Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45016.t1 | XP_019437634.1 | 35.4 | 489 | 281 | 8 | 6 | 464 | 3 | 486 | 3.00E-84 | 322.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45016.t1 | A0A392M5M3 | 46.8 | 357 | 169 | 2 | 3 | 359 | 35 | 370 | 6.0e-87 | 331.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054559 | MS.gene45016 | 0.811865 | 5.65E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45016.t1 | MTR_3g055660 | 34.553 | 492 | 291 | 6 | 6 | 467 | 28 | 518 | 3.71e-106 | 328 |
| MS.gene45016.t1 | MTR_4g014890 | 34.221 | 488 | 269 | 6 | 6 | 467 | 28 | 489 | 6.09e-103 | 319 |
| MS.gene45016.t1 | MTR_4g085760 | 34.799 | 523 | 297 | 7 | 2 | 482 | 3 | 523 | 4.87e-101 | 315 |
| MS.gene45016.t1 | MTR_6g059860 | 32.661 | 496 | 295 | 7 | 6 | 469 | 22 | 510 | 2.74e-99 | 310 |
| MS.gene45016.t1 | MTR_5g004860 | 32.990 | 485 | 288 | 8 | 8 | 459 | 3 | 483 | 3.38e-83 | 268 |
| MS.gene45016.t1 | MTR_2g450060 | 32.179 | 491 | 293 | 8 | 6 | 459 | 5 | 492 | 8.42e-77 | 252 |
| MS.gene45016.t1 | MTR_1g062890 | 35.817 | 416 | 216 | 5 | 5 | 419 | 21 | 386 | 1.80e-73 | 238 |
| MS.gene45016.t1 | MTR_5g053590 | 29.295 | 553 | 307 | 12 | 6 | 511 | 1 | 516 | 8.96e-70 | 233 |
| MS.gene45016.t1 | MTR_6g464080 | 29.139 | 453 | 293 | 8 | 6 | 433 | 1 | 450 | 1.38e-62 | 214 |
| MS.gene45016.t1 | MTR_1g043690 | 30.285 | 492 | 279 | 11 | 8 | 459 | 10 | 477 | 8.36e-57 | 200 |
| MS.gene45016.t1 | MTR_8g076570 | 29.452 | 438 | 282 | 7 | 6 | 419 | 1 | 435 | 9.68e-57 | 203 |
| MS.gene45016.t1 | MTR_0003s0290 | 27.189 | 434 | 239 | 8 | 6 | 414 | 1 | 382 | 6.68e-50 | 178 |
| MS.gene45016.t1 | MTR_5g041170 | 31.099 | 373 | 215 | 7 | 124 | 459 | 21 | 388 | 5.85e-49 | 175 |
| MS.gene45016.t1 | MTR_8g027910 | 32.000 | 250 | 163 | 3 | 6 | 250 | 11 | 258 | 1.28e-41 | 150 |
| MS.gene45016.t1 | MTR_2g060880 | 28.058 | 417 | 259 | 10 | 27 | 419 | 52 | 451 | 4.40e-40 | 152 |
| MS.gene45016.t1 | MTR_6g055250 | 31.507 | 292 | 175 | 4 | 46 | 313 | 1 | 291 | 7.27e-40 | 149 |
| MS.gene45016.t1 | MTR_2g055290 | 33.493 | 209 | 112 | 3 | 6 | 213 | 1 | 183 | 1.19e-37 | 137 |
| MS.gene45016.t1 | MTR_7g025160 | 33.175 | 211 | 135 | 2 | 5 | 210 | 10 | 219 | 4.90e-36 | 135 |
| MS.gene45016.t1 | MTR_7g450880 | 29.643 | 280 | 170 | 4 | 117 | 370 | 15 | 293 | 4.28e-33 | 128 |
| MS.gene45016.t1 | MTR_7g110100 | 23.745 | 518 | 345 | 13 | 24 | 511 | 19 | 516 | 3.53e-32 | 130 |
| MS.gene45016.t1 | MTR_8g077490 | 40.940 | 149 | 77 | 2 | 8 | 149 | 51 | 195 | 1.71e-29 | 116 |
| MS.gene45016.t1 | MTR_1g105785 | 22.535 | 497 | 336 | 14 | 24 | 480 | 19 | 506 | 2.71e-28 | 119 |
| MS.gene45016.t1 | MTR_1g092930 | 40.164 | 122 | 73 | 0 | 9 | 130 | 4 | 125 | 4.60e-26 | 110 |
| MS.gene45016.t1 | MTR_7g052740 | 28.936 | 235 | 145 | 5 | 17 | 249 | 83 | 297 | 2.85e-25 | 107 |
| MS.gene45016.t1 | MTR_4g036240 | 25.508 | 443 | 287 | 14 | 10 | 420 | 5 | 436 | 8.52e-25 | 108 |
| MS.gene45016.t1 | MTR_6g045290 | 32.919 | 161 | 105 | 2 | 50 | 208 | 302 | 461 | 7.84e-24 | 104 |
| MS.gene45016.t1 | MTR_5g064590 | 25.911 | 247 | 124 | 5 | 6 | 250 | 1 | 190 | 2.25e-23 | 100 |
| MS.gene45016.t1 | MTR_2g048560 | 24.466 | 421 | 268 | 13 | 10 | 387 | 5 | 418 | 3.91e-23 | 103 |
| MS.gene45016.t1 | MTR_2g055900 | 32.143 | 168 | 93 | 3 | 112 | 263 | 54 | 216 | 5.41e-23 | 98.6 |
| MS.gene45016.t1 | MTR_3g452170 | 22.154 | 325 | 224 | 6 | 24 | 323 | 19 | 339 | 6.87e-22 | 99.0 |
| MS.gene45016.t1 | MTR_1g092990 | 36.508 | 126 | 79 | 1 | 6 | 130 | 1 | 126 | 1.04e-21 | 97.4 |
| MS.gene45016.t1 | MTR_4g070160 | 31.250 | 176 | 118 | 2 | 65 | 238 | 2 | 176 | 2.09e-21 | 93.2 |
| MS.gene45016.t1 | MTR_1g041830 | 39.823 | 113 | 67 | 1 | 6 | 118 | 3 | 114 | 2.50e-21 | 89.7 |
| MS.gene45016.t1 | MTR_8g076180 | 30.189 | 159 | 93 | 2 | 6 | 164 | 1 | 141 | 4.55e-21 | 92.8 |
| MS.gene45016.t1 | MTR_6g477950 | 35.036 | 137 | 87 | 2 | 6 | 141 | 180 | 315 | 4.94e-20 | 91.3 |
| MS.gene45016.t1 | MTR_6g477970 | 32.353 | 136 | 91 | 1 | 6 | 141 | 1 | 135 | 1.03e-19 | 85.9 |
| MS.gene45016.t1 | MTR_5g078250 | 22.371 | 523 | 355 | 19 | 6 | 488 | 1 | 512 | 5.20e-19 | 90.5 |
| MS.gene45016.t1 | MTR_1g052715 | 25.121 | 207 | 148 | 4 | 44 | 246 | 1 | 204 | 7.07e-19 | 88.2 |
| MS.gene45016.t1 | MTR_7g051400 | 20.487 | 493 | 329 | 12 | 24 | 480 | 19 | 484 | 1.12e-17 | 86.3 |
| MS.gene45016.t1 | MTR_1g093010 | 33.600 | 125 | 61 | 1 | 6 | 130 | 1 | 103 | 1.36e-17 | 84.7 |
| MS.gene45016.t1 | MTR_8g062030 | 22.637 | 402 | 270 | 13 | 6 | 378 | 1 | 390 | 3.31e-17 | 85.1 |
| MS.gene45016.t1 | MTR_7g024060 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_6g087820 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_5g081190 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_5g091480 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_5g056290 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_3g031190 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_2g005490 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_2g010570 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 7.70e-17 | 82.0 |
| MS.gene45016.t1 | MTR_5g030110 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 8.53e-17 | 82.0 |
| MS.gene45016.t1 | MTR_2g007410 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 8.53e-17 | 82.0 |
| MS.gene45016.t1 | MTR_1g023370 | 25.000 | 244 | 168 | 7 | 10 | 244 | 5 | 242 | 2.69e-16 | 80.1 |
| MS.gene45016.t1 | MTR_8g077280 | 26.380 | 163 | 109 | 2 | 156 | 318 | 4 | 155 | 3.70e-16 | 79.7 |
| MS.gene45016.t1 | MTR_7g074180 | 25.101 | 247 | 170 | 7 | 10 | 247 | 5 | 245 | 4.15e-16 | 79.7 |
| MS.gene45016.t1 | MTR_8g446640 | 26.522 | 230 | 154 | 7 | 27 | 247 | 3 | 226 | 5.09e-16 | 79.3 |
| MS.gene45016.t1 | MTR_1g011320 | 28.440 | 218 | 145 | 5 | 50 | 256 | 57 | 274 | 7.17e-16 | 78.6 |
| MS.gene45016.t1 | MTR_3g056270 | 23.832 | 428 | 270 | 15 | 30 | 420 | 187 | 595 | 1.23e-15 | 80.5 |
| MS.gene45016.t1 | MTR_7g451880 | 24.696 | 247 | 171 | 7 | 10 | 247 | 6 | 246 | 1.50e-15 | 78.2 |
| MS.gene45016.t1 | MTR_4g058660 | 24.696 | 247 | 171 | 7 | 10 | 247 | 5 | 245 | 1.58e-15 | 78.2 |
| MS.gene45016.t1 | MTR_0048s0080 | 23.596 | 267 | 168 | 7 | 141 | 387 | 4 | 254 | 5.17e-15 | 76.6 |
| MS.gene45016.t1 | MTR_1g082860 | 25.431 | 232 | 155 | 6 | 10 | 235 | 5 | 224 | 1.05e-14 | 74.7 |
| MS.gene45016.t1 | MTR_3g044760 | 25.514 | 243 | 164 | 8 | 9 | 245 | 4 | 235 | 1.35e-14 | 76.3 |
| MS.gene45016.t1 | MTR_1g011490 | 23.790 | 248 | 171 | 6 | 6 | 247 | 1 | 236 | 2.10e-14 | 74.7 |
| MS.gene45016.t1 | MTR_8g463820 | 21.603 | 287 | 185 | 6 | 11 | 286 | 6 | 263 | 6.77e-14 | 72.8 |
| MS.gene45016.t1 | MTR_2g008650 | 23.607 | 377 | 248 | 14 | 10 | 355 | 7 | 374 | 1.27e-13 | 73.9 |
| MS.gene45016.t1 | MTR_8g479260 | 23.607 | 377 | 248 | 14 | 10 | 355 | 7 | 374 | 1.30e-13 | 73.6 |
| MS.gene45016.t1 | MTR_4g036240 | 26.126 | 333 | 206 | 13 | 117 | 420 | 35 | 356 | 1.31e-13 | 73.6 |
| MS.gene45016.t1 | MTR_6g039240 | 21.404 | 285 | 184 | 6 | 13 | 286 | 8 | 263 | 2.05e-13 | 71.2 |
| MS.gene45016.t1 | MTR_3g015660 | 24.066 | 241 | 168 | 7 | 10 | 241 | 5 | 239 | 6.97e-13 | 68.9 |
| MS.gene45016.t1 | MTR_5g027390 | 23.656 | 372 | 253 | 14 | 60 | 406 | 47 | 412 | 7.20e-13 | 71.2 |
| MS.gene45016.t1 | MTR_4g037530 | 36.047 | 86 | 55 | 0 | 7 | 92 | 77 | 162 | 2.14e-12 | 65.9 |
| MS.gene45016.t1 | MTR_1g094230 | 22.541 | 244 | 156 | 5 | 13 | 245 | 8 | 229 | 3.88e-12 | 67.8 |
| MS.gene45016.t1 | MTR_8g469790 | 28.090 | 178 | 116 | 4 | 220 | 386 | 366 | 542 | 5.08e-12 | 68.6 |
| MS.gene45016.t1 | MTR_3g082920 | 37.255 | 102 | 57 | 2 | 318 | 419 | 223 | 317 | 5.49e-12 | 68.2 |
| MS.gene45016.t1 | MTR_5g045850 | 22.881 | 236 | 155 | 6 | 10 | 241 | 5 | 217 | 2.25e-11 | 65.1 |
| MS.gene45016.t1 | MTR_8g088810 | 24.898 | 245 | 164 | 5 | 11 | 244 | 6 | 241 | 4.29e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45016.t1 | AT1G52950 | 20.537 | 521 | 353 | 17 | 9 | 489 | 6 | 505 | 2.71e-14 | 75.9 |
Find 92 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGAATCATATGCAATTT+TGG | 0.149359 | 6.3:-68526978 | None:intergenic |
| TATTCAAAAGTTCAATTATT+TGG | 0.155932 | 6.3:-68527574 | None:intergenic |
| TAAAACAAATTACATGTTTC+AGG | 0.168129 | 6.3:-68526159 | None:intergenic |
| TGAATTTAACTATGGTATTC+AGG | 0.222386 | 6.3:+68526771 | MS.gene45016:CDS |
| ATCTTGATTGGTAATGATTC+TGG | 0.224355 | 6.3:-68526044 | None:intergenic |
| CTTTCTTATAACTATTTGTT+TGG | 0.227343 | 6.3:-68525634 | None:intergenic |
| AGAAGAGAAAGACGACAAAT+TGG | 0.259503 | 6.3:+68527541 | MS.gene45016:CDS |
| TCAAGATTTGTGTTCTTTGA+TGG | 0.266778 | 6.3:+68526537 | MS.gene45016:CDS |
| CTTTAGTTGACCATCTAATA+TGG | 0.272042 | 6.3:-68526353 | None:intergenic |
| ATTATATCATAATAGGTATA+AGG | 0.281552 | 6.3:+68526482 | MS.gene45016:intron |
| TTTCAGTGTGCCTCCGTAAT+AGG | 0.307375 | 6.3:+68525484 | MS.gene45016:CDS |
| ATCTAATATGGAAACCCTTT+TGG | 0.309300 | 6.3:-68526341 | None:intergenic |
| TACCTCTTCTTTCAGCAGTT+TGG | 0.316560 | 6.3:-68526873 | None:intergenic |
| AAAGTAAACTGTTACGTTCA+TGG | 0.327848 | 6.3:-68524947 | None:intergenic |
| GGTCAACTAAAGTGTGAAAA+TGG | 0.334869 | 6.3:+68526364 | MS.gene45016:CDS |
| GATTTCTTGTAAATCTTGAT+TGG | 0.336200 | 6.3:-68526056 | None:intergenic |
| CGAATACAACTCCTGCAAAA+AGG | 0.341351 | 6.3:+68527156 | MS.gene45016:CDS |
| AAAGCTGTTGAATTTAACTA+TGG | 0.346330 | 6.3:+68526763 | MS.gene45016:CDS |
| GGAGATTGCACCCAACTCTT+AGG | 0.352782 | 6.3:+68526558 | MS.gene45016:CDS |
| GGTTCATAATAATGATCTTC+AGG | 0.355520 | 6.3:+68525333 | MS.gene45016:CDS |
| AGCAAATTTCCAAGTTTCCT+TGG | 0.365495 | 6.3:-68525061 | None:intergenic |
| TCTGTTGTCTTAGACATCAT+TGG | 0.368681 | 6.3:+68525587 | MS.gene45016:intron |
| TAATAATGATCTTCAGGTTA+AGG | 0.374306 | 6.3:+68525339 | MS.gene45016:CDS |
| AAAATAACTATAAGTTGCTT+TGG | 0.376953 | 6.3:+68525368 | MS.gene45016:CDS |
| TTCCTAATAATGAAAACAAA+AGG | 0.390279 | 6.3:-68525859 | None:intergenic |
| TTTCTTATAACTATTTGTTT+GGG | 0.392383 | 6.3:-68525633 | None:intergenic |
| CTACTGAATATGTCTCTTCC+TGG | 0.399491 | 6.3:+68525263 | MS.gene45016:CDS |
| CTATGGTATTCAGGGTGAAA+TGG | 0.399785 | 6.3:+68526780 | MS.gene45016:CDS |
| AGATCTTCTAATGAGTCAAA+TGG | 0.408809 | 6.3:-68525030 | None:intergenic |
| GTTTCAGGGCATTGATTTGT+GGG | 0.419434 | 6.3:-68526144 | None:intergenic |
| CGCAGTTTGATCAATCAGAC+AGG | 0.421409 | 6.3:+68525826 | MS.gene45016:CDS |
| GTTGTATTCGAACCGTTCTC+TGG | 0.422594 | 6.3:-68527143 | None:intergenic |
| AAAAGGGTTTCCATATTAGA+TGG | 0.424805 | 6.3:+68526343 | MS.gene45016:CDS |
| GGACTGCTCGTAACAAGAAT+GGG | 0.442165 | 6.3:+68525103 | MS.gene45016:CDS |
| GAATTTAACTATGGTATTCA+GGG | 0.446826 | 6.3:+68526772 | MS.gene45016:CDS |
| GAAGAGAAAGACGACAAATT+GGG | 0.448380 | 6.3:+68527542 | MS.gene45016:CDS |
| CTAACAAGGTGGTTACTTCA+AGG | 0.457608 | 6.3:+68526284 | MS.gene45016:CDS |
| AACTATAAGTTGCTTTGGAC+TGG | 0.459246 | 6.3:+68525373 | MS.gene45016:CDS |
| CTATGAAATGAACAACTTCA+AGG | 0.461461 | 6.3:+68525312 | MS.gene45016:CDS |
| GAATCTCCGCATCAGACCTT+AGG | 0.461947 | 6.3:+68526580 | MS.gene45016:CDS |
| TAAATGATTCCAAGGAAACT+TGG | 0.462013 | 6.3:+68525052 | MS.gene45016:CDS |
| TGTTTCAGGGCATTGATTTG+TGG | 0.466335 | 6.3:-68526145 | None:intergenic |
| GCAGCCATTCAGCCTGCAAC+TGG | 0.474310 | 6.3:+68525883 | MS.gene45016:CDS |
| GATGTTACATGTGCACCAAA+AGG | 0.482352 | 6.3:+68526326 | MS.gene45016:CDS |
| TGGACTGCTCGTAACAAGAA+TGG | 0.484557 | 6.3:+68525102 | MS.gene45016:CDS |
| AAAACAAATTACATGTTTCA+GGG | 0.489492 | 6.3:-68526158 | None:intergenic |
| GATCTTCTAATGAGTCAAAT+GGG | 0.496841 | 6.3:-68525029 | None:intergenic |
| TGCGGAGATTCCTAAGAGTT+GGG | 0.506253 | 6.3:-68526568 | None:intergenic |
| TCAAAACAAGTTCTGTAATG+AGG | 0.507269 | 6.3:+68526813 | MS.gene45016:CDS |
| TTCTTTCAGATCATCTCTCC+AGG | 0.507819 | 6.3:-68525281 | None:intergenic |
| ATGCGGAGATTCCTAAGAGT+TGG | 0.512700 | 6.3:-68526569 | None:intergenic |
| TATACCAGTTGCAGGCTGAA+TGG | 0.512959 | 6.3:-68525887 | None:intergenic |
| AAGACGACAAATTGGGAAGA+AGG | 0.515939 | 6.3:+68527549 | MS.gene45016:CDS |
| GCATATTCAAATGGTCGTAA+TGG | 0.517451 | 6.3:+68525131 | MS.gene45016:CDS |
| TGTTAAAACAGAAACATATC+CGG | 0.524109 | 6.3:+68525994 | MS.gene45016:intron |
| CTTGCTGAACTGTACTTTGT+GGG | 0.532284 | 6.3:+68525783 | MS.gene45016:CDS |
| TCCTAATAATGAAAACAAAA+GGG | 0.536004 | 6.3:-68525858 | None:intergenic |
| ATGTTACATGTGCACCAAAA+GGG | 0.537046 | 6.3:+68526327 | MS.gene45016:CDS |
| CATGCATTTGTAACACATAC+CGG | 0.540734 | 6.3:-68526013 | None:intergenic |
| TTTCCTTTAGGCTTACTGGT+AGG | 0.542259 | 6.3:-68527450 | None:intergenic |
| GACTTTCCTTAGCTCAGTTG+AGG | 0.545834 | 6.3:+68526850 | MS.gene45016:CDS |
| CGGTATGTGTTACAAATGCA+TGG | 0.549973 | 6.3:+68526014 | MS.gene45016:CDS |
| AGAAGATCTAAATGATTCCA+AGG | 0.550217 | 6.3:+68525044 | MS.gene45016:CDS |
| ACTTGCTGAACTGTACTTTG+TGG | 0.551094 | 6.3:+68525782 | MS.gene45016:CDS |
| AATGGTCGTAATGGATGCTA+AGG | 0.552374 | 6.3:+68525140 | MS.gene45016:CDS |
| ACTCCTACCAGTAAGCCTAA+AGG | 0.569217 | 6.3:+68527447 | MS.gene45016:CDS |
| CAGGAAGAGACATATTCAGT+AGG | 0.569651 | 6.3:-68525262 | None:intergenic |
| GAGTAGGTTCATTATTAACA+TGG | 0.574057 | 6.3:-68526387 | None:intergenic |
| TGGTTACTTCAAGGAGTGGA+TGG | 0.574776 | 6.3:+68526293 | MS.gene45016:CDS |
| GTTAGTGAGGACCTTGGAGT+AGG | 0.576764 | 6.3:-68526403 | None:intergenic |
| TTAACAACAGGATGAAGACT+TGG | 0.577861 | 6.3:+68525002 | MS.gene45016:intron |
| TCATACTCAGTTGTAGCAGA+GGG | 0.585788 | 6.3:-68527119 | None:intergenic |
| CTGTACGAATTGTTAATCTG+TGG | 0.592800 | 6.3:+68525082 | MS.gene45016:CDS |
| GTTTGGCCTCAACTGAGCTA+AGG | 0.593331 | 6.3:-68526856 | None:intergenic |
| AGGAAGAGACATATTCAGTA+GGG | 0.595199 | 6.3:-68525261 | None:intergenic |
| ATATCATAATAGGTATAAGG+TGG | 0.620199 | 6.3:+68526485 | MS.gene45016:intron |
| ATCATACTCAGTTGTAGCAG+AGG | 0.622170 | 6.3:-68527120 | None:intergenic |
| TTAATAATGAACCTACTCCA+AGG | 0.622337 | 6.3:+68526392 | MS.gene45016:CDS |
| GCAGTTTGATCAATCAGACA+GGG | 0.624463 | 6.3:+68525827 | MS.gene45016:CDS |
| AAGGTGGTTACTTCAAGGAG+TGG | 0.630951 | 6.3:+68526289 | MS.gene45016:CDS |
| GACTGCTCGTAACAAGAATG+GGG | 0.646433 | 6.3:+68525104 | MS.gene45016:CDS |
| GGCCAAACTGCTGAAAGAAG+AGG | 0.648879 | 6.3:+68526871 | MS.gene45016:CDS |
| ACTGAGTATGATCCAGAGAA+CGG | 0.653132 | 6.3:+68527131 | MS.gene45016:CDS |
| GCAATCACAGAATGATCATG+TGG | 0.663477 | 6.3:+68527003 | MS.gene45016:CDS |
| TGTGTTACAAATGCATGGAG+TGG | 0.666360 | 6.3:+68526019 | MS.gene45016:CDS |
| TAAGAATAAATTCTCTAACG+AGG | 0.670613 | 6.3:+68526087 | MS.gene45016:CDS |
| AGGAGTGGATGGACTTACGA+TGG | 0.677193 | 6.3:+68526304 | MS.gene45016:CDS |
| AATTTATCATGAGAGACACT+AGG | 0.685720 | 6.3:+68525666 | MS.gene45016:CDS |
| CAGTTTGATCAATCAGACAG+GGG | 0.688711 | 6.3:+68525828 | MS.gene45016:CDS |
| AGTTTGATCAATCAGACAGG+GGG | 0.694611 | 6.3:+68525829 | MS.gene45016:CDS |
| ACTGCTCGTAACAAGAATGG+GGG | 0.722412 | 6.3:+68525105 | MS.gene45016:CDS |
| CATACTCAGTTGTAGCAGAG+GGG | 0.734257 | 6.3:-68527118 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACAGAATATATTTA+AGG | - | chr6.3:68526462-68526481 | None:intergenic | 10.0% |
| !! | AAAAAACAGAATATATTTAA+GGG | - | chr6.3:68526461-68526480 | None:intergenic | 10.0% |
| !! | ATAAAAATACAATTTAAACA+TGG | - | chr6.3:68525181-68525200 | None:intergenic | 10.0% |
| !! | TTAATTAATGTATTTAATCA+TGG | - | chr6.3:68526640-68526659 | None:intergenic | 10.0% |
| !!! | ATAAAATTTTATACCTATTA+CGG | - | chr6.3:68525500-68525519 | None:intergenic | 10.0% |
| !! | AAAAACAGAATATATTTAAG+GGG | - | chr6.3:68526460-68526479 | None:intergenic | 15.0% |
| !! | AACATTAACATCTTATTAAA+TGG | + | chr6.3:68525705-68525724 | MS.gene45016:intron | 15.0% |
| !! | AAGTTTACTTTACATTTATT+TGG | + | chr6.3:68525933-68525952 | MS.gene45016:intron | 15.0% |
| !! | AATTAAAGAATGTAGTTAAA+TGG | - | chr6.3:68526428-68526447 | None:intergenic | 15.0% |
| !! | ATTATATCATAATAGGTATA+AGG | + | chr6.3:68526482-68526501 | MS.gene45016:intron | 15.0% |
| !! | TTTCTTATAACTATTTGTTT+GGG | - | chr6.3:68525636-68525655 | None:intergenic | 15.0% |
| !!! | ACTATTTTTTTTCAATTCAT+AGG | + | chr6.3:68527398-68527417 | MS.gene45016:intron | 15.0% |
| !!! | TTTTATATCATATTTGAAGT+GGG | + | chr6.3:68525758-68525777 | MS.gene45016:intron | 15.0% |
| !!! | TTTTTATATCATATTTGAAG+TGG | + | chr6.3:68525757-68525776 | MS.gene45016:intron | 15.0% |
| !! | AAAACAAATTACATGTTTCA+GGG | - | chr6.3:68526161-68526180 | None:intergenic | 20.0% |
| !! | AAAATAACTATAAGTTGCTT+TGG | + | chr6.3:68525368-68525387 | MS.gene45016:CDS | 20.0% |
| !! | AAATACAATTTAAACATGGA+AGG | - | chr6.3:68525177-68525196 | None:intergenic | 20.0% |
| !! | AAGAATTAGTTAAGGATAAA+TGG | + | chr6.3:68527326-68527345 | MS.gene45016:intron | 20.0% |
| !! | AATTCAATATCCAATACTAT+TGG | + | chr6.3:68526670-68526689 | MS.gene45016:intron | 20.0% |
| !! | ATAGACATACAATTATATGA+TGG | - | chr6.3:68525211-68525230 | None:intergenic | 20.0% |
| !! | ATATGGAATAAATTAACAAC+AGG | + | chr6.3:68524990-68525009 | MS.gene45016:intron | 20.0% |
| !! | CTTTCTTATAACTATTTGTT+TGG | - | chr6.3:68525637-68525656 | None:intergenic | 20.0% |
| !! | TAAAACAAATTACATGTTTC+AGG | - | chr6.3:68526162-68526181 | None:intergenic | 20.0% |
| !! | TCCTAATAATGAAAACAAAA+GGG | - | chr6.3:68525861-68525880 | None:intergenic | 20.0% |
| !! | TTCCTAATAATGAAAACAAA+AGG | - | chr6.3:68525862-68525881 | None:intergenic | 20.0% |
| !!! | AATTGTATGTCTATCTTTTA+GGG | + | chr6.3:68525217-68525236 | MS.gene45016:intron | 20.0% |
| !!! | AGTTTCTAAAAAGTACAAAT+AGG | - | chr6.3:68525960-68525979 | None:intergenic | 20.0% |
| !!! | ATTTTAATAAGTGCACATTT+AGG | - | chr6.3:68527068-68527087 | None:intergenic | 20.0% |
| !!! | TAATTGTATGTCTATCTTTT+AGG | + | chr6.3:68525216-68525235 | MS.gene45016:intron | 20.0% |
| ! | AAAAAAATTATACCAGTTGC+AGG | - | chr6.3:68525898-68525917 | None:intergenic | 25.0% |
| ! | AAAATCCTTGAAAAAGAAGT+GGG | - | chr6.3:68525443-68525462 | None:intergenic | 25.0% |
| ! | AAAGCTGTTGAATTTAACTA+TGG | + | chr6.3:68526763-68526782 | MS.gene45016:CDS | 25.0% |
| ! | AATGGAAAAATATGTGTCAA+AGG | - | chr6.3:68527267-68527286 | None:intergenic | 25.0% |
| ! | ATATCATAATAGGTATAAGG+TGG | + | chr6.3:68526485-68526504 | MS.gene45016:intron | 25.0% |
| ! | GAATTTAACTATGGTATTCA+GGG | + | chr6.3:68526772-68526791 | MS.gene45016:CDS | 25.0% |
| ! | GATTTCTTGTAAATCTTGAT+TGG | - | chr6.3:68526059-68526078 | None:intergenic | 25.0% |
| ! | TAAAATCCTTGAAAAAGAAG+TGG | - | chr6.3:68525444-68525463 | None:intergenic | 25.0% |
| ! | TAAGAATAAATTCTCTAACG+AGG | + | chr6.3:68526087-68526106 | MS.gene45016:CDS | 25.0% |
| ! | TAAGACAACAGAATATAGTT+AGG | - | chr6.3:68525579-68525598 | None:intergenic | 25.0% |
| ! | TGAATTTAACTATGGTATTC+AGG | + | chr6.3:68526771-68526790 | MS.gene45016:CDS | 25.0% |
| ! | TGTTAAAACAGAAACATATC+CGG | + | chr6.3:68525994-68526013 | MS.gene45016:intron | 25.0% |
| !! | AAATTTTATACCTATTACGG+AGG | - | chr6.3:68525497-68525516 | None:intergenic | 25.0% |
| !! | AAGAGAATCATATGCAATTT+TGG | - | chr6.3:68526981-68527000 | None:intergenic | 25.0% |
| !! | AGAGAATCATATGCAATTTT+GGG | - | chr6.3:68526980-68526999 | None:intergenic | 25.0% |
| !! | TAATAATGATCTTCAGGTTA+AGG | + | chr6.3:68525339-68525358 | MS.gene45016:CDS | 25.0% |
| !! | TTTTTATGACTGAACTCATA+TGG | + | chr6.3:68524973-68524992 | MS.gene45016:intron | 25.0% |
| !! | TTTTTCTCTTTTCAGATAAC+TGG | + | chr6.3:68526950-68526969 | MS.gene45016:intron | 25.0% |
| !!! | ACCCTTTTGTTTTCATTATT+AGG | + | chr6.3:68525857-68525876 | MS.gene45016:CDS | 25.0% |
| !!! | ATGCTCTAAAGAATTAGTTA+AGG | + | chr6.3:68527318-68527337 | MS.gene45016:intron | 25.0% |
| AAAAAGGTTGTCTTCAAAAG+AGG | + | chr6.3:68527172-68527191 | MS.gene45016:CDS | 30.0% | |
| AAAAGGGTTTCCATATTAGA+TGG | + | chr6.3:68526343-68526362 | MS.gene45016:CDS | 30.0% | |
| AAGGCTTAAACCAATAGTAT+TGG | - | chr6.3:68526683-68526702 | None:intergenic | 30.0% | |
| AATTTATCATGAGAGACACT+AGG | + | chr6.3:68525666-68525685 | MS.gene45016:CDS | 30.0% | |
| AGAAGATCTAAATGATTCCA+AGG | + | chr6.3:68525044-68525063 | MS.gene45016:CDS | 30.0% | |
| AGATCTTCTAATGAGTCAAA+TGG | - | chr6.3:68525033-68525052 | None:intergenic | 30.0% | |
| ATGTAGTTAAATGGTTAGTG+AGG | - | chr6.3:68526419-68526438 | None:intergenic | 30.0% | |
| CTATGAAATGAACAACTTCA+AGG | + | chr6.3:68525312-68525331 | MS.gene45016:CDS | 30.0% | |
| CTGCACAATAAAGCAAAATA+AGG | - | chr6.3:68526702-68526721 | None:intergenic | 30.0% | |
| CTTTAGTTGACCATCTAATA+TGG | - | chr6.3:68526356-68526375 | None:intergenic | 30.0% | |
| GAGTAGGTTCATTATTAACA+TGG | - | chr6.3:68526390-68526409 | None:intergenic | 30.0% | |
| GATCTTCTAATGAGTCAAAT+GGG | - | chr6.3:68525032-68525051 | None:intergenic | 30.0% | |
| GGTTCATAATAATGATCTTC+AGG | + | chr6.3:68525333-68525352 | MS.gene45016:CDS | 30.0% | |
| TAAATGATTCCAAGGAAACT+TGG | + | chr6.3:68525052-68525071 | MS.gene45016:CDS | 30.0% | |
| TCAAAACAAGTTCTGTAATG+AGG | + | chr6.3:68526813-68526832 | MS.gene45016:CDS | 30.0% | |
| TCAAGATTTGTGTTCTTTGA+TGG | + | chr6.3:68526537-68526556 | MS.gene45016:CDS | 30.0% | |
| TGCTTAATCAACTCTTGATA+TGG | + | chr6.3:68526908-68526927 | MS.gene45016:intron | 30.0% | |
| TTAATAATGAACCTACTCCA+AGG | + | chr6.3:68526392-68526411 | MS.gene45016:CDS | 30.0% | |
| TTGAAAAAGAAGTGGGTATT+GGG | - | chr6.3:68525436-68525455 | None:intergenic | 30.0% | |
| TTGTTGGAGATAGTTAAACT+GGG | - | chr6.3:68527214-68527233 | None:intergenic | 30.0% | |
| TTTGTTGGAGATAGTTAAAC+TGG | - | chr6.3:68527215-68527234 | None:intergenic | 30.0% | |
| ! | AAACCTTGATGTGTTATTGT+AGG | - | chr6.3:68527376-68527395 | None:intergenic | 30.0% |
| ! | AACCTTGATGTGTTATTGTA+GGG | - | chr6.3:68527375-68527394 | None:intergenic | 30.0% |
| ! | ATCTAATATGGAAACCCTTT+TGG | - | chr6.3:68526344-68526363 | None:intergenic | 30.0% |
| ! | TCAGCAAATCTTTTTCCTTT+AGG | - | chr6.3:68527465-68527484 | None:intergenic | 30.0% |
| !! | ATCTTGATTGGTAATGATTC+TGG | - | chr6.3:68526047-68526066 | None:intergenic | 30.0% |
| !! | TAGATGCTTTAGTTTGTTCA+AGG | - | chr6.3:68526185-68526204 | None:intergenic | 30.0% |
| !!! | ACAGAACTTGTTTTGAATGT+TGG | - | chr6.3:68526809-68526828 | None:intergenic | 30.0% |
| !!! | CAGCAATCATTTTTTTCCTA+AGG | - | chr6.3:68526599-68526618 | None:intergenic | 30.0% |
| !!! | TTCAACAGCTTTTTTTCGAA+CGG | - | chr6.3:68526755-68526774 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTATGACTCTTCC+AGG | - | chr6.3:68527239-68527258 | None:intergenic | 30.0% |
| AGAAGAGAAAGACGACAAAT+TGG | + | chr6.3:68527541-68527560 | MS.gene45016:CDS | 35.0% | |
| AGCAAATTTCCAAGTTTCCT+TGG | - | chr6.3:68525064-68525083 | None:intergenic | 35.0% | |
| AGGAAGAGACATATTCAGTA+GGG | - | chr6.3:68525264-68525283 | None:intergenic | 35.0% | |
| AGTCCCACAAAAATCATTCA+CGG | - | chr6.3:68527505-68527524 | None:intergenic | 35.0% | |
| AGTGAGAGATGCTAATGAAA+TGG | - | chr6.3:68527285-68527304 | None:intergenic | 35.0% | |
| ATGTTACATGTGCACCAAAA+GGG | + | chr6.3:68526327-68526346 | MS.gene45016:CDS | 35.0% | |
| CATGCATTTGTAACACATAC+CGG | - | chr6.3:68526016-68526035 | None:intergenic | 35.0% | |
| CTGTACGAATTGTTAATCTG+TGG | + | chr6.3:68525082-68525101 | MS.gene45016:CDS | 35.0% | |
| CTTGAAAAAGAAGTGGGTAT+TGG | - | chr6.3:68525437-68525456 | None:intergenic | 35.0% | |
| GAAGAGAAAGACGACAAATT+GGG | + | chr6.3:68527542-68527561 | MS.gene45016:CDS | 35.0% | |
| GCATATTCAAATGGTCGTAA+TGG | + | chr6.3:68525131-68525150 | MS.gene45016:CDS | 35.0% | |
| GGTCAACTAAAGTGTGAAAA+TGG | + | chr6.3:68526364-68526383 | MS.gene45016:CDS | 35.0% | |
| TAACTATCTCCAACAAAACC+TGG | + | chr6.3:68527218-68527237 | MS.gene45016:intron | 35.0% | |
| TCTGTTGTCTTAGACATCAT+TGG | + | chr6.3:68525587-68525606 | MS.gene45016:intron | 35.0% | |
| TGTTGGAGATAGTTAAACTG+GGG | - | chr6.3:68527213-68527232 | None:intergenic | 35.0% | |
| TTAACAACAGGATGAAGACT+TGG | + | chr6.3:68525002-68525021 | MS.gene45016:intron | 35.0% | |
| ! | AACTATAAGTTGCTTTGGAC+TGG | + | chr6.3:68525373-68525392 | MS.gene45016:CDS | 35.0% |
| ! | ACATTTTCTCTTTTGATGCC+AGG | + | chr6.3:68526234-68526253 | MS.gene45016:intron | 35.0% |
| ! | TCTTTTTCCTTTAGGCTTAC+TGG | - | chr6.3:68527457-68527476 | None:intergenic | 35.0% |
| ! | TTTGAAGACAACCTTTTTGC+AGG | - | chr6.3:68527170-68527189 | None:intergenic | 35.0% |
| !! | CAATACCCACTTCTTTTTCA+AGG | + | chr6.3:68525435-68525454 | MS.gene45016:CDS | 35.0% |
| !! | CTTTAGAGCATGCATATGTT+TGG | - | chr6.3:68527309-68527328 | None:intergenic | 35.0% |
| !!! | CACCTTGTTAGTTTTTGCAA+CGG | - | chr6.3:68526275-68526294 | None:intergenic | 35.0% |
| !!! | GTCTATCTTTTAGGGTCATA+GGG | + | chr6.3:68525225-68525244 | MS.gene45016:intron | 35.0% |
| !!! | TCAACAGCTTTTTTTCGAAC+GGG | - | chr6.3:68526754-68526773 | None:intergenic | 35.0% |
| !!! | TGTCTATCTTTTAGGGTCAT+AGG | + | chr6.3:68525224-68525243 | MS.gene45016:intron | 35.0% |
| !!! | TTTTTTCCTAAGGTCTGATG+CGG | - | chr6.3:68526589-68526608 | None:intergenic | 35.0% |
| AAGACGACAAATTGGGAAGA+AGG | + | chr6.3:68527549-68527568 | MS.gene45016:CDS | 40.0% | |
| ACTGAGTATGATCCAGAGAA+CGG | + | chr6.3:68527131-68527150 | MS.gene45016:CDS | 40.0% | |
| AGTTTGATCAATCAGACAGG+GGG | + | chr6.3:68525829-68525848 | MS.gene45016:CDS | 40.0% | |
| ATCATACTCAGTTGTAGCAG+AGG | - | chr6.3:68527123-68527142 | None:intergenic | 40.0% | |
| CAAAAATCATTCACGGCACA+AGG | - | chr6.3:68527498-68527517 | None:intergenic | 40.0% | |
| CAGGAAGAGACATATTCAGT+AGG | - | chr6.3:68525265-68525284 | None:intergenic | 40.0% | |
| CAGTTTGATCAATCAGACAG+GGG | + | chr6.3:68525828-68525847 | MS.gene45016:CDS | 40.0% | |
| CGAATACAACTCCTGCAAAA+AGG | + | chr6.3:68527156-68527175 | MS.gene45016:CDS | 40.0% | |
| CGGTATGTGTTACAAATGCA+TGG | + | chr6.3:68526014-68526033 | MS.gene45016:CDS | 40.0% | |
| CGTTGCAAAAACTAACAAGG+TGG | + | chr6.3:68526273-68526292 | MS.gene45016:CDS | 40.0% | |
| CTAACAAGGTGGTTACTTCA+AGG | + | chr6.3:68526284-68526303 | MS.gene45016:CDS | 40.0% | |
| CTACTGAATATGTCTCTTCC+TGG | + | chr6.3:68525263-68525282 | MS.gene45016:CDS | 40.0% | |
| CTATGGTATTCAGGGTGAAA+TGG | + | chr6.3:68526780-68526799 | MS.gene45016:CDS | 40.0% | |
| CTTGCTGAACTGTACTTTGT+GGG | + | chr6.3:68525783-68525802 | MS.gene45016:CDS | 40.0% | |
| GACCGTTGCAAAAACTAACA+AGG | + | chr6.3:68526270-68526289 | MS.gene45016:CDS | 40.0% | |
| GATGTTACATGTGCACCAAA+AGG | + | chr6.3:68526326-68526345 | MS.gene45016:CDS | 40.0% | |
| GCAATCACAGAATGATCATG+TGG | + | chr6.3:68527003-68527022 | MS.gene45016:CDS | 40.0% | |
| GCAGTTTGATCAATCAGACA+GGG | + | chr6.3:68525827-68525846 | MS.gene45016:CDS | 40.0% | |
| TAAATGGAAACCAGACTGCA+CGG | + | chr6.3:68525721-68525740 | MS.gene45016:intron | 40.0% | |
| TAAATGGTTAGTGAGGACCT+TGG | - | chr6.3:68526412-68526431 | None:intergenic | 40.0% | |
| TACCTCTTCTTTCAGCAGTT+TGG | - | chr6.3:68526876-68526895 | None:intergenic | 40.0% | |
| TCATACTCAGTTGTAGCAGA+GGG | - | chr6.3:68527122-68527141 | None:intergenic | 40.0% | |
| TGCCCTACAATAACACATCA+AGG | + | chr6.3:68527370-68527389 | MS.gene45016:intron | 40.0% | |
| TGTGTTACAAATGCATGGAG+TGG | + | chr6.3:68526019-68526038 | MS.gene45016:CDS | 40.0% | |
| TTCTTTCAGATCATCTCTCC+AGG | - | chr6.3:68525284-68525303 | None:intergenic | 40.0% | |
| TTTCCTTTAGGCTTACTGGT+AGG | - | chr6.3:68527453-68527472 | None:intergenic | 40.0% | |
| ! | ACTTGCTGAACTGTACTTTG+TGG | + | chr6.3:68525782-68525801 | MS.gene45016:CDS | 40.0% |
| ! | GGAGTTGACATCTGATTTTG+TGG | + | chr6.3:68527419-68527438 | MS.gene45016:intron | 40.0% |
| ! | GTGCCGTGAATGATTTTTGT+GGG | + | chr6.3:68527499-68527518 | MS.gene45016:CDS | 40.0% |
| ! | GTTGACATCTGATTTTGTGG+AGG | + | chr6.3:68527422-68527441 | MS.gene45016:CDS | 40.0% |
| ! | TGTGCCGTGAATGATTTTTG+TGG | + | chr6.3:68527498-68527517 | MS.gene45016:CDS | 40.0% |
| !! | AATGGTCGTAATGGATGCTA+AGG | + | chr6.3:68525140-68525159 | MS.gene45016:CDS | 40.0% |
| !! | ATGACTCTTCCAGGTTTTGT+TGG | - | chr6.3:68527230-68527249 | None:intergenic | 40.0% |
| !! | GTTTCAGGGCATTGATTTGT+GGG | - | chr6.3:68526147-68526166 | None:intergenic | 40.0% |
| !! | TGTTTCAGGGCATTGATTTG+TGG | - | chr6.3:68526148-68526167 | None:intergenic | 40.0% |
| !!! | AGCTTTTTTTCGAACGGGTA+TGG | - | chr6.3:68526749-68526768 | None:intergenic | 40.0% |
| AAGGTGGTTACTTCAAGGAG+TGG | + | chr6.3:68526289-68526308 | MS.gene45016:CDS | 45.0% | |
| ACTCCTACCAGTAAGCCTAA+AGG | + | chr6.3:68527447-68527466 | MS.gene45016:CDS | 45.0% | |
| ACTGCTCGTAACAAGAATGG+GGG | + | chr6.3:68525105-68525124 | MS.gene45016:CDS | 45.0% | |
| ATGCGGAGATTCCTAAGAGT+TGG | - | chr6.3:68526572-68526591 | None:intergenic | 45.0% | |
| CATACTCAGTTGTAGCAGAG+GGG | - | chr6.3:68527121-68527140 | None:intergenic | 45.0% | |
| CGCAGTTTGATCAATCAGAC+AGG | + | chr6.3:68525826-68525845 | MS.gene45016:CDS | 45.0% | |
| GACTGCTCGTAACAAGAATG+GGG | + | chr6.3:68525104-68525123 | MS.gene45016:CDS | 45.0% | |
| GACTTTCCTTAGCTCAGTTG+AGG | + | chr6.3:68526850-68526869 | MS.gene45016:CDS | 45.0% | |
| GGACTGCTCGTAACAAGAAT+GGG | + | chr6.3:68525103-68525122 | MS.gene45016:CDS | 45.0% | |
| GTTGTATTCGAACCGTTCTC+TGG | - | chr6.3:68527146-68527165 | None:intergenic | 45.0% | |
| TATACCAGTTGCAGGCTGAA+TGG | - | chr6.3:68525890-68525909 | None:intergenic | 45.0% | |
| TGCGGAGATTCCTAAGAGTT+GGG | - | chr6.3:68526571-68526590 | None:intergenic | 45.0% | |
| TGGACTGCTCGTAACAAGAA+TGG | + | chr6.3:68525102-68525121 | MS.gene45016:CDS | 45.0% | |
| TGGTTACTTCAAGGAGTGGA+TGG | + | chr6.3:68526293-68526312 | MS.gene45016:CDS | 45.0% | |
| TTTCAGTGTGCCTCCGTAAT+AGG | + | chr6.3:68525484-68525503 | MS.gene45016:CDS | 45.0% | |
| ! | TGGGGGAGAGCATATTCAAA+TGG | + | chr6.3:68525122-68525141 | MS.gene45016:CDS | 45.0% |
| !! | GTCGTAATGGATGCTAAGGT+AGG | + | chr6.3:68525144-68525163 | MS.gene45016:intron | 45.0% |
| !!! | TTTTTTTATTATATCATAAT+AGG | + | chr6.3:68526475-68526494 | MS.gene45016:intron | 5.0% |
| GAATCTCCGCATCAGACCTT+AGG | + | chr6.3:68526580-68526599 | MS.gene45016:CDS | 50.0% | |
| GGAGATTGCACCCAACTCTT+AGG | + | chr6.3:68526558-68526577 | MS.gene45016:CDS | 50.0% | |
| GGCCAAACTGCTGAAAGAAG+AGG | + | chr6.3:68526871-68526890 | MS.gene45016:CDS | 50.0% | |
| GTTAGTGAGGACCTTGGAGT+AGG | - | chr6.3:68526406-68526425 | None:intergenic | 50.0% | |
| GTTTGGCCTCAACTGAGCTA+AGG | - | chr6.3:68526859-68526878 | None:intergenic | 50.0% | |
| TTAGTACAGTCCGTGCAGTC+TGG | - | chr6.3:68525734-68525753 | None:intergenic | 50.0% | |
| ! | AGGAGTGGATGGACTTACGA+TGG | + | chr6.3:68526304-68526323 | MS.gene45016:CDS | 50.0% |
| ! | TTTTGCAACGGTCACGCAAC+AGG | - | chr6.3:68526263-68526282 | None:intergenic | 50.0% |
| CGGTCACGCAACAGGTTTCC+TGG | - | chr6.3:68526255-68526274 | None:intergenic | 60.0% | |
| GCAGCCATTCAGCCTGCAAC+TGG | + | chr6.3:68525883-68525902 | MS.gene45016:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 68524949 | 68527581 | 68524949 | ID=MS.gene45016 |
| chr6.3 | mRNA | 68524949 | 68527581 | 68524949 | ID=MS.gene45016.t1;Parent=MS.gene45016 |
| chr6.3 | exon | 68524949 | 68524954 | 68524949 | ID=MS.gene45016.t1.exon1;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68524949 | 68524954 | 68524949 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68525012 | 68525161 | 68525012 | ID=MS.gene45016.t1.exon2;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68525012 | 68525161 | 68525012 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68525238 | 68525505 | 68525238 | ID=MS.gene45016.t1.exon3;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68525238 | 68525505 | 68525238 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68525600 | 68525687 | 68525600 | ID=MS.gene45016.t1.exon4;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68525600 | 68525687 | 68525600 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68525777 | 68525904 | 68525777 | ID=MS.gene45016.t1.exon5;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68525777 | 68525904 | 68525777 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68526005 | 68526168 | 68526005 | ID=MS.gene45016.t1.exon6;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68526005 | 68526168 | 68526005 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68526256 | 68526413 | 68526256 | ID=MS.gene45016.t1.exon7;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68526256 | 68526413 | 68526256 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68526497 | 68526617 | 68526497 | ID=MS.gene45016.t1.exon8;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68526497 | 68526617 | 68526497 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68526722 | 68526892 | 68526722 | ID=MS.gene45016.t1.exon9;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68526722 | 68526892 | 68526722 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68526965 | 68527024 | 68526965 | ID=MS.gene45016.t1.exon10;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68526965 | 68527024 | 68526965 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68527107 | 68527193 | 68527107 | ID=MS.gene45016.t1.exon11;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68527107 | 68527193 | 68527107 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| chr6.3 | exon | 68527420 | 68527581 | 68527420 | ID=MS.gene45016.t1.exon12;Parent=MS.gene45016.t1 |
| chr6.3 | CDS | 68527420 | 68527581 | 68527420 | ID=cds.MS.gene45016.t1;Parent=MS.gene45016.t1 |
| Gene Sequence |
| Protein sequence |
