Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45082.t1 | XP_003613292.1 | 73.4 | 350 | 24 | 2 | 1 | 281 | 1 | 350 | 4.20E-117 | 431 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45082.t1 | Q94JU2 | 45.7 | 223 | 116 | 2 | 36 | 257 | 108 | 326 | 6.0e-48 | 192.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45082.t1 | G7K2S5 | 73.4 | 350 | 24 | 2 | 1 | 281 | 1 | 350 | 3.0e-117 | 431.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052333 | MS.gene45082 | 0.828673 | 7.89E-55 | -1.69E-46 |
MS.gene054291 | MS.gene45082 | -0.804766 | 1.85E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45082.t1 | MTR_5g034980 | 88.519 | 270 | 25 | 2 | 18 | 281 | 81 | 350 | 1.72e-159 | 447 |
MS.gene45082.t1 | MTR_5g034980 | 94.444 | 36 | 2 | 0 | 1 | 36 | 1 | 36 | 2.90e-13 | 69.3 |
MS.gene45082.t1 | MTR_5g034930 | 73.171 | 246 | 65 | 1 | 36 | 280 | 103 | 348 | 9.52e-129 | 370 |
MS.gene45082.t1 | MTR_5g034910 | 73.554 | 242 | 60 | 1 | 36 | 277 | 104 | 341 | 1.94e-126 | 363 |
MS.gene45082.t1 | MTR_5g034970 | 80.567 | 247 | 34 | 2 | 36 | 281 | 104 | 337 | 2.86e-125 | 360 |
MS.gene45082.t1 | MTR_5g034980 | 86.286 | 175 | 19 | 1 | 18 | 187 | 81 | 255 | 1.02e-101 | 299 |
MS.gene45082.t1 | MTR_5g034980 | 94.444 | 36 | 2 | 0 | 1 | 36 | 1 | 36 | 1.60e-13 | 69.7 |
MS.gene45082.t1 | MTR_4g106720 | 44.130 | 247 | 135 | 1 | 33 | 276 | 106 | 352 | 1.54e-62 | 201 |
MS.gene45082.t1 | MTR_0103s0090 | 44.000 | 250 | 132 | 3 | 36 | 280 | 17 | 263 | 1.42e-59 | 191 |
MS.gene45082.t1 | MTR_0103s0090 | 44.000 | 250 | 132 | 3 | 36 | 280 | 108 | 354 | 3.03e-58 | 190 |
MS.gene45082.t1 | MTR_3g090550 | 41.463 | 246 | 142 | 2 | 36 | 281 | 102 | 345 | 3.78e-58 | 189 |
MS.gene45082.t1 | MTR_5g034990 | 40.075 | 267 | 152 | 4 | 14 | 277 | 90 | 351 | 1.49e-55 | 183 |
MS.gene45082.t1 | MTR_6g007743 | 40.329 | 243 | 137 | 3 | 38 | 276 | 111 | 349 | 8.80e-55 | 181 |
MS.gene45082.t1 | MTR_6g007753 | 44.490 | 245 | 128 | 3 | 36 | 276 | 393 | 633 | 2.47e-54 | 186 |
MS.gene45082.t1 | MTR_6g007753 | 41.841 | 239 | 131 | 3 | 42 | 276 | 75 | 309 | 5.77e-47 | 166 |
MS.gene45082.t1 | MTR_6g007750 | 42.105 | 247 | 134 | 4 | 36 | 277 | 111 | 353 | 5.08e-54 | 179 |
MS.gene45082.t1 | MTR_6g007747 | 44.444 | 243 | 127 | 3 | 38 | 276 | 109 | 347 | 6.67e-54 | 179 |
MS.gene45082.t1 | MTR_1g014510 | 39.113 | 248 | 142 | 4 | 35 | 274 | 108 | 354 | 4.39e-52 | 176 |
MS.gene45082.t1 | MTR_6g007757 | 45.783 | 249 | 125 | 5 | 36 | 278 | 110 | 354 | 4.40e-51 | 172 |
MS.gene45082.t1 | MTR_6g007760 | 40.796 | 201 | 117 | 2 | 38 | 237 | 110 | 309 | 8.03e-49 | 164 |
MS.gene45082.t1 | MTR_6g007740 | 39.271 | 247 | 140 | 3 | 35 | 276 | 108 | 349 | 2.37e-45 | 159 |
MS.gene45082.t1 | MTR_3g012420 | 34.498 | 229 | 136 | 3 | 38 | 258 | 116 | 338 | 2.80e-43 | 152 |
MS.gene45082.t1 | MTR_3g072560 | 36.752 | 234 | 146 | 2 | 36 | 269 | 115 | 346 | 2.11e-42 | 150 |
MS.gene45082.t1 | MTR_3g072500 | 31.557 | 244 | 165 | 1 | 37 | 278 | 15 | 258 | 3.06e-40 | 141 |
MS.gene45082.t1 | MTR_8g092650 | 31.984 | 247 | 162 | 2 | 18 | 258 | 6 | 252 | 7.61e-40 | 140 |
MS.gene45082.t1 | MTR_6g081840 | 32.000 | 250 | 156 | 5 | 38 | 280 | 109 | 351 | 7.70e-40 | 142 |
MS.gene45082.t1 | MTR_8g041390 | 32.174 | 230 | 143 | 4 | 38 | 258 | 112 | 337 | 9.48e-40 | 142 |
MS.gene45082.t1 | MTR_1g038560 | 34.188 | 234 | 148 | 2 | 37 | 264 | 99 | 332 | 1.61e-39 | 140 |
MS.gene45082.t1 | MTR_0096s0100 | 30.870 | 230 | 157 | 2 | 36 | 264 | 115 | 343 | 5.26e-39 | 140 |
MS.gene45082.t1 | MTR_3g072500 | 31.557 | 244 | 165 | 1 | 37 | 278 | 118 | 361 | 5.98e-39 | 140 |
MS.gene45082.t1 | MTR_8g092650 | 31.984 | 247 | 162 | 2 | 18 | 258 | 84 | 330 | 1.41e-38 | 139 |
MS.gene45082.t1 | MTR_3g072530 | 34.400 | 250 | 158 | 4 | 36 | 281 | 111 | 358 | 1.58e-38 | 139 |
MS.gene45082.t1 | MTR_1g114210 | 31.982 | 222 | 150 | 1 | 37 | 257 | 107 | 328 | 7.67e-38 | 136 |
MS.gene45082.t1 | MTR_1g030580 | 33.778 | 225 | 149 | 0 | 37 | 261 | 114 | 338 | 1.24e-37 | 137 |
MS.gene45082.t1 | MTR_2g027030 | 33.333 | 225 | 146 | 2 | 36 | 257 | 109 | 332 | 5.49e-37 | 135 |
MS.gene45082.t1 | MTR_4g094340 | 33.588 | 262 | 139 | 6 | 36 | 275 | 39 | 287 | 8.27e-37 | 132 |
MS.gene45082.t1 | MTR_4g094340 | 33.588 | 262 | 139 | 6 | 36 | 275 | 105 | 353 | 3.08e-36 | 132 |
MS.gene45082.t1 | MTR_4g094340 | 33.588 | 262 | 139 | 6 | 36 | 275 | 123 | 371 | 5.16e-36 | 132 |
MS.gene45082.t1 | MTR_4g094342 | 34.375 | 224 | 142 | 3 | 34 | 252 | 108 | 331 | 2.00e-35 | 130 |
MS.gene45082.t1 | MTR_3g095460 | 32.068 | 237 | 157 | 2 | 38 | 270 | 104 | 340 | 2.62e-35 | 130 |
MS.gene45082.t1 | MTR_2g007970 | 32.773 | 238 | 154 | 3 | 36 | 270 | 109 | 343 | 1.21e-34 | 129 |
MS.gene45082.t1 | MTR_1g068630 | 30.992 | 242 | 160 | 4 | 38 | 276 | 114 | 351 | 1.74e-34 | 128 |
MS.gene45082.t1 | MTR_4g094352 | 32.090 | 268 | 157 | 6 | 34 | 278 | 108 | 373 | 1.90e-34 | 128 |
MS.gene45082.t1 | MTR_2g007990 | 30.242 | 248 | 152 | 3 | 36 | 272 | 112 | 349 | 3.90e-34 | 127 |
MS.gene45082.t1 | MTR_1g023180 | 28.740 | 254 | 161 | 3 | 36 | 270 | 118 | 370 | 5.44e-34 | 127 |
MS.gene45082.t1 | MTR_4g129650 | 31.395 | 258 | 152 | 4 | 38 | 278 | 3 | 252 | 5.95e-34 | 124 |
MS.gene45082.t1 | MTR_1g030600 | 33.480 | 227 | 146 | 4 | 36 | 258 | 115 | 340 | 5.96e-34 | 127 |
MS.gene45082.t1 | MTR_3g112480 | 29.804 | 255 | 163 | 4 | 36 | 276 | 62 | 314 | 9.54e-34 | 125 |
MS.gene45082.t1 | MTR_8g006010 | 29.741 | 232 | 163 | 0 | 38 | 269 | 109 | 340 | 1.23e-33 | 126 |
MS.gene45082.t1 | MTR_5g021160 | 30.303 | 231 | 153 | 3 | 38 | 263 | 23 | 250 | 1.33e-33 | 124 |
MS.gene45082.t1 | MTR_4g129650 | 30.855 | 269 | 165 | 4 | 25 | 278 | 97 | 359 | 1.63e-33 | 125 |
MS.gene45082.t1 | MTR_3g112480 | 29.804 | 255 | 163 | 4 | 36 | 276 | 117 | 369 | 2.55e-33 | 125 |
MS.gene45082.t1 | MTR_2g016710 | 30.942 | 223 | 148 | 2 | 37 | 257 | 106 | 324 | 3.10e-33 | 125 |
MS.gene45082.t1 | MTR_1g074160 | 31.140 | 228 | 148 | 4 | 35 | 258 | 109 | 331 | 3.27e-33 | 124 |
MS.gene45082.t1 | MTR_7g100050 | 32.468 | 231 | 145 | 5 | 38 | 262 | 112 | 337 | 6.42e-33 | 124 |
MS.gene45082.t1 | MTR_7g111830 | 31.004 | 229 | 151 | 2 | 36 | 257 | 104 | 332 | 7.33e-33 | 124 |
MS.gene45082.t1 | MTR_1g070175 | 28.879 | 232 | 160 | 2 | 35 | 265 | 112 | 339 | 8.84e-33 | 123 |
MS.gene45082.t1 | MTR_5g021160 | 30.303 | 231 | 153 | 3 | 38 | 263 | 106 | 333 | 1.26e-32 | 123 |
MS.gene45082.t1 | MTR_1g074020 | 32.314 | 229 | 138 | 3 | 38 | 258 | 112 | 331 | 1.26e-32 | 123 |
MS.gene45082.t1 | MTR_4g094362 | 29.435 | 248 | 173 | 2 | 23 | 268 | 98 | 345 | 1.69e-32 | 123 |
MS.gene45082.t1 | MTR_6g036450 | 32.735 | 223 | 147 | 2 | 38 | 257 | 114 | 336 | 1.85e-32 | 122 |
MS.gene45082.t1 | MTR_1g074120 | 30.043 | 233 | 146 | 3 | 35 | 259 | 112 | 335 | 3.69e-32 | 122 |
MS.gene45082.t1 | MTR_3g095450 | 30.924 | 249 | 158 | 2 | 18 | 257 | 86 | 329 | 9.46e-32 | 120 |
MS.gene45082.t1 | MTR_1g051120 | 31.416 | 226 | 154 | 1 | 35 | 259 | 112 | 337 | 2.89e-31 | 119 |
MS.gene45082.t1 | MTR_2g065550 | 29.545 | 220 | 154 | 1 | 38 | 257 | 111 | 329 | 4.27e-31 | 119 |
MS.gene45082.t1 | MTR_1g030400 | 31.878 | 229 | 148 | 3 | 36 | 257 | 104 | 331 | 4.81e-31 | 119 |
MS.gene45082.t1 | MTR_5g025370 | 30.126 | 239 | 149 | 3 | 40 | 261 | 111 | 348 | 4.96e-31 | 119 |
MS.gene45082.t1 | MTR_5g025400 | 31.034 | 261 | 154 | 7 | 40 | 278 | 112 | 368 | 6.70e-31 | 119 |
MS.gene45082.t1 | MTR_2g007960 | 30.172 | 232 | 150 | 3 | 36 | 257 | 109 | 338 | 1.88e-30 | 118 |
MS.gene45082.t1 | MTR_8g006090 | 28.514 | 249 | 169 | 3 | 38 | 278 | 31 | 278 | 1.98e-30 | 115 |
MS.gene45082.t1 | MTR_3g112480 | 28.689 | 244 | 158 | 4 | 47 | 276 | 1 | 242 | 2.19e-30 | 115 |
MS.gene45082.t1 | MTR_3g095420 | 29.134 | 254 | 172 | 3 | 18 | 265 | 88 | 339 | 4.33e-30 | 116 |
MS.gene45082.t1 | MTR_2g102340 | 30.435 | 276 | 166 | 7 | 23 | 281 | 96 | 362 | 5.69e-30 | 116 |
MS.gene45082.t1 | MTR_8g006090 | 28.514 | 249 | 169 | 3 | 38 | 278 | 111 | 358 | 1.26e-29 | 115 |
MS.gene45082.t1 | MTR_2g007260 | 30.196 | 255 | 171 | 2 | 23 | 270 | 98 | 352 | 2.01e-29 | 115 |
MS.gene45082.t1 | MTR_1g074070 | 28.862 | 246 | 158 | 3 | 35 | 272 | 112 | 348 | 4.02e-29 | 113 |
MS.gene45082.t1 | MTR_5g025340 | 30.315 | 254 | 155 | 5 | 40 | 274 | 111 | 361 | 4.64e-29 | 114 |
MS.gene45082.t1 | MTR_3g019050 | 30.638 | 235 | 160 | 3 | 25 | 257 | 104 | 337 | 6.39e-29 | 114 |
MS.gene45082.t1 | MTR_5g025330 | 29.688 | 256 | 162 | 4 | 40 | 278 | 110 | 364 | 6.91e-29 | 115 |
MS.gene45082.t1 | MTR_6g007757 | 42.208 | 154 | 84 | 2 | 36 | 188 | 110 | 259 | 9.87e-29 | 110 |
MS.gene45082.t1 | MTR_3g072520 | 33.333 | 231 | 139 | 4 | 36 | 257 | 106 | 330 | 1.34e-28 | 112 |
MS.gene45082.t1 | MTR_1g073990 | 31.330 | 233 | 142 | 4 | 35 | 258 | 112 | 335 | 2.36e-28 | 111 |
MS.gene45082.t1 | MTR_4g094360 | 29.388 | 245 | 168 | 3 | 16 | 257 | 46 | 288 | 3.12e-28 | 111 |
MS.gene45082.t1 | MTR_4g094360 | 29.388 | 245 | 168 | 3 | 16 | 257 | 93 | 335 | 7.91e-28 | 110 |
MS.gene45082.t1 | MTR_5g025290 | 27.059 | 255 | 167 | 5 | 40 | 277 | 112 | 364 | 9.72e-28 | 110 |
MS.gene45082.t1 | MTR_1g052205 | 29.954 | 217 | 132 | 5 | 50 | 258 | 11 | 215 | 1.22e-27 | 107 |
MS.gene45082.t1 | MTR_5g025290 | 27.311 | 238 | 155 | 4 | 40 | 261 | 140 | 375 | 2.11e-27 | 110 |
MS.gene45082.t1 | MTR_8g006120 | 28.194 | 227 | 163 | 0 | 38 | 264 | 110 | 336 | 2.42e-27 | 109 |
MS.gene45082.t1 | MTR_8g072350 | 28.163 | 245 | 160 | 3 | 41 | 270 | 111 | 354 | 2.60e-27 | 109 |
MS.gene45082.t1 | MTR_5g089390 | 26.250 | 240 | 172 | 1 | 33 | 272 | 108 | 342 | 6.62e-26 | 105 |
MS.gene45082.t1 | MTR_5g069040 | 30.303 | 231 | 148 | 4 | 36 | 257 | 115 | 341 | 1.04e-25 | 105 |
MS.gene45082.t1 | MTR_2g016710 | 31.343 | 201 | 132 | 2 | 37 | 235 | 106 | 302 | 1.21e-25 | 103 |
MS.gene45082.t1 | MTR_5g068790 | 30.088 | 226 | 153 | 4 | 36 | 257 | 115 | 339 | 2.21e-25 | 103 |
MS.gene45082.t1 | MTR_3g095440 | 29.825 | 228 | 152 | 3 | 36 | 257 | 104 | 329 | 4.31e-24 | 100 |
MS.gene45082.t1 | MTR_8g006050 | 25.738 | 237 | 161 | 2 | 23 | 257 | 79 | 302 | 8.35e-22 | 93.6 |
MS.gene45082.t1 | MTR_4g094360 | 28.251 | 223 | 155 | 3 | 16 | 235 | 93 | 313 | 4.94e-20 | 88.2 |
MS.gene45082.t1 | MTR_3g072500 | 32.680 | 153 | 101 | 1 | 37 | 187 | 118 | 270 | 1.02e-19 | 87.0 |
MS.gene45082.t1 | MTR_8g006090 | 26.633 | 199 | 144 | 2 | 38 | 235 | 111 | 308 | 2.97e-19 | 85.9 |
MS.gene45082.t1 | MTR_5g012650 | 26.587 | 252 | 170 | 5 | 33 | 274 | 102 | 348 | 3.25e-19 | 86.7 |
MS.gene45082.t1 | MTR_4g100840 | 25.735 | 272 | 186 | 5 | 17 | 275 | 84 | 352 | 5.10e-19 | 85.9 |
MS.gene45082.t1 | MTR_5g021160 | 30.719 | 153 | 98 | 3 | 38 | 185 | 106 | 255 | 1.52e-15 | 75.1 |
MS.gene45082.t1 | MTR_4g094340 | 32.353 | 170 | 86 | 4 | 36 | 189 | 105 | 261 | 4.87e-15 | 73.6 |
MS.gene45082.t1 | MTR_4g094340 | 32.353 | 170 | 86 | 4 | 36 | 189 | 123 | 279 | 6.54e-15 | 73.6 |
MS.gene45082.t1 | MTR_1g074160 | 28.481 | 158 | 104 | 4 | 35 | 188 | 109 | 261 | 3.03e-14 | 71.2 |
MS.gene45082.t1 | MTR_1g014790 | 34.752 | 141 | 84 | 5 | 38 | 171 | 62 | 201 | 6.10e-14 | 69.3 |
MS.gene45082.t1 | MTR_3g072530 | 29.630 | 189 | 91 | 6 | 36 | 185 | 111 | 296 | 7.60e-14 | 70.9 |
MS.gene45082.t1 | MTR_3g095440 | 27.742 | 155 | 104 | 3 | 36 | 184 | 104 | 256 | 6.74e-12 | 64.7 |
MS.gene45082.t1 | MTR_4g094348 | 39.252 | 107 | 54 | 3 | 36 | 132 | 19 | 124 | 3.00e-11 | 61.2 |
MS.gene45082.t1 | MTR_1g068720 | 31.206 | 141 | 90 | 4 | 125 | 258 | 84 | 224 | 3.10e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45082.t1 | AT3G28050 | 43.182 | 264 | 124 | 6 | 36 | 280 | 108 | 364 | 1.25e-62 | 201 |
MS.gene45082.t1 | AT5G40230 | 42.339 | 248 | 138 | 2 | 36 | 280 | 117 | 362 | 6.08e-60 | 195 |
MS.gene45082.t1 | AT5G40240 | 41.870 | 246 | 130 | 3 | 36 | 274 | 116 | 355 | 1.20e-59 | 194 |
MS.gene45082.t1 | AT5G40240 | 41.870 | 246 | 130 | 3 | 36 | 274 | 116 | 355 | 1.20e-59 | 194 |
MS.gene45082.t1 | AT5G40240 | 41.870 | 246 | 130 | 3 | 36 | 274 | 130 | 369 | 3.03e-59 | 193 |
MS.gene45082.t1 | AT4G15540 | 45.374 | 227 | 114 | 1 | 36 | 262 | 113 | 329 | 1.12e-51 | 172 |
MS.gene45082.t1 | AT4G15540 | 45.374 | 227 | 114 | 1 | 36 | 262 | 113 | 329 | 1.12e-51 | 172 |
MS.gene45082.t1 | AT3G28070 | 39.689 | 257 | 132 | 6 | 36 | 280 | 21 | 266 | 7.93e-51 | 168 |
MS.gene45082.t1 | AT3G28080 | 39.271 | 247 | 144 | 4 | 38 | 280 | 23 | 267 | 9.27e-51 | 168 |
MS.gene45082.t1 | AT3G28080 | 39.271 | 247 | 144 | 4 | 38 | 280 | 23 | 267 | 9.27e-51 | 168 |
MS.gene45082.t1 | AT3G28080 | 39.271 | 247 | 144 | 4 | 38 | 280 | 23 | 267 | 9.27e-51 | 168 |
MS.gene45082.t1 | AT3G28080 | 39.271 | 247 | 144 | 4 | 38 | 280 | 23 | 267 | 9.27e-51 | 168 |
MS.gene45082.t1 | AT3G28080 | 39.271 | 247 | 144 | 4 | 38 | 280 | 104 | 348 | 5.30e-50 | 168 |
MS.gene45082.t1 | AT3G28070 | 40.078 | 257 | 131 | 6 | 36 | 280 | 113 | 358 | 7.75e-50 | 168 |
MS.gene45082.t1 | AT3G28080 | 39.271 | 247 | 144 | 4 | 38 | 280 | 112 | 356 | 8.13e-50 | 168 |
MS.gene45082.t1 | AT5G40210 | 38.951 | 267 | 140 | 6 | 14 | 276 | 89 | 336 | 1.14e-48 | 165 |
MS.gene45082.t1 | AT3G28100 | 39.200 | 250 | 136 | 4 | 36 | 276 | 110 | 352 | 1.48e-47 | 162 |
MS.gene45082.t1 | AT3G28130 | 37.500 | 248 | 149 | 4 | 36 | 280 | 23 | 267 | 6.41e-46 | 155 |
MS.gene45082.t1 | AT3G28130 | 37.500 | 248 | 149 | 4 | 36 | 280 | 23 | 267 | 6.41e-46 | 155 |
MS.gene45082.t1 | AT3G28130 | 37.500 | 248 | 149 | 4 | 36 | 280 | 109 | 353 | 3.35e-45 | 156 |
MS.gene45082.t1 | AT3G28070 | 37.917 | 240 | 126 | 6 | 53 | 280 | 1 | 229 | 7.65e-44 | 149 |
MS.gene45082.t1 | AT3G28080 | 37.500 | 232 | 139 | 4 | 53 | 280 | 1 | 230 | 1.22e-43 | 149 |
MS.gene45082.t1 | AT4G08300 | 34.137 | 249 | 158 | 5 | 37 | 281 | 108 | 354 | 8.61e-42 | 147 |
MS.gene45082.t1 | AT1G21890 | 32.489 | 237 | 149 | 2 | 38 | 264 | 109 | 344 | 3.48e-41 | 146 |
MS.gene45082.t1 | AT2G39510 | 34.914 | 232 | 142 | 3 | 36 | 262 | 104 | 331 | 1.25e-40 | 144 |
MS.gene45082.t1 | AT3G28130 | 35.498 | 231 | 143 | 4 | 53 | 280 | 1 | 228 | 8.21e-40 | 139 |
MS.gene45082.t1 | AT1G44800 | 30.992 | 242 | 162 | 3 | 38 | 276 | 109 | 348 | 2.71e-39 | 141 |
MS.gene45082.t1 | AT5G07050 | 34.052 | 232 | 145 | 3 | 38 | 261 | 116 | 347 | 8.47e-39 | 140 |
MS.gene45082.t1 | AT3G28070 | 39.614 | 207 | 109 | 4 | 38 | 235 | 115 | 314 | 1.19e-38 | 138 |
MS.gene45082.t1 | AT3G18200 | 31.878 | 229 | 150 | 3 | 38 | 264 | 3 | 227 | 1.42e-37 | 133 |
MS.gene45082.t1 | AT3G30340 | 32.444 | 225 | 145 | 2 | 38 | 258 | 109 | 330 | 1.49e-36 | 134 |
MS.gene45082.t1 | AT3G18200 | 31.878 | 229 | 150 | 3 | 38 | 264 | 133 | 357 | 3.65e-36 | 133 |
MS.gene45082.t1 | AT4G28040 | 33.191 | 235 | 136 | 6 | 36 | 265 | 106 | 324 | 8.81e-36 | 131 |
MS.gene45082.t1 | AT4G28040 | 33.191 | 235 | 136 | 6 | 36 | 265 | 106 | 324 | 8.81e-36 | 131 |
MS.gene45082.t1 | AT4G28040 | 33.191 | 235 | 136 | 6 | 36 | 265 | 106 | 324 | 8.81e-36 | 131 |
MS.gene45082.t1 | AT4G28040 | 33.191 | 235 | 136 | 6 | 36 | 265 | 106 | 324 | 8.81e-36 | 131 |
MS.gene45082.t1 | AT4G28040 | 33.191 | 235 | 136 | 6 | 36 | 265 | 106 | 324 | 8.81e-36 | 131 |
MS.gene45082.t1 | AT4G08290 | 29.600 | 250 | 170 | 3 | 36 | 280 | 109 | 357 | 1.59e-34 | 129 |
MS.gene45082.t1 | AT4G30420 | 28.814 | 236 | 166 | 2 | 23 | 257 | 85 | 319 | 6.17e-34 | 127 |
MS.gene45082.t1 | AT4G30420 | 28.814 | 236 | 166 | 2 | 23 | 257 | 95 | 329 | 8.12e-34 | 127 |
MS.gene45082.t1 | AT1G09380 | 32.159 | 227 | 142 | 4 | 36 | 254 | 104 | 326 | 1.65e-33 | 125 |
MS.gene45082.t1 | AT1G70260 | 31.897 | 232 | 150 | 4 | 40 | 264 | 115 | 345 | 5.98e-33 | 124 |
MS.gene45082.t1 | AT5G13670 | 28.947 | 228 | 155 | 4 | 36 | 258 | 104 | 329 | 6.58e-33 | 124 |
MS.gene45082.t1 | AT2G40900 | 31.034 | 232 | 152 | 3 | 36 | 264 | 107 | 333 | 1.04e-32 | 124 |
MS.gene45082.t1 | AT4G01440 | 27.193 | 228 | 166 | 0 | 39 | 266 | 1 | 228 | 2.70e-32 | 120 |
MS.gene45082.t1 | AT4G01440 | 27.193 | 228 | 166 | 0 | 39 | 266 | 1 | 228 | 2.70e-32 | 120 |
MS.gene45082.t1 | AT1G43650 | 30.000 | 220 | 151 | 1 | 40 | 259 | 107 | 323 | 3.27e-32 | 122 |
MS.gene45082.t1 | AT3G28080 | 34.146 | 246 | 104 | 4 | 38 | 280 | 23 | 213 | 4.47e-32 | 118 |
MS.gene45082.t1 | AT4G01440 | 26.957 | 230 | 168 | 0 | 37 | 266 | 107 | 336 | 8.50e-32 | 121 |
MS.gene45082.t1 | AT3G28080 | 35.484 | 248 | 102 | 5 | 36 | 280 | 110 | 302 | 2.83e-31 | 118 |
MS.gene45082.t1 | AT1G21890 | 32.227 | 211 | 132 | 2 | 38 | 238 | 109 | 318 | 9.26e-31 | 118 |
MS.gene45082.t1 | AT2G37460 | 29.880 | 251 | 150 | 5 | 38 | 275 | 113 | 350 | 1.49e-30 | 118 |
MS.gene45082.t1 | AT4G19185 | 28.390 | 236 | 153 | 2 | 40 | 260 | 43 | 277 | 2.37e-30 | 116 |
MS.gene45082.t1 | AT5G45370 | 31.034 | 232 | 149 | 3 | 40 | 270 | 120 | 341 | 3.45e-30 | 116 |
MS.gene45082.t1 | AT1G75500 | 28.017 | 232 | 158 | 3 | 35 | 258 | 115 | 345 | 3.48e-30 | 117 |
MS.gene45082.t1 | AT1G75500 | 28.017 | 232 | 158 | 3 | 35 | 258 | 115 | 345 | 3.48e-30 | 117 |
MS.gene45082.t1 | AT3G56620 | 31.507 | 219 | 146 | 2 | 36 | 254 | 107 | 321 | 5.62e-30 | 116 |
MS.gene45082.t1 | AT4G19185 | 28.390 | 236 | 153 | 2 | 40 | 260 | 121 | 355 | 7.52e-30 | 116 |
MS.gene45082.t1 | AT5G64700 | 28.139 | 231 | 159 | 1 | 41 | 264 | 109 | 339 | 7.88e-30 | 115 |
MS.gene45082.t1 | AT5G45370 | 29.960 | 247 | 156 | 5 | 40 | 270 | 18 | 263 | 3.25e-29 | 112 |
MS.gene45082.t1 | AT5G45370 | 29.960 | 247 | 156 | 5 | 40 | 270 | 18 | 263 | 3.25e-29 | 112 |
MS.gene45082.t1 | AT5G45370 | 29.960 | 247 | 156 | 5 | 40 | 270 | 120 | 365 | 2.22e-28 | 112 |
MS.gene45082.t1 | AT5G45370 | 29.960 | 247 | 156 | 5 | 40 | 270 | 120 | 365 | 2.22e-28 | 112 |
MS.gene45082.t1 | AT1G68170 | 30.522 | 249 | 160 | 3 | 39 | 281 | 112 | 353 | 4.62e-28 | 111 |
MS.gene45082.t1 | AT1G68170 | 30.522 | 249 | 160 | 3 | 39 | 281 | 102 | 343 | 4.74e-28 | 110 |
MS.gene45082.t1 | AT3G53210 | 27.386 | 241 | 165 | 3 | 38 | 271 | 51 | 288 | 5.84e-28 | 109 |
MS.gene45082.t1 | AT2G37450 | 31.855 | 248 | 162 | 3 | 36 | 280 | 12 | 255 | 1.22e-27 | 107 |
MS.gene45082.t1 | AT3G45870 | 29.911 | 224 | 145 | 3 | 40 | 252 | 112 | 334 | 1.37e-27 | 110 |
MS.gene45082.t1 | AT3G53210 | 27.386 | 241 | 165 | 3 | 38 | 271 | 108 | 345 | 2.05e-27 | 109 |
MS.gene45082.t1 | AT1G01070 | 29.583 | 240 | 155 | 5 | 36 | 268 | 65 | 297 | 4.99e-27 | 107 |
MS.gene45082.t1 | AT4G01440 | 27.723 | 202 | 146 | 0 | 37 | 238 | 107 | 308 | 5.87e-27 | 107 |
MS.gene45082.t1 | AT1G01070 | 29.583 | 240 | 155 | 5 | 36 | 268 | 112 | 344 | 7.66e-27 | 107 |
MS.gene45082.t1 | AT2G37450 | 31.855 | 248 | 162 | 3 | 36 | 280 | 84 | 327 | 7.90e-27 | 107 |
MS.gene45082.t1 | AT4G01430 | 27.273 | 242 | 170 | 4 | 34 | 270 | 103 | 343 | 8.14e-27 | 107 |
MS.gene45082.t1 | AT1G25270 | 30.000 | 250 | 157 | 6 | 41 | 281 | 104 | 344 | 1.08e-26 | 107 |
MS.gene45082.t1 | AT5G45370 | 27.465 | 284 | 181 | 8 | 3 | 270 | 31 | 305 | 4.13e-24 | 99.8 |
MS.gene45082.t1 | AT3G45870 | 27.982 | 218 | 145 | 3 | 46 | 252 | 43 | 259 | 5.87e-24 | 99.0 |
MS.gene45082.t1 | AT2G37450 | 29.329 | 283 | 179 | 5 | 12 | 280 | 13 | 288 | 1.12e-23 | 98.2 |
MS.gene45082.t1 | AT1G11450 | 26.457 | 223 | 162 | 2 | 36 | 257 | 20 | 241 | 1.12e-23 | 97.4 |
MS.gene45082.t1 | AT1G11450 | 26.457 | 223 | 162 | 2 | 36 | 257 | 61 | 282 | 3.56e-23 | 96.7 |
MS.gene45082.t1 | AT1G11450 | 26.457 | 223 | 162 | 2 | 36 | 257 | 68 | 289 | 4.01e-23 | 96.7 |
MS.gene45082.t1 | AT1G11450 | 26.457 | 223 | 162 | 2 | 36 | 257 | 112 | 333 | 4.66e-23 | 97.4 |
MS.gene45082.t1 | AT1G11460 | 25.112 | 223 | 166 | 1 | 36 | 257 | 112 | 334 | 4.81e-22 | 94.4 |
MS.gene45082.t1 | AT5G47470 | 26.471 | 272 | 181 | 5 | 17 | 275 | 99 | 364 | 5.71e-22 | 94.4 |
MS.gene45082.t1 | AT5G47470 | 26.471 | 272 | 181 | 5 | 17 | 275 | 127 | 392 | 6.32e-22 | 94.7 |
MS.gene45082.t1 | AT3G45870 | 27.751 | 209 | 139 | 3 | 40 | 237 | 112 | 319 | 1.47e-21 | 92.8 |
MS.gene45082.t1 | AT3G30340 | 34.416 | 154 | 94 | 2 | 38 | 187 | 109 | 259 | 1.09e-20 | 89.7 |
MS.gene45082.t1 | AT5G47470 | 25.385 | 260 | 177 | 4 | 17 | 265 | 127 | 380 | 1.51e-20 | 90.5 |
MS.gene45082.t1 | AT4G08290 | 33.987 | 153 | 97 | 2 | 36 | 185 | 109 | 260 | 1.57e-20 | 89.4 |
MS.gene45082.t1 | AT1G60050 | 25.664 | 226 | 159 | 3 | 41 | 258 | 117 | 341 | 2.62e-20 | 89.7 |
MS.gene45082.t1 | AT4G01430 | 25.121 | 207 | 150 | 3 | 68 | 270 | 1 | 206 | 5.13e-20 | 86.7 |
MS.gene45082.t1 | AT4G01430 | 27.053 | 207 | 145 | 4 | 34 | 235 | 103 | 308 | 6.22e-19 | 85.5 |
MS.gene45082.t1 | AT3G28060 | 37.815 | 119 | 58 | 5 | 125 | 235 | 44 | 154 | 7.77e-19 | 81.6 |
MS.gene45082.t1 | AT3G28100 | 35.669 | 157 | 86 | 3 | 36 | 183 | 110 | 260 | 1.03e-18 | 84.0 |
MS.gene45082.t1 | AT3G45870 | 25.000 | 228 | 156 | 4 | 21 | 237 | 21 | 244 | 1.09e-17 | 80.9 |
MS.gene45082.t1 | AT3G45870 | 25.000 | 228 | 156 | 4 | 21 | 237 | 21 | 244 | 1.09e-17 | 80.9 |
MS.gene45082.t1 | AT4G01440 | 28.477 | 151 | 108 | 0 | 37 | 187 | 107 | 257 | 4.35e-17 | 79.3 |
MS.gene45082.t1 | AT3G28130 | 34.000 | 150 | 96 | 2 | 36 | 182 | 109 | 258 | 6.69e-17 | 79.0 |
MS.gene45082.t1 | AT3G45870 | 28.188 | 149 | 106 | 1 | 104 | 252 | 36 | 183 | 1.49e-16 | 77.4 |
MS.gene45082.t1 | AT4G01450 | 28.311 | 219 | 153 | 1 | 39 | 257 | 109 | 323 | 2.01e-16 | 78.6 |
MS.gene45082.t1 | AT1G11450 | 25.373 | 201 | 148 | 2 | 36 | 235 | 112 | 311 | 2.98e-16 | 77.8 |
MS.gene45082.t1 | AT4G01450 | 27.411 | 197 | 139 | 1 | 39 | 235 | 109 | 301 | 1.15e-15 | 76.3 |
MS.gene45082.t1 | AT1G43650 | 30.519 | 154 | 102 | 2 | 40 | 192 | 107 | 256 | 3.15e-15 | 74.3 |
MS.gene45082.t1 | AT3G53210 | 27.922 | 154 | 104 | 2 | 38 | 187 | 108 | 258 | 1.35e-13 | 69.7 |
MS.gene45082.t1 | AT4G01450 | 29.114 | 158 | 105 | 2 | 39 | 193 | 109 | 262 | 1.75e-13 | 69.3 |
MS.gene45082.t1 | AT3G28130 | 40.952 | 105 | 60 | 1 | 36 | 138 | 109 | 213 | 5.57e-12 | 64.3 |
MS.gene45082.t1 | AT5G64700 | 26.490 | 151 | 104 | 1 | 41 | 184 | 109 | 259 | 7.56e-12 | 64.7 |
MS.gene45082.t1 | AT3G28100 | 41.667 | 108 | 49 | 2 | 36 | 135 | 110 | 211 | 8.13e-12 | 64.3 |
MS.gene45082.t1 | AT3G45870 | 26.752 | 157 | 103 | 3 | 40 | 185 | 112 | 267 | 1.72e-11 | 63.5 |
Find 44 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGAAATCAGATTGGATAAT+TGG | 0.197562 | 5.3:+23893166 | MS.gene45082:CDS |
ACTTATTGGTGCAGCATTAT+TGG | 0.203191 | 5.3:+23894432 | MS.gene45082:intron |
TCCAATCTGATTTCCCTAAA+AGG | 0.218236 | 5.3:-23893159 | None:intergenic |
GGAGCTGCTATCATAGTTAT+TGG | 0.234600 | 5.3:+23894453 | MS.gene45082:CDS |
AGTGCAATGACCACTCTTAA+AGG | 0.236929 | 5.3:-23894272 | None:intergenic |
GTGTTTATCACTAGCTCTTC+TGG | 0.247926 | 5.3:-23893648 | None:intergenic |
ATAGCAAGTATGAAGGTAAA+AGG | 0.300566 | 5.3:-23885301 | None:intergenic |
GGCACAGTGGTCTCTATTGC+AGG | 0.308068 | 5.3:+23893052 | MS.gene45082:CDS |
AGCAGCCAGGCAAAAGTTAT+TGG | 0.314638 | 5.3:+23893031 | MS.gene45082:CDS |
TTGAACATAGCTACATATAT+TGG | 0.334507 | 5.3:-23894248 | None:intergenic |
AAACAAAAGCATGGATATAT+AGG | 0.382758 | 5.3:+23894563 | MS.gene45082:CDS |
TCATACTTGCTATAATTTCA+AGG | 0.384041 | 5.3:+23885311 | MS.gene45082:CDS |
TTGGGAGACAATCTTTATCT+TGG | 0.387204 | 5.3:+23894314 | MS.gene45082:CDS |
ATATACAGACTTGGATTGTC+AGG | 0.424821 | 5.3:+23893619 | MS.gene45082:intron |
ACAGATAGCAACTCTTTATC+AGG | 0.429389 | 5.3:-23893753 | None:intergenic |
ATGAAAGCAGCCACAAAAGA+TGG | 0.452927 | 5.3:+23884960 | MS.gene45082:CDS |
CAGAGGGAAATTCAAATGCT+TGG | 0.454003 | 5.3:+23893721 | MS.gene45082:CDS |
TTATTGGCATCATTAATCAA+TGG | 0.483388 | 5.3:-23893106 | None:intergenic |
TACCACAAAACAGCAACAAA+TGG | 0.500109 | 5.3:-23893670 | None:intergenic |
TGAAATTATAGCAAGTATGA+AGG | 0.526932 | 5.3:-23885308 | None:intergenic |
AGTGGTCATTGCACTTAGCA+TGG | 0.527230 | 5.3:+23894280 | MS.gene45082:CDS |
AATATAGAAATGGGAGCAAG+TGG | 0.531385 | 5.3:+23893130 | MS.gene45082:CDS |
GAGACAATCTTTATCTTGGA+AGG | 0.532255 | 5.3:+23894318 | MS.gene45082:CDS |
GTGGTCATTGCACTTAGCAT+GGG | 0.547313 | 5.3:+23894281 | MS.gene45082:CDS |
CTCTGCAATGAGAGCTACAA+TGG | 0.554415 | 5.3:-23893703 | None:intergenic |
TCTATTGTCAAACAAAAGCA+TGG | 0.559816 | 5.3:+23894554 | MS.gene45082:CDS |
ACATGGGCATGTCGTAAGAA+AGG | 0.565963 | 5.3:+23894224 | MS.gene45082:CDS |
GCACAGTGGTCTCTATTGCA+GGG | 0.571242 | 5.3:+23893053 | MS.gene45082:CDS |
CACAGTGGTCTCTATTGCAG+GGG | 0.584216 | 5.3:+23893054 | MS.gene45082:CDS |
TGCAGCTCAAATTGTTGAAG+TGG | 0.587755 | 5.3:+23884923 | MS.gene45082:CDS |
TATACAGACTTGGATTGTCA+GGG | 0.590593 | 5.3:+23893620 | MS.gene45082:intron |
TATGTTCAAACCTTTAAGAG+TGG | 0.597273 | 5.3:+23894262 | MS.gene45082:CDS |
TGAAGAATGTTATACTCACA+TGG | 0.605157 | 5.3:+23894207 | MS.gene45082:CDS |
GCAAGTATGAAGGTAAAAGG+AGG | 0.605835 | 5.3:-23885298 | None:intergenic |
ATTGTAGCTCTCATTGCAGA+GGG | 0.608307 | 5.3:+23893705 | MS.gene45082:CDS |
GATATGGGCACAAGCTCAAG+AGG | 0.617122 | 5.3:+23894488 | MS.gene45082:CDS |
TGGTCATTGCACTTAGCATG+GGG | 0.620952 | 5.3:+23894282 | MS.gene45082:CDS |
CAAGTATGAAGGTAAAAGGA+GGG | 0.622141 | 5.3:-23885297 | None:intergenic |
GCAGCTCAAATTGTTGAAGT+GGG | 0.628887 | 5.3:+23884924 | MS.gene45082:CDS |
CATTGTAGCTCTCATTGCAG+AGG | 0.632723 | 5.3:+23893704 | MS.gene45082:CDS |
GAAGAATGTTATACTCACAT+GGG | 0.641061 | 5.3:+23894208 | MS.gene45082:CDS |
GGCAAAAGTTATTGGCACAG+TGG | 0.705210 | 5.3:+23893039 | MS.gene45082:CDS |
GCTCAAATTGTTGAAGTGGG+TGG | 0.711164 | 5.3:+23884927 | MS.gene45082:CDS |
GGTCATTGCACTTAGCATGG+GGG | 0.733530 | 5.3:+23894283 | MS.gene45082:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 23884885 | 23894584 | 23884885 | ID=MS.gene45082 |
chr5.3 | mRNA | 23884885 | 23894584 | 23884885 | ID=MS.gene45082.t1;Parent=MS.gene45082 |
chr5.3 | exon | 23884885 | 23884987 | 23884885 | ID=MS.gene45082.t1.exon1;Parent=MS.gene45082.t1 |
chr5.3 | CDS | 23884885 | 23884987 | 23884885 | ID=cds.MS.gene45082.t1;Parent=MS.gene45082.t1 |
chr5.3 | exon | 23885281 | 23885332 | 23885281 | ID=MS.gene45082.t1.exon2;Parent=MS.gene45082.t1 |
chr5.3 | CDS | 23885281 | 23885332 | 23885281 | ID=cds.MS.gene45082.t1;Parent=MS.gene45082.t1 |
chr5.3 | exon | 23893003 | 23893243 | 23893003 | ID=MS.gene45082.t1.exon3;Parent=MS.gene45082.t1 |
chr5.3 | CDS | 23893003 | 23893243 | 23893003 | ID=cds.MS.gene45082.t1;Parent=MS.gene45082.t1 |
chr5.3 | exon | 23893627 | 23893785 | 23893627 | ID=MS.gene45082.t1.exon4;Parent=MS.gene45082.t1 |
chr5.3 | CDS | 23893627 | 23893785 | 23893627 | ID=cds.MS.gene45082.t1;Parent=MS.gene45082.t1 |
chr5.3 | exon | 23894188 | 23894339 | 23894188 | ID=MS.gene45082.t1.exon5;Parent=MS.gene45082.t1 |
chr5.3 | CDS | 23894188 | 23894339 | 23894188 | ID=cds.MS.gene45082.t1;Parent=MS.gene45082.t1 |
chr5.3 | exon | 23894446 | 23894584 | 23894446 | ID=MS.gene45082.t1.exon6;Parent=MS.gene45082.t1 |
chr5.3 | CDS | 23894446 | 23894584 | 23894446 | ID=cds.MS.gene45082.t1;Parent=MS.gene45082.t1 |
Gene Sequence |
Protein sequence |