Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44895.t1 | AES98591.2 | 93.5 | 558 | 34 | 1 | 1 | 556 | 1 | 558 | 3.40E-288 | 1000.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44895.t1 | Q84KJ3 | 69.9 | 429 | 128 | 1 | 64 | 491 | 88 | 516 | 9.0e-189 | 661.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44895.t1 | G7KE47 | 93.5 | 558 | 34 | 1 | 1 | 556 | 1 | 558 | 2.5e-288 | 1000.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44895 | MS.gene030901 | PPI |
| MS.gene44895 | MS.gene27972 | PPI |
| MS.gene53501 | MS.gene44895 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44895.t1 | MTR_5g070310 | 93.907 | 558 | 32 | 1 | 1 | 556 | 1 | 558 | 0.0 | 1014 |
| MS.gene44895.t1 | MTR_4g116900 | 25.246 | 305 | 193 | 13 | 164 | 464 | 161 | 434 | 2.82e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44895.t1 | AT5G58760 | 70.980 | 510 | 137 | 4 | 5 | 508 | 6 | 510 | 0.0 | 746 |
| MS.gene44895.t1 | AT5G58760 | 74.515 | 412 | 105 | 0 | 97 | 508 | 1 | 412 | 0.0 | 669 |
| MS.gene44895.t1 | AT1G80710 | 25.000 | 344 | 206 | 14 | 164 | 491 | 209 | 516 | 1.13e-16 | 83.6 |
Find 130 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCAGTCTGCTTGGATTT+TGG | 0.092885 | 5.2:-59419251 | None:intergenic |
| CGTATATGGGATTCTATCTT+TGG | 0.201004 | 5.2:+59418084 | MS.gene44895:CDS |
| GGATTCTATCTTTGGTAATA+TGG | 0.203494 | 5.2:+59418092 | MS.gene44895:CDS |
| AGGACAATCGTCTTCGTATA+TGG | 0.237095 | 5.2:+59418070 | MS.gene44895:CDS |
| AACACCTGGAAAATGCTTTA+TGG | 0.242204 | 5.2:+59417320 | MS.gene44895:CDS |
| CAAAGAAAACAAGGTTTCAT+AGG | 0.255454 | 5.2:-59414839 | None:intergenic |
| CATGCCATCCATCAGGATTC+AGG | 0.269004 | 5.2:-59417139 | None:intergenic |
| AACCATTAGTTGTACTGATT+TGG | 0.271261 | 5.2:+59417088 | MS.gene44895:CDS |
| CAGCTTTGAAGGGTGTTAAA+TGG | 0.287007 | 5.2:-59418158 | None:intergenic |
| CACATACTCCAAAGGTTTAG+AGG | 0.287821 | 5.2:-59416060 | None:intergenic |
| AAATGAAAAGATTGAGAAAC+TGG | 0.311392 | 5.2:+59414590 | MS.gene44895:CDS |
| TCCTGGCAACTGGGAGTTCT+AGG | 0.318166 | 5.2:+59418463 | MS.gene44895:CDS |
| CTATATTGTAGGCGCGCATT+TGG | 0.318325 | 5.2:+59417935 | MS.gene44895:intron |
| GCATATTTCTCTCCAATAAC+TGG | 0.326448 | 5.2:+59418024 | MS.gene44895:CDS |
| TCTCTTTCAATGAGAACTTT+GGG | 0.330765 | 5.2:-59414483 | None:intergenic |
| TTGGTCTGGAATCACACATT+TGG | 0.346565 | 5.2:-59416626 | None:intergenic |
| TGGATCCCATTCAGCTTTGA+AGG | 0.350384 | 5.2:-59418169 | None:intergenic |
| CATGACTATGCACAATTTCT+CGG | 0.350606 | 5.2:-59418125 | None:intergenic |
| TTAGAGTCACTTGCTGTTGT+TGG | 0.357110 | 5.2:+59418294 | MS.gene44895:CDS |
| AGAAAGGACAACTTGGAGTC+TGG | 0.357633 | 5.2:+59416838 | MS.gene44895:intron |
| GGACTGATGGTTGTGATGTT+CGG | 0.374930 | 5.2:-59418411 | None:intergenic |
| TTTCTGAGAGTTAGCGTAAT+GGG | 0.378118 | 5.2:-59414648 | None:intergenic |
| GTCTCTTTCAATGAGAACTT+TGG | 0.378205 | 5.2:-59414484 | None:intergenic |
| GTGAAGAAAACCAAAGTTAT+CGG | 0.387021 | 5.2:-59417381 | None:intergenic |
| CGTGATGATATCCTGGCAAC+TGG | 0.388271 | 5.2:+59418453 | MS.gene44895:CDS |
| TGGTCTGGAATCACACATTT+GGG | 0.388716 | 5.2:-59416625 | None:intergenic |
| TACTGAGCATGGTGTTGTTC+CGG | 0.398936 | 5.2:+59416022 | MS.gene44895:CDS |
| CTTGTATCTATAAAATCAAT+AGG | 0.399051 | 5.2:-59418357 | None:intergenic |
| TAATCCTACAAATGATTGTA+TGG | 0.401174 | 5.2:+59417043 | MS.gene44895:CDS |
| CAATTTCCATTCAGTCTGCT+TGG | 0.404544 | 5.2:-59419258 | None:intergenic |
| GACTGATGGTTGTGATGTTC+GGG | 0.410135 | 5.2:-59418410 | None:intergenic |
| TGCATCACCATTCCTATGAT+TGG | 0.418131 | 5.2:-59417738 | None:intergenic |
| CCACAAGTCAAAAGGATGTC+TGG | 0.420331 | 5.2:-59417818 | None:intergenic |
| CATCCTGTTGTCGGGAGATA+AGG | 0.421944 | 5.2:+59416720 | MS.gene44895:CDS |
| CTCCAAATCAGTACAACTAA+TGG | 0.423674 | 5.2:-59417090 | None:intergenic |
| TATATTGTAGGCGCGCATTT+GGG | 0.425675 | 5.2:+59417936 | MS.gene44895:intron |
| TCGACATGCGGTCCAATCAT+AGG | 0.436742 | 5.2:+59417726 | MS.gene44895:CDS |
| CACTTTGAATTGTCCACATC+GGG | 0.441106 | 5.2:+59415995 | MS.gene44895:CDS |
| TGGTCATGAAGCGGGTTTCA+AGG | 0.442646 | 5.2:+59414796 | MS.gene44895:CDS |
| AGTTGTACTGATTTGGAGAC+TGG | 0.447052 | 5.2:+59417095 | MS.gene44895:CDS |
| CTGGAAAATGCTTTATGGTA+TGG | 0.452127 | 5.2:+59417325 | MS.gene44895:CDS |
| TAGACCATACAATCATTTGT+AGG | 0.454241 | 5.2:-59417047 | None:intergenic |
| TAACCTTATCTCCCGACAAC+AGG | 0.455373 | 5.2:-59416723 | None:intergenic |
| ATCTGAGACGGTCGAGGAGA+AGG | 0.459772 | 5.2:+59419118 | MS.gene44895:CDS |
| GGACAATCGTCTTCGTATAT+GGG | 0.460807 | 5.2:+59418071 | MS.gene44895:CDS |
| ACAGCGCAACTCACTTGGTC+TGG | 0.463787 | 5.2:-59416640 | None:intergenic |
| AATGAGAACTTTGGGGAAAG+AGG | 0.464363 | 5.2:-59414475 | None:intergenic |
| TAACACCCTTCAAAGCTGAA+TGG | 0.473837 | 5.2:+59418163 | MS.gene44895:CDS |
| ACAACAGCAAGTGACTCTAA+TGG | 0.474300 | 5.2:-59418291 | None:intergenic |
| AAAAGGATGTCTGGTTGCAT+TGG | 0.474611 | 5.2:-59417809 | None:intergenic |
| TAGGAATGGCATGTCTTAGC+TGG | 0.475369 | 5.2:-59416091 | None:intergenic |
| ACCTAGAACTCCCAGTTGCC+AGG | 0.480432 | 5.2:-59418464 | None:intergenic |
| CTATAAAATCAATAGGATGC+AGG | 0.481005 | 5.2:-59418350 | None:intergenic |
| AATATTACATGCCATCCATC+AGG | 0.482629 | 5.2:-59417146 | None:intergenic |
| AAAGAGGTTCTACGAGTAAC+CGG | 0.483672 | 5.2:-59414459 | None:intergenic |
| GATCATTTCCACAAGTCAAA+AGG | 0.485595 | 5.2:-59417826 | None:intergenic |
| GAAAGGACAACTTGGAGTCT+GGG | 0.485905 | 5.2:+59416839 | MS.gene44895:intron |
| AACACCCTTCAAAGCTGAAT+GGG | 0.487045 | 5.2:+59418164 | MS.gene44895:CDS |
| AAGAATAACATCCTGTTGTC+GGG | 0.488018 | 5.2:+59416712 | MS.gene44895:CDS |
| TTGAAACCCGCTTCATGACC+AGG | 0.490682 | 5.2:-59414794 | None:intergenic |
| GTGCTCGTGGCCGATAACTT+TGG | 0.491495 | 5.2:+59417371 | MS.gene44895:CDS |
| TTTACTAGGGGCCAAACACC+TGG | 0.499445 | 5.2:+59417306 | MS.gene44895:intron |
| ACTATGCACAATTTCTCGGC+TGG | 0.500089 | 5.2:-59418121 | None:intergenic |
| AAAGAAAACAAGGTTTCATA+GGG | 0.501938 | 5.2:-59414838 | None:intergenic |
| TATAAAATCAATAGGATGCA+GGG | 0.504604 | 5.2:-59418349 | None:intergenic |
| ATCGATGAATCCGATGATGA+TGG | 0.505501 | 5.2:+59419206 | MS.gene44895:CDS |
| GAAGAATAACATCCTGTTGT+CGG | 0.505802 | 5.2:+59416711 | MS.gene44895:CDS |
| CTGAGAAGAAACGTGGTAAG+AGG | 0.511583 | 5.2:+59419171 | MS.gene44895:CDS |
| TCATAAAAGAAAGGACAACT+TGG | 0.517742 | 5.2:+59416831 | MS.gene44895:intron |
| GGATCCCATTCAGCTTTGAA+GGG | 0.518856 | 5.2:-59418168 | None:intergenic |
| GAAAGCAAAATTGTGGTTTG+TGG | 0.518880 | 5.2:+59419143 | MS.gene44895:CDS |
| TCATCCACGTGATGATATCC+TGG | 0.520328 | 5.2:+59418446 | MS.gene44895:CDS |
| TAACAACACGCTTGTGCTCA+AGG | 0.528107 | 5.2:-59417996 | None:intergenic |
| AAGCTTATTCACCGGACTGA+TGG | 0.528676 | 5.2:-59418424 | None:intergenic |
| GTCTATTCCGCATCCTCAGA+TGG | 0.528780 | 5.2:+59417065 | MS.gene44895:CDS |
| TGATAACAGCGCAACTCACT+TGG | 0.530316 | 5.2:-59416645 | None:intergenic |
| AAAGATTGAGAAACTGGAAG+TGG | 0.531341 | 5.2:+59414596 | MS.gene44895:CDS |
| ATGGATATTCACTATGAGAA+AGG | 0.532012 | 5.2:+59417344 | MS.gene44895:CDS |
| CAAAATCCAAGCAGACTGAA+TGG | 0.532156 | 5.2:+59419252 | MS.gene44895:CDS |
| CTCTTTCAATGAGAACTTTG+GGG | 0.535912 | 5.2:-59414482 | None:intergenic |
| TGAGAAGGTTTACGAGAAAG+TGG | 0.536172 | 5.2:+59416866 | MS.gene44895:CDS |
| CTATGCACAATTTCTCGGCT+GGG | 0.540395 | 5.2:-59418120 | None:intergenic |
| CCATCAGGATTCAGGTTCAT+CGG | 0.543513 | 5.2:-59417131 | None:intergenic |
| AAGAAGCCTGGTCATGAAGC+GGG | 0.545678 | 5.2:+59414788 | MS.gene44895:CDS |
| CAAAATTCTTACTACGTCAC+AGG | 0.548895 | 5.2:+59418050 | MS.gene44895:CDS |
| AACTCTCAGAAAAGTTTGCA+AGG | 0.549049 | 5.2:+59414659 | MS.gene44895:CDS |
| GGTCATGAAGCGGGTTTCAA+GGG | 0.549246 | 5.2:+59414797 | MS.gene44895:CDS |
| GATATGCGTCACTTAGAAGC+TGG | 0.550288 | 5.2:+59417958 | MS.gene44895:CDS |
| AAGATTGAGAAACTGGAAGT+GGG | 0.551746 | 5.2:+59414597 | MS.gene44895:CDS |
| CCGATGAACCTGAATCCTGA+TGG | 0.557467 | 5.2:+59417131 | MS.gene44895:CDS |
| AAGAAACGTGGTAAGAGGAA+AGG | 0.563572 | 5.2:+59419176 | MS.gene44895:CDS |
| TAGTAGACGGATAACAAGCT+TGG | 0.565758 | 5.2:+59416675 | MS.gene44895:CDS |
| TTATAGGTGTGTAAGAAGCC+TGG | 0.566694 | 5.2:+59414776 | MS.gene44895:intron |
| ACAGGATGTTATTCTTCGTA+GGG | 0.566721 | 5.2:-59416705 | None:intergenic |
| GCAGTTGGTAGCAGAAGTCA+TGG | 0.572898 | 5.2:+59418386 | MS.gene44895:CDS |
| AATGGTTCCATCTGAGGATG+CGG | 0.574097 | 5.2:-59417072 | None:intergenic |
| ACAACTAATGGTTCCATCTG+AGG | 0.576667 | 5.2:-59417078 | None:intergenic |
| AGATACAAGTACAGGGCAGT+TGG | 0.578810 | 5.2:+59418371 | MS.gene44895:CDS |
| TGAGAAAGGTCTTGTGCTCG+TGG | 0.581673 | 5.2:+59417358 | MS.gene44895:CDS |
| GGAAATGAATCCATCATCAT+CGG | 0.582701 | 5.2:-59419216 | None:intergenic |
| TCTGTTCATTTGGAAGCCAA+AGG | 0.589673 | 5.2:+59419091 | MS.gene44895:CDS |
| CGTGGATGAAGCTTATTCAC+CGG | 0.591688 | 5.2:-59418432 | None:intergenic |
| TCGGTTCTTTAACATGGCAC+CGG | 0.592131 | 5.2:+59414440 | None:intergenic |
| CAAAGCTGAATGGGATCCAA+AGG | 0.592946 | 5.2:+59418173 | MS.gene44895:CDS |
| GAACATCACAACCATCAGTC+CGG | 0.595957 | 5.2:+59418413 | MS.gene44895:CDS |
| ACTTAGGCTTACCGTAGGAA+TGG | 0.598093 | 5.2:-59416105 | None:intergenic |
| ATGCGGTCCAATCATAGGAA+TGG | 0.598179 | 5.2:+59417731 | MS.gene44895:CDS |
| GGATGTTATTCTTCGTAGGG+TGG | 0.599457 | 5.2:-59416702 | None:intergenic |
| ATTGTCTCGCTGCTCGACAA+AGG | 0.600055 | 5.2:+59419277 | MS.gene44895:CDS |
| CTGGTTGCATTGGATTGCAA+TGG | 0.602433 | 5.2:-59417799 | None:intergenic |
| TAAGAAGCCTGGTCATGAAG+CGG | 0.617194 | 5.2:+59414787 | MS.gene44895:CDS |
| CATCGGGTCACTACTGAGCA+TGG | 0.620894 | 5.2:+59416011 | MS.gene44895:CDS |
| CGTTCAAACACATACTCCAA+AGG | 0.622066 | 5.2:-59416068 | None:intergenic |
| TTATCAGATATCATAGTAGA+CGG | 0.622532 | 5.2:+59416662 | MS.gene44895:CDS |
| GTGATGATATCCTGGCAACT+GGG | 0.623672 | 5.2:+59418454 | MS.gene44895:CDS |
| AACAGGATGTTATTCTTCGT+AGG | 0.624223 | 5.2:-59416706 | None:intergenic |
| GAAGGACGAAAGCAAAATTG+TGG | 0.625614 | 5.2:+59419136 | MS.gene44895:CDS |
| TGAAGAAGAAGAAGCACTCG+AGG | 0.627625 | 5.2:+59414533 | MS.gene44895:CDS |
| CCACTTTGAATTGTCCACAT+CGG | 0.628827 | 5.2:+59415994 | MS.gene44895:CDS |
| TGCTCAGTAGTGACCCGATG+TGG | 0.633127 | 5.2:-59416008 | None:intergenic |
| GCTAAGACATGCCATTCCTA+CGG | 0.637351 | 5.2:+59416094 | MS.gene44895:CDS |
| GCTTGTGCTCAAGGCTACAG+AGG | 0.642505 | 5.2:-59417987 | None:intergenic |
| TGAACCTGAATCCTGATGGA+TGG | 0.648338 | 5.2:+59417135 | MS.gene44895:CDS |
| CTTGTGCTCAAGGCTACAGA+GGG | 0.650690 | 5.2:-59417986 | None:intergenic |
| TCATTTACAGGGTCGACATG+CGG | 0.654000 | 5.2:+59417714 | MS.gene44895:intron |
| AGAAGAAGAAGCACTCGAGG+AGG | 0.667944 | 5.2:+59414536 | MS.gene44895:CDS |
| AGGATTCAGGTTCATCGGAG+AGG | 0.675833 | 5.2:-59417126 | None:intergenic |
| CCGATGTGGACAATTCAAAG+TGG | 0.705167 | 5.2:-59415994 | None:intergenic |
| GGAAAAGCTGAGAAGAAACG+TGG | 0.725862 | 5.2:+59419164 | MS.gene44895:CDS |
| GTTGCCAGGATATCATCACG+TGG | 0.762098 | 5.2:-59418450 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTTAAGAAAAAACATT+TGG | - | chr5.2:59417177-59417196 | None:intergenic | 10.0% |
| !!! | TAAAATTTTCACTTATATAA+CGG | - | chr5.2:59418320-59418339 | None:intergenic | 10.0% |
| !!! | TATATAAGTGAAAATTTTAA+TGG | + | chr5.2:59418321-59418340 | MS.gene44895:CDS | 10.0% |
| !! | AAGCTATATTATTAATCTTA+AGG | + | chr5.2:59419036-59419055 | MS.gene44895:intron | 15.0% |
| !! | AATCAAAATTTCAACTTTAA+AGG | - | chr5.2:59418810-59418829 | None:intergenic | 15.0% |
| !! | AGCTATATTATTAATCTTAA+GGG | + | chr5.2:59419037-59419056 | MS.gene44895:intron | 15.0% |
| !! | ATGTAATTTACAGTAATAAT+AGG | - | chr5.2:59416749-59416768 | None:intergenic | 15.0% |
| !! | ATTCTTAAAAAGATAAATGT+TGG | - | chr5.2:59417608-59417627 | None:intergenic | 15.0% |
| !! | TATACAAATAAAAAAGGAAA+TGG | - | chr5.2:59415688-59415707 | None:intergenic | 15.0% |
| !! | TTTGTTAATTAGATATACAT+AGG | + | chr5.2:59418985-59419004 | MS.gene44895:intron | 15.0% |
| !!! | ATATTTTAAAAGAATGACTT+AGG | - | chr5.2:59416124-59416143 | None:intergenic | 15.0% |
| !!! | TTGAATATGTTTCTTTTAAT+TGG | + | chr5.2:59417510-59417529 | MS.gene44895:intron | 15.0% |
| !! | AAAAAAATTCATAACTACGA+AGG | - | chr5.2:59417552-59417571 | None:intergenic | 20.0% |
| !! | AAAAAATTCATAACTACGAA+GGG | - | chr5.2:59417551-59417570 | None:intergenic | 20.0% |
| !! | AAAATAAGTAGAAACGAAAA+GGG | - | chr5.2:59418240-59418259 | None:intergenic | 20.0% |
| !! | AATATTGTTTATGTAATTGC+AGG | + | chr5.2:59418266-59418285 | MS.gene44895:intron | 20.0% |
| !! | ATAATTACATGACTGAAAAA+AGG | - | chr5.2:59416299-59416318 | None:intergenic | 20.0% |
| !! | ATTTCTCATATTGTTTGTAT+GGG | + | chr5.2:59414890-59414909 | MS.gene44895:intron | 20.0% |
| !! | CTGATAATAGTTTAAGAAAA+TGG | + | chr5.2:59415203-59415222 | MS.gene44895:intron | 20.0% |
| !! | CTTGTATCTATAAAATCAAT+AGG | - | chr5.2:59418360-59418379 | None:intergenic | 20.0% |
| !! | GAACTTGAATATGTATAAAA+AGG | - | chr5.2:59417867-59417886 | None:intergenic | 20.0% |
| !! | GTTGCATATACAAATAAAAA+AGG | - | chr5.2:59415694-59415713 | None:intergenic | 20.0% |
| !! | TAAAATAAGTAGAAACGAAA+AGG | - | chr5.2:59418241-59418260 | None:intergenic | 20.0% |
| !! | TAATTACATGACTGAAAAAA+GGG | - | chr5.2:59416298-59416317 | None:intergenic | 20.0% |
| !! | TCCACAATGAAAATATTAAA+AGG | - | chr5.2:59416432-59416451 | None:intergenic | 20.0% |
| !! | TCCATATAAAATCATCTTTA+AGG | - | chr5.2:59415062-59415081 | None:intergenic | 20.0% |
| !! | TGAATGATACATAAACATTA+TGG | - | chr5.2:59416530-59416549 | None:intergenic | 20.0% |
| !!! | AATATATTTTGCTATAATGC+CGG | - | chr5.2:59415400-59415419 | None:intergenic | 20.0% |
| !!! | AGTTTTCCTATTAAAAAATC+AGG | - | chr5.2:59415586-59415605 | None:intergenic | 20.0% |
| !!! | ATGAATTTTTTTCTTGGTTA+GGG | + | chr5.2:59417560-59417579 | MS.gene44895:intron | 20.0% |
| !!! | ATTTTATAGATACAAGTACA+GGG | + | chr5.2:59418364-59418383 | MS.gene44895:CDS | 20.0% |
| !!! | GTAGTTATGAATTTTTTTCT+TGG | + | chr5.2:59417554-59417573 | MS.gene44895:intron | 20.0% |
| !!! | GTTACTTGATATAATTTTTC+AGG | + | chr5.2:59419066-59419085 | MS.gene44895:intron | 20.0% |
| !!! | TATGAATTTTTTTCTTGGTT+AGG | + | chr5.2:59417559-59417578 | MS.gene44895:intron | 20.0% |
| !!! | TATTACATTTTAGGACTATA+TGG | - | chr5.2:59417457-59417476 | None:intergenic | 20.0% |
| !!! | TATTGGAATTTTGTTGTTAT+AGG | + | chr5.2:59414760-59414779 | MS.gene44895:intron | 20.0% |
| !!! | TCCTTAAAGATGATTTTATA+TGG | + | chr5.2:59415058-59415077 | MS.gene44895:intron | 20.0% |
| !!! | TCCTTTTAATATTTTCATTG+TGG | + | chr5.2:59416428-59416447 | MS.gene44895:intron | 20.0% |
| !!! | TGTATGTGTTATTTTTACTA+GGG | + | chr5.2:59417293-59417312 | MS.gene44895:intron | 20.0% |
| !!! | TTGTATGTGTTATTTTTACT+AGG | + | chr5.2:59417292-59417311 | MS.gene44895:intron | 20.0% |
| !!! | TTTGATTTACAAAATTGCAA+GGG | + | chr5.2:59418823-59418842 | MS.gene44895:intron | 20.0% |
| !!! | TTTTAATTGAGAAACTTTGT+AGG | + | chr5.2:59417018-59417037 | MS.gene44895:intron | 20.0% |
| !!! | TTTTATTTTACTAGTGAATG+TGG | + | chr5.2:59414916-59414935 | MS.gene44895:intron | 20.0% |
| !!! | TTTTGATTTACAAAATTGCA+AGG | + | chr5.2:59418822-59418841 | MS.gene44895:intron | 20.0% |
| ! | AAAAATGATGTGTTTGTTTG+AGG | + | chr5.2:59414995-59415014 | MS.gene44895:intron | 25.0% |
| ! | AAAGAAAACAAGGTTTCATA+GGG | - | chr5.2:59414841-59414860 | None:intergenic | 25.0% |
| ! | AAAGATAAATGTTGGAAAGA+TGG | - | chr5.2:59417600-59417619 | None:intergenic | 25.0% |
| ! | AAAGGCTTAAAAATTTGAAG+AGG | - | chr5.2:59418792-59418811 | None:intergenic | 25.0% |
| ! | AAATGAAAAGATTGAGAAAC+TGG | + | chr5.2:59414590-59414609 | MS.gene44895:CDS | 25.0% |
| ! | AAGAAGAAGAAGAAGAAAAT+GGG | + | chr5.2:59414559-59414578 | MS.gene44895:CDS | 25.0% |
| ! | CAAAATGGTTTCTATATTGT+AGG | + | chr5.2:59417924-59417943 | MS.gene44895:intron | 25.0% |
| ! | CAATATGGTATATTGTGATT+TGG | + | chr5.2:59416231-59416250 | MS.gene44895:intron | 25.0% |
| ! | CATTTCTCATATTGTTTGTA+TGG | + | chr5.2:59414889-59414908 | MS.gene44895:intron | 25.0% |
| ! | CTGCTTTAATCATAAAAGAA+AGG | + | chr5.2:59416822-59416841 | MS.gene44895:intron | 25.0% |
| ! | GAAAATGAACAATTACATGA+AGG | - | chr5.2:59416956-59416975 | None:intergenic | 25.0% |
| ! | GTTGAAAAGTTTGCATATTA+CGG | - | chr5.2:59415640-59415659 | None:intergenic | 25.0% |
| ! | TAAGCCTTCAATTTATGAAT+AGG | - | chr5.2:59416382-59416401 | None:intergenic | 25.0% |
| ! | TAATCCTACAAATGATTGTA+TGG | + | chr5.2:59417043-59417062 | MS.gene44895:CDS | 25.0% |
| ! | TATAAAATCAATAGGATGCA+GGG | - | chr5.2:59418352-59418371 | None:intergenic | 25.0% |
| ! | TATGATTAAAGCAGAAAAAG+AGG | - | chr5.2:59416816-59416835 | None:intergenic | 25.0% |
| ! | TCATATATGAAGGACTAAAT+AGG | - | chr5.2:59416505-59416524 | None:intergenic | 25.0% |
| ! | TTAAACAAAAAAGCTACCTT+TGG | - | chr5.2:59418192-59418211 | None:intergenic | 25.0% |
| ! | TTATCAGATATCATAGTAGA+CGG | + | chr5.2:59416662-59416681 | MS.gene44895:CDS | 25.0% |
| ! | TTCTGTATCCATACTATTAA+AGG | - | chr5.2:59419017-59419036 | None:intergenic | 25.0% |
| !! | AATTGGTTTCATATATGACA+TGG | - | chr5.2:59417665-59417684 | None:intergenic | 25.0% |
| !! | ATCTTTTGTCATACATAGAA+AGG | - | chr5.2:59418565-59418584 | None:intergenic | 25.0% |
| !! | CTGTTTTATGTGTTTCAATA+TGG | + | chr5.2:59416216-59416235 | MS.gene44895:intron | 25.0% |
| !! | GATGATTTTATATGGAACAA+AGG | + | chr5.2:59415066-59415085 | MS.gene44895:intron | 25.0% |
| !! | GATTTTATAGATACAAGTAC+AGG | + | chr5.2:59418363-59418382 | MS.gene44895:CDS | 25.0% |
| !! | TAAGTTGCGATTTTTCTTAT+GGG | + | chr5.2:59414737-59414756 | MS.gene44895:intron | 25.0% |
| !! | TTTATCGATTAGCAATATGA+TGG | + | chr5.2:59415851-59415870 | MS.gene44895:intron | 25.0% |
| !!! | ACATGACCTGATTTTTTAAT+AGG | + | chr5.2:59415577-59415596 | MS.gene44895:intron | 25.0% |
| !!! | AGAATTTTGTTTCCAGTTAT+TGG | - | chr5.2:59418039-59418058 | None:intergenic | 25.0% |
| !!! | ATGATTGATTTGTTCTTGTA+AGG | + | chr5.2:59415115-59415134 | MS.gene44895:intron | 25.0% |
| !!! | CTTTAGTTTTGAAGAATGTT+TGG | + | chr5.2:59416153-59416172 | MS.gene44895:intron | 25.0% |
| !!! | GTATGTGTTATTTTTACTAG+GGG | + | chr5.2:59417294-59417313 | MS.gene44895:intron | 25.0% |
| !!! | TAACTTTGCTACCTTTTTTA+TGG | - | chr5.2:59417772-59417791 | None:intergenic | 25.0% |
| !!! | TCTTGTTGGTTTAAAACATT+GGG | + | chr5.2:59418656-59418675 | MS.gene44895:intron | 25.0% |
| !!! | TTAAGTTGCGATTTTTCTTA+TGG | + | chr5.2:59414736-59414755 | MS.gene44895:intron | 25.0% |
| AAAAAAGGTAGCAAAGTTAC+TGG | + | chr5.2:59417773-59417792 | MS.gene44895:CDS | 30.0% | |
| AAAATTGAACCTACACAAAG+TGG | + | chr5.2:59418690-59418709 | MS.gene44895:intron | 30.0% | |
| AAAGAATCACAACTGCAAAT+TGG | - | chr5.2:59416193-59416212 | None:intergenic | 30.0% | |
| ACGATTAGTATGATTATCTG+AGG | - | chr5.2:59418502-59418521 | None:intergenic | 30.0% | |
| ACTATCCTAGATTCACAATT+AGG | + | chr5.2:59415447-59415466 | MS.gene44895:intron | 30.0% | |
| AGAAGAAGAAGAAGAAAATG+GGG | + | chr5.2:59414560-59414579 | MS.gene44895:CDS | 30.0% | |
| ATGGATATTCACTATGAGAA+AGG | + | chr5.2:59417344-59417363 | MS.gene44895:CDS | 30.0% | |
| ATGTTGATATTCAACTTACC+AGG | - | chr5.2:59414872-59414891 | None:intergenic | 30.0% | |
| ATTACCCTAATTGTGAATCT+AGG | - | chr5.2:59415455-59415474 | None:intergenic | 30.0% | |
| ATTCACAATTAGGGTAATAG+TGG | + | chr5.2:59415457-59415476 | MS.gene44895:intron | 30.0% | |
| CAAAGAAAACAAGGTTTCAT+AGG | - | chr5.2:59414842-59414861 | None:intergenic | 30.0% | |
| CACACCTATTCATAAATTGA+AGG | + | chr5.2:59416375-59416394 | MS.gene44895:intron | 30.0% | |
| CAGTGTAAACGAAAAAGTAA+TGG | - | chr5.2:59416262-59416281 | None:intergenic | 30.0% | |
| CATTATGGACTCATATATGA+AGG | - | chr5.2:59416515-59416534 | None:intergenic | 30.0% | |
| CTATAAAATCAATAGGATGC+AGG | - | chr5.2:59418353-59418372 | None:intergenic | 30.0% | |
| CTATAGCCAACAAAATTTGA+TGG | - | chr5.2:59417487-59417506 | None:intergenic | 30.0% | |
| CTATCCTAGATTCACAATTA+GGG | + | chr5.2:59415448-59415467 | MS.gene44895:intron | 30.0% | |
| CTTCAATTTATGAATAGGTG+TGG | - | chr5.2:59416377-59416396 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGAAGAAAA+TGG | + | chr5.2:59414558-59414577 | MS.gene44895:CDS | 30.0% | |
| GACTTATTTCAACTGTTATG+CGG | + | chr5.2:59415736-59415755 | MS.gene44895:intron | 30.0% | |
| GAGAGAAAAATATTGAGACA+AGG | - | chr5.2:59415889-59415908 | None:intergenic | 30.0% | |
| GTGAAGAAAACCAAAGTTAT+CGG | - | chr5.2:59417384-59417403 | None:intergenic | 30.0% | |
| TACATGAGTTTACTCTTCAA+TGG | - | chr5.2:59418869-59418888 | None:intergenic | 30.0% | |
| TAGACCATACAATCATTTGT+AGG | - | chr5.2:59417050-59417069 | None:intergenic | 30.0% | |
| TAGTCATTGAGTCCAAAAAA+AGG | + | chr5.2:59417631-59417650 | MS.gene44895:intron | 30.0% | |
| TCATAAAAGAAAGGACAACT+TGG | + | chr5.2:59416831-59416850 | MS.gene44895:intron | 30.0% | |
| TCTCTTTCAATGAGAACTTT+GGG | - | chr5.2:59414486-59414505 | None:intergenic | 30.0% | |
| TGTCTGACATCAATAAATGT+CGG | + | chr5.2:59415237-59415256 | MS.gene44895:intron | 30.0% | |
| ! | ATAAAATGAAGAGTGTGTCT+GGG | - | chr5.2:59415836-59415855 | None:intergenic | 30.0% |
| ! | ATGCAATAGTGGGAAAAAAA+GGG | + | chr5.2:59415509-59415528 | MS.gene44895:intron | 30.0% |
| ! | CAGTCTAGAACTCAAATAAA+AGG | + | chr5.2:59415329-59415348 | MS.gene44895:intron | 30.0% |
| ! | GGAGGGATATATTACATTTT+AGG | - | chr5.2:59417466-59417485 | None:intergenic | 30.0% |
| ! | GGAGTTTTACAAAGAAAACA+AGG | - | chr5.2:59414851-59414870 | None:intergenic | 30.0% |
| ! | GGATTCTATCTTTGGTAATA+TGG | + | chr5.2:59418092-59418111 | MS.gene44895:CDS | 30.0% |
| ! | TGTCTCAATATTTTTCTCTC+TGG | + | chr5.2:59415889-59415908 | MS.gene44895:intron | 30.0% |
| ! | TGTGGTTTGATGATATATGA+TGG | + | chr5.2:59414934-59414953 | MS.gene44895:intron | 30.0% |
| ! | TGTTTTCTTTGTAAAACTCC+TGG | + | chr5.2:59414851-59414870 | MS.gene44895:CDS | 30.0% |
| ! | TTTAGCACTCACTCTTTTAT+TGG | - | chr5.2:59418737-59418756 | None:intergenic | 30.0% |
| !! | AACCATTAGTTGTACTGATT+TGG | + | chr5.2:59417088-59417107 | MS.gene44895:CDS | 30.0% |
| !! | AAGTTTGCAAGGTTTGTTAA+TGG | + | chr5.2:59414670-59414689 | MS.gene44895:intron | 30.0% |
| !! | CTCTTGTTGGTTTAAAACAT+TGG | + | chr5.2:59418655-59418674 | MS.gene44895:intron | 30.0% |
| !! | GAACAAAGGTGATTTTGTTT+TGG | + | chr5.2:59415080-59415099 | MS.gene44895:intron | 30.0% |
| !! | GCAGTTTTGATCCATAAAAA+AGG | + | chr5.2:59417758-59417777 | MS.gene44895:CDS | 30.0% |
| !! | GTTTTGATGCTAATAGGAAA+GGG | + | chr5.2:59414619-59414638 | MS.gene44895:CDS | 30.0% |
| !!! | ATGGCTATAGATCCTTTTTT+TGG | - | chr5.2:59417646-59417665 | None:intergenic | 30.0% |
| !!! | CTTTTATTTGAGTTCTAGAC+TGG | - | chr5.2:59415331-59415350 | None:intergenic | 30.0% |
| AAAGATTGAGAAACTGGAAG+TGG | + | chr5.2:59414596-59414615 | MS.gene44895:CDS | 35.0% | |
| AACACCTGGAAAATGCTTTA+TGG | + | chr5.2:59417320-59417339 | MS.gene44895:CDS | 35.0% | |
| AACAGGATGTTATTCTTCGT+AGG | - | chr5.2:59416709-59416728 | None:intergenic | 35.0% | |
| AACTCTCAGAAAAGTTTGCA+AGG | + | chr5.2:59414659-59414678 | MS.gene44895:CDS | 35.0% | |
| AAGAATAACATCCTGTTGTC+GGG | + | chr5.2:59416712-59416731 | MS.gene44895:CDS | 35.0% | |
| AAGATTGAGAAACTGGAAGT+GGG | + | chr5.2:59414597-59414616 | MS.gene44895:CDS | 35.0% | |
| AATATTACATGCCATCCATC+AGG | - | chr5.2:59417149-59417168 | None:intergenic | 35.0% | |
| ACAGGATGTTATTCTTCGTA+GGG | - | chr5.2:59416708-59416727 | None:intergenic | 35.0% | |
| ACATGCATGCTGAAACAAAA+TGG | + | chr5.2:59417909-59417928 | MS.gene44895:intron | 35.0% | |
| ACATTTACAGAATGACCTTG+AGG | - | chr5.2:59417241-59417260 | None:intergenic | 35.0% | |
| AGAGTATGTTATGCCATGTT+TGG | + | chr5.2:59415022-59415041 | MS.gene44895:intron | 35.0% | |
| AGCCAACAAAATTTGATGGA+GGG | - | chr5.2:59417483-59417502 | None:intergenic | 35.0% | |
| AGCTAATGTAGATGCAATAG+TGG | + | chr5.2:59415498-59415517 | MS.gene44895:intron | 35.0% | |
| AGGAATCAGTGGCTAAATAA+AGG | - | chr5.2:59416796-59416815 | None:intergenic | 35.0% | |
| ATTTGTTCTTGTAAGGACTG+GGG | + | chr5.2:59415122-59415141 | MS.gene44895:intron | 35.0% | |
| CAAAATTCTTACTACGTCAC+AGG | + | chr5.2:59418050-59418069 | MS.gene44895:CDS | 35.0% | |
| CAAGTCAATATCGCAAAAGA+TGG | - | chr5.2:59415965-59415984 | None:intergenic | 35.0% | |
| CAGAAAAACCTCTAAACCTT+TGG | + | chr5.2:59416052-59416071 | MS.gene44895:CDS | 35.0% | |
| CATCAATAAATGTCGGATAC+TGG | + | chr5.2:59415244-59415263 | MS.gene44895:intron | 35.0% | |
| CATGACTATGCACAATTTCT+CGG | - | chr5.2:59418128-59418147 | None:intergenic | 35.0% | |
| CGTATATGGGATTCTATCTT+TGG | + | chr5.2:59418084-59418103 | MS.gene44895:CDS | 35.0% | |
| CTCCAAATCAGTACAACTAA+TGG | - | chr5.2:59417093-59417112 | None:intergenic | 35.0% | |
| CTCTTTCAATGAGAACTTTG+GGG | - | chr5.2:59414485-59414504 | None:intergenic | 35.0% | |
| CTGGAAAATGCTTTATGGTA+TGG | + | chr5.2:59417325-59417344 | MS.gene44895:CDS | 35.0% | |
| GAAAGCAAAATTGTGGTTTG+TGG | + | chr5.2:59419143-59419162 | MS.gene44895:CDS | 35.0% | |
| GAACAATTACATGAAGGTTG+TGG | - | chr5.2:59416950-59416969 | None:intergenic | 35.0% | |
| GAAGAATAACATCCTGTTGT+CGG | + | chr5.2:59416711-59416730 | MS.gene44895:CDS | 35.0% | |
| GAGTATGTTATGCCATGTTT+GGG | + | chr5.2:59415023-59415042 | MS.gene44895:intron | 35.0% | |
| GATATGTCTGGTATGCTAAT+TGG | - | chr5.2:59417682-59417701 | None:intergenic | 35.0% | |
| GATCATTTCCACAAGTCAAA+AGG | - | chr5.2:59417829-59417848 | None:intergenic | 35.0% | |
| GCATATTTCTCTCCAATAAC+TGG | + | chr5.2:59418024-59418043 | MS.gene44895:CDS | 35.0% | |
| GCTAATGTAGATGCAATAGT+GGG | + | chr5.2:59415499-59415518 | MS.gene44895:intron | 35.0% | |
| GGAAATGAATCCATCATCAT+CGG | - | chr5.2:59419219-59419238 | None:intergenic | 35.0% | |
| GGACTTTGCCTTTAATAGTA+TGG | + | chr5.2:59419006-59419025 | MS.gene44895:intron | 35.0% | |
| GGGAAAAAAAGGGAATCTTA+GGG | + | chr5.2:59415519-59415538 | MS.gene44895:intron | 35.0% | |
| GTCTCTTTCAATGAGAACTT+TGG | - | chr5.2:59414487-59414506 | None:intergenic | 35.0% | |
| TAGCCAACAAAATTTGATGG+AGG | - | chr5.2:59417484-59417503 | None:intergenic | 35.0% | |
| TGGGAAAAAAAGGGAATCTT+AGG | + | chr5.2:59415518-59415537 | MS.gene44895:intron | 35.0% | |
| TGTATCATTCACTTTGTTCC+AGG | + | chr5.2:59416539-59416558 | MS.gene44895:intron | 35.0% | |
| TTGCATATTACGGTGAATCT+AGG | - | chr5.2:59415630-59415649 | None:intergenic | 35.0% | |
| ! | AAGGTTTAGAGGTTTTTCTG+CGG | - | chr5.2:59416052-59416071 | None:intergenic | 35.0% |
| ! | AGAGTTTTTGCTCGAACTTA+GGG | + | chr5.2:59416405-59416424 | MS.gene44895:intron | 35.0% |
| ! | ATCCCTCCATCAAATTTTGT+TGG | + | chr5.2:59417478-59417497 | MS.gene44895:intron | 35.0% |
| ! | ATTGTGAATCTAGGATAGTG+TGG | - | chr5.2:59415446-59415465 | None:intergenic | 35.0% |
| ! | GATAAAATGAAGAGTGTGTC+TGG | - | chr5.2:59415837-59415856 | None:intergenic | 35.0% |
| ! | GATGCAATAGTGGGAAAAAA+AGG | + | chr5.2:59415508-59415527 | MS.gene44895:intron | 35.0% |
| ! | GATTTGTTCTTGTAAGGACT+GGG | + | chr5.2:59415121-59415140 | MS.gene44895:intron | 35.0% |
| ! | GCGATTTTTCTTATGGGTAT+TGG | + | chr5.2:59414743-59414762 | MS.gene44895:intron | 35.0% |
| ! | TTTAGGACTATATGGACATG+CGG | - | chr5.2:59417449-59417468 | None:intergenic | 35.0% |
| ! | TTTCTGAGAGTTAGCGTAAT+GGG | - | chr5.2:59414651-59414670 | None:intergenic | 35.0% |
| !! | AACCTTCTGTGTCATTTACA+GGG | + | chr5.2:59417703-59417722 | MS.gene44895:intron | 35.0% |
| !! | AAGTGGGTTTTGATGCTAAT+AGG | + | chr5.2:59414613-59414632 | MS.gene44895:CDS | 35.0% |
| !! | ACTCTATCTGCTATTTCACA+TGG | + | chr5.2:59415778-59415797 | MS.gene44895:intron | 35.0% |
| !! | CAAGGTTTGTTAATGGTCAT+TGG | + | chr5.2:59414677-59414696 | MS.gene44895:intron | 35.0% |
| !! | CATACCATAAAGCATTTTCC+AGG | - | chr5.2:59417327-59417346 | None:intergenic | 35.0% |
| !! | GGTTTTGATGCTAATAGGAA+AGG | + | chr5.2:59414618-59414637 | MS.gene44895:CDS | 35.0% |
| !! | TAAAGCATTTTCCAGGTGTT+TGG | - | chr5.2:59417320-59417339 | None:intergenic | 35.0% |
| !! | TAACCTTCTGTGTCATTTAC+AGG | + | chr5.2:59417702-59417721 | MS.gene44895:intron | 35.0% |
| !! | TGATTTGTTCTTGTAAGGAC+TGG | + | chr5.2:59415120-59415139 | MS.gene44895:intron | 35.0% |
| !! | TTTTCTGAGAGTTAGCGTAA+TGG | - | chr5.2:59414652-59414671 | None:intergenic | 35.0% |
| !!! | CTTTTGCGATATTGACTTGA+AGG | + | chr5.2:59415966-59415985 | MS.gene44895:intron | 35.0% |
| !!! | GTATGAGTGTTAGTTTTGTC+CGG | - | chr5.2:59415182-59415201 | None:intergenic | 35.0% |
| !!! | TTTTCAGGTCTCTGTTCATT+TGG | + | chr5.2:59419081-59419100 | MS.gene44895:intron | 35.0% |
| AAAAGGATGTCTGGTTGCAT+TGG | - | chr5.2:59417812-59417831 | None:intergenic | 40.0% | |
| AAAGAGGTTCTACGAGTAAC+CGG | - | chr5.2:59414462-59414481 | None:intergenic | 40.0% | |
| AACACCCTTCAAAGCTGAAT+GGG | + | chr5.2:59418164-59418183 | MS.gene44895:CDS | 40.0% | |
| AAGAAACGTGGTAAGAGGAA+AGG | + | chr5.2:59419176-59419195 | MS.gene44895:CDS | 40.0% | |
| ACAACAGCAAGTGACTCTAA+TGG | - | chr5.2:59418294-59418313 | None:intergenic | 40.0% | |
| ACAACTAATGGTTCCATCTG+AGG | - | chr5.2:59417081-59417100 | None:intergenic | 40.0% | |
| AGCAGAAAAAGAGGAATCAG+TGG | - | chr5.2:59416807-59416826 | None:intergenic | 40.0% | |
| AGGACAATCGTCTTCGTATA+TGG | + | chr5.2:59418070-59418089 | MS.gene44895:CDS | 40.0% | |
| ATCGATGAATCCGATGATGA+TGG | + | chr5.2:59419206-59419225 | MS.gene44895:CDS | 40.0% | |
| ATGTTATGCCATGTTTGGGA+AGG | + | chr5.2:59415027-59415046 | MS.gene44895:intron | 40.0% | |
| ATTGAACCTACACAAAGTGG+TGG | + | chr5.2:59418693-59418712 | MS.gene44895:intron | 40.0% | |
| CAAAATCCAAGCAGACTGAA+TGG | + | chr5.2:59419252-59419271 | MS.gene44895:CDS | 40.0% | |
| CAATTTCCATTCAGTCTGCT+TGG | - | chr5.2:59419261-59419280 | None:intergenic | 40.0% | |
| CACAGAAGGTTAGATATGTC+TGG | - | chr5.2:59417694-59417713 | None:intergenic | 40.0% | |
| CACATACTCCAAAGGTTTAG+AGG | - | chr5.2:59416063-59416082 | None:intergenic | 40.0% | |
| CACTTTGAATTGTCCACATC+GGG | + | chr5.2:59415995-59416014 | MS.gene44895:CDS | 40.0% | |
| CCACTTTGAATTGTCCACAT+CGG | + | chr5.2:59415994-59416013 | MS.gene44895:CDS | 40.0% | |
| CGTTCAAACACATACTCCAA+AGG | - | chr5.2:59416071-59416090 | None:intergenic | 40.0% | |
| GAAGGACGAAAGCAAAATTG+TGG | + | chr5.2:59419136-59419155 | MS.gene44895:CDS | 40.0% | |
| GACGCAATGTTATCAAACAC+CGG | + | chr5.2:59415378-59415397 | MS.gene44895:intron | 40.0% | |
| GCCAAAGGAAAAATCTGAGA+CGG | + | chr5.2:59419106-59419125 | MS.gene44895:CDS | 40.0% | |
| GGACAATCGTCTTCGTATAT+GGG | + | chr5.2:59418071-59418090 | MS.gene44895:CDS | 40.0% | |
| TAACACCCTTCAAAGCTGAA+TGG | + | chr5.2:59418163-59418182 | MS.gene44895:CDS | 40.0% | |
| TAGTAGACGGATAACAAGCT+TGG | + | chr5.2:59416675-59416694 | MS.gene44895:CDS | 40.0% | |
| TATATTGTAGGCGCGCATTT+GGG | + | chr5.2:59417936-59417955 | MS.gene44895:intron | 40.0% | |
| TCTAGTACTCACTCTCTTGT+TGG | + | chr5.2:59418642-59418661 | MS.gene44895:intron | 40.0% | |
| TCTGTTCATTTGGAAGCCAA+AGG | + | chr5.2:59419091-59419110 | MS.gene44895:CDS | 40.0% | |
| TGAGAAGGTTTACGAGAAAG+TGG | + | chr5.2:59416866-59416885 | MS.gene44895:CDS | 40.0% | |
| TGCATCACCATTCCTATGAT+TGG | - | chr5.2:59417741-59417760 | None:intergenic | 40.0% | |
| TGTTCCAGGCTATTGATCAT+AGG | + | chr5.2:59416553-59416572 | MS.gene44895:intron | 40.0% | |
| TTATAGGTGTGTAAGAAGCC+TGG | + | chr5.2:59414776-59414795 | MS.gene44895:intron | 40.0% | |
| TTGAACCTACACAAAGTGGT+GGG | + | chr5.2:59418694-59418713 | MS.gene44895:intron | 40.0% | |
| ! | AATGAGAACTTTGGGGAAAG+AGG | - | chr5.2:59414478-59414497 | None:intergenic | 40.0% |
| ! | ACCGTCTCAGATTTTTCCTT+TGG | - | chr5.2:59419110-59419129 | None:intergenic | 40.0% |
| ! | AGGTTTAGAGGTTTTTCTGC+GGG | - | chr5.2:59416051-59416070 | None:intergenic | 40.0% |
| ! | CATTCAGTCTGCTTGGATTT+TGG | - | chr5.2:59419254-59419273 | None:intergenic | 40.0% |
| ! | GAGAGTTTTTGCTCGAACTT+AGG | + | chr5.2:59416404-59416423 | MS.gene44895:intron | 40.0% |
| ! | GGTGTTTGATAACATTGCGT+CGG | - | chr5.2:59415379-59415398 | None:intergenic | 40.0% |
| ! | GTCGACTCACAGATTGAAAT+CGG | - | chr5.2:59415273-59415292 | None:intergenic | 40.0% |
| ! | GTTGAAAAGTGAGTGTTGCT+AGG | + | chr5.2:59418763-59418782 | MS.gene44895:intron | 40.0% |
| ! | TAACTACGAAGGGCATGTAA+TGG | - | chr5.2:59417541-59417560 | None:intergenic | 40.0% |
| ! | TGGTCTGGAATCACACATTT+GGG | - | chr5.2:59416628-59416647 | None:intergenic | 40.0% |
| ! | TTGGTCTGGAATCACACATT+TGG | - | chr5.2:59416629-59416648 | None:intergenic | 40.0% |
| !! | AGTTGTACTGATTTGGAGAC+TGG | + | chr5.2:59417095-59417114 | MS.gene44895:CDS | 40.0% |
| !! | CAGCTTTGAAGGGTGTTAAA+TGG | - | chr5.2:59418161-59418180 | None:intergenic | 40.0% |
| !! | TTAGAGTCACTTGCTGTTGT+TGG | + | chr5.2:59418294-59418313 | MS.gene44895:CDS | 40.0% |
| AAGCTTATTCACCGGACTGA+TGG | - | chr5.2:59418427-59418446 | None:intergenic | 45.0% | |
| AATGGTTCCATCTGAGGATG+CGG | - | chr5.2:59417075-59417094 | None:intergenic | 45.0% | |
| ACGTCTACATCCGTGTTTAC+AGG | - | chr5.2:59415154-59415173 | None:intergenic | 45.0% | |
| ACTATGCACAATTTCTCGGC+TGG | - | chr5.2:59418124-59418143 | None:intergenic | 45.0% | |
| ACTTAGGCTTACCGTAGGAA+TGG | - | chr5.2:59416108-59416127 | None:intergenic | 45.0% | |
| AGAAAGGACAACTTGGAGTC+TGG | + | chr5.2:59416838-59416857 | MS.gene44895:intron | 45.0% | |
| AGATACAAGTACAGGGCAGT+TGG | + | chr5.2:59418371-59418390 | MS.gene44895:CDS | 45.0% | |
| ATGCGGTCCAATCATAGGAA+TGG | + | chr5.2:59417731-59417750 | MS.gene44895:CDS | 45.0% | |
| CAAAGCTGAATGGGATCCAA+AGG | + | chr5.2:59418173-59418192 | MS.gene44895:CDS | 45.0% | |
| CCACAAGTCAAAAGGATGTC+TGG | - | chr5.2:59417821-59417840 | None:intergenic | 45.0% | |
| CCATGTTTGGGAAGGAATTG+AGG | + | chr5.2:59415035-59415054 | MS.gene44895:intron | 45.0% | |
| CCGATGTGGACAATTCAAAG+TGG | - | chr5.2:59415997-59416016 | None:intergenic | 45.0% | |
| CCTCAATTCCTTCCCAAACA+TGG | - | chr5.2:59415038-59415057 | None:intergenic | 45.0% | |
| CTATATTGTAGGCGCGCATT+TGG | + | chr5.2:59417935-59417954 | MS.gene44895:intron | 45.0% | |
| CTATGCACAATTTCTCGGCT+GGG | - | chr5.2:59418123-59418142 | None:intergenic | 45.0% | |
| CTGAGAAGAAACGTGGTAAG+AGG | + | chr5.2:59419171-59419190 | MS.gene44895:CDS | 45.0% | |
| CTGGTTGCATTGGATTGCAA+TGG | - | chr5.2:59417802-59417821 | None:intergenic | 45.0% | |
| GAAAGGACAACTTGGAGTCT+GGG | + | chr5.2:59416839-59416858 | MS.gene44895:intron | 45.0% | |
| GAACATCACAACCATCAGTC+CGG | + | chr5.2:59418413-59418432 | MS.gene44895:CDS | 45.0% | |
| GAATGACTTAGGCTTACCGT+AGG | - | chr5.2:59416113-59416132 | None:intergenic | 45.0% | |
| GACATGCGGAGACAGTAAAA+CGG | - | chr5.2:59417435-59417454 | None:intergenic | 45.0% | |
| GACCCTGTAAATGACACAGA+AGG | - | chr5.2:59417708-59417727 | None:intergenic | 45.0% | |
| GACTGATGGTTGTGATGTTC+GGG | - | chr5.2:59418413-59418432 | None:intergenic | 45.0% | |
| GATATGCGTCACTTAGAAGC+TGG | + | chr5.2:59417958-59417977 | MS.gene44895:CDS | 45.0% | |
| GCTAAGACATGCCATTCCTA+CGG | + | chr5.2:59416094-59416113 | MS.gene44895:CDS | 45.0% | |
| GGAAAAGCTGAGAAGAAACG+TGG | + | chr5.2:59419164-59419183 | MS.gene44895:CDS | 45.0% | |
| GGACTGATGGTTGTGATGTT+CGG | - | chr5.2:59418414-59418433 | None:intergenic | 45.0% | |
| GGATGTTATTCTTCGTAGGG+TGG | - | chr5.2:59416705-59416724 | None:intergenic | 45.0% | |
| GGGGAAAAAGCCTGTAAACA+CGG | + | chr5.2:59415141-59415160 | MS.gene44895:intron | 45.0% | |
| GTCTCCTATGATCAATAGCC+TGG | - | chr5.2:59416560-59416579 | None:intergenic | 45.0% | |
| GTGATGATATCCTGGCAACT+GGG | + | chr5.2:59418454-59418473 | MS.gene44895:CDS | 45.0% | |
| TAACAACACGCTTGTGCTCA+AGG | - | chr5.2:59417999-59418018 | None:intergenic | 45.0% | |
| TAACCTTATCTCCCGACAAC+AGG | - | chr5.2:59416726-59416745 | None:intergenic | 45.0% | |
| TAAGAAGCCTGGTCATGAAG+CGG | + | chr5.2:59414787-59414806 | MS.gene44895:CDS | 45.0% | |
| TAGGAATGGCATGTCTTAGC+TGG | - | chr5.2:59416094-59416113 | None:intergenic | 45.0% | |
| TATGTCCCACCACTTTGTGT+AGG | - | chr5.2:59418702-59418721 | None:intergenic | 45.0% | |
| TCATTTACAGGGTCGACATG+CGG | + | chr5.2:59417714-59417733 | MS.gene44895:intron | 45.0% | |
| TGAACCTGAATCCTGATGGA+TGG | + | chr5.2:59417135-59417154 | MS.gene44895:CDS | 45.0% | |
| TGATAACAGCGCAACTCACT+TGG | - | chr5.2:59416648-59416667 | None:intergenic | 45.0% | |
| TGTAAACACGGATGTAGACG+TGG | + | chr5.2:59415153-59415172 | MS.gene44895:intron | 45.0% | |
| ! | CCATCAGGATTCAGGTTCAT+CGG | - | chr5.2:59417134-59417153 | None:intergenic | 45.0% |
| ! | GGTTTAGAGGTTTTTCTGCG+GGG | - | chr5.2:59416050-59416069 | None:intergenic | 45.0% |
| ! | GTGAATCTAGGATAGTGTGG+CGG | - | chr5.2:59415443-59415462 | None:intergenic | 45.0% |
| ! | TGGATCCCATTCAGCTTTGA+AGG | - | chr5.2:59418172-59418191 | None:intergenic | 45.0% |
| !! | GGATCCCATTCAGCTTTGAA+GGG | - | chr5.2:59418171-59418190 | None:intergenic | 45.0% |
| !! | TACTGAGCATGGTGTTGTTC+CGG | + | chr5.2:59416022-59416041 | MS.gene44895:CDS | 45.0% |
| !! | TGAAGAAGAAGAAGCACTCG+AGG | + | chr5.2:59414533-59414552 | MS.gene44895:CDS | 45.0% |
| !! | TGGAGTCTGGGATTTTGAGA+AGG | + | chr5.2:59416851-59416870 | MS.gene44895:CDS | 45.0% |
| !!! | CCAGACATCCTTTTGACTTG+TGG | + | chr5.2:59417818-59417837 | MS.gene44895:CDS | 45.0% |
| !!! | GGATTTTGGCTTCTTGAGCT+TGG | - | chr5.2:59419240-59419259 | None:intergenic | 45.0% |
| AAGAAGCCTGGTCATGAAGC+GGG | + | chr5.2:59414788-59414807 | MS.gene44895:CDS | 50.0% | |
| ATTGTCTCGCTGCTCGACAA+AGG | + | chr5.2:59419277-59419296 | MS.gene44895:CDS | 50.0% | |
| CAATCTGTGAGTCGACTGTG+TGG | + | chr5.2:59415277-59415296 | MS.gene44895:intron | 50.0% | |
| CATCCTGTTGTCGGGAGATA+AGG | + | chr5.2:59416720-59416739 | MS.gene44895:CDS | 50.0% | |
| CATGCCATCCATCAGGATTC+AGG | - | chr5.2:59417142-59417161 | None:intergenic | 50.0% | |
| CCGATGAACCTGAATCCTGA+TGG | + | chr5.2:59417131-59417150 | MS.gene44895:CDS | 50.0% | |
| CGTGATGATATCCTGGCAAC+TGG | + | chr5.2:59418453-59418472 | MS.gene44895:CDS | 50.0% | |
| CTTGTGCTCAAGGCTACAGA+GGG | - | chr5.2:59417989-59418008 | None:intergenic | 50.0% | |
| GTCTATTCCGCATCCTCAGA+TGG | + | chr5.2:59417065-59417084 | MS.gene44895:CDS | 50.0% | |
| TCGACATGCGGTCCAATCAT+AGG | + | chr5.2:59417726-59417745 | MS.gene44895:CDS | 50.0% | |
| TTGAAACCCGCTTCATGACC+AGG | - | chr5.2:59414797-59414816 | None:intergenic | 50.0% | |
| TTTACTAGGGGCCAAACACC+TGG | + | chr5.2:59417306-59417325 | MS.gene44895:intron | 50.0% | |
| ! | AGGATTCAGGTTCATCGGAG+AGG | - | chr5.2:59417129-59417148 | None:intergenic | 50.0% |
| ! | GGAAAAATCTGAGACGGTCG+AGG | + | chr5.2:59419112-59419131 | MS.gene44895:CDS | 50.0% |
| ! | GGTCATGAAGCGGGTTTCAA+GGG | + | chr5.2:59414797-59414816 | MS.gene44895:CDS | 50.0% |
| ! | TGAGAAAGGTCTTGTGCTCG+TGG | + | chr5.2:59417358-59417377 | MS.gene44895:CDS | 50.0% |
| ! | TGGTCATGAAGCGGGTTTCA+AGG | + | chr5.2:59414796-59414815 | MS.gene44895:CDS | 50.0% |
| !! | AGAAGAAGAAGCACTCGAGG+AGG | + | chr5.2:59414536-59414555 | MS.gene44895:CDS | 50.0% |
| !! | GCAGTTGGTAGCAGAAGTCA+TGG | + | chr5.2:59418386-59418405 | MS.gene44895:CDS | 50.0% |
| ACAGCGCAACTCACTTGGTC+TGG | - | chr5.2:59416643-59416662 | None:intergenic | 55.0% | |
| ACCTAGAACTCCCAGTTGCC+AGG | - | chr5.2:59418467-59418486 | None:intergenic | 55.0% | |
| ACGGATGTAGACGTGGACAC+CGG | + | chr5.2:59415160-59415179 | MS.gene44895:intron | 55.0% | |
| CATCGGGTCACTACTGAGCA+TGG | + | chr5.2:59416011-59416030 | MS.gene44895:CDS | 55.0% | |
| GCTTGTGCTCAAGGCTACAG+AGG | - | chr5.2:59417990-59418009 | None:intergenic | 55.0% | |
| GTGCTCGTGGCCGATAACTT+TGG | + | chr5.2:59417371-59417390 | MS.gene44895:CDS | 55.0% | |
| TCCTGGCAACTGGGAGTTCT+AGG | + | chr5.2:59418463-59418482 | MS.gene44895:CDS | 55.0% | |
| TGCTCAGTAGTGACCCGATG+TGG | - | chr5.2:59416011-59416030 | None:intergenic | 55.0% | |
| ! | ATCTGAGACGGTCGAGGAGA+AGG | + | chr5.2:59419118-59419137 | MS.gene44895:CDS | 55.0% |
| TGACCTTGAGGAGACTCGCG+CGG | - | chr5.2:59417229-59417248 | None:intergenic | 60.0% | |
| ! | GAGGTTTTTCTGCGGGGTGC+CGG | - | chr5.2:59416044-59416063 | None:intergenic | 60.0% |
| TGACCGCGCGAGTCTCCTCA+AGG | + | chr5.2:59417223-59417242 | MS.gene44895:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 59414453 | 59419310 | 59414453 | ID=MS.gene44895 |
| chr5.2 | mRNA | 59414453 | 59419310 | 59414453 | ID=MS.gene44895.t1;Parent=MS.gene44895 |
| chr5.2 | exon | 59414453 | 59414680 | 59414453 | ID=MS.gene44895.t1.exon1;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59414453 | 59414680 | 59414453 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59414782 | 59414872 | 59414782 | ID=MS.gene44895.t1.exon2;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59414782 | 59414872 | 59414782 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59415988 | 59416115 | 59415988 | ID=MS.gene44895.t1.exon3;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59415988 | 59416115 | 59415988 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59416619 | 59416741 | 59416619 | ID=MS.gene44895.t1.exon4;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59416619 | 59416741 | 59416619 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59416840 | 59416928 | 59416840 | ID=MS.gene44895.t1.exon5;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59416840 | 59416928 | 59416840 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59417040 | 59417160 | 59417040 | ID=MS.gene44895.t1.exon6;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59417040 | 59417160 | 59417040 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59417314 | 59417405 | 59417314 | ID=MS.gene44895.t1.exon7;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59417314 | 59417405 | 59417314 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59417724 | 59417853 | 59417724 | ID=MS.gene44895.t1.exon8;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59417724 | 59417853 | 59417724 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59417946 | 59418194 | 59417946 | ID=MS.gene44895.t1.exon9;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59417946 | 59418194 | 59417946 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59418288 | 59418484 | 59418288 | ID=MS.gene44895.t1.exon10;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59418288 | 59418484 | 59418288 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| chr5.2 | exon | 59419088 | 59419310 | 59419088 | ID=MS.gene44895.t1.exon11;Parent=MS.gene44895.t1 |
| chr5.2 | CDS | 59419088 | 59419310 | 59419088 | ID=cds.MS.gene44895.t1;Parent=MS.gene44895.t1 |
| Gene Sequence |
| Protein sequence |
