AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45473


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45473.t1 MTR_2g096380 97.034 236 7 0 1 236 1 236 2.30e-174 479
MS.gene45473.t1 MTR_2g096380 94.608 204 11 0 33 236 14 217 4.96e-145 404
MS.gene45473.t1 MTR_2g096380 96.532 173 6 0 64 236 1 173 4.48e-123 347
MS.gene45473.t1 MTR_4g063100 57.752 258 68 8 1 233 2 243 2.99e-89 264
MS.gene45473.t1 MTR_4g063100 53.097 226 65 8 33 233 5 214 3.87e-64 199
MS.gene45473.t1 MTR_1g045610 64.286 112 40 0 1 112 16 127 2.69e-49 162
MS.gene45473.t1 MTR_1g062940 64.151 106 38 0 6 111 6 111 4.12e-48 158
MS.gene45473.t1 MTR_1g110460 61.468 109 42 0 3 111 23 131 2.60e-47 159
MS.gene45473.t1 MTR_1g073170 62.264 106 40 0 7 112 21 126 4.51e-46 154
MS.gene45473.t1 MTR_1g086530 59.633 109 44 0 6 114 33 141 8.61e-46 154
MS.gene45473.t1 MTR_7g035075 60.577 104 41 0 5 108 13 116 3.88e-45 150
MS.gene45473.t1 MTR_4g063100 50.000 196 55 9 64 233 1 179 6.41e-45 149
MS.gene45473.t1 MTR_6g006030 60.577 104 41 0 5 108 13 116 7.15e-45 149
MS.gene45473.t1 MTR_1g086510 58.716 109 45 0 6 114 21 129 2.29e-42 145
MS.gene45473.t1 MTR_4g102380 56.000 125 52 2 6 130 12 133 4.35e-42 144
MS.gene45473.t1 MTR_5g078140 50.758 132 63 1 6 137 12 141 2.22e-40 141
MS.gene45473.t1 MTR_5g029840 56.897 116 48 1 6 121 12 125 2.35e-40 141
MS.gene45473.t1 MTR_3g065440 53.125 128 56 2 6 133 12 135 8.94e-40 139
MS.gene45473.t1 MTR_7g115650 40.351 171 98 2 6 172 12 182 1.69e-39 135
MS.gene45473.t1 MTR_1g112760 40.571 175 97 3 3 172 10 182 7.86e-39 134
MS.gene45473.t1 MTR_4g073420 46.980 149 70 2 8 149 14 160 1.02e-38 135
MS.gene45473.t1 MTR_3g097450 49.612 129 62 2 3 131 9 134 1.16e-38 136
MS.gene45473.t1 MTR_3g074520 57.692 104 44 0 6 109 12 115 2.24e-38 136
MS.gene45473.t1 MTR_4g100720 54.128 109 50 0 2 110 9 117 2.26e-38 132
MS.gene45473.t1 MTR_8g027345 51.639 122 59 0 2 123 8 129 3.34e-38 135
MS.gene45473.t1 MTR_2g033170 57.273 110 47 0 5 114 23 132 4.81e-38 135
MS.gene45473.t1 MTR_3g039990 55.769 104 46 0 6 109 13 116 7.20e-38 134
MS.gene45473.t1 MTR_0251s0050 42.000 150 84 1 6 155 13 159 7.35e-38 133
MS.gene45473.t1 MTR_7g087130 48.800 125 64 0 6 130 12 136 1.08e-37 134
MS.gene45473.t1 MTR_3g077110 47.287 129 66 1 3 131 9 135 1.27e-37 134
MS.gene45473.t1 MTR_5g079670 52.336 107 51 0 3 109 8 114 1.50e-37 130
MS.gene45473.t1 MTR_7g010210 50.877 114 56 0 3 116 9 122 1.59e-37 134
MS.gene45473.t1 MTR_7g010210 50.435 115 57 0 3 117 9 123 1.83e-37 132
MS.gene45473.t1 MTR_4g091490 53.846 104 48 0 6 109 13 116 3.08e-37 134
MS.gene45473.t1 MTR_2g089620 53.846 104 48 0 6 109 12 115 3.87e-37 132
MS.gene45473.t1 MTR_0008s0390 54.206 107 49 0 6 112 13 119 4.23e-37 131
MS.gene45473.t1 MTR_7g117730 51.818 110 53 0 6 115 12 121 5.91e-37 130
MS.gene45473.t1 MTR_8g017440 49.153 118 58 1 3 120 9 124 6.65e-37 132
MS.gene45473.t1 MTR_0140s0030 53.846 104 48 0 6 109 13 116 6.90e-37 132
MS.gene45473.t1 MTR_0489s0020 53.846 104 48 0 6 109 13 116 6.90e-37 132
MS.gene45473.t1 MTR_2g099740 41.304 138 79 1 3 140 9 144 9.48e-37 133
MS.gene45473.t1 MTR_8g031360 56.190 105 45 1 6 109 13 117 1.12e-36 130
MS.gene45473.t1 MTR_2g011660 54.808 104 47 0 6 109 13 116 1.22e-36 132
MS.gene45473.t1 MTR_7g076740 53.271 107 49 1 6 111 12 118 1.94e-36 130
MS.gene45473.t1 MTR_4g123040 55.455 110 49 0 5 114 23 132 2.10e-36 130
MS.gene45473.t1 MTR_4g478180 54.808 104 47 0 6 109 13 116 2.57e-36 131
MS.gene45473.t1 MTR_7g096930 47.967 123 56 1 6 128 12 126 2.83e-36 129
MS.gene45473.t1 MTR_2g067420 55.446 101 45 0 5 105 13 113 3.63e-36 130
MS.gene45473.t1 MTR_8g095390 48.760 121 60 1 3 123 9 127 4.64e-36 129
MS.gene45473.t1 MTR_3g052430 42.667 150 80 2 6 153 41 186 4.76e-36 134
MS.gene45473.t1 MTR_4g485530 50.000 122 57 2 8 129 14 131 4.78e-36 126
MS.gene45473.t1 MTR_1g100653 52.830 106 50 0 6 111 12 117 5.32e-36 129
MS.gene45473.t1 MTR_3g083540 55.769 104 46 0 6 109 41 144 5.36e-36 129
MS.gene45473.t1 MTR_4g082290 50.847 118 55 1 6 123 12 126 5.42e-36 131
MS.gene45473.t1 MTR_2g034790 53.846 104 48 0 6 109 12 115 6.14e-36 130
MS.gene45473.t1 MTR_6g055910 45.833 144 67 2 7 150 15 147 6.82e-36 128
MS.gene45473.t1 MTR_0008s0470 52.336 107 51 0 6 112 13 119 7.44e-36 128
MS.gene45473.t1 MTR_5g007370 48.760 121 59 1 6 123 12 132 7.83e-36 129
MS.gene45473.t1 MTR_7g110830 52.252 111 53 0 3 113 9 119 8.60e-36 130
MS.gene45473.t1 MTR_1g043080 53.846 104 48 0 6 109 12 115 1.11e-35 127
MS.gene45473.t1 MTR_8g098860 50.459 109 54 0 3 111 9 117 1.21e-35 129
MS.gene45473.t1 MTR_7g011170 51.724 116 54 1 6 121 12 125 1.22e-35 128
MS.gene45473.t1 MTR_4g125520 52.252 111 53 0 2 112 8 118 1.29e-35 128
MS.gene45473.t1 MTR_8g020490 52.778 108 51 0 4 111 6 113 1.41e-35 127
MS.gene45473.t1 MTR_4g082230 42.759 145 80 1 6 150 12 153 1.55e-35 130
MS.gene45473.t1 MTR_2g064160 46.296 108 58 0 2 109 7 114 1.98e-35 128
MS.gene45473.t1 MTR_1g085040 48.739 119 59 1 3 121 9 125 2.62e-35 129
MS.gene45473.t1 MTR_1g076150 53.846 104 48 0 6 109 12 115 3.32e-35 126
MS.gene45473.t1 MTR_3g461490 52.336 107 51 0 3 109 9 115 3.37e-35 127
MS.gene45473.t1 MTR_4g065017 44.286 140 65 1 2 141 13 139 4.31e-35 127
MS.gene45473.t1 MTR_3g028740 51.351 111 54 0 1 111 17 127 5.35e-35 127
MS.gene45473.t1 MTR_6g009430 43.590 156 80 3 6 161 12 159 5.64e-35 127
MS.gene45473.t1 MTR_3g011610 53.774 106 49 0 6 111 37 142 6.89e-35 130
MS.gene45473.t1 MTR_0008s0280 51.351 111 52 1 6 114 12 122 6.97e-35 124
MS.gene45473.t1 MTR_4g105130 49.580 119 58 1 3 121 9 125 1.00e-34 127
MS.gene45473.t1 MTR_2g089450 39.444 180 102 2 6 178 12 191 1.00e-34 124
MS.gene45473.t1 MTR_8g017390 50.926 108 52 1 3 109 9 116 1.10e-34 129
MS.gene45473.t1 MTR_8g017540 48.598 107 55 0 3 109 55 161 1.28e-34 127
MS.gene45473.t1 MTR_1g043050 50.459 109 54 0 6 114 12 120 1.41e-34 124
MS.gene45473.t1 MTR_1g085640 50.450 111 55 0 3 113 9 119 1.81e-34 127
MS.gene45473.t1 MTR_8g042410 53.846 104 48 0 6 109 37 140 2.17e-34 129
MS.gene45473.t1 MTR_3g052450 46.094 128 63 2 6 131 40 163 2.20e-34 129
MS.gene45473.t1 MTR_6g012180 53.398 103 48 0 3 105 9 111 2.38e-34 125
MS.gene45473.t1 MTR_1g100667 52.885 104 49 0 7 110 14 117 2.70e-34 124
MS.gene45473.t1 MTR_4g029540 34.361 227 141 5 6 227 10 233 3.08e-34 124
MS.gene45473.t1 MTR_2g097910 47.826 115 60 0 6 120 20 134 3.30e-34 125
MS.gene45473.t1 MTR_8g017340 49.541 109 54 1 2 109 8 116 4.29e-34 127
MS.gene45473.t1 MTR_8g017500 46.789 109 58 0 3 111 9 117 4.55e-34 125
MS.gene45473.t1 MTR_5g010020 46.032 126 64 1 3 124 9 134 4.74e-34 125
MS.gene45473.t1 MTR_6g012690 50.000 116 56 1 6 121 12 125 5.04e-34 125
MS.gene45473.t1 MTR_4g121460 52.885 104 49 0 6 109 12 115 8.99e-34 124
MS.gene45473.t1 MTR_2g089420 50.435 115 54 1 6 117 11 125 1.01e-33 126
MS.gene45473.t1 MTR_1g021230 49.123 114 54 1 6 119 57 166 1.73e-33 125
MS.gene45473.t1 MTR_8g017350 48.624 109 55 1 2 109 8 116 1.89e-33 127
MS.gene45473.t1 MTR_8g006470 53.636 110 50 1 3 111 7 116 2.27e-33 122
MS.gene45473.t1 MTR_5g079120 34.247 219 119 5 6 215 61 263 2.29e-33 122
MS.gene45473.t1 MTR_1g017000 50.000 108 53 1 3 109 9 116 4.87e-33 120
MS.gene45473.t1 MTR_0063s0090 48.148 108 56 0 6 113 12 119 8.03e-33 119
MS.gene45473.t1 MTR_7g111290 53.000 100 47 0 3 102 9 108 1.31e-32 122
MS.gene45473.t1 MTR_2g088170 49.153 118 56 1 2 119 25 138 1.39e-32 123
MS.gene45473.t1 MTR_4g063100 46.629 178 52 9 82 233 6 166 2.93e-32 116
MS.gene45473.t1 MTR_8g060940 51.485 101 49 0 6 106 7 107 1.01e-31 116
MS.gene45473.t1 MTR_5g078910 49.524 105 53 0 6 110 7 111 1.66e-31 117
MS.gene45473.t1 MTR_5g079290 50.962 104 51 0 6 109 17 120 4.23e-31 115
MS.gene45473.t1 MTR_5g079220 50.000 104 52 0 6 109 21 124 8.65e-31 115
MS.gene45473.t1 MTR_0247s0040 51.961 102 49 0 6 107 7 108 1.68e-30 111
MS.gene45473.t1 MTR_5g078800 49.524 105 53 0 6 110 7 111 2.81e-30 113
MS.gene45473.t1 MTR_6g055910 47.458 118 51 2 33 150 12 118 3.33e-30 113
MS.gene45473.t1 MTR_5g042030 47.115 104 55 0 6 109 7 110 3.54e-30 114
MS.gene45473.t1 MTR_5g078950 49.020 102 52 0 6 107 7 108 3.58e-30 113
MS.gene45473.t1 MTR_5g014990 48.673 113 53 2 6 115 12 122 4.11e-30 114
MS.gene45473.t1 MTR_1g017140 49.550 111 55 1 6 115 12 122 5.67e-30 114
MS.gene45473.t1 MTR_3g103570 49.550 111 55 1 6 115 12 122 8.38e-30 114
MS.gene45473.t1 MTR_7g017260 47.748 111 56 1 6 114 25 135 1.23e-29 112
MS.gene45473.t1 MTR_7g102110 48.571 105 53 1 6 109 12 116 1.33e-29 112
MS.gene45473.t1 MTR_0001s0360 48.571 105 54 0 6 110 7 111 1.83e-29 111
MS.gene45473.t1 MTR_5g078860 47.619 105 55 0 6 110 7 111 2.01e-29 112
MS.gene45473.t1 MTR_0197s0010 48.485 99 51 0 11 109 6 104 2.49e-29 110
MS.gene45473.t1 MTR_0193s0090 49.515 103 52 0 6 108 7 109 3.68e-29 108
MS.gene45473.t1 MTR_1g083630 47.664 107 56 0 5 111 11 117 4.81e-29 114
MS.gene45473.t1 MTR_4g057635 38.255 149 87 2 6 153 12 156 5.89e-29 111
MS.gene45473.t1 MTR_6g090405 46.296 108 57 1 3 109 9 116 1.09e-28 108
MS.gene45473.t1 MTR_2g095520 50.000 100 49 1 6 104 12 111 1.09e-28 110
MS.gene45473.t1 MTR_4g019370 40.559 143 75 3 8 149 38 171 1.85e-28 110
MS.gene45473.t1 MTR_5g078930 44.444 117 61 1 7 119 10 126 2.09e-28 107
MS.gene45473.t1 MTR_5g088610 47.619 105 54 1 5 108 8 112 2.83e-28 110
MS.gene45473.t1 MTR_7g109320 41.667 144 73 1 6 138 12 155 3.82e-28 109
MS.gene45473.t1 MTR_4g097570 36.517 178 102 3 6 181 12 180 3.25e-27 106
MS.gene45473.t1 MTR_4g128670 50.000 100 49 1 6 104 12 111 5.54e-27 106
MS.gene45473.t1 MTR_5g088080 38.462 143 80 3 5 142 11 150 8.53e-27 104
MS.gene45473.t1 MTR_5g088150 38.462 143 80 3 5 142 11 150 8.53e-27 104
MS.gene45473.t1 MTR_5g488210 38.462 143 80 3 5 142 11 150 8.53e-27 104
MS.gene45473.t1 MTR_5g088640 39.855 138 75 3 5 137 11 145 1.04e-26 104
MS.gene45473.t1 MTR_5g062790 38.028 142 79 3 5 140 8 146 1.28e-26 104
MS.gene45473.t1 MTR_4g097570 36.667 180 100 4 6 181 12 181 1.87e-26 103
MS.gene45473.t1 MTR_5g488170 38.462 143 80 3 5 142 11 150 1.87e-26 102
MS.gene45473.t1 MTR_4g094982 42.157 102 58 1 8 109 5 105 1.50e-25 101
MS.gene45473.t1 MTR_7g061330 46.667 105 55 1 5 109 110 213 1.94e-25 104
MS.gene45473.t1 MTR_7g061330 36.000 100 62 2 8 106 61 159 2.23e-12 66.2
MS.gene45473.t1 MTR_7g461410 46.667 105 55 1 5 109 110 213 1.94e-25 104
MS.gene45473.t1 MTR_7g461410 36.000 100 62 2 8 106 61 159 2.23e-12 66.2
MS.gene45473.t1 MTR_7g061330 46.667 105 55 1 5 109 74 177 3.60e-25 103
MS.gene45473.t1 MTR_7g061330 36.000 100 62 2 8 106 25 123 3.20e-12 65.9
MS.gene45473.t1 MTR_5g070020 43.750 112 60 2 4 114 118 227 4.53e-25 101
MS.gene45473.t1 MTR_5g016510 45.098 102 55 1 8 109 5 105 4.71e-25 100
MS.gene45473.t1 MTR_7g037260 45.133 113 60 2 6 117 143 254 1.60e-24 100
MS.gene45473.t1 MTR_7g111290 64.179 67 24 0 37 103 1 67 1.82e-24 99.8
MS.gene45473.t1 MTR_3g101290 42.308 104 57 2 8 110 37 138 4.53e-24 96.3
MS.gene45473.t1 MTR_3g463400 44.444 108 57 2 8 114 133 238 6.24e-24 99.4
MS.gene45473.t1 MTR_6g015455 43.689 103 57 1 8 110 5 106 7.31e-24 100
MS.gene45473.t1 MTR_5g041570 43.925 107 57 2 8 113 134 238 1.55e-23 98.2
MS.gene45473.t1 MTR_3g045430 43.269 104 59 0 6 109 13 116 1.71e-23 96.3
MS.gene45473.t1 MTR_4g082040 42.991 107 58 2 8 113 105 209 3.55e-23 97.1
MS.gene45473.t1 MTR_5g049190 42.308 104 57 2 6 108 17 118 4.93e-23 94.0
MS.gene45473.t1 MTR_7g061550 40.708 113 64 2 11 121 10 121 6.75e-23 95.5
MS.gene45473.t1 MTR_7g451170 45.455 110 58 2 8 116 191 299 7.38e-23 96.3
MS.gene45473.t1 MTR_7g450950 42.000 100 57 1 8 107 157 255 1.35e-22 94.4
MS.gene45473.t1 MTR_3g110028 41.509 106 59 2 5 109 82 185 1.36e-22 96.3
MS.gene45473.t1 MTR_3g110028 35.000 100 63 2 8 106 33 131 3.30e-11 63.2
MS.gene45473.t1 MTR_5g082910 45.000 100 52 2 8 106 19 116 1.67e-22 93.6
MS.gene45473.t1 MTR_5g010650 45.098 102 55 1 1 102 103 203 5.21e-22 94.4
MS.gene45473.t1 MTR_1g026870 39.623 106 61 2 5 109 82 185 8.69e-22 94.0
MS.gene45473.t1 MTR_1g026870 36.000 100 62 2 8 106 33 131 8.89e-12 64.7
MS.gene45473.t1 MTR_4g105660 41.905 105 58 2 6 109 178 280 1.02e-21 93.2
MS.gene45473.t1 MTR_4g088015 41.071 112 65 1 6 117 219 329 4.43e-21 91.3
MS.gene45473.t1 MTR_3g077650 42.105 114 62 3 8 119 181 292 5.79e-21 90.9
MS.gene45473.t1 MTR_5g007300 50.649 77 38 0 6 82 64 140 6.97e-21 85.5
MS.gene45473.t1 MTR_6g027340 40.816 98 55 2 8 104 16 111 1.55e-20 86.3
MS.gene45473.t1 MTR_6g074860 44.444 99 54 1 8 106 4 101 2.22e-20 86.7
MS.gene45473.t1 MTR_6g027370 37.580 157 79 6 8 154 99 246 2.56e-20 88.6
MS.gene45473.t1 MTR_7g037130 41.593 113 64 2 6 117 143 254 8.62e-20 87.0
MS.gene45473.t1 MTR_3g089045 43.119 109 59 2 8 115 16 122 1.25e-19 85.9
MS.gene45473.t1 MTR_6g027360 39.604 101 58 2 5 104 75 173 1.95e-19 85.5
MS.gene45473.t1 MTR_4g128190 33.099 142 72 4 6 139 11 137 3.29e-19 83.6
MS.gene45473.t1 MTR_1g057980 40.196 102 60 1 6 107 78 178 3.39e-19 84.7
MS.gene45473.t1 MTR_7g035350 41.026 117 65 2 11 124 228 343 6.62e-19 85.1
MS.gene45473.t1 MTR_7g086960 40.187 107 61 2 8 113 89 193 6.89e-19 84.3
MS.gene45473.t1 MTR_5g038910 39.604 101 60 1 11 111 29 128 2.23e-18 83.6
MS.gene45473.t1 MTR_5g038910 39.604 101 60 1 11 111 29 128 2.25e-18 83.2
MS.gene45473.t1 MTR_1g085880 41.284 109 62 2 2 108 7 115 2.28e-17 77.8
MS.gene45473.t1 MTR_1g085770 41.284 109 62 2 2 108 7 115 5.06e-17 78.6
MS.gene45473.t1 MTR_8g468380 35.714 126 79 2 11 135 25 149 7.15e-17 79.3
MS.gene45473.t1 MTR_0023s0210 40.260 77 46 0 6 82 7 83 3.16e-15 68.9
MS.gene45473.t1 MTR_6g055910 54.348 46 21 0 64 109 2 47 6.85e-13 65.9
MS.gene45473.t1 MTR_4g063100 39.610 154 50 10 106 233 1 137 1.07e-12 63.9
MS.gene45473.t1 MTR_6g080360 37.500 120 65 4 6 118 528 644 1.99e-12 66.6
MS.gene45473.t1 MTR_6g080360 37.500 120 65 4 6 118 308 424 3.53e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45473.t1 AT3G46130 58.547 234 66 5 1 212 4 228 5.13e-84 251
MS.gene45473.t1 AT5G59780 59.817 219 69 5 1 212 3 209 2.76e-81 243
MS.gene45473.t1 AT3G46130 54.545 198 59 5 37 212 8 196 3.70e-61 191
MS.gene45473.t1 AT3G46130 54.592 196 58 5 39 212 20 206 1.64e-60 190
MS.gene45473.t1 AT5G59780 55.801 181 61 5 39 212 20 188 4.52e-56 178
MS.gene45473.t1 AT3G53200 43.256 215 91 4 3 189 6 217 3.57e-50 164
MS.gene45473.t1 AT4G13480 65.766 111 38 0 1 111 1 111 5.64e-50 164
MS.gene45473.t1 AT3G24310 65.455 110 38 0 2 111 14 123 2.86e-49 162
MS.gene45473.t1 AT3G27810 50.355 141 67 2 2 139 16 156 5.33e-48 158
MS.gene45473.t1 AT3G30210 62.712 118 39 1 6 118 27 144 4.08e-47 157
MS.gene45473.t1 AT2G47190 64.486 107 38 0 5 111 19 125 1.43e-46 155
MS.gene45473.t1 AT1G68320 62.037 108 41 0 4 111 17 124 3.52e-46 155
MS.gene45473.t1 AT1G48000 60.748 107 42 0 5 111 31 137 6.48e-46 153
MS.gene45473.t1 AT1G25340 61.682 107 41 0 5 111 17 123 5.49e-45 152
MS.gene45473.t1 AT5G40350 50.725 138 62 2 5 136 16 153 8.11e-45 149
MS.gene45473.t1 AT3G01530 51.587 126 61 0 6 131 25 150 4.90e-43 144
MS.gene45473.t1 AT2G31180 38.947 190 102 4 6 183 12 199 5.23e-41 140
MS.gene45473.t1 AT1G25340 55.462 119 45 2 5 123 17 127 1.92e-40 140
MS.gene45473.t1 AT5G10280 58.654 104 43 0 6 109 12 115 3.54e-40 141
MS.gene45473.t1 AT1G25340 58.879 107 39 1 5 111 17 118 3.89e-40 140
MS.gene45473.t1 AT3G23250 41.176 187 89 3 6 171 12 198 4.14e-40 139
MS.gene45473.t1 AT1G66230 42.632 190 89 4 6 179 12 197 4.66e-40 139
MS.gene45473.t1 AT1G79180 56.190 105 46 0 5 109 13 117 7.79e-40 139
MS.gene45473.t1 AT3G46130 47.953 171 58 5 64 212 1 162 9.84e-40 135
MS.gene45473.t1 AT4G22680 53.175 126 56 2 6 131 12 134 1.46e-39 137
MS.gene45473.t1 AT5G16600 45.122 164 84 3 6 165 12 173 2.03e-39 139
MS.gene45473.t1 AT1G06180 55.769 104 46 0 6 109 12 115 2.11e-39 136
MS.gene45473.t1 AT3G06490 57.273 110 47 0 5 114 18 127 3.09e-39 138
MS.gene45473.t1 AT4G12350 58.654 104 43 0 6 109 12 115 4.39e-39 137
MS.gene45473.t1 AT5G16770 57.692 104 44 0 6 109 12 115 2.75e-38 135
MS.gene45473.t1 AT5G16770 57.692 104 44 0 6 109 12 115 2.75e-38 135
MS.gene45473.t1 AT1G09540 43.017 179 91 4 3 181 9 176 3.45e-38 136
MS.gene45473.t1 AT4G38620 50.394 127 61 1 8 134 14 138 3.75e-38 134
MS.gene45473.t1 AT5G16770 57.692 104 44 0 6 109 12 115 4.16e-38 135
MS.gene45473.t1 AT5G16770 57.692 104 44 0 6 109 12 115 4.16e-38 135
MS.gene45473.t1 AT3G47600 50.806 124 60 1 6 129 12 134 6.42e-38 135
MS.gene45473.t1 AT5G65230 54.808 104 47 0 6 109 12 115 6.85e-38 134
MS.gene45473.t1 AT3G13540 51.515 132 61 2 6 137 23 151 7.91e-38 132
MS.gene45473.t1 AT5G49620 56.364 110 48 0 5 114 25 134 8.90e-38 134
MS.gene45473.t1 AT3G02940 57.692 104 44 0 6 109 12 115 9.12e-38 134
MS.gene45473.t1 AT5G52600 45.652 138 68 1 6 136 12 149 9.52e-38 131
MS.gene45473.t1 AT1G16490 53.846 104 48 0 6 109 14 117 1.08e-37 133
MS.gene45473.t1 AT1G08810 46.457 127 68 0 6 132 12 138 1.37e-37 133
MS.gene45473.t1 AT4G28110 54.808 104 47 0 6 109 12 115 1.48e-37 133
MS.gene45473.t1 AT3G02940 57.692 104 44 0 6 109 12 115 1.58e-37 134
MS.gene45473.t1 AT3G02940 57.692 104 44 0 6 109 12 115 1.58e-37 134
MS.gene45473.t1 AT4G34990 45.588 136 72 1 3 138 9 142 1.74e-37 132
MS.gene45473.t1 AT2G16720 51.200 125 58 2 3 127 9 130 1.81e-37 132
MS.gene45473.t1 AT4G05100 54.808 104 47 0 6 109 13 116 2.04e-37 133
MS.gene45473.t1 AT5G14750 39.665 179 106 1 5 181 15 193 2.30e-37 130
MS.gene45473.t1 AT4G17785 56.731 104 45 0 6 109 13 116 5.14e-37 133
MS.gene45473.t1 AT5G26660 49.167 120 59 1 3 122 9 126 5.57e-37 133
MS.gene45473.t1 AT2G32460 48.780 123 59 1 1 123 1 119 5.92e-37 135
MS.gene45473.t1 AT4G17785 56.731 104 45 0 6 109 13 116 7.07e-37 133
MS.gene45473.t1 AT5G62470 55.769 104 46 0 6 109 12 115 9.23e-37 132
MS.gene45473.t1 AT2G32460 50.000 118 55 1 6 123 18 131 1.03e-36 135
MS.gene45473.t1 AT3G13890 50.467 107 53 0 3 109 9 115 1.08e-36 132
MS.gene45473.t1 AT1G74650 55.238 105 47 0 5 109 11 115 1.14e-36 132
MS.gene45473.t1 AT1G57560 40.884 181 91 5 3 183 9 173 1.28e-36 131
MS.gene45473.t1 AT4G21440 55.769 104 46 0 6 109 12 115 1.46e-36 132
MS.gene45473.t1 AT3G28910 54.808 104 47 0 6 109 12 115 1.88e-36 131
MS.gene45473.t1 AT1G35515 51.261 119 56 1 3 121 9 125 2.08e-36 128
MS.gene45473.t1 AT5G54230 55.769 104 46 0 6 109 12 115 2.66e-36 130
MS.gene45473.t1 AT1G34670 54.808 104 47 0 6 109 12 115 3.75e-36 131
MS.gene45473.t1 AT1G18570 49.618 131 63 2 2 132 9 136 3.78e-36 130
MS.gene45473.t1 AT5G62320 48.889 135 59 2 6 133 13 144 5.50e-36 127
MS.gene45473.t1 AT3G01140 51.261 119 56 1 6 124 12 128 6.54e-36 130
MS.gene45473.t1 AT3G12820 51.402 107 52 0 3 109 11 117 6.65e-36 127
MS.gene45473.t1 AT1G57560 43.046 151 81 3 3 153 9 154 7.75e-36 128
MS.gene45473.t1 AT4G25560 54.717 106 48 0 4 109 8 113 8.38e-36 128
MS.gene45473.t1 AT3G61250 54.808 104 47 0 6 109 12 115 1.06e-35 128
MS.gene45473.t1 AT5G14340 51.639 122 56 2 6 127 24 142 1.11e-35 127
MS.gene45473.t1 AT4G26930 52.427 103 49 0 6 108 19 121 1.13e-35 130
MS.gene45473.t1 AT5G60890 45.238 126 66 1 3 128 9 131 1.32e-35 128
MS.gene45473.t1 AT5G07690 52.727 110 52 0 4 113 10 119 1.34e-35 129
MS.gene45473.t1 AT5G59780 48.718 156 61 5 64 212 1 144 1.39e-35 124
MS.gene45473.t1 AT5G40330 53.271 107 50 0 3 109 9 115 1.41e-35 126
MS.gene45473.t1 AT3G01140 51.261 119 56 1 6 124 55 171 1.43e-35 130
MS.gene45473.t1 AT1G22640 41.477 176 99 2 8 183 14 185 1.56e-35 127
MS.gene45473.t1 AT4G01680 50.420 119 57 1 3 121 9 125 1.79e-35 126
MS.gene45473.t1 AT1G56160 40.523 153 84 1 5 150 13 165 2.34e-35 127
MS.gene45473.t1 AT5G56110 53.271 107 50 0 3 109 9 115 2.58e-35 128
MS.gene45473.t1 AT4G09460 52.336 107 51 0 3 109 9 115 2.70e-35 125
MS.gene45473.t1 AT5G62470 55.769 104 45 1 6 109 12 114 3.55e-35 128
MS.gene45473.t1 AT5G61420 44.218 147 78 2 4 150 10 152 3.60e-35 128
MS.gene45473.t1 AT4G01680 50.420 119 57 1 3 121 9 125 4.84e-35 127
MS.gene45473.t1 AT3G27920 31.760 233 141 3 4 236 12 226 5.82e-35 124
MS.gene45473.t1 AT5G15310 52.885 104 49 0 6 109 12 115 6.23e-35 125
MS.gene45473.t1 AT3G28470 53.922 102 47 0 3 104 9 110 8.70e-35 126
MS.gene45473.t1 AT5G15310 52.885 104 49 0 6 109 12 115 8.93e-35 126
MS.gene45473.t1 AT5G07700 51.376 109 53 0 4 112 10 118 8.98e-35 127
MS.gene45473.t1 AT5G07700 51.376 109 53 0 4 112 10 118 8.98e-35 127
MS.gene45473.t1 AT5G15310 52.885 104 49 0 6 109 12 115 1.12e-34 126
MS.gene45473.t1 AT3G08500 42.593 162 88 2 3 164 27 183 1.46e-34 126
MS.gene45473.t1 AT5G52260 54.206 107 49 0 3 109 9 115 1.86e-34 124
MS.gene45473.t1 AT3G53200 41.341 179 74 4 39 189 9 184 2.44e-34 122
MS.gene45473.t1 AT2G26960 48.800 125 56 2 8 128 22 142 2.74e-34 127
MS.gene45473.t1 AT1G74430 49.138 116 57 1 6 121 12 125 3.76e-34 124
MS.gene45473.t1 AT5G49620 50.000 124 48 1 5 114 25 148 4.22e-34 125
MS.gene45473.t1 AT5G12870 50.926 108 53 0 4 111 16 123 4.52e-34 124
MS.gene45473.t1 AT5G35550 44.961 129 70 1 1 129 9 136 4.73e-34 123
MS.gene45473.t1 AT2G47460 52.727 110 52 0 6 115 12 121 5.65e-34 125
MS.gene45473.t1 AT1G63910 48.624 109 56 0 3 111 9 117 7.92e-34 125
MS.gene45473.t1 AT3G27810 51.923 104 47 2 39 139 4 107 9.45e-34 120
MS.gene45473.t1 AT1G79180 42.754 138 46 1 5 109 13 150 9.52e-34 124
MS.gene45473.t1 AT3G13890 46.552 116 53 1 3 109 9 124 9.97e-34 125
MS.gene45473.t1 AT5G06100 48.246 114 55 1 6 119 32 141 1.07e-33 126
MS.gene45473.t1 AT5G55020 52.427 103 49 0 6 108 26 128 1.08e-33 127
MS.gene45473.t1 AT3G48920 52.212 113 54 0 2 114 14 126 1.31e-33 122
MS.gene45473.t1 AT1G74080 42.038 157 84 2 4 155 10 164 1.66e-33 123
MS.gene45473.t1 AT3G60460 52.727 110 51 1 3 111 8 117 1.79e-33 122
MS.gene45473.t1 AT5G06100 48.246 114 55 1 6 119 32 141 3.02e-33 125
MS.gene45473.t1 AT5G06100 48.246 114 55 1 6 119 32 141 3.02e-33 125
MS.gene45473.t1 AT5G06100 48.246 114 55 1 6 119 32 141 3.02e-33 125
MS.gene45473.t1 AT5G06100 48.246 114 55 1 6 119 32 141 3.02e-33 125
MS.gene45473.t1 AT3G12720 42.969 128 70 2 2 129 18 142 3.06e-33 122
MS.gene45473.t1 AT3G11440 46.491 114 57 1 6 119 41 150 4.73e-33 124
MS.gene45473.t1 AT3G62610 51.923 104 50 0 6 109 12 115 6.09e-33 122
MS.gene45473.t1 AT3G11440 46.491 114 57 1 6 119 41 150 1.30e-32 124
MS.gene45473.t1 AT3G11440 46.491 114 57 1 6 119 41 150 1.30e-32 124
MS.gene45473.t1 AT3G11440 46.491 114 57 1 6 119 41 150 1.30e-32 124
MS.gene45473.t1 AT1G66370 50.926 108 53 0 6 113 8 115 1.71e-32 119
MS.gene45473.t1 AT5G40350 52.885 104 43 2 39 136 5 108 6.51e-32 115
MS.gene45473.t1 AT5G49330 51.923 104 50 0 6 109 12 115 8.08e-32 119
MS.gene45473.t1 AT4G01680 45.455 132 58 2 3 122 9 138 1.09e-31 119
MS.gene45473.t1 AT1G18710 45.690 116 61 1 6 121 12 125 1.79e-31 116
MS.gene45473.t1 AT5G57620 47.748 111 57 1 6 115 12 122 6.23e-31 117
MS.gene45473.t1 AT3G49690 49.558 113 52 2 6 115 12 122 1.46e-30 115
MS.gene45473.t1 AT5G23000 48.148 108 55 1 3 109 9 116 3.28e-30 114
MS.gene45473.t1 AT1G66380 52.885 104 49 0 6 109 8 111 1.03e-29 108
MS.gene45473.t1 AT5G65790 47.788 113 54 2 6 115 12 122 1.39e-29 114
MS.gene45473.t1 AT4G37780 48.182 110 56 1 6 114 12 121 3.56e-29 111
MS.gene45473.t1 AT1G56650 45.113 133 67 1 6 132 8 140 4.57e-29 110
MS.gene45473.t1 AT5G14750 37.821 156 90 2 33 181 4 159 2.96e-28 105
MS.gene45473.t1 AT3G47600 54.945 91 40 1 39 129 39 128 2.99e-28 109
MS.gene45473.t1 AT5G26660 57.831 83 33 1 39 121 14 94 3.29e-28 109
MS.gene45473.t1 AT1G66390 50.962 104 51 0 6 109 8 111 6.90e-28 107
MS.gene45473.t1 AT5G35550 48.571 105 53 1 25 129 36 139 1.43e-27 106
MS.gene45473.t1 AT2G26950 47.619 105 54 1 8 111 18 122 4.33e-27 107
MS.gene45473.t1 AT2G39880 45.794 107 55 2 8 113 50 154 4.55e-27 107
MS.gene45473.t1 AT3G09230 38.000 150 85 3 8 151 55 202 8.48e-27 106
MS.gene45473.t1 AT2G36890 46.729 107 52 2 6 109 12 116 1.41e-26 104
MS.gene45473.t1 AT2G36890 46.729 107 52 2 6 109 53 157 2.11e-26 104
MS.gene45473.t1 AT3G12820 61.765 68 26 0 42 109 2 69 4.90e-26 100
MS.gene45473.t1 AT5G02320 45.794 107 57 1 5 111 124 229 5.95e-26 105
MS.gene45473.t1 AT5G02320 37.000 100 61 2 8 106 75 173 2.77e-11 63.2
MS.gene45473.t1 AT5G02320 45.794 107 57 1 5 111 124 229 5.95e-26 105
MS.gene45473.t1 AT5G02320 37.000 100 61 2 8 106 75 173 2.77e-11 63.2
MS.gene45473.t1 AT3G55730 46.226 106 54 2 8 112 56 159 7.18e-26 104
MS.gene45473.t1 AT5G02320 45.794 107 57 1 5 111 64 169 8.77e-26 105
MS.gene45473.t1 AT5G02320 37.000 100 61 2 8 106 15 113 3.90e-11 62.8
MS.gene45473.t1 AT1G69560 41.593 113 63 2 2 113 101 211 3.63e-24 98.6
MS.gene45473.t1 AT1G69560 41.593 113 63 2 2 113 117 227 4.83e-24 98.6
MS.gene45473.t1 AT3G50060 43.137 102 57 1 8 109 6 106 6.50e-24 97.4
MS.gene45473.t1 AT3G09370 44.231 104 57 1 8 111 135 237 8.91e-24 99.4
MS.gene45473.t1 AT3G09370 39.000 100 59 2 8 106 83 181 1.69e-12 66.6
MS.gene45473.t1 AT3G09370 44.231 104 57 1 8 111 130 232 9.27e-24 99.4
MS.gene45473.t1 AT3G09370 39.000 100 59 2 8 106 78 176 1.75e-12 66.6
MS.gene45473.t1 AT3G27785 43.243 111 62 1 6 116 187 296 1.15e-23 98.6
MS.gene45473.t1 AT3G09370 44.231 104 57 1 8 111 143 245 1.56e-23 98.6
MS.gene45473.t1 AT3G09370 39.000 100 59 2 8 106 91 189 2.12e-12 66.2
MS.gene45473.t1 AT1G26780 43.396 106 57 2 8 112 98 201 2.83e-23 95.5
MS.gene45473.t1 AT1G26780 43.396 106 57 2 8 112 98 201 4.18e-23 96.3
MS.gene45473.t1 AT4G18770 42.056 107 61 1 8 114 217 322 5.05e-23 96.7
MS.gene45473.t1 AT5G11510 40.952 105 61 1 5 109 78 181 8.93e-23 97.1
MS.gene45473.t1 AT5G11510 36.000 100 62 2 8 106 29 127 1.04e-11 64.7
MS.gene45473.t1 AT5G11510 40.952 105 61 1 5 109 78 181 8.93e-23 97.1
MS.gene45473.t1 AT5G11510 36.000 100 62 2 8 106 29 127 1.04e-11 64.7
MS.gene45473.t1 AT5G11510 40.952 105 61 1 5 109 78 181 8.93e-23 97.1
MS.gene45473.t1 AT5G11510 36.000 100 62 2 8 106 29 127 1.04e-11 64.7
MS.gene45473.t1 AT1G17950 45.872 109 56 2 8 115 5 111 8.97e-23 93.6
MS.gene45473.t1 AT5G11510 40.952 105 61 1 5 109 78 181 1.06e-22 96.7
MS.gene45473.t1 AT5G11510 36.000 100 62 2 8 106 29 127 9.90e-12 64.7
MS.gene45473.t1 AT5G58850 42.593 108 59 2 8 114 105 210 1.09e-22 95.9
MS.gene45473.t1 AT5G11510 40.952 105 61 1 5 109 78 181 1.10e-22 96.7
MS.gene45473.t1 AT5G11510 36.000 100 62 2 8 106 29 127 9.26e-12 64.7
MS.gene45473.t1 AT5G11050 41.818 110 61 2 6 114 103 210 1.14e-22 95.9
MS.gene45473.t1 AT2G23290 44.660 103 56 1 8 110 13 114 1.32e-22 94.0
MS.gene45473.t1 AT5G67300 36.054 147 90 3 8 151 6 151 1.35e-22 94.0
MS.gene45473.t1 AT2G25230 34.247 146 93 3 1 145 19 162 2.39e-22 92.0
MS.gene45473.t1 AT3G23250 36.129 155 72 4 52 185 1 149 3.08e-22 91.7
MS.gene45473.t1 AT5G17800 40.741 108 63 1 8 115 93 199 3.43e-22 93.2
MS.gene45473.t1 AT1G66380 59.211 76 31 0 34 109 3 78 6.71e-22 87.4
MS.gene45473.t1 AT2G37630 41.509 106 60 1 11 114 7 112 7.12e-22 92.8
MS.gene45473.t1 AT4G32730 38.679 106 62 2 5 109 84 187 1.39e-21 93.6
MS.gene45473.t1 AT4G32730 34.000 100 64 2 8 106 35 133 4.38e-11 62.8
MS.gene45473.t1 AT4G32730 38.679 106 62 2 5 109 84 187 1.50e-21 93.6
MS.gene45473.t1 AT4G32730 34.000 100 64 2 8 106 35 133 5.46e-11 62.4
MS.gene45473.t1 AT4G32730 38.679 106 62 2 5 109 84 187 1.50e-21 93.6
MS.gene45473.t1 AT4G32730 34.000 100 64 2 8 106 35 133 5.46e-11 62.4
MS.gene45473.t1 AT4G32730 38.679 106 62 2 5 109 84 187 1.50e-21 93.6
MS.gene45473.t1 AT4G32730 34.000 100 64 2 8 106 35 133 5.46e-11 62.4
MS.gene45473.t1 AT4G32730 38.679 106 62 2 5 109 84 187 1.50e-21 93.6
MS.gene45473.t1 AT4G32730 34.000 100 64 2 8 106 35 133 5.46e-11 62.4
MS.gene45473.t1 AT4G37260 41.748 103 59 1 8 110 13 114 3.75e-21 90.5
MS.gene45473.t1 AT3G29020 39.623 106 63 1 8 113 65 169 1.63e-20 87.0
MS.gene45473.t1 AT4G33450 39.130 115 69 1 7 121 18 131 2.06e-20 87.0
MS.gene45473.t1 AT3G29020 39.623 106 63 1 8 113 67 171 2.50e-20 87.8
MS.gene45473.t1 AT1G73410 45.614 114 58 3 8 119 6 117 3.91e-20 86.3
MS.gene45473.t1 AT1G73410 45.614 114 58 3 8 119 6 117 7.90e-20 84.3
MS.gene45473.t1 AT5G40360 39.806 103 61 1 6 108 156 257 1.38e-19 86.7
MS.gene45473.t1 AT5G14750 34.848 132 84 1 52 181 1 132 1.94e-19 82.0
MS.gene45473.t1 AT5G14750 34.848 132 84 1 52 181 1 132 1.94e-19 82.0
MS.gene45473.t1 AT1G22640 39.394 132 76 2 52 183 1 128 2.12e-19 83.2
MS.gene45473.t1 AT5G39700 37.903 124 72 2 1 120 45 167 6.19e-19 81.6
MS.gene45473.t1 AT1G14350 33.588 131 75 2 11 141 28 146 2.11e-17 80.9
MS.gene45473.t1 AT1G14350 33.588 131 75 2 11 141 28 146 2.11e-17 80.9
MS.gene45473.t1 AT2G02820 40.196 102 58 2 11 111 33 132 9.82e-17 78.2
MS.gene45473.t1 AT2G02820 40.196 102 58 2 11 111 33 132 1.09e-16 79.0
MS.gene45473.t1 AT2G02820 40.196 102 58 2 11 111 33 132 1.31e-16 78.6
MS.gene45473.t1 AT1G18960 38.235 102 60 2 8 109 10 108 2.88e-16 76.6
MS.gene45473.t1 AT5G40430 35.780 109 66 3 1 108 47 152 3.65e-16 75.9
MS.gene45473.t1 AT1G66380 43.529 85 48 0 2 86 4 88 9.48e-16 71.2
MS.gene45473.t1 AT4G00540 39.091 110 61 4 6 111 101 208 3.34e-15 74.3
MS.gene45473.t1 AT1G71030 43.529 85 44 2 45 127 5 87 5.07e-15 71.2
MS.gene45473.t1 AT4G00540 39.091 110 61 4 6 111 99 206 5.67e-15 73.9
MS.gene45473.t1 AT1G71030 43.529 85 44 2 45 127 19 101 8.34e-15 70.9
MS.gene45473.t1 AT3G18100 39.394 99 57 2 6 103 383 479 1.94e-13 69.7
MS.gene45473.t1 AT3G18100 39.394 99 57 2 6 103 544 640 2.04e-13 69.7
MS.gene45473.t1 AT3G18100 39.394 99 57 2 6 103 496 592 2.41e-13 69.3
MS.gene45473.t1 AT3G18100 39.394 99 57 2 6 103 331 427 2.51e-13 69.3
MS.gene45473.t1 AT4G25560 56.522 46 20 0 64 109 2 47 1.31e-12 65.1
MS.gene45473.t1 AT1G14350 32.283 127 60 3 16 141 2 103 1.74e-12 66.6
MS.gene45473.t1 AT1G14350 32.283 127 60 3 16 141 2 103 1.74e-12 66.6

Find 52 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTCATTTGTTGGATTATT+TGG 0.164747 2.1:+7084131 MS.gene45473:CDS
ACTTTCTTCTCCTGCCTCTT+TGG 0.272221 2.1:-7084773 None:intergenic
TTCAATCCAAATGGGGAAAT+AGG 0.287893 2.1:+7084404 MS.gene45473:CDS
GACTTTATTGCTAAGGTATC+AGG 0.289393 2.1:+7084167 MS.gene45473:CDS
AACAAACCTATTTCCCCATT+TGG 0.293831 2.1:-7084410 None:intergenic
AAATTTCAATGGATGATATA+TGG 0.321782 2.1:+7084863 MS.gene45473:CDS
ATAGAACAGGTAAGAGTTGT+AGG 0.346136 2.1:+7084302 MS.gene45473:CDS
TTCAAATTGGTGTCATTTGT+TGG 0.371955 2.1:+7084122 MS.gene45473:CDS
GTAAGAGTTGTAGGTTAAGA+TGG 0.378264 2.1:+7084311 MS.gene45473:CDS
TCCTTGAGCTTCAATCCAAA+TGG 0.379743 2.1:+7084395 MS.gene45473:CDS
GTTGTAGGTTTGAATAGAAC+AGG 0.384006 2.1:+7084289 MS.gene45473:intron
ATAATGAGATCAAGAATTAT+TGG 0.389579 2.1:+7084665 MS.gene45473:CDS
AAGTCTTCTTGTTCTGTCCA+TGG 0.397521 2.1:-7084101 None:intergenic
TCCCATGATGAAGAAGTCTT+TGG 0.411009 2.1:-7084964 None:intergenic
ATAATTCCACAGATTCACTA+TGG 0.414461 2.1:+7084989 MS.gene45473:CDS
AGAACAAGAAGACTTCAAAT+TGG 0.433687 2.1:+7084109 MS.gene45473:CDS
CCTTGAGCTTCAATCCAAAT+GGG 0.439757 2.1:+7084396 MS.gene45473:CDS
TACCAAAGACTTCTTCATCA+TGG 0.446006 2.1:+7084962 MS.gene45473:CDS
GATTATTTGGAGACAGAAGA+TGG 0.449185 2.1:+7084144 MS.gene45473:CDS
TCAACACAAGTTAAACTAGT+AGG 0.455526 2.1:+7084823 MS.gene45473:CDS
AAATAAGGGTCATCACTCAT+AGG 0.461038 2.1:-7085048 None:intergenic
AGAAAGTATGTTATTCCCTA+TGG 0.470700 2.1:+7085023 MS.gene45473:CDS
CGAATTGCTCGCAAGCTACC+TGG 0.471502 2.1:+7084634 MS.gene45473:CDS
TAAGAGTTGTAGGTTAAGAT+GGG 0.483189 2.1:+7084312 MS.gene45473:CDS
ACCAAAGACTTCTTCATCAT+GGG 0.486633 2.1:+7084963 MS.gene45473:CDS
CACAGATTCACTATGGGTGA+TGG 0.505812 2.1:+7084996 MS.gene45473:CDS
ATCTCATTATCCGTTCGTCC+AGG 0.514441 2.1:-7084652 None:intergenic
CTTCATCCTGGTCTCAAAAG+AGG 0.517022 2.1:+7084343 MS.gene45473:CDS
TCATCACTCATAGGAGCCAT+AGG 0.518182 2.1:-7085039 None:intergenic
CCCATTTGGATTGAAGCTCA+AGG 0.522432 2.1:-7084396 None:intergenic
GCATGAACAAGAAATTTCAA+TGG 0.523842 2.1:+7084852 MS.gene45473:CDS
ATTGCATGGTGTTCTGTGGA+TGG 0.528562 2.1:-7084736 None:intergenic
TCACAAGCTTCCAAAGAGGC+AGG 0.544531 2.1:+7084763 MS.gene45473:CDS
TGGGTTAATTACCTTCATCC+TGG 0.551846 2.1:+7084331 MS.gene45473:CDS
AAGATGGGACTTTATTGCTA+AGG 0.557083 2.1:+7084160 MS.gene45473:CDS
TGGATTGAAGCTCAAGGACA+AGG 0.557783 2.1:-7084390 None:intergenic
ATTATTTGGAGACAGAAGAT+GGG 0.561647 2.1:+7084145 MS.gene45473:CDS
ATTCATTGCATGGTGTTCTG+TGG 0.564913 2.1:-7084740 None:intergenic
GAGAACTCACATGAGGAAGA+AGG 0.575400 2.1:+7084687 MS.gene45473:CDS
ACAGATTCACTATGGGTGAT+GGG 0.576749 2.1:+7084997 MS.gene45473:CDS
GCTCAAGAAGAAGTACGAAA+AGG 0.579020 2.1:+7084077 MS.gene45473:CDS
ATGGTGTTCTGTGGATGGAA+TGG 0.598490 2.1:-7084731 None:intergenic
CATCACCCATAGTGAATCTG+TGG 0.603502 2.1:-7084995 None:intergenic
AGGACAAGGCGTTCTTCATG+AGG 0.611340 2.1:-7084376 None:intergenic
TAATTCCACAGATTCACTAT+GGG 0.623047 2.1:+7084990 MS.gene45473:CDS
CATCACTCATAGGAGCCATA+GGG 0.624238 2.1:-7085038 None:intergenic
GAATTCACAAGCTTCCAAAG+AGG 0.627576 2.1:+7084759 MS.gene45473:CDS
AAGCTTGTGAATTCATTGCA+TGG 0.630600 2.1:-7084750 None:intergenic
AAGAAGTACGAAAAGGACCA+TGG 0.640168 2.1:+7084084 MS.gene45473:CDS
CTTGAGCTTCAATCCAAATG+GGG 0.663900 2.1:+7084397 MS.gene45473:CDS
TCGCAAGCTACCTGGACGAA+CGG 0.663975 2.1:+7084642 MS.gene45473:CDS
ATTATTGGAGAACTCACATG+AGG 0.687384 2.1:+7084680 MS.gene45473:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTCAATGGATGATATA+TGG + chr2.1:7084863-7084882 MS.gene45473:CDS 20.0%
!! ATAATGAGATCAAGAATTAT+TGG + chr2.1:7084665-7084684 MS.gene45473:CDS 20.0%
AGAACAAGAAGACTTCAAAT+TGG + chr2.1:7084109-7084128 MS.gene45473:CDS 30.0%
ATAATTCCACAGATTCACTA+TGG + chr2.1:7084989-7085008 MS.gene45473:CDS 30.0%
ATTATTTGGAGACAGAAGAT+GGG + chr2.1:7084145-7084164 MS.gene45473:CDS 30.0%
CAAACCTACAACAAAAATGA+GGG - chr2.1:7084281-7084300 None:intergenic 30.0%
GCATGAACAAGAAATTTCAA+TGG + chr2.1:7084852-7084871 MS.gene45473:CDS 30.0%
TAAGAGTTGTAGGTTAAGAT+GGG + chr2.1:7084312-7084331 MS.gene45473:CDS 30.0%
TAATTCCACAGATTCACTAT+GGG + chr2.1:7084990-7085009 MS.gene45473:CDS 30.0%
TAGCATAGCCAGAAAAATAA+GGG - chr2.1:7085065-7085084 None:intergenic 30.0%
TCAAACCTACAACAAAAATG+AGG - chr2.1:7084282-7084301 None:intergenic 30.0%
TCAACACAAGTTAAACTAGT+AGG + chr2.1:7084823-7084842 MS.gene45473:CDS 30.0%
TTAGCATAGCCAGAAAAATA+AGG - chr2.1:7085066-7085085 None:intergenic 30.0%
! AGAAAGTATGTTATTCCCTA+TGG + chr2.1:7085023-7085042 MS.gene45473:CDS 30.0%
! GAAGAAAGTTTTTATGACAC+AGG + chr2.1:7084787-7084806 MS.gene45473:CDS 30.0%
!! ACATCTAGGTAATGCTATTT+TGG + chr2.1:7084213-7084232 MS.gene45473:intron 30.0%
!! GTGTCATTTGTTGGATTATT+TGG + chr2.1:7084131-7084150 MS.gene45473:CDS 30.0%
!! TTAAATCCTTTGAGACATAC+AGG + chr2.1:7084605-7084624 MS.gene45473:intron 30.0%
!! TTCAAATTGGTGTCATTTGT+TGG + chr2.1:7084122-7084141 MS.gene45473:CDS 30.0%
AAATAAGGGTCATCACTCAT+AGG - chr2.1:7085051-7085070 None:intergenic 35.0%
AACAAACCTATTTCCCCATT+TGG - chr2.1:7084413-7084432 None:intergenic 35.0%
AAGATGGGACTTTATTGCTA+AGG + chr2.1:7084160-7084179 MS.gene45473:CDS 35.0%
AAGCTTGTGAATTCATTGCA+TGG - chr2.1:7084753-7084772 None:intergenic 35.0%
ACCAAAGACTTCTTCATCAT+GGG + chr2.1:7084963-7084982 MS.gene45473:CDS 35.0%
ATAGAACAGGTAAGAGTTGT+AGG + chr2.1:7084302-7084321 MS.gene45473:CDS 35.0%
ATTATTGGAGAACTCACATG+AGG + chr2.1:7084680-7084699 MS.gene45473:CDS 35.0%
GATTATTTGGAGACAGAAGA+TGG + chr2.1:7084144-7084163 MS.gene45473:CDS 35.0%
GTAAGAGTTGTAGGTTAAGA+TGG + chr2.1:7084311-7084330 MS.gene45473:CDS 35.0%
GTTGTAGGTTTGAATAGAAC+AGG + chr2.1:7084289-7084308 MS.gene45473:intron 35.0%
TACCAAAGACTTCTTCATCA+TGG + chr2.1:7084962-7084981 MS.gene45473:CDS 35.0%
TGAGGGTGGTTAAACTTAAA+AGG - chr2.1:7084264-7084283 None:intergenic 35.0%
TTAGCCTCCAAAGTACAAAA+GGG - chr2.1:7084584-7084603 None:intergenic 35.0%
TTCAATCCAAATGGGGAAAT+AGG + chr2.1:7084404-7084423 MS.gene45473:CDS 35.0%
! ATTAGCCTCCAAAGTACAAA+AGG - chr2.1:7084585-7084604 None:intergenic 35.0%
! GAAAGTTTTTATGACACAGG+AGG + chr2.1:7084790-7084809 MS.gene45473:CDS 35.0%
! GACTTTATTGCTAAGGTATC+AGG + chr2.1:7084167-7084186 MS.gene45473:CDS 35.0%
!!! AGTGATGACCCTTATTTTTC+TGG + chr2.1:7085054-7085073 MS.gene45473:CDS 35.0%
AAGGCTCAAGACAAAAAGAG+AGG + chr2.1:7084706-7084725 MS.gene45473:CDS 40.0%
AAGTCTTCTTGTTCTGTCCA+TGG - chr2.1:7084104-7084123 None:intergenic 40.0%
ACAGATTCACTATGGGTGAT+GGG + chr2.1:7084997-7085016 MS.gene45473:CDS 40.0%
ACCTACAACAAAAATGAGGG+TGG - chr2.1:7084278-7084297 None:intergenic 40.0%
ATCTCTCTCGCTTTACAAGT+CGG - chr2.1:7084534-7084553 None:intergenic 40.0%
ATTCATTGCATGGTGTTCTG+TGG - chr2.1:7084743-7084762 None:intergenic 40.0%
CCTTGAGCTTCAATCCAAAT+GGG + chr2.1:7084396-7084415 MS.gene45473:CDS 40.0%
CTTGAGCTTCAATCCAAATG+GGG + chr2.1:7084397-7084416 MS.gene45473:CDS 40.0%
GAATTCACAAGCTTCCAAAG+AGG + chr2.1:7084759-7084778 MS.gene45473:CDS 40.0%
TAGCCTCCAAAGTACAAAAG+GGG - chr2.1:7084583-7084602 None:intergenic 40.0%
TCCCATGATGAAGAAGTCTT+TGG - chr2.1:7084967-7084986 None:intergenic 40.0%
TCCTTGAGCTTCAATCCAAA+TGG + chr2.1:7084395-7084414 MS.gene45473:CDS 40.0%
TGGGTTAATTACCTTCATCC+TGG + chr2.1:7084331-7084350 MS.gene45473:CDS 40.0%
! AAGAAGTACGAAAAGGACCA+TGG + chr2.1:7084084-7084103 MS.gene45473:CDS 40.0%
! GCTCAAGAAGAAGTACGAAA+AGG + chr2.1:7084077-7084096 MS.gene45473:CDS 40.0%
! TAAGGTATCAGGTTTGAAGG+TGG + chr2.1:7084178-7084197 MS.gene45473:intron 40.0%
! TGCTAAGGTATCAGGTTTGA+AGG + chr2.1:7084175-7084194 MS.gene45473:intron 40.0%
! TTTCGACCCCTTTTGTACTT+TGG + chr2.1:7084574-7084593 MS.gene45473:intron 40.0%
!! AATCCTTTGAGACATACAGG+TGG + chr2.1:7084608-7084627 MS.gene45473:intron 40.0%
!! ACCACCCTCATTTTTGTTGT+AGG + chr2.1:7084274-7084293 MS.gene45473:intron 40.0%
!!! ATCTTTCCTCTTTTGAGACC+AGG - chr2.1:7084352-7084371 None:intergenic 40.0%
ACTTTCTTCTCCTGCCTCTT+TGG - chr2.1:7084776-7084795 None:intergenic 45.0%
ATCTCATTATCCGTTCGTCC+AGG - chr2.1:7084655-7084674 None:intergenic 45.0%
ATGGTGTTCTGTGGATGGAA+TGG - chr2.1:7084734-7084753 None:intergenic 45.0%
ATTGCATGGTGTTCTGTGGA+TGG - chr2.1:7084739-7084758 None:intergenic 45.0%
CACAGATTCACTATGGGTGA+TGG + chr2.1:7084996-7085015 MS.gene45473:CDS 45.0%
CATCACCCATAGTGAATCTG+TGG - chr2.1:7084998-7085017 None:intergenic 45.0%
CATCACTCATAGGAGCCATA+GGG - chr2.1:7085041-7085060 None:intergenic 45.0%
CCCATTTGGATTGAAGCTCA+AGG - chr2.1:7084399-7084418 None:intergenic 45.0%
CTTCATCCTGGTCTCAAAAG+AGG + chr2.1:7084343-7084362 MS.gene45473:CDS 45.0%
GAGAACTCACATGAGGAAGA+AGG + chr2.1:7084687-7084706 MS.gene45473:CDS 45.0%
TCATCACTCATAGGAGCCAT+AGG - chr2.1:7085042-7085061 None:intergenic 45.0%
TGACCACCTGTATGTCTCAA+AGG - chr2.1:7084614-7084633 None:intergenic 45.0%
TGGATTGAAGCTCAAGGACA+AGG - chr2.1:7084393-7084412 None:intergenic 45.0%
!!! CTCTTTTGAGACCAGGATGA+AGG - chr2.1:7084345-7084364 None:intergenic 45.0%
GGTATCAGGTTTGAAGGTGG+CGG + chr2.1:7084181-7084200 MS.gene45473:intron 50.0%
GTATCAGGTTTGAAGGTGGC+GGG + chr2.1:7084182-7084201 MS.gene45473:intron 50.0%
TCACAAGCTTCCAAAGAGGC+AGG + chr2.1:7084763-7084782 MS.gene45473:CDS 50.0%
! AGGACAAGGCGTTCTTCATG+AGG - chr2.1:7084379-7084398 None:intergenic 50.0%
! CGACCCCTTTTGTACTTTGG+AGG + chr2.1:7084577-7084596 MS.gene45473:intron 50.0%
CGAATTGCTCGCAAGCTACC+TGG + chr2.1:7084634-7084653 MS.gene45473:CDS 55.0%
GGCGGGAGACAGTAACATCT+AGG + chr2.1:7084199-7084218 MS.gene45473:intron 55.0%
TCGCAAGCTACCTGGACGAA+CGG + chr2.1:7084642-7084661 MS.gene45473:CDS 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 7084074 7085092 7084074 ID=MS.gene45473
chr2.1 mRNA 7084074 7085092 7084074 ID=MS.gene45473.t1;Parent=MS.gene45473
chr2.1 exon 7084074 7084188 7084074 ID=MS.gene45473.t1.exon1;Parent=MS.gene45473.t1
chr2.1 CDS 7084074 7084188 7084074 ID=cds.MS.gene45473.t1;Parent=MS.gene45473.t1
chr2.1 exon 7084296 7084425 7084296 ID=MS.gene45473.t1.exon2;Parent=MS.gene45473.t1
chr2.1 CDS 7084296 7084425 7084296 ID=cds.MS.gene45473.t1;Parent=MS.gene45473.t1
chr2.1 exon 7084627 7085092 7084627 ID=MS.gene45473.t1.exon3;Parent=MS.gene45473.t1
chr2.1 CDS 7084627 7085092 7084627 ID=cds.MS.gene45473.t1;Parent=MS.gene45473.t1
Gene Sequence

>MS.gene45473

ATGGCTCAAGAAGAAGTACGAAAAGGACCATGGACAGAACAAGAAGACTTCAAATTGGTGTCATTTGTTGGATTATTTGGAGACAGAAGATGGGACTTTATTGCTAAGGTATCAGGTTTGAAGGTGGCGGGAGACAGTAACATCTAGGTAATGCTATTTTGGACATGATAGTTTATGTAAGAAGCAACCTTTTAAGTTTAACCACCCTCATTTTTGTTGTAGGTTTGAATAGAACAGGTAAGAGTTGTAGGTTAAGATGGGTTAATTACCTTCATCCTGGTCTCAAAAGAGGAAAGATGACACCTCATGAAGAACGCCTTGTCCTTGAGCTTCAATCCAAATGGGGAAATAGGTTTGTTTTGTTGATATAATCTTCTAAGATGTAATCTTTTTTCAACGTGAAATTTGTCTGATGTTATATTTAGTTTCGTAATTAAGTTTATCTCAGTTAAAAAAACCGACTTGTAAAGCGAGAGAGATGTTCTTTTTCGTAAACAAATTTTCGACCCCTTTTGTACTTTGGAGGCTAATTTAAATCCTTTGAGACATACAGGTGGTCACGAATTGCTCGCAAGCTACCTGGACGAACGGATAATGAGATCAAGAATTATTGGAGAACTCACATGAGGAAGAAGGCTCAAGACAAAAAGAGAGGATCCATTCCATCCACAGAACACCATGCAATGAATTCACAAGCTTCCAAAGAGGCAGGAGAAGAAAGTTTTTATGACACAGGAGGATCATCAACTTCAACACAAGTTAAACTAGTAGGAGAAGAGCATGAACAAGAAATTTCAATGGATGATATATGGAAAGATATTGATCTATCAGAAGAGAATAGTCTACAGAATGAAGAGTGCTGCAATAATATTAATAACATATCTTGTTTACCAAAGACTTCTTCATCATGGGAGTATAATTCCACAGATTCACTATGGGTGATGGGTGAAGAAAGTATGTTATTCCCTATGGCTCCTATGAGTGATGACCCTTATTTTTCTGGCTATGCTAATTACTAA

Protein sequence

>MS.gene45473.t1

MAQEEVRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELQSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQDKKRGSIPSTEHHAMNSQASKEAGEESFYDTGGSSTSTQVKLVGEEHEQEISMDDIWKDIDLSEENSLQNEECCNNINNISCLPKTSSSWEYNSTDSLWVMGEESMLFPMAPMSDDPYFSGYANY