Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45091.t1 | AES96263.2 | 96 | 321 | 13 | 0 | 1 | 321 | 114 | 434 | 4.70E-189 | 670.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45091.t1 | O04523 | 58.2 | 318 | 117 | 5 | 3 | 318 | 112 | 415 | 9.5e-114 | 411.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45091.t1 | G7K2T7 | 96.0 | 321 | 13 | 0 | 1 | 321 | 114 | 434 | 3.4e-189 | 670.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene45091 | MS.gene048911 | PPI |
MS.gene45091 | MS.gene55781 | PPI |
MS.gene06056 | MS.gene45091 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45091.t1 | MTR_5g035090 | 95.950 | 321 | 13 | 0 | 1 | 321 | 114 | 434 | 0.0 | 654 |
MS.gene45091.t1 | MTR_5g035070 | 77.370 | 327 | 72 | 2 | 1 | 325 | 118 | 444 | 0.0 | 525 |
MS.gene45091.t1 | MTR_5g035150 | 70.625 | 320 | 92 | 2 | 1 | 318 | 116 | 435 | 5.21e-170 | 479 |
MS.gene45091.t1 | MTR_5g035080 | 66.265 | 332 | 101 | 5 | 1 | 325 | 106 | 433 | 1.38e-157 | 448 |
MS.gene45091.t1 | MTR_3g109840 | 62.462 | 325 | 113 | 4 | 1 | 321 | 103 | 422 | 7.68e-152 | 433 |
MS.gene45091.t1 | MTR_8g104970 | 60.625 | 320 | 117 | 5 | 1 | 315 | 151 | 466 | 1.46e-140 | 406 |
MS.gene45091.t1 | MTR_7g033230 | 57.944 | 321 | 126 | 5 | 1 | 316 | 295 | 611 | 1.99e-134 | 395 |
MS.gene45091.t1 | MTR_7g033230 | 57.944 | 321 | 126 | 5 | 1 | 316 | 365 | 681 | 1.40e-133 | 395 |
MS.gene45091.t1 | MTR_5g035140 | 61.887 | 265 | 92 | 5 | 57 | 316 | 7 | 267 | 6.28e-120 | 346 |
MS.gene45091.t1 | MTR_6g016880 | 41.742 | 333 | 175 | 9 | 1 | 325 | 109 | 430 | 7.12e-90 | 275 |
MS.gene45091.t1 | MTR_8g027900 | 43.125 | 320 | 170 | 7 | 1 | 314 | 242 | 555 | 3.98e-88 | 275 |
MS.gene45091.t1 | MTR_7g019120 | 39.577 | 331 | 183 | 9 | 1 | 325 | 110 | 429 | 2.20e-84 | 261 |
MS.gene45091.t1 | MTR_8g099300 | 42.056 | 321 | 173 | 8 | 1 | 314 | 105 | 419 | 7.70e-84 | 259 |
MS.gene45091.t1 | MTR_6g007777 | 38.769 | 325 | 185 | 7 | 3 | 322 | 150 | 465 | 8.38e-79 | 248 |
MS.gene45091.t1 | MTR_2g016060 | 38.906 | 329 | 177 | 11 | 1 | 316 | 85 | 402 | 3.61e-74 | 234 |
MS.gene45091.t1 | MTR_6g016875 | 40.248 | 323 | 177 | 9 | 1 | 315 | 95 | 409 | 1.04e-73 | 233 |
MS.gene45091.t1 | MTR_1g076690 | 36.858 | 331 | 178 | 11 | 3 | 316 | 256 | 572 | 7.97e-60 | 201 |
MS.gene45091.t1 | MTR_6g061710 | 34.940 | 332 | 183 | 10 | 3 | 316 | 200 | 516 | 4.69e-56 | 190 |
MS.gene45091.t1 | MTR_7g094750 | 31.722 | 331 | 189 | 15 | 3 | 316 | 124 | 434 | 4.06e-41 | 149 |
MS.gene45091.t1 | MTR_2g022560 | 33.433 | 335 | 181 | 14 | 3 | 318 | 130 | 441 | 6.41e-41 | 148 |
MS.gene45091.t1 | MTR_1g058380 | 31.611 | 329 | 189 | 12 | 3 | 316 | 90 | 397 | 2.84e-40 | 145 |
MS.gene45091.t1 | MTR_5g071350 | 30.218 | 321 | 195 | 11 | 3 | 310 | 91 | 395 | 1.19e-35 | 133 |
MS.gene45091.t1 | MTR_4g126950 | 32.523 | 329 | 181 | 14 | 3 | 314 | 142 | 446 | 1.24e-35 | 134 |
MS.gene45091.t1 | MTR_0136s0010 | 32.440 | 336 | 183 | 16 | 1 | 316 | 201 | 512 | 1.75e-35 | 135 |
MS.gene45091.t1 | MTR_4g121560 | 28.743 | 334 | 188 | 12 | 3 | 314 | 148 | 453 | 1.86e-35 | 134 |
MS.gene45091.t1 | MTR_4g125060 | 31.832 | 333 | 175 | 13 | 5 | 314 | 168 | 471 | 8.92e-35 | 132 |
MS.gene45091.t1 | MTR_4g125060 | 31.707 | 328 | 182 | 12 | 5 | 314 | 207 | 510 | 9.67e-35 | 132 |
MS.gene45091.t1 | MTR_8g093530 | 30.769 | 338 | 188 | 13 | 1 | 324 | 121 | 426 | 1.11e-34 | 131 |
MS.gene45091.t1 | MTR_4g125060 | 31.832 | 333 | 175 | 13 | 5 | 314 | 236 | 539 | 1.30e-34 | 132 |
MS.gene45091.t1 | MTR_8g069790 | 29.730 | 333 | 192 | 14 | 3 | 317 | 211 | 519 | 1.32e-34 | 132 |
MS.gene45091.t1 | MTR_4g014440 | 30.699 | 329 | 192 | 12 | 4 | 314 | 97 | 407 | 3.29e-34 | 129 |
MS.gene45091.t1 | MTR_3g464570 | 31.776 | 321 | 180 | 14 | 4 | 310 | 77 | 372 | 5.00e-34 | 128 |
MS.gene45091.t1 | MTR_5g033800 | 28.614 | 332 | 195 | 12 | 3 | 316 | 178 | 485 | 1.56e-33 | 129 |
MS.gene45091.t1 | MTR_7g093450 | 31.193 | 327 | 186 | 13 | 1 | 310 | 279 | 583 | 1.07e-32 | 127 |
MS.gene45091.t1 | MTR_7g070060 | 29.697 | 330 | 196 | 13 | 3 | 314 | 98 | 409 | 8.10e-32 | 123 |
MS.gene45091.t1 | MTR_4g016940 | 29.630 | 324 | 204 | 10 | 1 | 314 | 118 | 427 | 1.06e-31 | 123 |
MS.gene45091.t1 | MTR_7g068920 | 30.462 | 325 | 200 | 12 | 1 | 314 | 112 | 421 | 1.87e-31 | 122 |
MS.gene45091.t1 | MTR_4g087730 | 31.190 | 311 | 179 | 12 | 4 | 310 | 79 | 358 | 1.07e-30 | 119 |
MS.gene45091.t1 | MTR_8g093870 | 27.811 | 338 | 182 | 13 | 5 | 314 | 169 | 472 | 4.47e-30 | 119 |
MS.gene45091.t1 | MTR_5g059400 | 28.863 | 343 | 200 | 15 | 3 | 323 | 208 | 528 | 4.48e-30 | 120 |
MS.gene45091.t1 | MTR_1g116130 | 28.863 | 343 | 200 | 15 | 3 | 323 | 208 | 528 | 4.48e-30 | 120 |
MS.gene45091.t1 | MTR_7g109550 | 30.189 | 318 | 190 | 14 | 3 | 311 | 170 | 464 | 6.21e-30 | 119 |
MS.gene45091.t1 | MTR_3g090120 | 29.518 | 332 | 190 | 11 | 1 | 319 | 164 | 464 | 6.93e-30 | 119 |
MS.gene45091.t1 | MTR_2g091175 | 31.511 | 311 | 179 | 14 | 3 | 310 | 83 | 362 | 1.15e-29 | 116 |
MS.gene45091.t1 | MTR_4g088030 | 30.868 | 311 | 180 | 12 | 4 | 310 | 67 | 346 | 1.35e-29 | 116 |
MS.gene45091.t1 | MTR_3g070900 | 28.529 | 333 | 190 | 14 | 1 | 310 | 138 | 445 | 1.64e-29 | 117 |
MS.gene45091.t1 | MTR_3g021060 | 29.231 | 325 | 185 | 14 | 1 | 316 | 77 | 365 | 5.64e-29 | 114 |
MS.gene45091.t1 | MTR_8g463790 | 26.048 | 334 | 204 | 8 | 1 | 316 | 103 | 411 | 6.32e-29 | 115 |
MS.gene45091.t1 | MTR_5g083260 | 26.875 | 320 | 208 | 10 | 3 | 311 | 117 | 421 | 9.55e-28 | 112 |
MS.gene45091.t1 | MTR_1g050448 | 29.375 | 320 | 189 | 13 | 3 | 314 | 85 | 375 | 9.95e-28 | 111 |
MS.gene45091.t1 | MTR_2g073510 | 28.165 | 316 | 196 | 11 | 2 | 314 | 66 | 353 | 4.15e-27 | 109 |
MS.gene45091.t1 | MTR_3g035830 | 28.571 | 322 | 187 | 11 | 1 | 314 | 62 | 348 | 7.88e-27 | 108 |
MS.gene45091.t1 | MTR_3g071650 | 28.395 | 324 | 198 | 13 | 3 | 311 | 123 | 427 | 1.70e-26 | 108 |
MS.gene45091.t1 | MTR_2g015720 | 29.260 | 311 | 187 | 11 | 3 | 310 | 74 | 354 | 1.93e-26 | 107 |
MS.gene45091.t1 | MTR_6g016240 | 27.301 | 326 | 193 | 11 | 9 | 312 | 111 | 414 | 2.40e-26 | 108 |
MS.gene45091.t1 | MTR_1g112210 | 27.103 | 321 | 188 | 12 | 3 | 310 | 91 | 378 | 2.92e-26 | 107 |
MS.gene45091.t1 | MTR_3g049330 | 27.885 | 312 | 192 | 8 | 3 | 310 | 64 | 346 | 9.66e-26 | 105 |
MS.gene45091.t1 | MTR_3g021090 | 29.358 | 327 | 170 | 14 | 1 | 310 | 62 | 344 | 1.39e-25 | 106 |
MS.gene45091.t1 | MTR_7g094750 | 33.486 | 218 | 120 | 9 | 3 | 206 | 124 | 330 | 1.82e-25 | 104 |
MS.gene45091.t1 | MTR_1g112210 | 26.332 | 319 | 180 | 12 | 3 | 310 | 91 | 365 | 4.82e-25 | 103 |
MS.gene45091.t1 | MTR_2g073500 | 28.115 | 313 | 185 | 11 | 1 | 310 | 66 | 341 | 1.90e-24 | 102 |
MS.gene45091.t1 | MTR_4g079700 | 29.338 | 317 | 186 | 14 | 3 | 314 | 80 | 363 | 4.92e-24 | 101 |
MS.gene45091.t1 | MTR_1g111010 | 28.254 | 315 | 187 | 11 | 1 | 314 | 65 | 341 | 2.25e-23 | 99.0 |
MS.gene45091.t1 | MTR_5g034810 | 27.974 | 311 | 191 | 11 | 4 | 310 | 67 | 348 | 2.40e-23 | 99.0 |
MS.gene45091.t1 | MTR_4g102570 | 44.355 | 124 | 55 | 5 | 86 | 202 | 2 | 118 | 2.91e-23 | 94.4 |
MS.gene45091.t1 | MTR_5g082880 | 26.254 | 339 | 206 | 13 | 1 | 316 | 197 | 514 | 2.61e-22 | 97.4 |
MS.gene45091.t1 | MTR_5g035120 | 66.667 | 60 | 20 | 0 | 1 | 60 | 106 | 165 | 3.44e-22 | 92.0 |
MS.gene45091.t1 | MTR_7g070060 | 28.296 | 311 | 187 | 13 | 22 | 314 | 15 | 307 | 5.87e-22 | 94.4 |
MS.gene45091.t1 | MTR_4g014430 | 25.758 | 330 | 202 | 12 | 3 | 314 | 142 | 446 | 6.33e-22 | 96.3 |
MS.gene45091.t1 | MTR_4g092830 | 24.848 | 330 | 191 | 11 | 13 | 314 | 92 | 392 | 8.50e-22 | 95.5 |
MS.gene45091.t1 | MTR_3g464570 | 29.655 | 290 | 165 | 14 | 35 | 310 | 4 | 268 | 1.36e-21 | 92.8 |
MS.gene45091.t1 | MTR_7g117160 | 31.797 | 217 | 92 | 8 | 97 | 313 | 29 | 189 | 1.34e-20 | 88.2 |
MS.gene45091.t1 | MTR_5g033800 | 31.183 | 186 | 105 | 6 | 3 | 175 | 178 | 353 | 1.96e-20 | 91.3 |
MS.gene45091.t1 | MTR_7g019140 | 54.237 | 59 | 27 | 0 | 1 | 59 | 110 | 168 | 2.86e-19 | 84.0 |
MS.gene45091.t1 | MTR_7g019130 | 32.031 | 128 | 78 | 4 | 88 | 209 | 1 | 125 | 1.04e-17 | 79.0 |
MS.gene45091.t1 | MTR_7g070060 | 34.228 | 149 | 85 | 5 | 3 | 143 | 98 | 241 | 2.29e-17 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45091.t1 | AT1G70230 | 58.176 | 318 | 117 | 5 | 3 | 318 | 112 | 415 | 3.37e-138 | 398 |
MS.gene45091.t1 | AT1G01430 | 41.088 | 331 | 181 | 7 | 1 | 322 | 130 | 455 | 8.29e-86 | 266 |
MS.gene45091.t1 | AT4G01080 | 43.077 | 325 | 170 | 10 | 1 | 320 | 122 | 436 | 5.11e-85 | 263 |
MS.gene45091.t1 | AT5G15890 | 42.587 | 317 | 169 | 7 | 1 | 315 | 218 | 523 | 6.90e-85 | 265 |
MS.gene45091.t1 | AT4G23790 | 41.615 | 322 | 175 | 8 | 1 | 314 | 111 | 427 | 1.30e-81 | 254 |
MS.gene45091.t1 | AT5G15900 | 39.634 | 328 | 180 | 10 | 1 | 320 | 98 | 415 | 1.71e-81 | 253 |
MS.gene45091.t1 | AT5G15900 | 39.634 | 328 | 180 | 10 | 1 | 320 | 117 | 434 | 3.26e-81 | 253 |
MS.gene45091.t1 | AT3G02440 | 39.564 | 321 | 179 | 7 | 1 | 315 | 158 | 469 | 1.18e-80 | 253 |
MS.gene45091.t1 | AT3G02440 | 39.564 | 321 | 179 | 7 | 1 | 315 | 166 | 477 | 1.28e-80 | 253 |
MS.gene45091.t1 | AT4G11090 | 42.593 | 324 | 167 | 8 | 1 | 314 | 111 | 425 | 4.36e-80 | 250 |
MS.gene45091.t1 | AT3G28150 | 39.506 | 324 | 176 | 10 | 1 | 316 | 101 | 412 | 4.71e-78 | 244 |
MS.gene45091.t1 | AT4G25360 | 35.976 | 328 | 187 | 9 | 3 | 316 | 208 | 526 | 4.13e-58 | 196 |
MS.gene45091.t1 | AT4G25360 | 35.976 | 328 | 187 | 9 | 3 | 316 | 208 | 526 | 4.13e-58 | 196 |
MS.gene45091.t1 | AT5G51640 | 34.557 | 327 | 194 | 9 | 3 | 316 | 171 | 490 | 6.68e-56 | 189 |
MS.gene45091.t1 | AT5G19160 | 32.432 | 333 | 202 | 10 | 4 | 323 | 133 | 455 | 1.95e-42 | 152 |
MS.gene45091.t1 | AT3G06080 | 33.628 | 339 | 188 | 16 | 4 | 325 | 137 | 455 | 3.31e-42 | 152 |
MS.gene45091.t1 | AT3G11570 | 32.416 | 327 | 180 | 14 | 1 | 310 | 113 | 415 | 1.02e-39 | 145 |
MS.gene45091.t1 | AT5G64020 | 31.250 | 336 | 187 | 13 | 4 | 314 | 92 | 408 | 3.13e-38 | 140 |
MS.gene45091.t1 | AT2G14530 | 30.699 | 329 | 182 | 11 | 8 | 314 | 102 | 406 | 5.51e-37 | 137 |
MS.gene45091.t1 | AT5G06230 | 33.642 | 324 | 176 | 15 | 3 | 310 | 60 | 360 | 1.00e-36 | 135 |
MS.gene45091.t1 | AT3G12060 | 31.098 | 328 | 185 | 14 | 1 | 310 | 227 | 531 | 1.39e-36 | 138 |
MS.gene45091.t1 | AT5G06230 | 33.642 | 324 | 176 | 15 | 3 | 310 | 101 | 401 | 2.60e-36 | 135 |
MS.gene45091.t1 | AT2G30010 | 31.928 | 332 | 182 | 13 | 2 | 314 | 90 | 396 | 4.02e-36 | 134 |
MS.gene45091.t1 | AT2G30010 | 31.928 | 332 | 182 | 13 | 2 | 314 | 133 | 439 | 5.60e-36 | 135 |
MS.gene45091.t1 | AT5G20590 | 32.110 | 327 | 177 | 13 | 3 | 310 | 175 | 475 | 1.28e-35 | 134 |
MS.gene45091.t1 | AT1G48880 | 32.121 | 330 | 166 | 13 | 1 | 311 | 146 | 436 | 3.23e-35 | 133 |
MS.gene45091.t1 | AT5G06700 | 31.563 | 339 | 198 | 17 | 1 | 324 | 286 | 605 | 1.27e-34 | 133 |
MS.gene45091.t1 | AT5G58600 | 30.031 | 323 | 193 | 12 | 3 | 314 | 100 | 400 | 2.02e-33 | 127 |
MS.gene45091.t1 | AT2G37720 | 29.483 | 329 | 184 | 12 | 4 | 311 | 178 | 479 | 2.74e-33 | 128 |
MS.gene45091.t1 | AT5G49340 | 28.267 | 329 | 199 | 11 | 3 | 314 | 133 | 441 | 4.70e-33 | 127 |
MS.gene45091.t1 | AT2G38320 | 28.144 | 334 | 194 | 13 | 4 | 314 | 11 | 321 | 1.41e-32 | 123 |
MS.gene45091.t1 | AT1G60790 | 28.446 | 341 | 187 | 14 | 2 | 315 | 224 | 534 | 1.78e-32 | 127 |
MS.gene45091.t1 | AT2G38320 | 28.144 | 334 | 194 | 13 | 4 | 314 | 94 | 404 | 7.84e-32 | 123 |
MS.gene45091.t1 | AT3G14850 | 28.115 | 313 | 191 | 10 | 3 | 310 | 67 | 350 | 2.45e-30 | 118 |
MS.gene45091.t1 | AT2G40160 | 27.485 | 342 | 194 | 14 | 3 | 316 | 111 | 426 | 2.64e-30 | 119 |
MS.gene45091.t1 | AT2G40160 | 26.866 | 335 | 192 | 13 | 3 | 310 | 111 | 419 | 4.02e-30 | 119 |
MS.gene45091.t1 | AT5G01360 | 27.660 | 329 | 199 | 13 | 1 | 311 | 68 | 375 | 6.16e-30 | 117 |
MS.gene45091.t1 | AT3G11030 | 26.911 | 327 | 202 | 10 | 2 | 311 | 139 | 445 | 1.15e-29 | 118 |
MS.gene45091.t1 | AT5G01360 | 27.928 | 333 | 193 | 14 | 1 | 311 | 124 | 431 | 1.82e-29 | 117 |
MS.gene45091.t1 | AT3G62390 | 28.788 | 330 | 195 | 14 | 2 | 316 | 170 | 474 | 4.68e-29 | 116 |
MS.gene45091.t1 | AT1G73140 | 28.571 | 329 | 186 | 14 | 3 | 310 | 101 | 401 | 7.32e-29 | 115 |
MS.gene45091.t1 | AT2G30900 | 28.617 | 311 | 196 | 8 | 2 | 310 | 75 | 361 | 9.56e-29 | 114 |
MS.gene45091.t1 | AT2G31110 | 29.747 | 316 | 177 | 16 | 4 | 310 | 79 | 358 | 1.03e-28 | 114 |
MS.gene45091.t1 | AT5G64470 | 29.193 | 322 | 181 | 12 | 13 | 314 | 100 | 394 | 3.33e-28 | 113 |
MS.gene45091.t1 | AT2G42570 | 29.907 | 321 | 180 | 16 | 3 | 314 | 80 | 364 | 3.41e-28 | 112 |
MS.gene45091.t1 | AT2G40320 | 28.487 | 337 | 181 | 17 | 3 | 311 | 115 | 419 | 3.76e-28 | 113 |
MS.gene45091.t1 | AT2G34070 | 28.076 | 317 | 196 | 12 | 1 | 314 | 96 | 383 | 3.79e-28 | 112 |
MS.gene45091.t1 | AT5G20680 | 28.659 | 328 | 192 | 12 | 5 | 314 | 154 | 457 | 1.35e-27 | 112 |
MS.gene45091.t1 | AT3G55990 | 28.190 | 337 | 199 | 13 | 1 | 316 | 172 | 486 | 2.63e-27 | 111 |
MS.gene45091.t1 | AT5G20680 | 28.659 | 328 | 192 | 12 | 5 | 314 | 230 | 533 | 3.62e-27 | 111 |
MS.gene45091.t1 | AT5G20680 | 28.659 | 328 | 192 | 12 | 5 | 314 | 248 | 551 | 3.80e-27 | 111 |
MS.gene45091.t1 | AT5G20680 | 28.659 | 328 | 192 | 12 | 5 | 314 | 248 | 551 | 3.80e-27 | 111 |
MS.gene45091.t1 | AT5G20680 | 28.659 | 328 | 192 | 12 | 5 | 314 | 248 | 551 | 3.80e-27 | 111 |
MS.gene45091.t1 | AT5G20680 | 28.659 | 328 | 192 | 12 | 5 | 314 | 248 | 551 | 3.80e-27 | 111 |
MS.gene45091.t1 | AT1G29050 | 29.102 | 323 | 184 | 12 | 1 | 314 | 92 | 378 | 1.04e-26 | 108 |
MS.gene45091.t1 | AT5G64470 | 28.659 | 328 | 181 | 13 | 13 | 314 | 100 | 400 | 1.33e-26 | 108 |
MS.gene45091.t1 | AT1G78710 | 29.375 | 320 | 183 | 13 | 4 | 314 | 71 | 356 | 1.13e-25 | 105 |
MS.gene45091.t1 | AT5G19160 | 34.286 | 210 | 121 | 7 | 4 | 203 | 133 | 335 | 2.47e-25 | 104 |
MS.gene45091.t1 | AT2G40150 | 26.879 | 346 | 198 | 15 | 1 | 316 | 103 | 423 | 2.32e-24 | 102 |
MS.gene45091.t1 | AT5G01620 | 25.305 | 328 | 206 | 12 | 3 | 314 | 145 | 449 | 9.72e-24 | 101 |
MS.gene45091.t1 | AT5G01620 | 25.305 | 328 | 206 | 12 | 3 | 314 | 145 | 449 | 9.72e-24 | 101 |
MS.gene45091.t1 | AT5G01620 | 25.305 | 328 | 206 | 12 | 3 | 314 | 153 | 457 | 1.11e-23 | 101 |
MS.gene45091.t1 | AT3G06080 | 34.272 | 213 | 119 | 9 | 4 | 204 | 137 | 340 | 1.23e-23 | 99.8 |
MS.gene45091.t1 | AT3G54260 | 26.748 | 329 | 187 | 15 | 3 | 314 | 83 | 374 | 1.64e-23 | 100 |
MS.gene45091.t1 | AT5G06230 | 33.953 | 215 | 119 | 11 | 3 | 204 | 101 | 305 | 2.06e-21 | 93.2 |
MS.gene45091.t1 | AT5G58600 | 31.373 | 204 | 122 | 7 | 3 | 202 | 100 | 289 | 7.89e-21 | 90.9 |
MS.gene45091.t1 | AT5G20590 | 32.620 | 187 | 102 | 6 | 3 | 175 | 175 | 351 | 8.00e-21 | 92.4 |
MS.gene45091.t1 | AT2G40160 | 30.319 | 188 | 103 | 5 | 3 | 175 | 111 | 285 | 1.98e-19 | 87.4 |
MS.gene45091.t1 | AT2G31110 | 33.333 | 168 | 94 | 6 | 4 | 159 | 79 | 240 | 1.71e-17 | 81.3 |
MS.gene45091.t1 | AT3G62390 | 28.111 | 217 | 131 | 8 | 2 | 205 | 170 | 374 | 1.99e-17 | 82.8 |
MS.gene45091.t1 | AT3G14850 | 25.455 | 275 | 171 | 10 | 41 | 310 | 2 | 247 | 1.06e-16 | 79.0 |
MS.gene45091.t1 | AT2G30900 | 31.788 | 151 | 97 | 3 | 2 | 151 | 75 | 220 | 2.21e-16 | 78.2 |
MS.gene45091.t1 | AT1G78710 | 41.489 | 94 | 54 | 1 | 4 | 97 | 64 | 156 | 6.22e-14 | 71.6 |
MS.gene45091.t1 | AT5G64470 | 26.957 | 230 | 138 | 9 | 13 | 225 | 100 | 316 | 2.86e-12 | 67.0 |
MS.gene45091.t1 | AT5G64470 | 27.803 | 223 | 131 | 9 | 13 | 218 | 100 | 309 | 4.85e-12 | 66.2 |
Find 67 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTCTTAATTACACTGAAAT+AGG | 0.136015 | 5.3:-24010288 | MS.gene45091:CDS |
TTCAAATATAGCTCATTATT+TGG | 0.139372 | 5.3:+24010438 | None:intergenic |
TCCTATCAATTATGCTATTA+AGG | 0.141791 | 5.3:+24010229 | None:intergenic |
ATGTATTAAGAAAGGCTTTA+AGG | 0.169604 | 5.3:-24010257 | MS.gene45091:CDS |
ATTGATTGTCCTTGCCATTT+TGG | 0.188794 | 5.3:+24010553 | None:intergenic |
AGTATTGGATGTAACAAAAT+TGG | 0.211311 | 5.3:-24009986 | MS.gene45091:CDS |
TTTCTATAAGGCTTAGTCTT+TGG | 0.240548 | 5.3:+24010117 | None:intergenic |
AATTGATAGGAGAGGGAATA+AGG | 0.252392 | 5.3:-24010217 | MS.gene45091:CDS |
TTCTTCTCTCCATTTCTATA+AGG | 0.257035 | 5.3:+24010105 | None:intergenic |
AAAGCCAAAGGCAATGAATT+TGG | 0.260071 | 5.3:-24010024 | MS.gene45091:CDS |
CTTAGTTGGAGAAAAGTAAT+TGG | 0.278320 | 5.3:+24010678 | None:intergenic |
CCTAAACTTGTGTACCAAAA+TGG | 0.283772 | 5.3:-24010567 | MS.gene45091:CDS |
TACAAAGAAGAGACTCTAAT+TGG | 0.322908 | 5.3:+24010610 | None:intergenic |
GTCTTAATTACACTGAAATA+GGG | 0.334111 | 5.3:-24010287 | MS.gene45091:CDS |
CTTTCCAAATTCATTGCCTT+TGG | 0.341956 | 5.3:+24010020 | None:intergenic |
ATTCAACTATTTCCTTGTAT+TGG | 0.358515 | 5.3:-24010503 | MS.gene45091:CDS |
AATGGAAAAGGGTTCATATA+AGG | 0.359801 | 5.3:+24009934 | None:intergenic |
TGTGTTTGTTCTTACTTAGT+TGG | 0.369018 | 5.3:+24010664 | None:intergenic |
TGAATCATGTTGATGAGAAA+TGG | 0.370491 | 5.3:-24010419 | MS.gene45091:CDS |
TGTGTTCATTGGTGTTTGCC+TGG | 0.372187 | 5.3:-24009877 | MS.gene45091:CDS |
AAGACTAAGCCTTATAGAAA+TGG | 0.384572 | 5.3:-24010114 | MS.gene45091:CDS |
GACATGATTGTACTATCAAT+TGG | 0.399358 | 5.3:-24010375 | MS.gene45091:CDS |
CCTATCAATTATGCTATTAA+GGG | 0.403903 | 5.3:+24010230 | None:intergenic |
ACCCCATTAAAGAATGGAAA+AGG | 0.407132 | 5.3:+24009922 | None:intergenic |
AAAGTAATTGGTTCAAACCT+TGG | 0.414515 | 5.3:+24010690 | None:intergenic |
AAAGTTAAGATTTGAAGTAT+TGG | 0.417492 | 5.3:-24010001 | MS.gene45091:CDS |
TTGACTATCTTTATTGGAGA+TGG | 0.423356 | 5.3:-24010734 | MS.gene45091:CDS |
ATAGTACAATCATGTCCATT+TGG | 0.433551 | 5.3:+24010382 | None:intergenic |
TGCAAAATGATTGTGTTCAT+TGG | 0.437679 | 5.3:-24009888 | MS.gene45091:CDS |
CAATAAAGATAGTCAAAATC+AGG | 0.440358 | 5.3:+24010741 | None:intergenic |
ACACTTCATTCTTCACTCCT+AGG | 0.443349 | 5.3:+24009796 | None:intergenic |
GAATCATGTTGATGAGAAAT+GGG | 0.457430 | 5.3:-24010418 | MS.gene45091:CDS |
TAAGGACCTGGATGACCATC+TGG | 0.461971 | 5.3:+24009952 | None:intergenic |
GGCAAAAGATATGCACCAAA+TGG | 0.462882 | 5.3:-24010397 | MS.gene45091:CDS |
AATGGAGAGAAGAAAGTTGA+AGG | 0.470023 | 5.3:-24010096 | MS.gene45091:CDS |
TTTAGAAATTATAAAGAAGT+GGG | 0.470803 | 5.3:-24009827 | MS.gene45091:CDS |
ATCTCATTCCATGTATCAAT+CGG | 0.477028 | 5.3:+24009853 | None:intergenic |
TTAAGACCAGATGGTCATCC+AGG | 0.486939 | 5.3:-24009958 | MS.gene45091:CDS |
TTGTTGGTGATTCTTTAGCT+AGG | 0.490496 | 5.3:-24010635 | MS.gene45091:CDS |
ATTGATAGGAGAGGGAATAA+GGG | 0.492867 | 5.3:-24010216 | MS.gene45091:CDS |
AGAGAAGAAAGTTGAAGGAA+TGG | 0.493088 | 5.3:-24010091 | MS.gene45091:CDS |
CCCTTAATAGCATAATTGAT+AGG | 0.509822 | 5.3:-24010230 | MS.gene45091:CDS |
TCTTGAACCCCATTAAAGAA+TGG | 0.524242 | 5.3:+24009916 | None:intergenic |
GAAGGTGCTTGGGATAAGGC+TGG | 0.529140 | 5.3:-24010147 | MS.gene45091:CDS |
TGCCTGGACCGATTGATACA+TGG | 0.530575 | 5.3:-24009861 | MS.gene45091:CDS |
GAAAATTGAGATAGAAGAAG+TGG | 0.532759 | 5.3:-24010055 | MS.gene45091:CDS |
CAAATGAATGCAAAATTCCA+AGG | 0.537827 | 5.3:-24010707 | MS.gene45091:CDS |
CTTCCGGCTATTTACCATGA+GGG | 0.538180 | 5.3:-24010339 | MS.gene45091:CDS |
TTGGCTTTGTTAAGACCAGA+TGG | 0.544671 | 5.3:-24009967 | MS.gene45091:CDS |
CCCCATTAAAGAATGGAAAA+GGG | 0.551208 | 5.3:+24009923 | None:intergenic |
AGAAATTATAAAGAAGTGGG+AGG | 0.558622 | 5.3:-24009824 | MS.gene45091:CDS |
TTCCATGTATCAATCGGTCC+AGG | 0.567285 | 5.3:+24009859 | None:intergenic |
CTAAAATTGAATCACCCTCA+TGG | 0.567926 | 5.3:+24010325 | None:intergenic |
GGAAGAAATTGCATGACACA+TGG | 0.573080 | 5.3:-24010768 | None:intergenic |
TCACCCTCATGGTAAATAGC+CGG | 0.573329 | 5.3:+24010336 | None:intergenic |
TTGTACTATCAATTGGACAT+TGG | 0.581516 | 5.3:-24010368 | MS.gene45091:CDS |
ATAGCATAATTGATAGGAGA+GGG | 0.596014 | 5.3:-24010224 | MS.gene45091:CDS |
GAAGAAATTGCATGACACAT+GGG | 0.618181 | 5.3:-24010767 | None:intergenic |
AAAGGGTTCATATAAGGACC+TGG | 0.626122 | 5.3:+24009940 | None:intergenic |
AATTGAGATAGAAGAAGTGG+TGG | 0.634610 | 5.3:-24010052 | MS.gene45091:CDS |
GCTTCCGGCTATTTACCATG+AGG | 0.639421 | 5.3:-24010340 | MS.gene45091:CDS |
GTGGTGGCTGCTAAAGCCAA+AGG | 0.645087 | 5.3:-24010036 | MS.gene45091:CDS |
AAGGAATGGATAGTGAGATG+AGG | 0.645343 | 5.3:-24010077 | MS.gene45091:CDS |
CAAGCACCTTCAAAATGATG+TGG | 0.645352 | 5.3:+24010159 | None:intergenic |
ACTTGTGTACCAAAATGGCA+AGG | 0.655571 | 5.3:-24010562 | MS.gene45091:CDS |
AATAGCATAATTGATAGGAG+AGG | 0.660993 | 5.3:-24010225 | MS.gene45091:CDS |
AGAAGTGGGAGGAACAACCT+AGG | 0.672972 | 5.3:-24009813 | MS.gene45091:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAGAAATTATAAAGAAGT+GGG | - | chr5.3:24010730-24010749 | MS.gene45091:CDS | 15.0% |
!!! | TTTTAGAAATTATAAAGAAG+TGG | - | chr5.3:24010729-24010748 | MS.gene45091:CDS | 15.0% |
!! | TTCAAATATAGCTCATTATT+TGG | + | chr5.3:24010122-24010141 | None:intergenic | 20.0% |
!!! | AAAGTTAAGATTTGAAGTAT+TGG | - | chr5.3:24010556-24010575 | MS.gene45091:CDS | 20.0% |
!!! | GTTTTATGATGTATTAAGAA+AGG | - | chr5.3:24010292-24010311 | MS.gene45091:CDS | 20.0% |
! | ATGTATTAAGAAAGGCTTTA+AGG | - | chr5.3:24010300-24010319 | MS.gene45091:CDS | 25.0% |
! | ATTCAACTATTTCCTTGTAT+TGG | - | chr5.3:24010054-24010073 | MS.gene45091:CDS | 25.0% |
! | CAATAAAGATAGTCAAAATC+AGG | + | chr5.3:24009819-24009838 | None:intergenic | 25.0% |
! | CCTATCAATTATGCTATTAA+GGG | + | chr5.3:24010330-24010349 | None:intergenic | 25.0% |
! | GTCTTAATTACACTGAAATA+GGG | - | chr5.3:24010270-24010289 | MS.gene45091:CDS | 25.0% |
! | TCAATACCTTGTACTAAAAA+TGG | + | chr5.3:24010083-24010102 | None:intergenic | 25.0% |
! | TCCTATCAATTATGCTATTA+AGG | + | chr5.3:24010331-24010350 | None:intergenic | 25.0% |
!! | AGTATTGGATGTAACAAAAT+TGG | - | chr5.3:24010571-24010590 | MS.gene45091:CDS | 25.0% |
!!! | CTGATTTTGACTATCTTTAT+TGG | - | chr5.3:24009817-24009836 | MS.gene45091:CDS | 25.0% |
AATAGCATAATTGATAGGAG+AGG | - | chr5.3:24010332-24010351 | MS.gene45091:CDS | 30.0% | |
AATGGAAAAGGGTTCATATA+AGG | + | chr5.3:24010626-24010645 | None:intergenic | 30.0% | |
AGAAATTATAAAGAAGTGGG+AGG | - | chr5.3:24010733-24010752 | MS.gene45091:CDS | 30.0% | |
ATAGCATAATTGATAGGAGA+GGG | - | chr5.3:24010333-24010352 | MS.gene45091:CDS | 30.0% | |
ATAGTACAATCATGTCCATT+TGG | + | chr5.3:24010178-24010197 | None:intergenic | 30.0% | |
ATCTCATTCCATGTATCAAT+CGG | + | chr5.3:24010707-24010726 | None:intergenic | 30.0% | |
CAAATGAATGCAAAATTCCA+AGG | - | chr5.3:24009850-24009869 | MS.gene45091:CDS | 30.0% | |
CCCTTAATAGCATAATTGAT+AGG | - | chr5.3:24010327-24010346 | MS.gene45091:CDS | 30.0% | |
CTTAGTTGGAGAAAAGTAAT+TGG | + | chr5.3:24009882-24009901 | None:intergenic | 30.0% | |
GAAAATTGAGATAGAAGAAG+TGG | - | chr5.3:24010502-24010521 | MS.gene45091:CDS | 30.0% | |
GACATGATTGTACTATCAAT+TGG | - | chr5.3:24010182-24010201 | MS.gene45091:CDS | 30.0% | |
GGTCTTAATTACACTGAAAT+AGG | - | chr5.3:24010269-24010288 | MS.gene45091:CDS | 30.0% | |
TAAAAATGGAGACCAATACA+AGG | + | chr5.3:24010069-24010088 | None:intergenic | 30.0% | |
TACAAAGAAGAGACTCTAAT+TGG | + | chr5.3:24009950-24009969 | None:intergenic | 30.0% | |
TGCAAAATGATTGTGTTCAT+TGG | - | chr5.3:24010669-24010688 | MS.gene45091:CDS | 30.0% | |
TGTGTTTGTTCTTACTTAGT+TGG | + | chr5.3:24009896-24009915 | None:intergenic | 30.0% | |
TTCTTCTCTCCATTTCTATA+AGG | + | chr5.3:24010455-24010474 | None:intergenic | 30.0% | |
TTGACTATCTTTATTGGAGA+TGG | - | chr5.3:24009823-24009842 | MS.gene45091:CDS | 30.0% | |
TTGTACTATCAATTGGACAT+TGG | - | chr5.3:24010189-24010208 | MS.gene45091:CDS | 30.0% | |
! | AAAGTAATTGGTTCAAACCT+TGG | + | chr5.3:24009870-24009889 | None:intergenic | 30.0% |
! | AACCCTTTTCCATTCTTTAA+TGG | - | chr5.3:24010632-24010651 | MS.gene45091:CDS | 30.0% |
! | AAGACTAAGCCTTATAGAAA+TGG | - | chr5.3:24010443-24010462 | MS.gene45091:CDS | 30.0% |
! | ACCCTTTTCCATTCTTTAAT+GGG | - | chr5.3:24010633-24010652 | MS.gene45091:CDS | 30.0% |
! | ATGAGGGTGATTCAATTTTA+GGG | - | chr5.3:24010234-24010253 | MS.gene45091:CDS | 30.0% |
! | CTTGGAATTTTGCATTCATT+TGG | + | chr5.3:24009852-24009871 | None:intergenic | 30.0% |
! | GAATCATGTTGATGAGAAAT+GGG | - | chr5.3:24010139-24010158 | MS.gene45091:CDS | 30.0% |
! | TGAATCATGTTGATGAGAAA+TGG | - | chr5.3:24010138-24010157 | MS.gene45091:CDS | 30.0% |
! | TTTACACCACATCATTTTGA+AGG | - | chr5.3:24010392-24010411 | MS.gene45091:CDS | 30.0% |
! | TTTCTATAAGGCTTAGTCTT+TGG | + | chr5.3:24010443-24010462 | None:intergenic | 30.0% |
!! | AACAAACACATTGCTTTTGT+TGG | - | chr5.3:24009906-24009925 | MS.gene45091:CDS | 30.0% |
!!! | ATTTTAGGGTGTCATTATTG+TGG | - | chr5.3:24010248-24010267 | MS.gene45091:CDS | 30.0% |
AAAGCCAAAGGCAATGAATT+TGG | - | chr5.3:24010533-24010552 | MS.gene45091:CDS | 35.0% | |
AATGGAGAGAAGAAAGTTGA+AGG | - | chr5.3:24010461-24010480 | MS.gene45091:CDS | 35.0% | |
AATTGAGATAGAAGAAGTGG+TGG | - | chr5.3:24010505-24010524 | MS.gene45091:CDS | 35.0% | |
AATTGATAGGAGAGGGAATA+AGG | - | chr5.3:24010340-24010359 | MS.gene45091:CDS | 35.0% | |
ACCCCATTAAAGAATGGAAA+AGG | + | chr5.3:24010638-24010657 | None:intergenic | 35.0% | |
AGAGAAGAAAGTTGAAGGAA+TGG | - | chr5.3:24010466-24010485 | MS.gene45091:CDS | 35.0% | |
ATTGATAGGAGAGGGAATAA+GGG | - | chr5.3:24010341-24010360 | MS.gene45091:CDS | 35.0% | |
CCCCATTAAAGAATGGAAAA+GGG | + | chr5.3:24010637-24010656 | None:intergenic | 35.0% | |
CCTAAACTTGTGTACCAAAA+TGG | - | chr5.3:24009990-24010009 | MS.gene45091:CDS | 35.0% | |
CTAAAATTGAATCACCCTCA+TGG | + | chr5.3:24010235-24010254 | None:intergenic | 35.0% | |
CTTTCCAAATTCATTGCCTT+TGG | + | chr5.3:24010540-24010559 | None:intergenic | 35.0% | |
TCTTGAACCCCATTAAAGAA+TGG | + | chr5.3:24010644-24010663 | None:intergenic | 35.0% | |
! | AGGACAATCAATTTTCTAGG+TGG | - | chr5.3:24010015-24010034 | MS.gene45091:CDS | 35.0% |
! | CATGAGGGTGATTCAATTTT+AGG | - | chr5.3:24010233-24010252 | MS.gene45091:CDS | 35.0% |
! | CCCTTTTCCATTCTTTAATG+GGG | - | chr5.3:24010634-24010653 | MS.gene45091:CDS | 35.0% |
! | GCAAGGACAATCAATTTTCT+AGG | - | chr5.3:24010012-24010031 | MS.gene45091:CDS | 35.0% |
!! | ATTGATTGTCCTTGCCATTT+TGG | + | chr5.3:24010007-24010026 | None:intergenic | 35.0% |
!! | CCATTTTGGTACACAAGTTT+AGG | + | chr5.3:24009993-24010012 | None:intergenic | 35.0% |
!! | TTGTTGGTGATTCTTTAGCT+AGG | - | chr5.3:24009922-24009941 | MS.gene45091:CDS | 35.0% |
!!! | ACATCATTTTGAAGGTGCTT+GGG | - | chr5.3:24010400-24010419 | MS.gene45091:CDS | 35.0% |
!!! | TGGTCTCCATTTTTAGTACA+AGG | - | chr5.3:24010074-24010093 | MS.gene45091:CDS | 35.0% |
AAAGGGTTCATATAAGGACC+TGG | + | chr5.3:24010620-24010639 | None:intergenic | 40.0% | |
AAGGAATGGATAGTGAGATG+AGG | - | chr5.3:24010480-24010499 | MS.gene45091:CDS | 40.0% | |
ACTTGTGTACCAAAATGGCA+AGG | - | chr5.3:24009995-24010014 | MS.gene45091:CDS | 40.0% | |
CAAGCACCTTCAAAATGATG+TGG | + | chr5.3:24010401-24010420 | None:intergenic | 40.0% | |
GGCAAAAGATATGCACCAAA+TGG | - | chr5.3:24010160-24010179 | MS.gene45091:CDS | 40.0% | |
!! | TTGGCTTTGTTAAGACCAGA+TGG | - | chr5.3:24010590-24010609 | MS.gene45091:CDS | 40.0% |
!!! | CACATCATTTTGAAGGTGCT+TGG | - | chr5.3:24010399-24010418 | MS.gene45091:CDS | 40.0% |
!!! | TGGACATTGGTTTTTGCTTC+CGG | - | chr5.3:24010202-24010221 | MS.gene45091:CDS | 40.0% |
!!! | TTTTGAAGGTGCTTGGGATA+AGG | - | chr5.3:24010406-24010425 | MS.gene45091:CDS | 40.0% |
CTTCCGGCTATTTACCATGA+GGG | - | chr5.3:24010218-24010237 | MS.gene45091:CDS | 45.0% | |
TCACCCTCATGGTAAATAGC+CGG | + | chr5.3:24010224-24010243 | None:intergenic | 45.0% | |
TTAAGACCAGATGGTCATCC+AGG | - | chr5.3:24010599-24010618 | MS.gene45091:CDS | 45.0% | |
TTCCATGTATCAATCGGTCC+AGG | + | chr5.3:24010701-24010720 | None:intergenic | 45.0% | |
! | TGTGTTCATTGGTGTTTGCC+TGG | - | chr5.3:24010680-24010699 | MS.gene45091:CDS | 45.0% |
AGAAGTGGGAGGAACAACCT+AGG | - | chr5.3:24010744-24010763 | MS.gene45091:CDS | 50.0% | |
GCTTCCGGCTATTTACCATG+AGG | - | chr5.3:24010217-24010236 | MS.gene45091:CDS | 50.0% | |
TAAGGACCTGGATGACCATC+TGG | + | chr5.3:24010608-24010627 | None:intergenic | 50.0% | |
TGCCTGGACCGATTGATACA+TGG | - | chr5.3:24010696-24010715 | MS.gene45091:CDS | 50.0% | |
GTGGTGGCTGCTAAAGCCAA+AGG | - | chr5.3:24010521-24010540 | MS.gene45091:CDS | 55.0% | |
!! | GAAGGTGCTTGGGATAAGGC+TGG | - | chr5.3:24010410-24010429 | MS.gene45091:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 24009801 | 24010778 | 24009801 | ID=MS.gene45091 |
chr5.3 | mRNA | 24009801 | 24010778 | 24009801 | ID=MS.gene45091.t1;Parent=MS.gene45091 |
chr5.3 | exon | 24009801 | 24010778 | 24009801 | ID=MS.gene45091.t1.exon1;Parent=MS.gene45091.t1 |
chr5.3 | CDS | 24009801 | 24010778 | 24009801 | ID=cds.MS.gene45091.t1;Parent=MS.gene45091.t1 |
Gene Sequence |
Protein sequence |