Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048911.t1 | XP_013447172.1 | 95.8 | 427 | 11 | 2 | 1 | 425 | 1 | 422 | 5.10E-244 | 853.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048911.t1 | O82509 | 56.2 | 436 | 170 | 4 | 1 | 425 | 3 | 428 | 8.5e-147 | 521.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048911.t1 | A0A072TUJ8 | 95.8 | 427 | 11 | 2 | 1 | 425 | 1 | 422 | 3.7e-244 | 853.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene048911 | MS.gene027573 | PPI |
MS.gene048911 | MS.gene43909 | PPI |
MS.gene048911 | MS.gene68334 | PPI |
MS.gene027565 | MS.gene048911 | PPI |
MS.gene44187 | MS.gene048911 | PPI |
MS.gene45091 | MS.gene048911 | PPI |
MS.gene048911 | MS.gene011443 | PPI |
MS.gene43905 | MS.gene048911 | PPI |
MS.gene048911 | MS.gene027568 | PPI |
MS.gene048911 | MS.gene45095 | PPI |
MS.gene048911 | MS.gene68327 | PPI |
MS.gene048911 | MS.gene43903 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048911.t1 | MTR_8g099300 | 95.785 | 427 | 11 | 2 | 1 | 425 | 1 | 422 | 0.0 | 843 |
MS.gene048911.t1 | MTR_8g027900 | 67.045 | 352 | 115 | 1 | 74 | 425 | 208 | 558 | 0.0 | 522 |
MS.gene048911.t1 | MTR_6g016880 | 41.232 | 422 | 227 | 5 | 8 | 422 | 12 | 419 | 3.84e-117 | 349 |
MS.gene048911.t1 | MTR_7g019120 | 40.488 | 410 | 229 | 6 | 15 | 422 | 24 | 420 | 6.21e-113 | 338 |
MS.gene048911.t1 | MTR_5g035090 | 43.059 | 353 | 188 | 8 | 76 | 422 | 82 | 427 | 6.85e-100 | 305 |
MS.gene048911.t1 | MTR_8g104970 | 41.463 | 369 | 203 | 9 | 63 | 425 | 107 | 468 | 3.54e-98 | 302 |
MS.gene048911.t1 | MTR_5g035070 | 44.663 | 356 | 186 | 7 | 73 | 422 | 83 | 433 | 3.89e-98 | 301 |
MS.gene048911.t1 | MTR_5g035150 | 42.045 | 352 | 193 | 6 | 77 | 422 | 85 | 431 | 5.20e-98 | 300 |
MS.gene048911.t1 | MTR_3g109840 | 41.370 | 365 | 196 | 7 | 71 | 425 | 62 | 418 | 8.13e-98 | 299 |
MS.gene048911.t1 | MTR_5g035080 | 38.945 | 398 | 222 | 10 | 32 | 422 | 37 | 420 | 4.83e-97 | 297 |
MS.gene048911.t1 | MTR_2g016060 | 41.644 | 365 | 193 | 9 | 69 | 423 | 47 | 401 | 1.32e-93 | 288 |
MS.gene048911.t1 | MTR_7g033230 | 41.127 | 355 | 197 | 6 | 77 | 425 | 264 | 612 | 1.50e-93 | 294 |
MS.gene048911.t1 | MTR_7g033230 | 41.127 | 355 | 197 | 6 | 77 | 425 | 334 | 682 | 1.27e-92 | 293 |
MS.gene048911.t1 | MTR_6g016875 | 40.822 | 365 | 199 | 7 | 66 | 422 | 53 | 408 | 3.49e-92 | 285 |
MS.gene048911.t1 | MTR_6g007777 | 38.381 | 383 | 209 | 9 | 56 | 422 | 86 | 457 | 3.70e-88 | 276 |
MS.gene048911.t1 | MTR_1g076690 | 35.385 | 390 | 234 | 9 | 45 | 422 | 187 | 570 | 1.59e-80 | 259 |
MS.gene048911.t1 | MTR_6g061710 | 34.181 | 354 | 219 | 8 | 77 | 422 | 167 | 514 | 6.64e-74 | 240 |
MS.gene048911.t1 | MTR_5g035140 | 39.130 | 253 | 143 | 6 | 176 | 422 | 18 | 265 | 1.42e-57 | 190 |
MS.gene048911.t1 | MTR_0136s0010 | 32.331 | 399 | 223 | 13 | 41 | 418 | 133 | 505 | 1.05e-53 | 187 |
MS.gene048911.t1 | MTR_7g093450 | 32.961 | 358 | 204 | 12 | 76 | 418 | 247 | 583 | 1.23e-53 | 188 |
MS.gene048911.t1 | MTR_7g117160 | 46.231 | 199 | 57 | 6 | 223 | 421 | 41 | 189 | 7.98e-49 | 165 |
MS.gene048911.t1 | MTR_5g033800 | 31.092 | 357 | 211 | 13 | 76 | 418 | 144 | 479 | 5.89e-46 | 166 |
MS.gene048911.t1 | MTR_4g126950 | 28.256 | 407 | 242 | 15 | 39 | 423 | 69 | 447 | 1.03e-45 | 164 |
MS.gene048911.t1 | MTR_7g094750 | 30.556 | 360 | 220 | 12 | 77 | 423 | 91 | 433 | 1.45e-45 | 164 |
MS.gene048911.t1 | MTR_8g069790 | 29.917 | 361 | 210 | 12 | 76 | 418 | 177 | 512 | 2.19e-43 | 159 |
MS.gene048911.t1 | MTR_5g059400 | 30.252 | 357 | 214 | 10 | 77 | 418 | 175 | 511 | 1.67e-41 | 154 |
MS.gene048911.t1 | MTR_1g116130 | 30.252 | 357 | 214 | 10 | 77 | 418 | 175 | 511 | 1.67e-41 | 154 |
MS.gene048911.t1 | MTR_7g019140 | 44.937 | 158 | 80 | 1 | 12 | 169 | 21 | 171 | 2.11e-41 | 144 |
MS.gene048911.t1 | MTR_3g070900 | 28.771 | 358 | 233 | 10 | 77 | 424 | 106 | 451 | 6.70e-41 | 151 |
MS.gene048911.t1 | MTR_8g093870 | 26.817 | 399 | 250 | 14 | 41 | 422 | 99 | 472 | 4.16e-40 | 149 |
MS.gene048911.t1 | MTR_4g121560 | 29.235 | 366 | 223 | 14 | 73 | 423 | 110 | 454 | 4.36e-40 | 149 |
MS.gene048911.t1 | MTR_8g093530 | 30.084 | 359 | 208 | 12 | 76 | 422 | 89 | 416 | 6.10e-40 | 148 |
MS.gene048911.t1 | MTR_7g109550 | 28.933 | 356 | 210 | 12 | 77 | 418 | 137 | 463 | 4.48e-39 | 146 |
MS.gene048911.t1 | MTR_4g092830 | 26.486 | 370 | 229 | 9 | 77 | 425 | 48 | 395 | 4.90e-39 | 145 |
MS.gene048911.t1 | MTR_2g022560 | 28.093 | 388 | 238 | 14 | 55 | 423 | 73 | 438 | 5.54e-38 | 143 |
MS.gene048911.t1 | MTR_5g071350 | 28.926 | 363 | 212 | 10 | 77 | 418 | 58 | 395 | 6.62e-38 | 142 |
MS.gene048911.t1 | MTR_4g016940 | 26.301 | 365 | 235 | 11 | 73 | 422 | 82 | 427 | 9.37e-38 | 142 |
MS.gene048911.t1 | MTR_8g463790 | 29.396 | 364 | 206 | 16 | 77 | 418 | 71 | 405 | 2.05e-37 | 141 |
MS.gene048911.t1 | MTR_3g464570 | 28.696 | 345 | 226 | 8 | 77 | 417 | 43 | 371 | 9.07e-37 | 138 |
MS.gene048911.t1 | MTR_3g071650 | 27.273 | 352 | 232 | 10 | 77 | 418 | 89 | 426 | 4.59e-36 | 137 |
MS.gene048911.t1 | MTR_4g014440 | 26.121 | 379 | 236 | 16 | 66 | 422 | 51 | 407 | 4.95e-36 | 137 |
MS.gene048911.t1 | MTR_1g050448 | 26.077 | 418 | 252 | 14 | 19 | 422 | 1 | 375 | 9.68e-36 | 135 |
MS.gene048911.t1 | MTR_7g068920 | 26.905 | 420 | 269 | 13 | 22 | 422 | 21 | 421 | 9.95e-36 | 136 |
MS.gene048911.t1 | MTR_3g021090 | 29.477 | 363 | 214 | 11 | 69 | 424 | 23 | 350 | 1.25e-35 | 136 |
MS.gene048911.t1 | MTR_3g035830 | 28.375 | 363 | 218 | 11 | 69 | 424 | 23 | 350 | 1.85e-35 | 134 |
MS.gene048911.t1 | MTR_3g021060 | 28.255 | 361 | 217 | 10 | 69 | 422 | 38 | 363 | 3.26e-35 | 134 |
MS.gene048911.t1 | MTR_1g058380 | 26.555 | 418 | 257 | 16 | 26 | 423 | 8 | 395 | 5.12e-35 | 134 |
MS.gene048911.t1 | MTR_7g070060 | 26.997 | 363 | 241 | 13 | 74 | 424 | 61 | 411 | 6.66e-34 | 131 |
MS.gene048911.t1 | MTR_1g112210 | 27.066 | 351 | 218 | 13 | 76 | 418 | 58 | 378 | 8.41e-34 | 130 |
MS.gene048911.t1 | MTR_5g083260 | 25.915 | 355 | 233 | 11 | 77 | 418 | 83 | 420 | 1.71e-33 | 130 |
MS.gene048911.t1 | MTR_6g016240 | 26.316 | 437 | 253 | 17 | 17 | 420 | 14 | 414 | 3.15e-33 | 129 |
MS.gene048911.t1 | MTR_4g125060 | 25.068 | 367 | 237 | 12 | 72 | 422 | 127 | 471 | 1.74e-32 | 128 |
MS.gene048911.t1 | MTR_5g082880 | 27.151 | 372 | 237 | 13 | 69 | 424 | 160 | 513 | 3.18e-32 | 128 |
MS.gene048911.t1 | MTR_4g125060 | 25.068 | 367 | 237 | 12 | 72 | 422 | 195 | 539 | 4.15e-32 | 128 |
MS.gene048911.t1 | MTR_1g112210 | 26.437 | 348 | 211 | 13 | 76 | 418 | 58 | 365 | 5.43e-32 | 125 |
MS.gene048911.t1 | MTR_4g125060 | 25.341 | 367 | 236 | 12 | 72 | 422 | 166 | 510 | 7.08e-32 | 127 |
MS.gene048911.t1 | MTR_5g035120 | 36.747 | 166 | 96 | 3 | 12 | 172 | 9 | 170 | 3.22e-31 | 117 |
MS.gene048911.t1 | MTR_3g049330 | 29.745 | 353 | 210 | 12 | 77 | 423 | 31 | 351 | 4.69e-31 | 122 |
MS.gene048911.t1 | MTR_2g073510 | 29.494 | 356 | 208 | 13 | 76 | 422 | 32 | 353 | 2.19e-30 | 120 |
MS.gene048911.t1 | MTR_2g015720 | 28.531 | 354 | 212 | 13 | 71 | 418 | 36 | 354 | 1.70e-29 | 118 |
MS.gene048911.t1 | MTR_3g090120 | 25.745 | 369 | 215 | 15 | 77 | 423 | 129 | 460 | 4.13e-29 | 119 |
MS.gene048911.t1 | MTR_4g088030 | 26.912 | 353 | 224 | 10 | 74 | 423 | 30 | 351 | 1.05e-28 | 115 |
MS.gene048911.t1 | MTR_2g091175 | 27.350 | 351 | 214 | 12 | 74 | 418 | 47 | 362 | 1.58e-28 | 115 |
MS.gene048911.t1 | MTR_7g094750 | 29.960 | 247 | 153 | 8 | 77 | 312 | 91 | 328 | 3.21e-28 | 114 |
MS.gene048911.t1 | MTR_5g033800 | 30.894 | 246 | 150 | 8 | 76 | 311 | 144 | 379 | 8.52e-28 | 114 |
MS.gene048911.t1 | MTR_4g087730 | 25.789 | 380 | 244 | 11 | 51 | 423 | 15 | 363 | 4.32e-27 | 111 |
MS.gene048911.t1 | MTR_5g034810 | 27.273 | 352 | 218 | 12 | 77 | 423 | 35 | 353 | 5.87e-27 | 110 |
MS.gene048911.t1 | MTR_1g111010 | 27.401 | 354 | 211 | 12 | 76 | 424 | 31 | 343 | 1.24e-25 | 107 |
MS.gene048911.t1 | MTR_2g073500 | 27.606 | 355 | 212 | 11 | 77 | 423 | 29 | 346 | 7.34e-25 | 105 |
MS.gene048911.t1 | MTR_4g014430 | 24.932 | 365 | 229 | 12 | 77 | 422 | 108 | 446 | 1.57e-24 | 105 |
MS.gene048911.t1 | MTR_4g079700 | 25.568 | 352 | 219 | 10 | 74 | 418 | 44 | 359 | 1.36e-23 | 101 |
MS.gene048911.t1 | MTR_7g019130 | 37.600 | 125 | 74 | 4 | 194 | 316 | 1 | 123 | 6.67e-22 | 91.7 |
MS.gene048911.t1 | MTR_0929s0010 | 40.678 | 118 | 58 | 3 | 12 | 124 | 16 | 126 | 5.77e-21 | 88.6 |
MS.gene048911.t1 | MTR_7g070060 | 25.081 | 307 | 207 | 12 | 129 | 424 | 15 | 309 | 6.28e-18 | 84.3 |
MS.gene048911.t1 | MTR_7g070060 | 29.121 | 182 | 120 | 5 | 74 | 250 | 61 | 238 | 8.24e-18 | 84.0 |
MS.gene048911.t1 | MTR_3g464570 | 25.979 | 281 | 188 | 8 | 141 | 417 | 3 | 267 | 1.06e-16 | 80.1 |
MS.gene048911.t1 | MTR_0929s0020 | 34.831 | 89 | 55 | 3 | 194 | 281 | 1 | 87 | 2.11e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048911.t1 | AT4G11090 | 56.193 | 436 | 170 | 4 | 1 | 425 | 3 | 428 | 0.0 | 520 |
MS.gene048911.t1 | AT4G23790 | 57.845 | 427 | 172 | 6 | 5 | 425 | 6 | 430 | 3.93e-178 | 504 |
MS.gene048911.t1 | AT1G01430 | 53.670 | 436 | 184 | 9 | 5 | 424 | 16 | 449 | 1.96e-162 | 465 |
MS.gene048911.t1 | AT4G01080 | 52.099 | 405 | 167 | 5 | 22 | 424 | 53 | 432 | 1.67e-155 | 447 |
MS.gene048911.t1 | AT5G15890 | 46.439 | 351 | 176 | 6 | 73 | 422 | 183 | 522 | 9.53e-109 | 330 |
MS.gene048911.t1 | AT5G15900 | 39.813 | 427 | 234 | 8 | 1 | 422 | 1 | 409 | 3.81e-104 | 315 |
MS.gene048911.t1 | AT5G15900 | 39.813 | 427 | 234 | 8 | 1 | 422 | 20 | 428 | 6.82e-104 | 315 |
MS.gene048911.t1 | AT3G02440 | 40.051 | 392 | 210 | 7 | 47 | 424 | 90 | 470 | 4.63e-102 | 312 |
MS.gene048911.t1 | AT3G02440 | 40.051 | 392 | 210 | 7 | 47 | 424 | 98 | 478 | 6.95e-102 | 311 |
MS.gene048911.t1 | AT1G70230 | 37.882 | 425 | 247 | 9 | 1 | 422 | 1 | 411 | 2.10e-101 | 308 |
MS.gene048911.t1 | AT3G28150 | 37.634 | 372 | 217 | 6 | 57 | 422 | 48 | 410 | 1.71e-89 | 277 |
MS.gene048911.t1 | AT5G51640 | 34.840 | 376 | 220 | 9 | 60 | 422 | 125 | 488 | 9.85e-78 | 249 |
MS.gene048911.t1 | AT4G25360 | 33.586 | 396 | 240 | 10 | 41 | 422 | 138 | 524 | 3.54e-74 | 241 |
MS.gene048911.t1 | AT4G25360 | 33.586 | 396 | 240 | 10 | 41 | 422 | 138 | 524 | 3.54e-74 | 241 |
MS.gene048911.t1 | AT5G06700 | 31.781 | 365 | 208 | 10 | 77 | 423 | 255 | 596 | 5.09e-51 | 181 |
MS.gene048911.t1 | AT3G12060 | 31.967 | 366 | 206 | 12 | 77 | 423 | 196 | 537 | 9.97e-51 | 180 |
MS.gene048911.t1 | AT3G06080 | 32.143 | 364 | 210 | 13 | 77 | 423 | 103 | 446 | 9.51e-47 | 167 |
MS.gene048911.t1 | AT5G49340 | 30.471 | 361 | 223 | 9 | 75 | 423 | 98 | 442 | 5.61e-46 | 165 |
MS.gene048911.t1 | AT5G20590 | 30.387 | 362 | 205 | 14 | 77 | 418 | 141 | 475 | 5.91e-44 | 160 |
MS.gene048911.t1 | AT5G19160 | 31.215 | 362 | 219 | 12 | 77 | 423 | 99 | 445 | 1.31e-43 | 159 |
MS.gene048911.t1 | AT1G60790 | 32.044 | 362 | 203 | 14 | 77 | 418 | 190 | 528 | 8.23e-43 | 158 |
MS.gene048911.t1 | AT2G14530 | 27.838 | 370 | 235 | 12 | 68 | 422 | 54 | 406 | 1.13e-39 | 147 |
MS.gene048911.t1 | AT5G06230 | 28.877 | 374 | 226 | 13 | 70 | 424 | 14 | 366 | 5.72e-39 | 144 |
MS.gene048911.t1 | AT5G06230 | 28.877 | 374 | 226 | 13 | 70 | 424 | 55 | 407 | 1.23e-38 | 144 |
MS.gene048911.t1 | AT1G48880 | 29.526 | 359 | 202 | 12 | 76 | 419 | 114 | 436 | 1.37e-38 | 145 |
MS.gene048911.t1 | AT2G40160 | 27.632 | 380 | 248 | 12 | 59 | 423 | 57 | 424 | 1.48e-38 | 144 |
MS.gene048911.t1 | AT5G64020 | 28.000 | 375 | 218 | 11 | 77 | 422 | 57 | 408 | 1.91e-38 | 144 |
MS.gene048911.t1 | AT5G58600 | 28.652 | 356 | 225 | 9 | 77 | 423 | 66 | 401 | 2.19e-38 | 143 |
MS.gene048911.t1 | AT2G40160 | 28.000 | 375 | 243 | 12 | 59 | 418 | 57 | 419 | 2.60e-38 | 144 |
MS.gene048911.t1 | AT5G64470 | 29.363 | 361 | 227 | 13 | 77 | 423 | 55 | 401 | 2.63e-38 | 143 |
MS.gene048911.t1 | AT3G62390 | 26.329 | 395 | 231 | 15 | 48 | 418 | 109 | 467 | 4.61e-38 | 144 |
MS.gene048911.t1 | AT5G64470 | 29.609 | 358 | 224 | 13 | 77 | 423 | 55 | 395 | 4.90e-38 | 142 |
MS.gene048911.t1 | AT5G20680 | 28.150 | 373 | 208 | 15 | 77 | 422 | 118 | 457 | 7.11e-38 | 143 |
MS.gene048911.t1 | AT5G20680 | 28.150 | 373 | 208 | 15 | 77 | 422 | 212 | 551 | 1.29e-37 | 144 |
MS.gene048911.t1 | AT5G20680 | 28.150 | 373 | 208 | 15 | 77 | 422 | 212 | 551 | 1.29e-37 | 144 |
MS.gene048911.t1 | AT5G20680 | 28.150 | 373 | 208 | 15 | 77 | 422 | 212 | 551 | 1.29e-37 | 144 |
MS.gene048911.t1 | AT5G20680 | 28.150 | 373 | 208 | 15 | 77 | 422 | 212 | 551 | 1.29e-37 | 144 |
MS.gene048911.t1 | AT5G20680 | 28.150 | 373 | 208 | 15 | 77 | 422 | 194 | 533 | 1.52e-37 | 143 |
MS.gene048911.t1 | AT1G73140 | 27.704 | 379 | 213 | 15 | 65 | 418 | 59 | 401 | 6.34e-36 | 137 |
MS.gene048911.t1 | AT3G11570 | 28.655 | 342 | 214 | 12 | 93 | 423 | 98 | 420 | 3.05e-35 | 135 |
MS.gene048911.t1 | AT2G30010 | 25.131 | 382 | 245 | 10 | 60 | 423 | 39 | 397 | 1.01e-34 | 133 |
MS.gene048911.t1 | AT5G01360 | 25.956 | 366 | 230 | 15 | 73 | 419 | 32 | 375 | 1.32e-34 | 132 |
MS.gene048911.t1 | AT2G30010 | 25.131 | 382 | 245 | 10 | 60 | 423 | 82 | 440 | 2.44e-34 | 133 |
MS.gene048911.t1 | AT2G40320 | 25.412 | 425 | 268 | 15 | 14 | 418 | 23 | 418 | 3.10e-34 | 132 |
MS.gene048911.t1 | AT5G01360 | 25.956 | 366 | 230 | 15 | 73 | 419 | 88 | 431 | 4.66e-34 | 132 |
MS.gene048911.t1 | AT3G54260 | 27.322 | 366 | 208 | 15 | 77 | 424 | 51 | 376 | 8.70e-34 | 130 |
MS.gene048911.t1 | AT3G11030 | 26.857 | 350 | 235 | 9 | 77 | 417 | 106 | 443 | 2.62e-33 | 130 |
MS.gene048911.t1 | AT2G30900 | 28.691 | 359 | 199 | 13 | 77 | 418 | 43 | 361 | 6.15e-33 | 127 |
MS.gene048911.t1 | AT3G55990 | 23.773 | 387 | 270 | 11 | 48 | 424 | 114 | 485 | 1.22e-32 | 129 |
MS.gene048911.t1 | AT2G31110 | 28.647 | 377 | 225 | 12 | 50 | 418 | 18 | 358 | 1.09e-31 | 124 |
MS.gene048911.t1 | AT2G38320 | 25.907 | 386 | 250 | 14 | 58 | 424 | 38 | 406 | 1.58e-31 | 124 |
MS.gene048911.t1 | AT2G40150 | 24.033 | 362 | 253 | 9 | 76 | 424 | 70 | 422 | 2.03e-31 | 124 |
MS.gene048911.t1 | AT3G14850 | 29.296 | 355 | 210 | 14 | 77 | 423 | 34 | 355 | 6.24e-31 | 122 |
MS.gene048911.t1 | AT2G34070 | 27.378 | 347 | 221 | 9 | 74 | 418 | 62 | 379 | 2.88e-30 | 120 |
MS.gene048911.t1 | AT3G06080 | 32.677 | 254 | 149 | 8 | 77 | 318 | 103 | 346 | 4.80e-30 | 119 |
MS.gene048911.t1 | AT1G29050 | 28.249 | 354 | 212 | 11 | 77 | 423 | 61 | 379 | 2.79e-29 | 118 |
MS.gene048911.t1 | AT5G01620 | 26.902 | 368 | 221 | 15 | 76 | 422 | 109 | 449 | 3.30e-29 | 119 |
MS.gene048911.t1 | AT5G01620 | 26.902 | 368 | 221 | 15 | 76 | 422 | 109 | 449 | 3.30e-29 | 119 |
MS.gene048911.t1 | AT5G01620 | 26.902 | 368 | 221 | 15 | 76 | 422 | 117 | 457 | 4.51e-29 | 118 |
MS.gene048911.t1 | AT5G19160 | 32.520 | 246 | 146 | 8 | 77 | 311 | 99 | 335 | 9.43e-29 | 115 |
MS.gene048911.t1 | AT1G78710 | 26.158 | 367 | 208 | 15 | 76 | 424 | 37 | 358 | 3.37e-27 | 111 |
MS.gene048911.t1 | AT2G42570 | 26.446 | 363 | 218 | 14 | 62 | 415 | 35 | 357 | 4.73e-27 | 111 |
MS.gene048911.t1 | AT5G64470 | 28.731 | 268 | 173 | 10 | 77 | 333 | 55 | 315 | 1.25e-25 | 106 |
MS.gene048911.t1 | AT5G64470 | 28.625 | 269 | 174 | 10 | 77 | 334 | 55 | 316 | 1.53e-25 | 106 |
MS.gene048911.t1 | AT2G38320 | 25.150 | 334 | 217 | 11 | 107 | 424 | 7 | 323 | 2.53e-25 | 105 |
MS.gene048911.t1 | AT2G40160 | 27.863 | 262 | 175 | 7 | 59 | 312 | 57 | 312 | 2.54e-25 | 105 |
MS.gene048911.t1 | AT3G62390 | 25.510 | 294 | 187 | 9 | 48 | 325 | 109 | 386 | 1.18e-24 | 105 |
MS.gene048911.t1 | AT5G20590 | 28.458 | 253 | 149 | 9 | 77 | 312 | 141 | 378 | 3.53e-24 | 103 |
MS.gene048911.t1 | AT2G37720 | 23.947 | 380 | 245 | 11 | 62 | 422 | 128 | 482 | 3.71e-24 | 104 |
MS.gene048911.t1 | AT5G58600 | 28.692 | 237 | 153 | 6 | 77 | 310 | 66 | 289 | 9.40e-24 | 100 |
MS.gene048911.t1 | AT5G06230 | 28.517 | 263 | 162 | 9 | 70 | 315 | 55 | 308 | 4.05e-23 | 99.4 |
MS.gene048911.t1 | AT2G31110 | 30.049 | 203 | 133 | 3 | 50 | 252 | 18 | 211 | 5.39e-21 | 92.4 |
MS.gene048911.t1 | AT2G30900 | 30.806 | 211 | 130 | 6 | 77 | 285 | 43 | 239 | 1.18e-20 | 91.7 |
MS.gene048911.t1 | AT1G78710 | 29.050 | 179 | 114 | 4 | 76 | 252 | 30 | 197 | 1.30e-16 | 80.5 |
MS.gene048911.t1 | AT3G14850 | 27.208 | 283 | 165 | 14 | 149 | 423 | 3 | 252 | 3.56e-12 | 66.6 |
Find 77 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAGTTTGAGGTGGGGTTT+GGG | 0.248412 | 4.2:+4661365 | None:intergenic |
CATGTTTCATTTGTATAAAT+TGG | 0.250767 | 4.2:+4661067 | None:intergenic |
CCATGAGAATGACACTATAT+TGG | 0.259649 | 4.2:-4659169 | MS.gene048911:CDS |
AAGAAGTTTGAGGTGGGGTT+TGG | 0.275870 | 4.2:+4661364 | None:intergenic |
TCGACAAACTGGATAGTAAA+TGG | 0.284885 | 4.2:-4659263 | MS.gene048911:CDS |
TGTTTGCATTGGTGCTTGCC+TGG | 0.290741 | 4.2:-4658727 | MS.gene048911:CDS |
CGAAGGAAAGTGCCAGCTTT+TGG | 0.293863 | 4.2:+4659386 | None:intergenic |
ACTTCAGTATGTCAGTTATT+TGG | 0.298802 | 4.2:-4659359 | MS.gene048911:CDS |
CTTGCTCTGCACGCTTTCTA+AGG | 0.308263 | 4.2:-4660858 | MS.gene048911:intron |
TCCATCTCACCTTCTTTAAT+CGG | 0.314421 | 4.2:+4658952 | None:intergenic |
GGTAAAGTGTGGGCGCTTAT+TGG | 0.317484 | 4.2:-4660911 | MS.gene048911:CDS |
TAAATTGGACCCAATGGATT+TGG | 0.320873 | 4.2:+4661082 | None:intergenic |
TAATAATGTAATCGAAGTTT+AGG | 0.335296 | 4.2:+4659229 | None:intergenic |
TGAGTTAGAAGAGTTTAAAA+AGG | 0.345867 | 4.2:-4658896 | MS.gene048911:CDS |
CTCCATTATGATGTCATTCC+AGG | 0.357571 | 4.2:+4658693 | None:intergenic |
CTGAACATGGTTACGAGAAA+TGG | 0.358145 | 4.2:+4660883 | None:intergenic |
AACAAGAACATGACAGATCT+AGG | 0.367360 | 4.2:-4659126 | MS.gene048911:CDS |
CATGAGAATGACACTATATT+GGG | 0.390403 | 4.2:-4659168 | MS.gene048911:CDS |
GTTTGCATTGGTGCTTGCCT+GGG | 0.409694 | 4.2:-4658726 | MS.gene048911:CDS |
CAAAATCAAACCCTTGTGAT+TGG | 0.410152 | 4.2:+4659047 | None:intergenic |
TATGGACCCGGATGCCCATC+TGG | 0.419716 | 4.2:+4658802 | None:intergenic |
TTTGAGACCAGATGGGCATC+CGG | 0.423399 | 4.2:-4658809 | MS.gene048911:CDS |
GGTTTGGGGTTCAGTGAGAG+TGG | 0.428680 | 4.2:+4661380 | None:intergenic |
AAGGGTTGAAATTGCCTGTA+TGG | 0.436352 | 4.2:+4658784 | None:intergenic |
TGAGCTATATCTCGACAAAC+TGG | 0.441451 | 4.2:-4659274 | MS.gene048911:CDS |
ATGTCATTCCAGGAGTCTAT+AGG | 0.447469 | 4.2:+4658703 | None:intergenic |
CTCCTGGAATGACATCATAA+TGG | 0.452437 | 4.2:-4658695 | MS.gene048911:CDS |
GTTTGGGGTTCAGTGAGAGT+GGG | 0.464045 | 4.2:+4661381 | None:intergenic |
TTTGAAGAGGGAGTTGTTGA+AGG | 0.465492 | 4.2:+4661331 | None:intergenic |
TGCCTGGGCCTATAGACTCC+TGG | 0.470914 | 4.2:-4658711 | MS.gene048911:CDS |
AAAGAGAAGAAGTTTGAGGT+GGG | 0.480555 | 4.2:+4661358 | None:intergenic |
TTTGTATAAATTGGACCCAA+TGG | 0.481637 | 4.2:+4661076 | None:intergenic |
GATTACATTATTATTTCAAC+GGG | 0.486220 | 4.2:-4659219 | MS.gene048911:CDS |
CGATTACATTATTATTTCAA+CGG | 0.495469 | 4.2:-4659220 | MS.gene048911:CDS |
TCAGAAAGAGAAGAAGTTTG+AGG | 0.498283 | 4.2:+4661354 | None:intergenic |
TTGAGACCAGATGGGCATCC+GGG | 0.502873 | 4.2:-4658808 | MS.gene048911:CDS |
ATGGGCATCCGGGTCCATAC+AGG | 0.516143 | 4.2:-4658798 | MS.gene048911:CDS |
GAAGTTTGAGGTGGGGTTTG+GGG | 0.523244 | 4.2:+4661366 | None:intergenic |
TTATTATTTCAACGGGAAAG+TGG | 0.527276 | 4.2:-4659212 | MS.gene048911:CDS |
ATCAAGTTGAGAAACCTTTG+AGG | 0.527808 | 4.2:+4660938 | None:intergenic |
ATAGGTAACTCACAATCTCT+AGG | 0.532576 | 4.2:+4660968 | None:intergenic |
TGATTGGGTACCAAATCCAT+TGG | 0.533144 | 4.2:-4661092 | MS.gene048911:CDS |
GACACTATATTGGGCTGTCA+CGG | 0.534615 | 4.2:-4659159 | MS.gene048911:CDS |
TTCAGACTGATTGTTTGCAT+TGG | 0.536161 | 4.2:-4658738 | MS.gene048911:CDS |
TTCCAGGAGTCTATAGGCCC+AGG | 0.538000 | 4.2:+4658709 | None:intergenic |
AAGAGAAGAAGTTTGAGGTG+GGG | 0.541698 | 4.2:+4661359 | None:intergenic |
CATCGTCACTTCCAATCACA+AGG | 0.543767 | 4.2:-4659058 | MS.gene048911:CDS |
GAAAATGGAGAGTGGTTTAG+CGG | 0.544102 | 4.2:-4658997 | MS.gene048911:CDS |
GCCGATTAAAGAAGGTGAGA+TGG | 0.546742 | 4.2:-4658953 | MS.gene048911:CDS |
TCTGGTCTCAAAAGCGAAAG+TGG | 0.551364 | 4.2:+4658820 | None:intergenic |
CAACTCTCTCCCACCGACAC+TGG | 0.551711 | 4.2:-4661291 | MS.gene048911:intron |
GAAAGAGAAGAAGTTTGAGG+TGG | 0.556991 | 4.2:+4661357 | None:intergenic |
CCAATATAGTGTCATTCTCA+TGG | 0.557467 | 4.2:+4659169 | None:intergenic |
AGAACTGAGCCGATTAAAGA+AGG | 0.561383 | 4.2:-4658961 | MS.gene048911:CDS |
GATTGGGTACCAAATCCATT+GGG | 0.561920 | 4.2:-4661091 | MS.gene048911:CDS |
GAGTGAGAAGTAACTTGATG+AGG | 0.562325 | 4.2:+4661451 | None:intergenic |
ATAATGGAGATGGTTGTCAA+TGG | 0.563525 | 4.2:-4658679 | MS.gene048911:CDS |
CTTAGAAAGCGTGCAGAGCA+AGG | 0.565769 | 4.2:+4660859 | None:intergenic |
ATAGCAGCTTCCACAAGGAA+TGG | 0.582566 | 4.2:+4659333 | None:intergenic |
GCAATTTCAACCCTTTGCCA+AGG | 0.584888 | 4.2:-4658776 | MS.gene048911:CDS |
GTCTTAGTCTATCACGATGA+GGG | 0.589976 | 4.2:-4659417 | MS.gene048911:CDS |
AGGGATACAAGTCCAAAAGC+TGG | 0.595283 | 4.2:-4659398 | MS.gene048911:CDS |
ATGTTACTGACCAGTGTCGG+TGG | 0.597544 | 4.2:+4661281 | None:intergenic |
ACAAGAACATGACAGATCTA+GGG | 0.605770 | 4.2:-4659125 | MS.gene048911:CDS |
TGCAGAGCAAGGACTGAACA+TGG | 0.608168 | 4.2:+4660870 | None:intergenic |
TATTTGGTCACCATTCCTTG+TGG | 0.611002 | 4.2:-4659343 | MS.gene048911:CDS |
GAATGACATCATAATGGAGA+TGG | 0.612407 | 4.2:-4658689 | MS.gene048911:CDS |
TGAAATTGCCTGTATGGACC+CGG | 0.620052 | 4.2:+4658790 | None:intergenic |
AGGTTTCTCAACTTGATGCG+TGG | 0.635087 | 4.2:-4660932 | MS.gene048911:CDS |
ACTTGATGCGTGGTAAAGTG+TGG | 0.641096 | 4.2:-4660922 | MS.gene048911:CDS |
CTTGATGCGTGGTAAAGTGT+GGG | 0.646603 | 4.2:-4660921 | MS.gene048911:CDS |
TGTCTTAGTCTATCACGATG+AGG | 0.652354 | 4.2:-4659418 | MS.gene048911:CDS |
ATCGTCACTTCCAATCACAA+GGG | 0.657050 | 4.2:-4659057 | MS.gene048911:CDS |
TGTTACTGACCAGTGTCGGT+GGG | 0.657177 | 4.2:+4661282 | None:intergenic |
GACATACTGAAGTTGTACGA+AGG | 0.673475 | 4.2:+4659369 | None:intergenic |
AATGGAGAGTGGTTTAGCGG+CGG | 0.675176 | 4.2:-4658994 | MS.gene048911:CDS |
AGAATGTTACTGACCAGTGT+CGG | 0.728713 | 4.2:+4661278 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATTTACAATATTTGA+TGG | - | chr4.2:4659928-4659947 | MS.gene048911:intron | 10.0% |
!! | AATTTAGATAAAAATAGTGA+AGG | + | chr4.2:4660425-4660444 | None:intergenic | 15.0% |
!!! | TCTTCTATTTAAAACAAAAA+TGG | + | chr4.2:4660517-4660536 | None:intergenic | 15.0% |
!! | AAAAGGATAATGATTATGAA+AGG | - | chr4.2:4660123-4660142 | MS.gene048911:intron | 20.0% |
!! | ATAATGATTATGAAAGGTAA+TGG | - | chr4.2:4660129-4660148 | MS.gene048911:intron | 20.0% |
!! | ATCAAAATTGCTTGAAAAAT+GGG | - | chr4.2:4659140-4659159 | MS.gene048911:CDS | 20.0% |
!! | CATGTTTCATTTGTATAAAT+TGG | + | chr4.2:4659103-4659122 | None:intergenic | 20.0% |
!! | CGATTACATTATTATTTCAA+CGG | - | chr4.2:4660947-4660966 | MS.gene048911:CDS | 20.0% |
!! | GATTACATTATTATTTCAAC+GGG | - | chr4.2:4660948-4660967 | MS.gene048911:CDS | 20.0% |
!! | TAATAATGTAATCGAAGTTT+AGG | + | chr4.2:4660941-4660960 | None:intergenic | 20.0% |
!! | TCAATTAAGAACAGTTAAAA+AGG | - | chr4.2:4660106-4660125 | MS.gene048911:intron | 20.0% |
!! | TCAATTAAGAAGAGTTAAAA+AGG | - | chr4.2:4660212-4660231 | MS.gene048911:intron | 20.0% |
!!! | AAAAATGAAAAAGTATAGAC+TGG | - | chr4.2:4660061-4660080 | MS.gene048911:intron | 20.0% |
!!! | AATCATATAAACTTTTGCAA+AGG | - | chr4.2:4660677-4660696 | MS.gene048911:intron | 20.0% |
!!! | ATATTGTTTTGAACTTTGAT+TGG | - | chr4.2:4659962-4659981 | MS.gene048911:intron | 20.0% |
!!! | GGGATTTTTACTTTTTATTT+TGG | - | chr4.2:4659024-4659043 | MS.gene048911:CDS | 20.0% |
!!! | GGTAAATGTGATTATTTTAA+TGG | - | chr4.2:4659052-4659071 | MS.gene048911:CDS | 20.0% |
!!! | GTCTATACTTTTTCATTTTT+TGG | + | chr4.2:4660061-4660080 | None:intergenic | 20.0% |
!!! | TGATTATTTTAATGGTGATT+GGG | - | chr4.2:4659060-4659079 | MS.gene048911:CDS | 20.0% |
! | AAAAGGATAATGATCATGAA+AGG | - | chr4.2:4660229-4660248 | MS.gene048911:intron | 25.0% |
! | ATAATGATCATGAAAGGTAA+TGG | - | chr4.2:4660235-4660254 | MS.gene048911:intron | 25.0% |
! | CATCAAAATTGCTTGAAAAA+TGG | - | chr4.2:4659139-4659158 | MS.gene048911:CDS | 25.0% |
! | TGAGTTAGAAGAGTTTAAAA+AGG | - | chr4.2:4661271-4661290 | MS.gene048911:intron | 25.0% |
! | TTCCAAAACAAGTTAAAGTT+GGG | - | chr4.2:4658999-4659018 | MS.gene048911:CDS | 25.0% |
! | TTGAAGTAATTAATCAACCT+AGG | - | chr4.2:4659701-4659720 | MS.gene048911:intron | 25.0% |
! | TTTCCAAAACAAGTTAAAGT+TGG | - | chr4.2:4658998-4659017 | MS.gene048911:CDS | 25.0% |
!! | ACTTGATGAGGTAATTTTTA+TGG | + | chr4.2:4658707-4658726 | None:intergenic | 25.0% |
!! | ATTTAAAACAAAAATGGCGA+AGG | + | chr4.2:4660511-4660530 | None:intergenic | 25.0% |
!! | TTTGTCAATTTTATGAAACC+TGG | - | chr4.2:4660602-4660621 | MS.gene048911:intron | 25.0% |
!!! | AATTTTGATGTGATTCAATG+AGG | + | chr4.2:4659129-4659148 | None:intergenic | 25.0% |
!!! | CAATAGTTTTGTCAATAGAT+TGG | - | chr4.2:4659384-4659403 | MS.gene048911:CDS | 25.0% |
!!! | GCTATTTTTGAAGACATAAA+CGG | - | chr4.2:4660852-4660871 | MS.gene048911:intron | 25.0% |
!!! | GTCTTTTTTACGTGTTTTTT+TGG | - | chr4.2:4659492-4659511 | MS.gene048911:intron | 25.0% |
!!! | GTGATTATTTTAATGGTGAT+TGG | - | chr4.2:4659059-4659078 | MS.gene048911:CDS | 25.0% |
!!! | TTACTTTTTATTTTGGATGC+AGG | - | chr4.2:4659031-4659050 | MS.gene048911:CDS | 25.0% |
!!! | TTTAACTTGTTTTGGAAACT+CGG | + | chr4.2:4658996-4659015 | None:intergenic | 25.0% |
AAAACAAGTTAAAGTTGGGT+TGG | - | chr4.2:4659003-4659022 | MS.gene048911:CDS | 30.0% | |
AAACAAGTTAAAGTTGGGTT+GGG | - | chr4.2:4659004-4659023 | MS.gene048911:CDS | 30.0% | |
AAATGCATAATTGACTAGAC+CGG | + | chr4.2:4660309-4660328 | None:intergenic | 30.0% | |
ACTTCAGTATGTCAGTTATT+TGG | - | chr4.2:4660808-4660827 | MS.gene048911:intron | 30.0% | |
AGAATAACTCAAGAATCTGT+TGG | - | chr4.2:4659583-4659602 | MS.gene048911:intron | 30.0% | |
CACAAAAGATCAGACAAAAA+AGG | + | chr4.2:4659446-4659465 | None:intergenic | 30.0% | |
CATACAAGCTGTAATAGAAT+AGG | - | chr4.2:4659648-4659667 | MS.gene048911:intron | 30.0% | |
CATGAGAATGACACTATATT+GGG | - | chr4.2:4660999-4661018 | MS.gene048911:CDS | 30.0% | |
CTAGCTCAATAGATAAGATA+AGG | - | chr4.2:4659795-4659814 | MS.gene048911:intron | 30.0% | |
GAAATAGTGTTTAATTCCTG+TGG | - | chr4.2:4658934-4658953 | MS.gene048911:CDS | 30.0% | |
TGTACATGAAGAATAAACGA+GGG | + | chr4.2:4660387-4660406 | None:intergenic | 30.0% | |
TTATTATTTCAACGGGAAAG+TGG | - | chr4.2:4660955-4660974 | MS.gene048911:CDS | 30.0% | |
TTTGTATAAATTGGACCCAA+TGG | + | chr4.2:4659094-4659113 | None:intergenic | 30.0% | |
! | AACCTTTGAGGATCAAAAAT+AGG | + | chr4.2:4659220-4659239 | None:intergenic | 30.0% |
! | AACTTTAGCATTTTTGTCCT+TGG | + | chr4.2:4661411-4661430 | None:intergenic | 30.0% |
! | CTTCTTTCCTCAATTACTTT+TGG | + | chr4.2:4659907-4659926 | None:intergenic | 30.0% |
! | CTTTTGTGAATGTTTCTTTG+AGG | - | chr4.2:4659458-4659477 | MS.gene048911:intron | 30.0% |
! | TGGAAATTAAGCTTTTGCTT+AGG | - | chr4.2:4661234-4661253 | MS.gene048911:intron | 30.0% |
!! | GTTCTTGTTCATTTTGAAGA+GGG | + | chr4.2:4658851-4658870 | None:intergenic | 30.0% |
!! | TGTTCTTGTTCATTTTGAAG+AGG | + | chr4.2:4658852-4658871 | None:intergenic | 30.0% |
!!! | AACCCAACTTTAACTTGTTT+TGG | + | chr4.2:4659004-4659023 | None:intergenic | 30.0% |
!!! | AGATTTTTTGTACTGGAAGT+GGG | - | chr4.2:4659174-4659193 | MS.gene048911:CDS | 30.0% |
!!! | TACCTATTTTTGATCCTCAA+AGG | - | chr4.2:4659215-4659234 | MS.gene048911:CDS | 30.0% |
AAACTACCAAAGTTATGCGT+TGG | + | chr4.2:4659548-4659567 | None:intergenic | 35.0% | |
AACAAGAACATGACAGATCT+AGG | - | chr4.2:4661041-4661060 | MS.gene048911:CDS | 35.0% | |
ACAAGAACATGACAGATCTA+GGG | - | chr4.2:4661042-4661061 | MS.gene048911:CDS | 35.0% | |
AGAATATAGCACCTGAGAAT+CGG | - | chr4.2:4659838-4659857 | MS.gene048911:intron | 35.0% | |
ATAGAATAGGTCTATGCTCT+TGG | - | chr4.2:4659661-4659680 | MS.gene048911:intron | 35.0% | |
ATAGGTAACTCACAATCTCT+AGG | + | chr4.2:4659202-4659221 | None:intergenic | 35.0% | |
ATCAATTCAGTCCAAACAAG+TGG | + | chr4.2:4660637-4660656 | None:intergenic | 35.0% | |
ATCAGCTCCAAAAGTAATTG+AGG | - | chr4.2:4659897-4659916 | MS.gene048911:intron | 35.0% | |
CAAAATCAAACCCTTGTGAT+TGG | + | chr4.2:4661123-4661142 | None:intergenic | 35.0% | |
CAGTACAAAAAATCTCTGTC+TGG | + | chr4.2:4659169-4659188 | None:intergenic | 35.0% | |
CCATGAGAATGACACTATAT+TGG | - | chr4.2:4660998-4661017 | MS.gene048911:CDS | 35.0% | |
GACAACAACGATGAATACAA+TGG | + | chr4.2:4659365-4659384 | None:intergenic | 35.0% | |
GGTAGTTTATTTATCGAGTC+TGG | - | chr4.2:4659560-4659579 | MS.gene048911:intron | 35.0% | |
GGTCTCAATGTTCAATTAGT+CGG | - | chr4.2:4658955-4658974 | MS.gene048911:CDS | 35.0% | |
GTGTACATGAAGAATAAACG+AGG | + | chr4.2:4660388-4660407 | None:intergenic | 35.0% | |
TAATTGAACATTGAGACCAC+AGG | + | chr4.2:4658953-4658972 | None:intergenic | 35.0% | |
TCAGAAAGAGAAGAAGTTTG+AGG | + | chr4.2:4658816-4658835 | None:intergenic | 35.0% | |
TCCATCTCACCTTCTTTAAT+CGG | + | chr4.2:4661218-4661237 | None:intergenic | 35.0% | |
TCGACAAACTGGATAGTAAA+TGG | - | chr4.2:4660904-4660923 | MS.gene048911:CDS | 35.0% | |
TTCAGACTGATTGTTTGCAT+TGG | - | chr4.2:4661429-4661448 | MS.gene048911:CDS | 35.0% | |
! | AAAGAGAAGAAGTTTGAGGT+GGG | + | chr4.2:4658812-4658831 | None:intergenic | 35.0% |
! | ACCACTCTCCATTTTCAAAA+TGG | + | chr4.2:4661166-4661185 | None:intergenic | 35.0% |
! | ATAATGGAGATGGTTGTCAA+TGG | - | chr4.2:4661488-4661507 | MS.gene048911:CDS | 35.0% |
! | ATTTTCAAAATGGTCAGGTG+TGG | + | chr4.2:4661156-4661175 | None:intergenic | 35.0% |
! | CCAATATAGTGTCATTCTCA+TGG | + | chr4.2:4661001-4661020 | None:intergenic | 35.0% |
! | GAATGACATCATAATGGAGA+TGG | - | chr4.2:4661478-4661497 | MS.gene048911:CDS | 35.0% |
! | GCGTCTAAAGCTTCAAAAAA+TGG | - | chr4.2:4661296-4661315 | MS.gene048911:CDS | 35.0% |
! | TAAATTGGACCCAATGGATT+TGG | + | chr4.2:4659088-4659107 | None:intergenic | 35.0% |
! | TCTCCATTTTCAAAATGGTC+AGG | + | chr4.2:4661161-4661180 | None:intergenic | 35.0% |
!! | ACAAGGGTTTGATTTTGTTC+AGG | - | chr4.2:4661126-4661145 | MS.gene048911:intron | 35.0% |
!! | ACACCTGACCATTTTGAAAA+TGG | - | chr4.2:4661155-4661174 | MS.gene048911:intron | 35.0% |
!! | ACCATTTTGAAAATGGAGAG+TGG | - | chr4.2:4661162-4661181 | MS.gene048911:intron | 35.0% |
!! | ATCAAGTTGAGAAACCTTTG+AGG | + | chr4.2:4659232-4659251 | None:intergenic | 35.0% |
!!! | CAGACAGAGATTTTTTGTAC+TGG | - | chr4.2:4659167-4659186 | MS.gene048911:CDS | 35.0% |
!!! | CTTCAACTATTTTGACCTTC+AGG | - | chr4.2:4660716-4660735 | MS.gene048911:intron | 35.0% |
!!! | GAGATTTTTTGTACTGGAAG+TGG | - | chr4.2:4659173-4659192 | MS.gene048911:CDS | 35.0% |
!!! | TTTTCAAGTTTTGCCAGTCT+AGG | + | chr4.2:4660077-4660096 | None:intergenic | 35.0% |
AACAAGTGGTCAAAAAGTCC+AGG | + | chr4.2:4660623-4660642 | None:intergenic | 40.0% | |
AAGGGTTGAAATTGCCTGTA+TGG | + | chr4.2:4661386-4661405 | None:intergenic | 40.0% | |
AGAACTGAGCCGATTAAAGA+AGG | - | chr4.2:4661206-4661225 | MS.gene048911:intron | 40.0% | |
AGAATGTTACTGACCAGTGT+CGG | + | chr4.2:4658892-4658911 | None:intergenic | 40.0% | |
ATCGTCACTTCCAATCACAA+GGG | - | chr4.2:4661110-4661129 | MS.gene048911:CDS | 40.0% | |
ATGTCATTCCAGGAGTCTAT+AGG | + | chr4.2:4661467-4661486 | None:intergenic | 40.0% | |
CAAAAATAGCAGCTTCCACA+AGG | + | chr4.2:4660842-4660861 | None:intergenic | 40.0% | |
CTCCATTATGATGTCATTCC+AGG | + | chr4.2:4661477-4661496 | None:intergenic | 40.0% | |
CTCCTGGAATGACATCATAA+TGG | - | chr4.2:4661472-4661491 | MS.gene048911:CDS | 40.0% | |
CTGAACATGGTTACGAGAAA+TGG | + | chr4.2:4659287-4659306 | None:intergenic | 40.0% | |
GAAAATGGAGAGTGGTTTAG+CGG | - | chr4.2:4661170-4661189 | MS.gene048911:intron | 40.0% | |
GAAAGAGAAGAAGTTTGAGG+TGG | + | chr4.2:4658813-4658832 | None:intergenic | 40.0% | |
GACATACTGAAGTTGTACGA+AGG | + | chr4.2:4660801-4660820 | None:intergenic | 40.0% | |
GAGTGAGAAGTAACTTGATG+AGG | + | chr4.2:4658719-4658738 | None:intergenic | 40.0% | |
GATTGGGTACCAAATCCATT+GGG | - | chr4.2:4659076-4659095 | MS.gene048911:CDS | 40.0% | |
GTCTTAGTCTATCACGATGA+GGG | - | chr4.2:4660750-4660769 | MS.gene048911:intron | 40.0% | |
GTTGGAACCAAAACAAGATC+CGG | + | chr4.2:4659530-4659549 | None:intergenic | 40.0% | |
GTTTGGACTGAATTGATGCA+TGG | - | chr4.2:4660640-4660659 | MS.gene048911:intron | 40.0% | |
TACGTGTATGGACTTGTAAC+TGG | + | chr4.2:4660277-4660296 | None:intergenic | 40.0% | |
TATTTGGTCACCATTCCTTG+TGG | - | chr4.2:4660824-4660843 | MS.gene048911:intron | 40.0% | |
TCAACCTAGGATGAAAAGAG+TGG | - | chr4.2:4659714-4659733 | MS.gene048911:intron | 40.0% | |
TGAGCTATATCTCGACAAAC+TGG | - | chr4.2:4660893-4660912 | MS.gene048911:CDS | 40.0% | |
TGATTGGGTACCAAATCCAT+TGG | - | chr4.2:4659075-4659094 | MS.gene048911:CDS | 40.0% | |
TGTCTTAGTCTATCACGATG+AGG | - | chr4.2:4660749-4660768 | MS.gene048911:intron | 40.0% | |
TTGGTTCCAACGCATAACTT+TGG | - | chr4.2:4659539-4659558 | MS.gene048911:intron | 40.0% | |
TTTGAAGAGGGAGTTGTTGA+AGG | + | chr4.2:4658839-4658858 | None:intergenic | 40.0% | |
! | AAGAGAAGAAGTTTGAGGTG+GGG | + | chr4.2:4658811-4658830 | None:intergenic | 40.0% |
! | AGCATTTTTGTCCTTGGCAA+AGG | + | chr4.2:4661405-4661424 | None:intergenic | 40.0% |
! | GCATTTTTGTCCTTGGCAAA+GGG | + | chr4.2:4661404-4661423 | None:intergenic | 40.0% |
! | GGACTTTTTGACCACTTGTT+TGG | - | chr4.2:4660623-4660642 | MS.gene048911:intron | 40.0% |
! | TTCTCCACTCTTTTCATCCT+AGG | + | chr4.2:4659721-4659740 | None:intergenic | 40.0% |
!! | AGACAGCTTTTTCTACCTGA+AGG | + | chr4.2:4660734-4660753 | None:intergenic | 40.0% |
!!! | ACAAGAACTCTGGGATTTTG+AGG | - | chr4.2:4659866-4659885 | MS.gene048911:intron | 40.0% |
!!! | TTTCGCTTTTGAGACCAGAT+GGG | - | chr4.2:4661351-4661370 | MS.gene048911:CDS | 40.0% |
ACTTGATGCGTGGTAAAGTG+TGG | - | chr4.2:4659245-4659264 | MS.gene048911:CDS | 45.0% | |
AGGGATACAAGTCCAAAAGC+TGG | - | chr4.2:4660769-4660788 | MS.gene048911:intron | 45.0% | |
AGGTTTCTCAACTTGATGCG+TGG | - | chr4.2:4659235-4659254 | MS.gene048911:CDS | 45.0% | |
ATAGCACCTGAGAATCGGAT+TGG | - | chr4.2:4659843-4659862 | MS.gene048911:intron | 45.0% | |
ATAGCAGCTTCCACAAGGAA+TGG | + | chr4.2:4660837-4660856 | None:intergenic | 45.0% | |
CATACACGTATAGTTGCCAC+CGG | - | chr4.2:4660287-4660306 | MS.gene048911:intron | 45.0% | |
CATCGTCACTTCCAATCACA+AGG | - | chr4.2:4661109-4661128 | MS.gene048911:CDS | 45.0% | |
CTTGATGCGTGGTAAAGTGT+GGG | - | chr4.2:4659246-4659265 | MS.gene048911:CDS | 45.0% | |
GACACTATATTGGGCTGTCA+CGG | - | chr4.2:4661008-4661027 | MS.gene048911:CDS | 45.0% | |
GCAATTTCAACCCTTTGCCA+AGG | - | chr4.2:4661391-4661410 | MS.gene048911:CDS | 45.0% | |
GCCGATTAAAGAAGGTGAGA+TGG | - | chr4.2:4661214-4661233 | MS.gene048911:intron | 45.0% | |
GTAATGGCTTGAACAAGCTG+AGG | - | chr4.2:4660145-4660164 | MS.gene048911:intron | 45.0% | |
TCTGGTCTCAAAAGCGAAAG+TGG | + | chr4.2:4661350-4661369 | None:intergenic | 45.0% | |
TCTTGTCCAATCCGATTCTC+AGG | + | chr4.2:4659852-4659871 | None:intergenic | 45.0% | |
TGAAATTGCCTGTATGGACC+CGG | + | chr4.2:4661380-4661399 | None:intergenic | 45.0% | |
TGCATAATTGACTAGACCGG+TGG | + | chr4.2:4660306-4660325 | None:intergenic | 45.0% | |
! | AAGAAGTTTGAGGTGGGGTT+TGG | + | chr4.2:4658806-4658825 | None:intergenic | 45.0% |
! | AGAAGTTTGAGGTGGGGTTT+GGG | + | chr4.2:4658805-4658824 | None:intergenic | 45.0% |
! | ATCGGATTGGACAAGAACTC+TGG | - | chr4.2:4659856-4659875 | MS.gene048911:intron | 45.0% |
! | TCGGATTGGACAAGAACTCT+GGG | - | chr4.2:4659857-4659876 | MS.gene048911:intron | 45.0% |
!!! | CTTTCGCTTTTGAGACCAGA+TGG | - | chr4.2:4661350-4661369 | MS.gene048911:CDS | 45.0% |
!!! | TTTTTGGCTGATGCGTTGAC+CGG | - | chr4.2:4659508-4659527 | MS.gene048911:intron | 45.0% |
AATGGAGAGTGGTTTAGCGG+CGG | - | chr4.2:4661173-4661192 | MS.gene048911:intron | 50.0% | |
CGGTGGCAACTATACGTGTA+TGG | + | chr4.2:4660289-4660308 | None:intergenic | 50.0% | |
CTTGCTCTGCACGCTTTCTA+AGG | - | chr4.2:4659309-4659328 | MS.gene048911:CDS | 50.0% | |
GCCAGTTACAAGTCCTAGAC+TGG | - | chr4.2:4660167-4660186 | MS.gene048911:intron | 50.0% | |
GGTAAAGTGTGGGCGCTTAT+TGG | - | chr4.2:4659256-4659275 | MS.gene048911:CDS | 50.0% | |
TGCAGAGCAAGGACTGAACA+TGG | + | chr4.2:4659300-4659319 | None:intergenic | 50.0% | |
! | ATGTTACTGACCAGTGTCGG+TGG | + | chr4.2:4658889-4658908 | None:intergenic | 50.0% |
! | CTTAGAAAGCGTGCAGAGCA+AGG | + | chr4.2:4659311-4659330 | None:intergenic | 50.0% |
! | GAAGTTTGAGGTGGGGTTTG+GGG | + | chr4.2:4658804-4658823 | None:intergenic | 50.0% |
! | GCCAGTCTAGGACTTGTAAC+TGG | + | chr4.2:4660171-4660190 | None:intergenic | 50.0% |
! | GTTTGCATTGGTGCTTGCCT+GGG | - | chr4.2:4661441-4661460 | MS.gene048911:CDS | 50.0% |
! | GTTTGGGGTTCAGTGAGAGT+GGG | + | chr4.2:4658789-4658808 | None:intergenic | 50.0% |
! | TGTTTGCATTGGTGCTTGCC+TGG | - | chr4.2:4661440-4661459 | MS.gene048911:CDS | 50.0% |
! | TTTGAGACCAGATGGGCATC+CGG | - | chr4.2:4661358-4661377 | MS.gene048911:CDS | 50.0% |
!! | GCGTTGACCGGATCTTGTTT+TGG | - | chr4.2:4659520-4659539 | MS.gene048911:intron | 50.0% |
!! | TGTTACTGACCAGTGTCGGT+GGG | + | chr4.2:4658888-4658907 | None:intergenic | 50.0% |
!!! | CGAAGGAAAGTGCCAGCTTT+TGG | + | chr4.2:4660784-4660803 | None:intergenic | 50.0% |
TTCCAGGAGTCTATAGGCCC+AGG | + | chr4.2:4661461-4661480 | None:intergenic | 55.0% | |
TTGAGACCAGATGGGCATCC+GGG | - | chr4.2:4661359-4661378 | MS.gene048911:CDS | 55.0% | |
! | GGTTTGGGGTTCAGTGAGAG+TGG | + | chr4.2:4658790-4658809 | None:intergenic | 55.0% |
ATGGGCATCCGGGTCCATAC+AGG | - | chr4.2:4661369-4661388 | MS.gene048911:CDS | 60.0% | |
CAACTCTCTCCCACCGACAC+TGG | - | chr4.2:4658876-4658895 | MS.gene048911:CDS | 60.0% | |
TATGGACCCGGATGCCCATC+TGG | + | chr4.2:4661368-4661387 | None:intergenic | 60.0% | |
TGCCTGGGCCTATAGACTCC+TGG | - | chr4.2:4661456-4661475 | MS.gene048911:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 4658675 | 4661514 | 4658675 | ID=MS.gene048911 |
chr4.2 | mRNA | 4658675 | 4661514 | 4658675 | ID=MS.gene048911.t1;Parent=MS.gene048911 |
chr4.2 | exon | 4661292 | 4661514 | 4661292 | ID=MS.gene048911.t1.exon1;Parent=MS.gene048911.t1 |
chr4.2 | CDS | 4661292 | 4661514 | 4661292 | ID=cds.MS.gene048911.t1;Parent=MS.gene048911.t1 |
chr4.2 | exon | 4660859 | 4661136 | 4660859 | ID=MS.gene048911.t1.exon2;Parent=MS.gene048911.t1 |
chr4.2 | CDS | 4660859 | 4661136 | 4660859 | ID=cds.MS.gene048911.t1;Parent=MS.gene048911.t1 |
chr4.2 | exon | 4658675 | 4659451 | 4658675 | ID=MS.gene048911.t1.exon3;Parent=MS.gene048911.t1 |
chr4.2 | CDS | 4658675 | 4659451 | 4658675 | ID=cds.MS.gene048911.t1;Parent=MS.gene048911.t1 |
Gene Sequence |
Protein sequence |