P27141 | 72.0 | 257 | 71 | 1 | 1 | 256 | 65 | 321 | 7.5e-106 | 384.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44379.t1 | G7K1D3 | 98.0 | 256 | 5 | 0 | 1 | 256 | 1 | 256 | 5.5e-142 | 513.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061224 | MS.gene44379 | 0.81739 | 3.38E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44379.t1 | MTR_5g034250 | 98.047 | 256 | 5 | 0 | 1 | 256 | 23 | 278 | 0.0 | 521 |
| MS.gene44379.t1 | MTR_5g034250 | 98.047 | 256 | 5 | 0 | 1 | 256 | 1 | 256 | 0.0 | 521 |
| MS.gene44379.t1 | MTR_8g064630 | 81.176 | 255 | 47 | 1 | 1 | 255 | 1 | 254 | 1.61e-156 | 435 |
| MS.gene44379.t1 | MTR_6g006990 | 63.320 | 259 | 90 | 1 | 3 | 256 | 2 | 260 | 1.00e-120 | 345 |
| MS.gene44379.t1 | MTR_6g006990 | 63.320 | 259 | 90 | 1 | 3 | 256 | 73 | 331 | 3.28e-120 | 346 |
| MS.gene44379.t1 | MTR_8g064630 | 85.143 | 175 | 25 | 1 | 81 | 255 | 6 | 179 | 3.54e-111 | 318 |
| MS.gene44379.t1 | MTR_3g077910 | 54.086 | 257 | 117 | 1 | 1 | 256 | 33 | 289 | 8.96e-93 | 275 |
| MS.gene44379.t1 | MTR_3g077940 | 52.140 | 257 | 122 | 1 | 1 | 256 | 1 | 257 | 1.98e-91 | 270 |
| MS.gene44379.t1 | MTR_6g006990 | 61.463 | 205 | 74 | 1 | 3 | 202 | 73 | 277 | 1.70e-89 | 266 |
| MS.gene44379.t1 | MTR_3g077940 | 57.068 | 191 | 82 | 0 | 66 | 256 | 28 | 218 | 4.07e-74 | 225 |
| MS.gene44379.t1 | MTR_2g009500 | 51.777 | 197 | 92 | 2 | 52 | 248 | 89 | 282 | 4.44e-71 | 220 |
| MS.gene44379.t1 | MTR_5g066060 | 50.254 | 197 | 96 | 2 | 52 | 248 | 94 | 288 | 5.41e-64 | 202 |
| MS.gene44379.t1 | MTR_5g066060 | 51.299 | 154 | 73 | 2 | 52 | 205 | 94 | 245 | 1.49e-46 | 156 |
| MS.gene44379.t1 | MTR_3g077930 | 48.000 | 175 | 68 | 3 | 82 | 256 | 40 | 191 | 1.29e-41 | 141 |
| MS.gene44379.t1 | MTR_5g066060 | 50.000 | 98 | 41 | 2 | 52 | 149 | 94 | 183 | 1.02e-24 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44379.t1 | AT5G14740 | 69.498 | 259 | 76 | 1 | 1 | 256 | 1 | 259 | 2.69e-134 | 379 |
| MS.gene44379.t1 | AT5G14740 | 69.498 | 259 | 76 | 1 | 1 | 256 | 1 | 259 | 2.69e-134 | 379 |
| MS.gene44379.t1 | AT5G14740 | 69.498 | 259 | 76 | 1 | 1 | 256 | 1 | 259 | 2.69e-134 | 379 |
| MS.gene44379.t1 | AT5G14740 | 69.498 | 259 | 76 | 1 | 1 | 256 | 1 | 259 | 2.69e-134 | 379 |
| MS.gene44379.t1 | AT5G14740 | 69.498 | 259 | 76 | 1 | 1 | 256 | 1 | 259 | 2.69e-134 | 379 |
| MS.gene44379.t1 | AT5G14740 | 69.498 | 259 | 76 | 1 | 1 | 256 | 73 | 331 | 7.21e-133 | 378 |
| MS.gene44379.t1 | AT5G14740 | 69.112 | 259 | 76 | 2 | 1 | 256 | 73 | 330 | 2.20e-130 | 372 |
| MS.gene44379.t1 | AT5G14740 | 68.340 | 259 | 78 | 2 | 1 | 256 | 73 | 330 | 3.24e-129 | 369 |
| MS.gene44379.t1 | AT3G01500 | 65.637 | 259 | 86 | 1 | 1 | 256 | 1 | 259 | 2.74e-125 | 356 |
| MS.gene44379.t1 | AT1G70410 | 66.016 | 256 | 86 | 1 | 1 | 255 | 1 | 256 | 3.63e-125 | 356 |
| MS.gene44379.t1 | AT1G70410 | 66.016 | 256 | 86 | 1 | 1 | 255 | 1 | 256 | 3.63e-125 | 356 |
| MS.gene44379.t1 | AT3G01500 | 65.637 | 259 | 86 | 1 | 1 | 256 | 1 | 259 | 4.06e-125 | 356 |
| MS.gene44379.t1 | AT1G70410 | 65.759 | 257 | 87 | 1 | 1 | 256 | 23 | 279 | 2.94e-124 | 355 |
| MS.gene44379.t1 | AT3G01500 | 65.637 | 259 | 86 | 1 | 1 | 256 | 78 | 336 | 7.56e-124 | 355 |
| MS.gene44379.t1 | AT3G01500 | 65.637 | 259 | 86 | 1 | 1 | 256 | 78 | 336 | 1.26e-123 | 355 |
| MS.gene44379.t1 | AT1G23730 | 62.646 | 257 | 95 | 1 | 1 | 256 | 1 | 257 | 4.72e-122 | 348 |
| MS.gene44379.t1 | AT1G23730 | 62.646 | 257 | 95 | 1 | 1 | 256 | 1 | 257 | 4.72e-122 | 348 |
| MS.gene44379.t1 | AT5G14740 | 68.293 | 205 | 62 | 1 | 1 | 202 | 73 | 277 | 1.90e-100 | 295 |
| MS.gene44379.t1 | AT4G33580 | 45.339 | 236 | 120 | 5 | 18 | 248 | 48 | 279 | 5.24e-64 | 202 |
| MS.gene44379.t1 | AT4G33580 | 45.339 | 236 | 120 | 5 | 18 | 248 | 48 | 279 | 5.24e-64 | 202 |
| MS.gene44379.t1 | AT4G33580 | 45.148 | 237 | 120 | 6 | 18 | 248 | 48 | 280 | 2.62e-63 | 200 |
| MS.gene44379.t1 | AT1G58180 | 39.271 | 247 | 147 | 2 | 1 | 247 | 30 | 273 | 6.65e-61 | 194 |
| MS.gene44379.t1 | AT1G58180 | 39.271 | 247 | 147 | 2 | 1 | 247 | 30 | 273 | 6.65e-61 | 194 |
| MS.gene44379.t1 | AT1G58180 | 41.441 | 222 | 129 | 1 | 26 | 247 | 2 | 222 | 2.88e-60 | 191 |
| MS.gene44379.t1 | AT1G58180 | 41.441 | 222 | 129 | 1 | 26 | 247 | 2 | 222 | 2.88e-60 | 191 |
| MS.gene44379.t1 | AT1G58180 | 41.441 | 222 | 129 | 1 | 26 | 247 | 2 | 222 | 2.88e-60 | 191 |
| MS.gene44379.t1 | AT1G58180 | 40.625 | 224 | 130 | 2 | 1 | 224 | 30 | 250 | 4.52e-56 | 180 |
| MS.gene44379.t1 | AT1G58180 | 40.594 | 202 | 117 | 2 | 1 | 202 | 30 | 228 | 5.42e-48 | 160 |
Find 77 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCTTCTGTATCCATTTA+AGG | 0.107949 | 5.1:+25174226 | MS.gene44379:CDS |
| ACCTTGCTGGATTGCAAATT+TGG | 0.156469 | 5.1:-25173840 | None:intergenic |
| AGTATGCCCTTCTCACATTT+TGG | 0.186284 | 5.1:+25170814 | MS.gene44379:CDS |
| GTTGAGAATATTGTAGTTAT+TGG | 0.204310 | 5.1:+25172860 | MS.gene44379:CDS |
| ATATGCGGTCTTACATTTAA+AGG | 0.280127 | 5.1:+25171548 | MS.gene44379:CDS |
| GACCTTAGGGCTCTGGCCTT+TGG | 0.303340 | 5.1:-25170443 | None:intergenic |
| CGCCCCTGCTCCCGAATACT+TGG | 0.306885 | 5.1:-25171517 | None:intergenic |
| AATTTAACCTTGGACCTTGC+TGG | 0.313505 | 5.1:-25173853 | None:intergenic |
| CAGCTGCTGTGGAGGCATAA+AGG | 0.320529 | 5.1:+25172886 | MS.gene44379:CDS |
| AGCTGCTGTGGAGGCATAAA+GGG | 0.327110 | 5.1:+25172887 | MS.gene44379:CDS |
| GGTGTTGGAGAGACCTTAAA+TGG | 0.356865 | 5.1:-25174239 | None:intergenic |
| GGAGCTGACGGCGGAGTTAG+AGG | 0.369439 | 5.1:+25169607 | MS.gene44379:CDS |
| CAGTGATTTCATTGAGCAAT+GGG | 0.388371 | 5.1:+25173816 | MS.gene44379:intron |
| CCAACCGGGTGAAGCCTTTG+TGG | 0.395118 | 5.1:+25170841 | MS.gene44379:CDS |
| ATCCTCTCATCCGGGTTAAA+CGG | 0.445021 | 5.1:-25169644 | None:intergenic |
| GAAAAGTAAACCTTGTCATA+TGG | 0.446345 | 5.1:-25170890 | None:intergenic |
| CTCATGTCTATCCGAGATGA+TGG | 0.452359 | 5.1:+25172911 | MS.gene44379:CDS |
| GAACCATGTTGGCGATGTTA+CGG | 0.461219 | 5.1:-25170865 | None:intergenic |
| GTTAAACGGCTTTGAACCGT+TGG | 0.469755 | 5.1:-25169630 | None:intergenic |
| CCGGATCGGATCCTCTCATC+CGG | 0.470107 | 5.1:-25169653 | None:intergenic |
| GAAGCTGTGAATGTATCTCT+TGG | 0.472140 | 5.1:+25174082 | MS.gene44379:CDS |
| GCAAGTTCACCGTACAGCTC+AGG | 0.475420 | 5.1:-25170421 | None:intergenic |
| AGTCTTGAAACTAACAAAAC+CGG | 0.477828 | 5.1:-25169672 | None:intergenic |
| ACAACACCATCTCTCACAAA+TGG | 0.478188 | 5.1:-25174121 | None:intergenic |
| CAGACCAAGTATTCGGGAGC+AGG | 0.489426 | 5.1:+25171513 | MS.gene44379:intron |
| CGGTTCAAAGCCGTTTAACC+CGG | 0.492215 | 5.1:+25169634 | MS.gene44379:CDS |
| ATGTAAGACCGCATATTCAA+TGG | 0.508542 | 5.1:-25171541 | None:intergenic |
| TTCAGGGAGAAAGCTGAGCT+TGG | 0.509469 | 5.1:+25169560 | MS.gene44379:intron |
| AATAGCTGACCTTAGGGCTC+TGG | 0.511436 | 5.1:-25170450 | None:intergenic |
| ACTTGTTTCTAATTTAACCT+TGG | 0.514008 | 5.1:-25173863 | None:intergenic |
| AAGAAAACCCTTGCTTTGAA+AGG | 0.517445 | 5.1:+25174145 | MS.gene44379:CDS |
| AAGCTGTGAATGTATCTCTT+GGG | 0.518223 | 5.1:+25174083 | MS.gene44379:CDS |
| AAATGGATACAGAAGGCAAA+AGG | 0.519820 | 5.1:-25174222 | None:intergenic |
| CGTCAGCTCCTTGATCTTCA+CGG | 0.527964 | 5.1:-25169594 | None:intergenic |
| ACAGTGATTTCATTGAGCAA+TGG | 0.531537 | 5.1:+25173815 | MS.gene44379:intron |
| ATGTGCTCCTTTCAAAGCAA+GGG | 0.535168 | 5.1:-25174152 | None:intergenic |
| CATCGCCGCCGTGAAGATCA+AGG | 0.541374 | 5.1:+25169586 | MS.gene44379:CDS |
| AGACCAAGTATTCGGGAGCA+GGG | 0.545106 | 5.1:+25171514 | MS.gene44379:intron |
| CAAGTATTCGGGAGCAGGGG+CGG | 0.551194 | 5.1:+25171518 | MS.gene44379:CDS |
| GCAGTGCACAAACTGTGAAA+AGG | 0.551365 | 5.1:+25173903 | MS.gene44379:CDS |
| ACTTATCCATTTGTGAGAGA+TGG | 0.556933 | 5.1:+25174115 | MS.gene44379:CDS |
| AATGTGCTCCTTTCAAAGCA+AGG | 0.563009 | 5.1:-25174153 | None:intergenic |
| AATCAGAAGGAAGACATGGC+TGG | 0.564330 | 5.1:+25169268 | None:intergenic |
| CCGGATGAGAGGATCCGATC+CGG | 0.568309 | 5.1:+25169653 | MS.gene44379:CDS |
| AAGTCTGGTCAGAGTTGCGA+TGG | 0.569242 | 5.1:-25169308 | None:intergenic |
| TTGCGGTGGTCCCATCATCT+CGG | 0.571482 | 5.1:-25172922 | None:intergenic |
| TGGAAATCCAAAATGTGAGA+AGG | 0.571528 | 5.1:-25170821 | None:intergenic |
| TCCAAATTTGCAATCCAGCA+AGG | 0.577092 | 5.1:+25173839 | MS.gene44379:CDS |
| CCACAAAGGCTTCACCCGGT+TGG | 0.578743 | 5.1:-25170841 | None:intergenic |
| GGAAATCCAAAATGTGAGAA+GGG | 0.582778 | 5.1:-25170820 | None:intergenic |
| ATTGGACACAGCTGCTGTGG+AGG | 0.590942 | 5.1:+25172878 | MS.gene44379:CDS |
| CGGACCACAAAGGCTTCACC+CGG | 0.592537 | 5.1:-25170845 | None:intergenic |
| TGCCAAAGGCCAGAGCCCTA+AGG | 0.593445 | 5.1:+25170441 | MS.gene44379:CDS |
| TTGCAATCCAGCAAGGTCCA+AGG | 0.594272 | 5.1:+25173846 | MS.gene44379:CDS |
| AGGAAGAATCCTGAGCTGTA+CGG | 0.595793 | 5.1:+25170412 | MS.gene44379:intron |
| TCATGTCTATCCGAGATGAT+GGG | 0.595837 | 5.1:+25172912 | MS.gene44379:CDS |
| GACCAAGTATTCGGGAGCAG+GGG | 0.598369 | 5.1:+25171515 | MS.gene44379:intron |
| AAGTAAACCTTGTCATATGG+TGG | 0.601200 | 5.1:-25170887 | None:intergenic |
| GTTATTGGACACAGCTGCTG+TGG | 0.606630 | 5.1:+25172875 | MS.gene44379:CDS |
| AGCCGTTTAACCCGGATGAG+AGG | 0.610912 | 5.1:+25169642 | MS.gene44379:CDS |
| CATGGTTCCACCATATGACA+AGG | 0.613750 | 5.1:+25170880 | MS.gene44379:CDS |
| CATGGCTGGAGAAACATTCG+AGG | 0.615024 | 5.1:+25169282 | None:intergenic |
| CGGATCGGATCCTCTCATCC+GGG | 0.617375 | 5.1:-25169652 | None:intergenic |
| GTCATATGGTGGAACCATGT+TGG | 0.618619 | 5.1:-25170876 | None:intergenic |
| AGACCTTAAATGGATACAGA+AGG | 0.620858 | 5.1:-25174229 | None:intergenic |
| GAGATGATGGGACCACCGCA+AGG | 0.626911 | 5.1:+25172924 | MS.gene44379:CDS |
| GGTCCGTAACATCGCCAACA+TGG | 0.627271 | 5.1:+25170862 | MS.gene44379:CDS |
| TGAAACTAACAAAACCGGAT+CGG | 0.630831 | 5.1:-25169667 | None:intergenic |
| AGGGGCGGCCATTGAATATG+CGG | 0.637261 | 5.1:+25171533 | MS.gene44379:CDS |
| AAATAAAACCTACCTTGCGG+TGG | 0.643471 | 5.1:-25172936 | None:intergenic |
| CTGTACGGTGAACTTGCCAA+AGG | 0.647222 | 5.1:+25170427 | MS.gene44379:CDS |
| CGTGAAGATCAAGGAGCTGA+CGG | 0.657927 | 5.1:+25169595 | MS.gene44379:CDS |
| ACGGCGGAGTTAGAGGCCAA+CGG | 0.658529 | 5.1:+25169614 | MS.gene44379:CDS |
| GCTGCTGTGGAGGCATAAAG+GGG | 0.658582 | 5.1:+25172888 | MS.gene44379:CDS |
| GGCGATGTTACGGACCACAA+AGG | 0.665172 | 5.1:-25170855 | None:intergenic |
| GAAGATCAAGGAGCTGACGG+CGG | 0.707015 | 5.1:+25169598 | MS.gene44379:CDS |
| CAGCTCCTTGATCTTCACGG+CGG | 0.827966 | 5.1:-25169591 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATTATTATTATTATA+TGG | + | chr5.1:25171858-25171877 | MS.gene44379:intron | 0.0% |
| !! | AAAAAAAATCTTAAATTTGT+TGG | + | chr5.1:25174000-25174019 | MS.gene44379:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5.1:25171737-25171756 | None:intergenic | 10.0% |
| !! | ATAATATAAGATAAAGTATA+TGG | - | chr5.1:25171845-25171864 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5.1:25171738-25171757 | None:intergenic | 10.0% |
| !! | TATTATTATTATTATATGGT+GGG | + | chr5.1:25171862-25171881 | MS.gene44379:intron | 10.0% |
| !! | TCACAATTAAATTATATTAA+TGG | - | chr5.1:25173173-25173192 | None:intergenic | 10.0% |
| !! | TTATTATTATTATTATATGG+TGG | + | chr5.1:25171861-25171880 | MS.gene44379:intron | 10.0% |
| !!! | ATATGATTCTTTTTTTATTA+AGG | + | chr5.1:25173404-25173423 | MS.gene44379:intron | 10.0% |
| !!! | TAAATATATTACACTTTTAT+AGG | - | chr5.1:25170971-25170990 | None:intergenic | 10.0% |
| !!! | TTATTACTATATTATTTTCA+GGG | + | chr5.1:25169544-25169563 | MS.gene44379:intron | 10.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5.1:25171736-25171755 | None:intergenic | 15.0% |
| !! | ATAAAAAAGTAAAATGCTAT+TGG | - | chr5.1:25172811-25172830 | None:intergenic | 15.0% |
| !! | ATAAAATGAATAAGTTAAGT+AGG | - | chr5.1:25173955-25173974 | None:intergenic | 15.0% |
| !! | ATAATATAGTAATAACGAAA+CGG | - | chr5.1:25169539-25169558 | None:intergenic | 15.0% |
| !! | ATAGGTATATTATATATCAA+AGG | - | chr5.1:25170633-25170652 | None:intergenic | 15.0% |
| !! | ATATTTCTTGTAAATAAGAT+CGG | + | chr5.1:25170088-25170107 | MS.gene44379:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5.1:25171672-25171691 | None:intergenic | 15.0% |
| !! | CAATTAAATTATATTAATGG+TGG | - | chr5.1:25173170-25173189 | None:intergenic | 15.0% |
| !! | GATATATTTGGTTAAAAAAT+TGG | - | chr5.1:25170051-25170070 | None:intergenic | 15.0% |
| !! | TAAAATGAATAAGTTAAGTA+GGG | - | chr5.1:25173954-25173973 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5.1:25171673-25171692 | None:intergenic | 15.0% |
| !! | TCAACAAAAATAGATATATT+TGG | - | chr5.1:25170063-25170082 | None:intergenic | 15.0% |
| !! | TTATTTATTATTATGTTCCT+TGG | + | chr5.1:25172953-25172972 | MS.gene44379:intron | 15.0% |
| !!! | AAACTTAAAACTGTTTTATT+AGG | - | chr5.1:25171279-25171298 | None:intergenic | 15.0% |
| !!! | AGTAAAATAACATAACATTT+TGG | + | chr5.1:25172050-25172069 | MS.gene44379:intron | 15.0% |
| !!! | ATTTATATAAACACATTTTC+AGG | - | chr5.1:25172619-25172638 | None:intergenic | 15.0% |
| !!! | GTTATTACTATATTATTTTC+AGG | + | chr5.1:25169543-25169562 | MS.gene44379:intron | 15.0% |
| !!! | TAGTAGATATTTTTCATTAT+AGG | - | chr5.1:25170651-25170670 | None:intergenic | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr5.1:25171713-25171732 | None:intergenic | 20.0% |
| !! | CTAATTTAACCCTTAAAAAA+TGG | - | chr5.1:25172437-25172456 | None:intergenic | 20.0% |
| !! | TATCAAAGATAAAATGATGT+TGG | - | chr5.1:25171246-25171265 | None:intergenic | 20.0% |
| !! | TTAATAAATGTTGATGTATC+TGG | + | chr5.1:25170024-25170043 | MS.gene44379:intron | 20.0% |
| !! | TTGAATTTATTGAATTCACA+TGG | + | chr5.1:25171072-25171091 | MS.gene44379:intron | 20.0% |
| !!! | AATTTGAGTTATCATCTTTT+AGG | - | chr5.1:25173013-25173032 | None:intergenic | 20.0% |
| !!! | ACATAAAAATTTGCTTAACT+TGG | + | chr5.1:25170335-25170354 | MS.gene44379:intron | 20.0% |
| !!! | CAACTGTTAATTTTAATTCA+AGG | - | chr5.1:25169830-25169849 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5.1:25171603-25171622 | None:intergenic | 20.0% |
| !!! | GCATTTTACTTTTTTATGTT+TGG | + | chr5.1:25172814-25172833 | MS.gene44379:intron | 20.0% |
| !!! | GTATCTTTTATAGGTTTTTA+TGG | + | chr5.1:25172205-25172224 | MS.gene44379:intron | 20.0% |
| !!! | TCAAAGTTATATCTTCATTT+TGG | + | chr5.1:25171432-25171451 | MS.gene44379:intron | 20.0% |
| !!! | TCAATATGTGTATCTTTTAT+AGG | + | chr5.1:25172196-25172215 | MS.gene44379:intron | 20.0% |
| !!! | TTCTAAAAATTATGTCATAC+AGG | + | chr5.1:25172838-25172857 | MS.gene44379:intron | 20.0% |
| !!! | TTGCTTCTTTGTATATATTT+TGG | + | chr5.1:25171216-25171235 | MS.gene44379:intron | 20.0% |
| !!! | TTTACAAGACCATTTTTTAA+GGG | + | chr5.1:25172425-25172444 | MS.gene44379:intron | 20.0% |
| ! | AAATTCTCAAGGTTGTAAAT+GGG | - | chr5.1:25172729-25172748 | None:intergenic | 25.0% |
| ! | AATAAATAAAACCTACCTTG+CGG | - | chr5.1:25172942-25172961 | None:intergenic | 25.0% |
| ! | ATTCTATTGCATCATTTGTT+GGG | + | chr5.1:25171937-25171956 | MS.gene44379:intron | 25.0% |
| ! | ATTTCAACTATGAGATGAAA+GGG | - | chr5.1:25173122-25173141 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5.1:25171714-25171733 | None:intergenic | 25.0% |
| ! | GTCGATCATTATAAAATGAA+CGG | - | chr5.1:25172656-25172675 | None:intergenic | 25.0% |
| ! | GTCTACTTCTTAAGTTTATA+TGG | + | chr5.1:25172291-25172310 | MS.gene44379:intron | 25.0% |
| ! | GTTGAGAATATTGTAGTTAT+TGG | + | chr5.1:25172860-25172879 | MS.gene44379:CDS | 25.0% |
| ! | TACTTGTCTTATGTTTGATT+CGG | + | chr5.1:25172360-25172379 | MS.gene44379:intron | 25.0% |
| ! | TAGTGAATGTGTTAGAATTA+CGG | - | chr5.1:25173690-25173709 | None:intergenic | 25.0% |
| ! | TATTCTATTGCATCATTTGT+TGG | + | chr5.1:25171936-25171955 | MS.gene44379:intron | 25.0% |
| ! | TCAATTTCTTCAAATTCTCA+AGG | - | chr5.1:25172740-25172759 | None:intergenic | 25.0% |
| ! | TCATAAGTAACTATTCCAAT+TGG | + | chr5.1:25169796-25169815 | MS.gene44379:intron | 25.0% |
| ! | TCATATCTTATCGTGTATTA+CGG | + | chr5.1:25171980-25171999 | MS.gene44379:intron | 25.0% |
| ! | TCTTTATAAGAGATATTCCA+AGG | - | chr5.1:25172973-25172992 | None:intergenic | 25.0% |
| ! | TGGAATATCTCTTATAAAGA+AGG | + | chr5.1:25172973-25172992 | MS.gene44379:intron | 25.0% |
| ! | TGTATTCATGAATTAGTAGT+AGG | - | chr5.1:25169854-25169873 | None:intergenic | 25.0% |
| ! | TTAGACCTTAAATTATACCA+TGG | + | chr5.1:25172453-25172472 | MS.gene44379:intron | 25.0% |
| ! | TTCACTATGATACAAAACTT+AGG | + | chr5.1:25173703-25173722 | MS.gene44379:intron | 25.0% |
| !! | AGTATAAAGTCGTTCTTTTA+TGG | + | chr5.1:25170721-25170740 | MS.gene44379:intron | 25.0% |
| !! | ATTTTATGATCAATGCATCT+GGG | + | chr5.1:25170606-25170625 | MS.gene44379:intron | 25.0% |
| !! | CTACTAATAAACTCATTTTC+AGG | - | chr5.1:25172391-25172410 | None:intergenic | 25.0% |
| !! | GCACATTACAATTTTGTTAA+TGG | + | chr5.1:25174169-25174188 | MS.gene44379:CDS | 25.0% |
| !! | GGATCATGTTTTACTTTATT+TGG | + | chr5.1:25169741-25169760 | MS.gene44379:intron | 25.0% |
| !! | TAGTTTTTGCAGAATCATAT+TGG | + | chr5.1:25173660-25173679 | MS.gene44379:intron | 25.0% |
| !! | TATTTTATGATCAATGCATC+TGG | + | chr5.1:25170605-25170624 | MS.gene44379:intron | 25.0% |
| !! | TTCAAGGAATTTTATCCAAT+TGG | - | chr5.1:25169814-25169833 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5.1:25171626-25171645 | None:intergenic | 25.0% |
| !! | TTTATTTGGTTTCGTACTTA+CGG | + | chr5.1:25169755-25169774 | MS.gene44379:intron | 25.0% |
| !! | TTTTTCTTAATGCAATAAGG+TGG | - | chr5.1:25170923-25170942 | None:intergenic | 25.0% |
| !!! | ACTTGTTTCTAATTTAACCT+TGG | - | chr5.1:25173866-25173885 | None:intergenic | 25.0% |
| !!! | CTTTACAAGACCATTTTTTA+AGG | + | chr5.1:25172424-25172443 | MS.gene44379:intron | 25.0% |
| !!! | GACTTTTTCTTAATGCAATA+AGG | - | chr5.1:25170926-25170945 | None:intergenic | 25.0% |
| !!! | GAGTCATTTTTCTTATGTTA+CGG | - | chr5.1:25173738-25173757 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5.1:25171604-25171623 | None:intergenic | 25.0% |
| !!! | TATTCCTTTTGATTAACCAA+CGG | - | chr5.1:25173227-25173246 | None:intergenic | 25.0% |
| !!! | TCAATTTTCATTTGATAACG+CGG | + | chr5.1:25169447-25169466 | MS.gene44379:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5.1:25171625-25171644 | None:intergenic | 25.0% |
| !!! | TGTTATTGTTACTTTCATGT+GGG | + | chr5.1:25169483-25169502 | MS.gene44379:intron | 25.0% |
| AAATGACTCACAATTCTTCT+TGG | + | chr5.1:25173749-25173768 | MS.gene44379:intron | 30.0% | |
| AATCAAAAGGAATAACCTCT+TGG | + | chr5.1:25173233-25173252 | MS.gene44379:intron | 30.0% | |
| AGTCTTGAAACTAACAAAAC+CGG | - | chr5.1:25169675-25169694 | None:intergenic | 30.0% | |
| ATACAAAGAAGCAATGATGT+TGG | - | chr5.1:25171210-25171229 | None:intergenic | 30.0% | |
| ATATGCGGTCTTACATTTAA+AGG | + | chr5.1:25171548-25171567 | MS.gene44379:CDS | 30.0% | |
| CAAATTCTCAAGGTTGTAAA+TGG | - | chr5.1:25172730-25172749 | None:intergenic | 30.0% | |
| CAATAACTAGTTAGTAAGTG+AGG | - | chr5.1:25173453-25173472 | None:intergenic | 30.0% | |
| CACAACATTTAATGTAGTGT+CGG | + | chr5.1:25172142-25172161 | MS.gene44379:intron | 30.0% | |
| CATATCTTATCGTGTATTAC+GGG | + | chr5.1:25171981-25172000 | MS.gene44379:intron | 30.0% | |
| CATTTCAACTATGAGATGAA+AGG | - | chr5.1:25173123-25173142 | None:intergenic | 30.0% | |
| CTCACTTACTAACTAGTTAT+TGG | + | chr5.1:25173451-25173470 | MS.gene44379:intron | 30.0% | |
| GAAAAGTAAACCTTGTCATA+TGG | - | chr5.1:25170893-25170912 | None:intergenic | 30.0% | |
| GAATACTTAACAATGTCAGA+TGG | - | chr5.1:25171921-25171940 | None:intergenic | 30.0% | |
| GCTATTCTATTACTAGTACT+TGG | + | chr5.1:25170467-25170486 | MS.gene44379:intron | 30.0% | |
| GTAATTAGTGTAAACGGAAA+TGG | - | chr5.1:25170494-25170513 | None:intergenic | 30.0% | |
| TAAGTTAAGTAGGGTTTGAT+TGG | - | chr5.1:25173945-25173964 | None:intergenic | 30.0% | |
| TAATAGAATAGCTGACCTTA+GGG | - | chr5.1:25170459-25170478 | None:intergenic | 30.0% | |
| TCTTATCATTGATCATGCTT+AGG | - | chr5.1:25172564-25172583 | None:intergenic | 30.0% | |
| TGGTACCATGGTATAATTTA+AGG | - | chr5.1:25172461-25172480 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5.1:25171729-25171748 | None:intergenic | 30.0% | |
| TTGAATTCACATGGTGTAAA+AGG | + | chr5.1:25171081-25171100 | MS.gene44379:intron | 30.0% | |
| TTTGGTTATTGAAATCGTAG+TGG | + | chr5.1:25172068-25172087 | MS.gene44379:intron | 30.0% | |
| ! | ACCTCTTGGAAAATTTTCTA+TGG | + | chr5.1:25173247-25173266 | MS.gene44379:intron | 30.0% |
| ! | AGTACATTTTACTGAGATGT+TGG | + | chr5.1:25170366-25170385 | MS.gene44379:intron | 30.0% |
| ! | CCTCTTGGAAAATTTTCTAT+GGG | + | chr5.1:25173248-25173267 | MS.gene44379:intron | 30.0% |
| ! | GTGTCTTAATGAACTTTTGA+CGG | - | chr5.1:25172488-25172507 | None:intergenic | 30.0% |
| ! | TTACATTACACGGTTTGTTT+GGG | - | chr5.1:25169510-25169529 | None:intergenic | 30.0% |
| ! | TTTTTCTTACTTGAGAAGTC+TGG | - | chr5.1:25169326-25169345 | None:intergenic | 30.0% |
| !! | CTGTTATTGTTACTTTCATG+TGG | + | chr5.1:25169482-25169501 | MS.gene44379:intron | 30.0% |
| !!! | AATGAACTTTTGACGGATTT+TGG | - | chr5.1:25172481-25172500 | None:intergenic | 30.0% |
| AAAATTTCCCCCTCAACTTA+CGG | - | chr5.1:25170306-25170325 | None:intergenic | 35.0% | |
| AAATGGATACAGAAGGCAAA+AGG | - | chr5.1:25174225-25174244 | None:intergenic | 35.0% | |
| AAATTGACGCTAAAAGACAG+CGG | - | chr5.1:25169434-25169453 | None:intergenic | 35.0% | |
| AAGCTGTGAATGTATCTCTT+GGG | + | chr5.1:25174083-25174102 | MS.gene44379:CDS | 35.0% | |
| AAGTAAACCTTGTCATATGG+TGG | - | chr5.1:25170890-25170909 | None:intergenic | 35.0% | |
| ACAGTGATTTCATTGAGCAA+TGG | + | chr5.1:25173815-25173834 | MS.gene44379:intron | 35.0% | |
| ACGGAAAACGTTACATTACA+CGG | - | chr5.1:25169520-25169539 | None:intergenic | 35.0% | |
| ACTTATCCATTTGTGAGAGA+TGG | + | chr5.1:25174115-25174134 | MS.gene44379:CDS | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr5.1:25171590-25171609 | None:intergenic | 35.0% | |
| AGTATATGGTGAAGAAAGAG+AGG | - | chr5.1:25171831-25171850 | None:intergenic | 35.0% | |
| AGTTAGTAAGTGAGGATTTG+AGG | - | chr5.1:25173445-25173464 | None:intergenic | 35.0% | |
| ATAACATGATCTATCACCGT+TGG | + | chr5.1:25173208-25173227 | MS.gene44379:intron | 35.0% | |
| ATGTAAGACCGCATATTCAA+TGG | - | chr5.1:25171544-25171563 | None:intergenic | 35.0% | |
| CAGTGATTTCATTGAGCAAT+GGG | + | chr5.1:25173816-25173835 | MS.gene44379:intron | 35.0% | |
| CGACACTACATTAAATGTTG+TGG | - | chr5.1:25172144-25172163 | None:intergenic | 35.0% | |
| CTGAATTGAAACACCAAAAC+AGG | - | chr5.1:25171462-25171481 | None:intergenic | 35.0% | |
| GAACGCGTAATTAGTGTAAA+CGG | - | chr5.1:25170500-25170519 | None:intergenic | 35.0% | |
| GGAAATCCAAAATGTGAGAA+GGG | - | chr5.1:25170823-25170842 | None:intergenic | 35.0% | |
| GTAATAGAATAGCTGACCTT+AGG | - | chr5.1:25170460-25170479 | None:intergenic | 35.0% | |
| TATAGTGCACATGCAGTTTA+TGG | + | chr5.1:25170769-25170788 | MS.gene44379:intron | 35.0% | |
| TATGAAAATTGAGATGCCTG+TGG | - | chr5.1:25171965-25171984 | None:intergenic | 35.0% | |
| TCTCACTAACAGCATTATAG+TGG | + | chr5.1:25170568-25170587 | MS.gene44379:intron | 35.0% | |
| TGAAACTAACAAAACCGGAT+CGG | - | chr5.1:25169670-25169689 | None:intergenic | 35.0% | |
| TGAAGTGACTTCAAACATGT+AGG | - | chr5.1:25171115-25171134 | None:intergenic | 35.0% | |
| TGGAAATCCAAAATGTGAGA+AGG | - | chr5.1:25170824-25170843 | None:intergenic | 35.0% | |
| TTGCTTCCTAATTCAAATGC+AGG | + | chr5.1:25174060-25174079 | MS.gene44379:intron | 35.0% | |
| ! | AAGAAAACCCTTGCTTTGAA+AGG | + | chr5.1:25174145-25174164 | MS.gene44379:CDS | 35.0% |
| ! | ACATTTTACTGAGATGTTGG+TGG | + | chr5.1:25170369-25170388 | MS.gene44379:intron | 35.0% |
| ! | ATCACCGTTGGTTAATCAAA+AGG | + | chr5.1:25173220-25173239 | MS.gene44379:intron | 35.0% |
| ! | CATTTTACTGAGATGTTGGT+GGG | + | chr5.1:25170370-25170389 | MS.gene44379:intron | 35.0% |
| ! | CCCATAGAAAATTTTCCAAG+AGG | - | chr5.1:25173251-25173270 | None:intergenic | 35.0% |
| ! | CGCTGTCGTTTAACATTAAA+AGG | - | chr5.1:25173342-25173361 | None:intergenic | 35.0% |
| ! | GTTACATTACACGGTTTGTT+TGG | - | chr5.1:25169511-25169530 | None:intergenic | 35.0% |
| ! | TCACATTTTGGATTTCCAAC+CGG | + | chr5.1:25170826-25170845 | MS.gene44379:CDS | 35.0% |
| ! | TGATTTTACTGTGCGTGTTT+AGG | + | chr5.1:25169715-25169734 | MS.gene44379:intron | 35.0% |
| !! | TTATTATATGGTGGGTCTCT+TGG | + | chr5.1:25171870-25171889 | MS.gene44379:intron | 35.0% |
| !!! | ATTTTCATTTGATAACGCGG+AGG | + | chr5.1:25169450-25169469 | MS.gene44379:intron | 35.0% |
| AAATAAAACCTACCTTGCGG+TGG | - | chr5.1:25172939-25172958 | None:intergenic | 40.0% | |
| AATCTGTGTGAAATGAGCCA+AGG | + | chr5.1:25171757-25171776 | MS.gene44379:intron | 40.0% | |
| AATGTGCTCCTTTCAAAGCA+AGG | - | chr5.1:25174156-25174175 | None:intergenic | 40.0% | |
| AATTTAACCTTGGACCTTGC+TGG | - | chr5.1:25173856-25173875 | None:intergenic | 40.0% | |
| ACAACACCATCTCTCACAAA+TGG | - | chr5.1:25174124-25174143 | None:intergenic | 40.0% | |
| ACCTTGCTGGATTGCAAATT+TGG | - | chr5.1:25173843-25173862 | None:intergenic | 40.0% | |
| AGCCAAGGGGTCAAATAAAT+TGG | + | chr5.1:25171772-25171791 | MS.gene44379:intron | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | + | chr5.1:25171777-25171796 | MS.gene44379:intron | 40.0% | |
| AGTGACTTCAAACATGTAGG+TGG | - | chr5.1:25171112-25171131 | None:intergenic | 40.0% | |
| ATATGGTGAAGAAAGAGAGG+TGG | - | chr5.1:25171828-25171847 | None:intergenic | 40.0% | |
| ATCTGTGTGAAATGAGCCAA+GGG | + | chr5.1:25171758-25171777 | MS.gene44379:intron | 40.0% | |
| ATGTGCTCCTTTCAAAGCAA+GGG | - | chr5.1:25174155-25174174 | None:intergenic | 40.0% | |
| ATTCAGACACAAAGTCTGAC+TGG | + | chr5.1:25171476-25171495 | MS.gene44379:intron | 40.0% | |
| CAGCTTCCTGCATTTGAATT+AGG | - | chr5.1:25174069-25174088 | None:intergenic | 40.0% | |
| CTGTGAATCAGCAACATACT+TGG | - | chr5.1:25173095-25173114 | None:intergenic | 40.0% | |
| CTTGGTCTGCCAAAACAAAA+AGG | - | chr5.1:25171502-25171521 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr5.1:25171589-25171608 | None:intergenic | 40.0% | |
| GAAGCTGTGAATGTATCTCT+TGG | + | chr5.1:25174082-25174101 | MS.gene44379:CDS | 40.0% | |
| GCCAAGGGGTCAAATAAATT+GGG | + | chr5.1:25171773-25171792 | MS.gene44379:intron | 40.0% | |
| GGTTTCGTACTTACGGAATT+AGG | + | chr5.1:25169762-25169781 | MS.gene44379:intron | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | + | chr5.1:25171781-25171800 | MS.gene44379:intron | 40.0% | |
| GTGACTTCAAACATGTAGGT+GGG | - | chr5.1:25171111-25171130 | None:intergenic | 40.0% | |
| TCAGGATTCTTCCTGAAAAG+AGG | - | chr5.1:25170406-25170425 | None:intergenic | 40.0% | |
| TCATGTCTATCCGAGATGAT+GGG | + | chr5.1:25172912-25172931 | MS.gene44379:CDS | 40.0% | |
| TCCAAATTTGCAATCCAGCA+AGG | + | chr5.1:25173839-25173858 | MS.gene44379:CDS | 40.0% | |
| TCCCAATTTATTTGACCCCT+TGG | - | chr5.1:25171777-25171796 | None:intergenic | 40.0% | |
| TCTTCATCCTTGCAATTTCG+CGG | + | chr5.1:25172322-25172341 | MS.gene44379:intron | 40.0% | |
| TGACTTCAAACATGTAGGTG+GGG | - | chr5.1:25171110-25171129 | None:intergenic | 40.0% | |
| ! | AGTATGCCCTTCTCACATTT+TGG | + | chr5.1:25170814-25170833 | MS.gene44379:CDS | 40.0% |
| ! | CACATTTTGGATTTCCAACC+GGG | + | chr5.1:25170827-25170846 | MS.gene44379:CDS | 40.0% |
| ! | TAATGGCACTTTTGAGCTGT+GGG | + | chr5.1:25174186-25174205 | MS.gene44379:CDS | 40.0% |
| ! | TCATTTTGGACTGCCTGTTT+TGG | + | chr5.1:25171446-25171465 | MS.gene44379:intron | 40.0% |
| ! | TCTCTCTCTCTCTCGATTTT+CGG | + | chr5.1:25169381-25169400 | MS.gene44379:intron | 40.0% |
| ! | TTAATGGCACTTTTGAGCTG+TGG | + | chr5.1:25174185-25174204 | MS.gene44379:CDS | 40.0% |
| ! | TTACTGTGCGTGTTTAGGAT+CGG | + | chr5.1:25169720-25169739 | MS.gene44379:intron | 40.0% |
| ! | TTTTAGTCCGCGAAATTGCA+AGG | - | chr5.1:25172332-25172351 | None:intergenic | 40.0% |
| ! | TTTTGGCAGACCAAGTATTC+GGG | + | chr5.1:25171507-25171526 | MS.gene44379:intron | 40.0% |
| !! | GTTTTGGCAGACCAAGTATT+CGG | + | chr5.1:25171506-25171525 | MS.gene44379:intron | 40.0% |
| !!! | TCTGACTGGCCTTTTTGTTT+TGG | + | chr5.1:25171490-25171509 | MS.gene44379:intron | 40.0% |
| !!! | TTTGACGGATTTTGGTACCA+TGG | - | chr5.1:25172473-25172492 | None:intergenic | 40.0% |
| AGGAAGAATCCTGAGCTGTA+CGG | + | chr5.1:25170412-25170431 | MS.gene44379:intron | 45.0% | |
| ATCCTCTCATCCGGGTTAAA+CGG | - | chr5.1:25169647-25169666 | None:intergenic | 45.0% | |
| CATGGTTCCACCATATGACA+AGG | + | chr5.1:25170880-25170899 | MS.gene44379:CDS | 45.0% | |
| CCTCAACTTACGGCATAGTT+GGG | - | chr5.1:25170296-25170315 | None:intergenic | 45.0% | |
| CTCATGTCTATCCGAGATGA+TGG | + | chr5.1:25172911-25172930 | MS.gene44379:CDS | 45.0% | |
| CTCTTGGAACAGTGGAAGTT+TGG | + | chr5.1:25171886-25171905 | MS.gene44379:intron | 45.0% | |
| GAACAGTGGAAGTTTGGTAG+AGG | + | chr5.1:25171892-25171911 | MS.gene44379:intron | 45.0% | |
| GAACCATGTTGGCGATGTTA+CGG | - | chr5.1:25170868-25170887 | None:intergenic | 45.0% | |
| GCAGTGCACAAACTGTGAAA+AGG | + | chr5.1:25173903-25173922 | MS.gene44379:CDS | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | + | chr5.1:25171780-25171799 | MS.gene44379:intron | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+GGG | + | chr5.1:25171759-25171778 | MS.gene44379:intron | 45.0% | |
| ! | AACTATGCCGTAAGTTGAGG+GGG | + | chr5.1:25170296-25170315 | MS.gene44379:intron | 45.0% |
| ! | CAACTATGCCGTAAGTTGAG+GGG | + | chr5.1:25170295-25170314 | MS.gene44379:intron | 45.0% |
| ! | CATCATTTGTTGGGATCCAC+AGG | + | chr5.1:25171946-25171965 | MS.gene44379:intron | 45.0% |
| ! | CCAACTATGCCGTAAGTTGA+GGG | + | chr5.1:25170294-25170313 | MS.gene44379:intron | 45.0% |
| ! | GTCATATGGTGGAACCATGT+TGG | - | chr5.1:25170879-25170898 | None:intergenic | 45.0% |
| !! | GTTAAACGGCTTTGAACCGT+TGG | - | chr5.1:25169633-25169652 | None:intergenic | 45.0% |
| !! | TTCATTTGATAACGCGGAGG+TGG | + | chr5.1:25169453-25169472 | MS.gene44379:intron | 45.0% |
| !! | ATAAAAAATTAAAACTAATT+AGG | - | chr5.1:25170531-25170550 | None:intergenic | 5.0% |
| AAGTCTGGTCAGAGTTGCGA+TGG | - | chr5.1:25169311-25169330 | None:intergenic | 50.0% | |
| AATAGCTGACCTTAGGGCTC+TGG | - | chr5.1:25170453-25170472 | None:intergenic | 50.0% | |
| AGACCAAGTATTCGGGAGCA+GGG | + | chr5.1:25171514-25171533 | MS.gene44379:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr5.1:25171585-25171604 | None:intergenic | 50.0% | |
| CCCAACTATGCCGTAAGTTG+AGG | + | chr5.1:25170293-25170312 | MS.gene44379:intron | 50.0% | |
| CCCTCAACTTACGGCATAGT+TGG | - | chr5.1:25170297-25170316 | None:intergenic | 50.0% | |
| CGACAGCGTATCATCACTCA+CGG | + | chr5.1:25173354-25173373 | MS.gene44379:intron | 50.0% | |
| CGGTTCAAAGCCGTTTAACC+CGG | + | chr5.1:25169634-25169653 | MS.gene44379:CDS | 50.0% | |
| CGTATCATCACTCACGGGAA+AGG | + | chr5.1:25173360-25173379 | MS.gene44379:intron | 50.0% | |
| CGTCAGCTCCTTGATCTTCA+CGG | - | chr5.1:25169597-25169616 | None:intergenic | 50.0% | |
| CGTGAAGATCAAGGAGCTGA+CGG | + | chr5.1:25169595-25169614 | MS.gene44379:CDS | 50.0% | |
| CTGTACGGTGAACTTGCCAA+AGG | + | chr5.1:25170427-25170446 | MS.gene44379:CDS | 50.0% | |
| GACAGCGTATCATCACTCAC+GGG | + | chr5.1:25173355-25173374 | MS.gene44379:intron | 50.0% | |
| GTTATTGGACACAGCTGCTG+TGG | + | chr5.1:25172875-25172894 | MS.gene44379:CDS | 50.0% | |
| TGGTGAAGAAAGAGAGGTGG+TGG | - | chr5.1:25171825-25171844 | None:intergenic | 50.0% | |
| TTCAGGGAGAAAGCTGAGCT+TGG | + | chr5.1:25169560-25169579 | MS.gene44379:intron | 50.0% | |
| TTGCAATCCAGCAAGGTCCA+AGG | + | chr5.1:25173846-25173865 | MS.gene44379:CDS | 50.0% | |
| ! | AGCTGCTGTGGAGGCATAAA+GGG | + | chr5.1:25172887-25172906 | MS.gene44379:CDS | 50.0% |
| ! | GTGCTGTACGTCCTCTTTTC+AGG | + | chr5.1:25170392-25170411 | MS.gene44379:intron | 50.0% |
| !! | ATTTGATAACGCGGAGGTGG+TGG | + | chr5.1:25169456-25169475 | MS.gene44379:intron | 50.0% |
| AGCCGTTTAACCCGGATGAG+AGG | + | chr5.1:25169642-25169661 | MS.gene44379:CDS | 55.0% | |
| AGGGGCGGCCATTGAATATG+CGG | + | chr5.1:25171533-25171552 | MS.gene44379:CDS | 55.0% | |
| ATTGGACACAGCTGCTGTGG+AGG | + | chr5.1:25172878-25172897 | MS.gene44379:CDS | 55.0% | |
| CAGACCAAGTATTCGGGAGC+AGG | + | chr5.1:25171513-25171532 | MS.gene44379:intron | 55.0% | |
| CAGCTCCTTGATCTTCACGG+CGG | - | chr5.1:25169594-25169613 | None:intergenic | 55.0% | |
| CATCACTCACGGGAAAGGAG+AGG | + | chr5.1:25173365-25173384 | MS.gene44379:intron | 55.0% | |
| GAAGATCAAGGAGCTGACGG+CGG | + | chr5.1:25169598-25169617 | MS.gene44379:CDS | 55.0% | |
| GACCAAGTATTCGGGAGCAG+GGG | + | chr5.1:25171515-25171534 | MS.gene44379:intron | 55.0% | |
| GCAAGTTCACCGTACAGCTC+AGG | - | chr5.1:25170424-25170443 | None:intergenic | 55.0% | |
| GGCGATGTTACGGACCACAA+AGG | - | chr5.1:25170858-25170877 | None:intergenic | 55.0% | |
| GGTCCGTAACATCGCCAACA+TGG | + | chr5.1:25170862-25170881 | MS.gene44379:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5.1:25171581-25171600 | None:intergenic | 55.0% | |
| TTGCGGTGGTCCCATCATCT+CGG | - | chr5.1:25172925-25172944 | None:intergenic | 55.0% | |
| ! | CAGCTGCTGTGGAGGCATAA+AGG | + | chr5.1:25172886-25172905 | MS.gene44379:CDS | 55.0% |
| ! | GCTGCTGTGGAGGCATAAAG+GGG | + | chr5.1:25172888-25172907 | MS.gene44379:CDS | 55.0% |
| ! | TGGTGGGTCTCTTGGAACAG+TGG | + | chr5.1:25171878-25171897 | MS.gene44379:intron | 55.0% |
| ACGGCGGAGTTAGAGGCCAA+CGG | + | chr5.1:25169614-25169633 | MS.gene44379:CDS | 60.0% | |
| AGGTAGTACTCCCTCCGTCC+CGG | + | chr5.1:25171568-25171587 | MS.gene44379:intron | 60.0% | |
| CAAGTATTCGGGAGCAGGGG+CGG | + | chr5.1:25171518-25171537 | MS.gene44379:CDS | 60.0% | |
| CATCGCCGCCGTGAAGATCA+AGG | + | chr5.1:25169586-25169605 | MS.gene44379:CDS | 60.0% | |
| CCAACCGGGTGAAGCCTTTG+TGG | + | chr5.1:25170841-25170860 | MS.gene44379:CDS | 60.0% | |
| CCACAAAGGCTTCACCCGGT+TGG | - | chr5.1:25170844-25170863 | None:intergenic | 60.0% | |
| CCGGATCGGATCCTCTCATC+CGG | - | chr5.1:25169656-25169675 | None:intergenic | 60.0% | |
| CCGGATGAGAGGATCCGATC+CGG | + | chr5.1:25169653-25169672 | MS.gene44379:CDS | 60.0% | |
| CGGACCACAAAGGCTTCACC+CGG | - | chr5.1:25170848-25170867 | None:intergenic | 60.0% | |
| CGGATCGGATCCTCTCATCC+GGG | - | chr5.1:25169655-25169674 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5.1:25171582-25171601 | None:intergenic | 60.0% | |
| TGATGGGACCACCGCAAGGT+AGG | + | chr5.1:25172928-25172947 | MS.gene44379:intron | 60.0% | |
| TGCCAAAGGCCAGAGCCCTA+AGG | + | chr5.1:25170441-25170460 | MS.gene44379:CDS | 60.0% | |
| ! | GACCTTAGGGCTCTGGCCTT+TGG | - | chr5.1:25170446-25170465 | None:intergenic | 60.0% |
| !! | GAGATGATGGGACCACCGCA+AGG | + | chr5.1:25172924-25172943 | MS.gene44379:CDS | 60.0% |
| CGCCCCTGCTCCCGAATACT+TGG | - | chr5.1:25171520-25171539 | None:intergenic | 65.0% | |
| GGAGCTGACGGCGGAGTTAG+AGG | + | chr5.1:25169607-25169626 | MS.gene44379:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 25169283 | 25174246 | 25169283 | ID=MS.gene44379 |
| chr5.1 | mRNA | 25169283 | 25174246 | 25169283 | ID=MS.gene44379.t1;Parent=MS.gene44379 |
| chr5.1 | exon | 25169283 | 25169335 | 25169283 | ID=MS.gene44379.t1.exon1;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25169283 | 25169335 | 25169283 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| chr5.1 | exon | 25169565 | 25169705 | 25169565 | ID=MS.gene44379.t1.exon2;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25169565 | 25169705 | 25169565 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| chr5.1 | exon | 25170414 | 25170462 | 25170414 | ID=MS.gene44379.t1.exon3;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25170414 | 25170462 | 25170414 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| chr5.1 | exon | 25170785 | 25170901 | 25170785 | ID=MS.gene44379.t1.exon4;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25170785 | 25170901 | 25170785 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| chr5.1 | exon | 25171516 | 25171569 | 25171516 | ID=MS.gene44379.t1.exon5;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25171516 | 25171569 | 25171516 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| chr5.1 | exon | 25172860 | 25172945 | 25172860 | ID=MS.gene44379.t1.exon6;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25172860 | 25172945 | 25172860 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| chr5.1 | exon | 25173819 | 25173924 | 25173819 | ID=MS.gene44379.t1.exon7;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25173819 | 25173924 | 25173819 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| chr5.1 | exon | 25174082 | 25174246 | 25174082 | ID=MS.gene44379.t1.exon8;Parent=MS.gene44379.t1 |
| chr5.1 | CDS | 25174082 | 25174246 | 25174082 | ID=cds.MS.gene44379.t1;Parent=MS.gene44379.t1 |
| Gene Sequence |
| Protein sequence |
